View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18602_low_10 (Length: 400)
Name: NF18602_low_10
Description: NF18602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18602_low_10 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 11 - 378
Target Start/End: Complemental strand, 46490518 - 46490151
Alignment:
| Q |
11 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46490518 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
46490419 |
T |
|
| Q |
111 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
210 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46490418 |
attcatggcgccaccagatttctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
46490319 |
T |
|
| Q |
211 |
tagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgcc |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46490318 |
tagtagctacacaatcttccatttggttggtgacatcgttgctctcatcgactcacttggcgttgaccgagtgtttcttgtagctcatgattggggtgcc |
46490219 |
T |
|
| Q |
311 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcc |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46490218 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcc |
46490151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 11 - 380
Target Start/End: Complemental strand, 46520746 - 46520377
Alignment:
| Q |
11 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
110 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
46520746 |
cacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaactctggt |
46520647 |
T |
|
| Q |
111 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || || || |
|
|
| T |
46520646 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccgcttcaat |
46520547 |
T |
|
| Q |
211 |
tagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgcc |
310 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
46520546 |
aagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggggtgcc |
46520447 |
T |
|
| Q |
311 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttccat |
380 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
46520446 |
atgattggttggtatctttgcatgtttcgccctgaaagaatcaaagcctatgtttgtcttagtgttccat |
46520377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 375
Target Start/End: Complemental strand, 46479316 - 46478952
Alignment:
| Q |
11 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
110 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
46479316 |
cacagaacggtggaagtgaatggcatcaaaatgcatattgcagagaaaggaaaagaaggtccagttgttttgttccttcacggcttccctgaactctggt |
46479217 |
T |
|
| Q |
111 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| || || || |
|
|
| T |
46479216 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgtgctgttgctccagatcttcgtggctacggcgacaccgatgctcccgcttcaat |
46479117 |
T |
|
| Q |
211 |
tagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgcc |
310 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
46479116 |
aagcagctacacaatcttccacttggtgggtgatatcgttgctctcatcgactcactcggcgttgaccaagtgttccttgtagctcatgattggggtgcc |
46479017 |
T |
|
| Q |
311 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgt |
375 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||| ||||||||| || || ||| ||||||| |
|
|
| T |
46479016 |
atgattggttggtatctttgtttatttcgccctgaaaaaatcaaagcttatgtttgtttgagtgt |
46478952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 379
Target Start/End: Complemental strand, 46524812 - 46524444
Alignment:
| Q |
11 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
110 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
46524812 |
cacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgtcttgttccttcatggcttcccagaactctggt |
46524713 |
T |
|
| Q |
111 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
210 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| | || | |
|
|
| T |
46524712 |
attcatggcgccaccagattgtagctctcagctccctcggctaccgtgctgttgctcccgatctccgtggctatggtgacaccgatgctccgtcttcagt |
46524613 |
T |
|
| Q |
211 |
tagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgcc |
310 |
Q |
| |
|
||||||||||||| || || | || ||||| | ||||| || || || | || || ||||| | |||||||||||| ||||||||||||||||| |
|
|
| T |
46524612 |
tagtagctacacaggttttcacatagtaggtgatcttgttgcacttatagattttctgggtgttgatcaagtgtttcttgttgctcatgattggggtgct |
46524513 |
T |
|
| Q |
311 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcca |
379 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| ||||||||| |
|
|
| T |
46524512 |
atcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
46524444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 14 - 380
Target Start/End: Original strand, 46326455 - 46326821
Alignment:
| Q |
14 |
agaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggtatt |
113 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||| | |
|
|
| T |
46326455 |
agaacagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttcacggctttcctgaactctggtact |
46326554 |
T |
|
| Q |
114 |
catggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccattag |
213 |
Q |
| |
|
| ||||||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||| |||| | |||||||| |
|
|
| T |
46326555 |
cttggcgccaccagattgcggctctcggatccctcggttaccgtgctgttgctcccgatctccgtggctatggtgacacagatgttccgtcttccattag |
46326654 |
T |
|
| Q |
214 |
tagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgccatc |
313 |
Q |
| |
|
||||||||| || || | ||||||||| | ||| |||||||||||| ||||| || || | ||| || ||||| | ||||||| |||||||||| |
|
|
| T |
46326655 |
cagctacacatgttttcacgtagttggtgacattgtttctctcatcgacttgcttggtgtggaacaagttttccttgttggtcatgatatgggtgccatc |
46326754 |
T |
|
| Q |
314 |
attggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttccat |
380 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||| |
|
|
| T |
46326755 |
attggttggtatctttgtatgtttcgccctgaaagaatcaaagcctatgtgtgcctcagtgttccat |
46326821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 379
Target Start/End: Complemental strand, 46532365 - 46531997
Alignment:
| Q |
11 |
cacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactctggt |
110 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
46532365 |
cacagaacagtggaggtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcttgttccttcatggcttcccagaactctggt |
46532266 |
T |
|
| Q |
111 |
attcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccat |
210 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| | || || |
|
|
| T |
46532265 |
attcatggcgccaccaaattgtagctcttggctccctcggttaccgcgccgttgctccagatctgcgtggctatggtgacaccgaggctccatcttcaat |
46532166 |
T |
|
| Q |
211 |
tagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgcc |
310 |
Q |
| |
|
|| |||||||| || || | || |||||| | ||||| || || || | ||||| ||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
46532165 |
aagcagctacactggttttcacattgtaggtgaccttgttgcacttatagatttgcttggtgttgaccaagtgtttcttgtggctcatgattggggtgct |
46532066 |
T |
|
| Q |
311 |
atcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcca |
379 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| ||||||||| |
|
|
| T |
46532065 |
atcattggttggtatctttgtatgtttcgccctgaaagaatcaaagcttatgtctgtctcagtgttcca |
46531997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 8 - 375
Target Start/End: Complemental strand, 46494819 - 46494452
Alignment:
| Q |
8 |
gagcacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactct |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
46494819 |
gagcacagaacagtggaagtgaatggaatcaaaatgcatattgctgaaaaaggaaaagaaggacctgttgtcctgttccttcacggattccctgaactct |
46494720 |
T |
|
| Q |
108 |
ggtattcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctc |
207 |
Q |
| |
|
|||| || ||||||||||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||||||||| || |||| || || |
|
|
| T |
46494719 |
ggtactcttggcgccaccagattgcggctctcggctctctcggttaccgggctgtggctcccgatcttcgtggttatggcgatactgatgtccccagttc |
46494620 |
T |
|
| Q |
208 |
cattagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggt |
307 |
Q |
| |
|
| | || || ||||||||||| |||||||||||| | ||||| ||||||||||| ||||| ||||| | ||| || ||||| ||||||||||||||| |
|
|
| T |
46494619 |
ggtaaacagttatacaatcttccacttggttggtgacattgttgcgctcatcgactcgcttggggttgatcaagtcttccttgtggctcatgattggggt |
46494520 |
T |
|
| Q |
308 |
gccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgt |
375 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| ||| | |||||||| |||||||| ||||| |
|
|
| T |
46494519 |
gccatcgttggttggtatctttgcttgtttcgccctgagagagttaaagcctatgtgtgtctcagtgt |
46494452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 380
Target Start/End: Original strand, 46322744 - 46323116
Alignment:
| Q |
8 |
gagcacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactct |
107 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||| |
|
|
| T |
46322744 |
gagcacagaagagtggaagtgaatggaatcaaaatgcatattgctgagaaaggtaaagaaggacctgttgttttgttccttcacggctttcctgaactct |
46322843 |
T |
|
| Q |
108 |
ggtattcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctc |
207 |
Q |
| |
|
|||| || ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| ||||| ||||| ||||| ||||| || ||||| | || |
|
|
| T |
46322844 |
ggtactcttggcgccaccagattgcggctctcggctctctcggctaccgcgccgtagctccggatctacgtggctatggtgacactgaggctccatcttc |
46322943 |
T |
|
| Q |
208 |
cattagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggt |
307 |
Q |
| |
|
|| || ||||||||| || || | || ||||| | ||||| || || || | ||||| ||||| | |||||||||||||||||||||||||||| |
|
|
| T |
46322944 |
aataagcagctacacaggttttcacattgtaggtgatctggttgcacttatagatttgcttggcgttgatcaagtgtttcttgtagctcatgattggggt |
46323043 |
T |
|
| Q |
308 |
gccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttccat |
380 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
46323044 |
gccatcattggttggtacctttgcatgtttcgccctgaaagaatcaaagcctatgtttgtctcagtgttccat |
46323116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 345
Target Start/End: Complemental strand, 46517108 - 46516771
Alignment:
| Q |
8 |
gagcacagaacagtggaagtgaatggcatcaaaatgcatattgctgagaaaggtaaagaaggacccgttgtcctgttccttcatggcttccctgaactct |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| | || |||||||| ||||||||||| | || ||||||||||||| || |||||| ||| |
|
|
| T |
46517108 |
gagcacagaacagtggaagtgaatggaatcaaaatgcatgtcgcagagaaaggaaaagaaggaccaatagtattgttccttcatggttttcctgaaatct |
46517009 |
T |
|
| Q |
108 |
ggtattcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctc |
207 |
Q |
| |
|
|||| ||||||||||||||||||| |||||| ||||||| || |||||| | || |||||||||||| |||| || || ||||| |||||||| | || |
|
|
| T |
46517008 |
ggtactcatggcgccaccagattgttgctctcagctcccttggctaccgcaccgtggctccagatctctgtggctacggtgacactgatgctcccacttc |
46516909 |
T |
|
| Q |
208 |
cattagtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggt |
307 |
Q |
| |
|
|||||||||||||||| || |||||||||||||| |||||||||| || |||||||| || || |||| ||| || ||||| ||||||||||||||| |
|
|
| T |
46516908 |
agttagtagctacacaattttacatttggttggtgatatcgttgctctaattgactcactgggtgtggaccaagttttccttgtggctcatgattggggt |
46516809 |
T |
|
| Q |
308 |
gccatcattggttggtatctttgtttgtttcgccctga |
345 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
46516808 |
gctatcattggttggtatctttgtttgtttcgtcctga |
46516771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 369
Target Start/End: Complemental strand, 46464985 - 46464833
Alignment:
| Q |
215 |
agctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgccatca |
314 |
Q |
| |
|
||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||| ||||| | ||| ||| |||| |||||||||||||||||| | | |
|
|
| T |
46464985 |
agctacacaatcttccacttagttggtgacatcgttgctctcatagactcacttggggttgatcaagtcttttttgttgctcatgattggggtgccttaa |
46464886 |
T |
|
| Q |
315 |
ttggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtct |
369 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| |||||||||| || ||||| |
|
|
| T |
46464885 |
ctggttggtatc--tgtttgtttcgtcctgaaagagtcaaagcctatgtttgtct |
46464833 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 378
Target Start/End: Original strand, 7475308 - 7475573
Alignment:
| Q |
113 |
tcatggcgccaccagattgctgctcttggctccctcggttaccgcgctgttgctccagatctccgtggttatggcgacaccgatgctccggcctccatta |
212 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||| |||| | || ||| | ||||||||||| ||||| ||||||||| |||| | || || | |
|
|
| T |
7475308 |
tcatggcgccaccagattatagctctcagctccctcggctaccatgtcgtggctactgatctccgtggctatggtgacaccgattctccatcttcaataa |
7475407 |
T |
|
| Q |
213 |
gtagctacacaatcttccatttggttggtgacgtcgttgctctcatcgactcacttggagttgaccgagtgtttcttgtagctcatgattggggtgccat |
312 |
Q |
| |
|
| ||||||||| || ||| ||||||||||| | ||||| || || || | ||||| ||||| | |||||||||||| |||||||||||||||||||| |
|
|
| T |
7475408 |
gcagctacacagggtttcatatggttggtgaccttgttgcacttatagattttcttggtgttgatcaagtgtttcttgtggctcatgattggggtgccat |
7475507 |
T |
|
| Q |
313 |
cattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttcc |
378 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
7475508 |
cattggttggtacctttgcacgtttcgccctgaaagaatcaaagcctatgtttgtctcagtgttcc |
7475573 |
T |
|
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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 88323 - 88407
Alignment:
| Q |
296 |
catgattggggtgccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttccat |
380 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| |||| |||| || || |||||| |||| ||||| || ||||| |||||||||| |
|
|
| T |
88323 |
catgattggggtgcaatcatcggttggtatgtttgcatgttccgaccagaaagagtcaaggcctatgtttgtcttagtgttccat |
88407 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 49833688 - 49833648
Alignment:
| Q |
89 |
catggcttccctgaactctggtattcatggcgccaccagat |
129 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
49833688 |
catggcttccctgatctatggtattcatggcgccaccagat |
49833648 |
T |
|
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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 37151907 - 37151823
Alignment:
| Q |
296 |
catgattggggtgccatcattggttggtatctttgtttgtttcgccctgaaagaatcaaagcctacgtgtgtctgagtgttccat |
380 |
Q |
| |
|
|||||||||||||| ||||| ||||||||| |||| |||| || || |||||| |||| ||||| || ||||| |||||||||| |
|
|
| T |
37151907 |
catgattggggtgcaatcatcggttggtatgtttgcatgttccgaccagaaagagtcaaggcctatgtttgtcttagtgttccat |
37151823 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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