View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18603_low_18 (Length: 291)
Name: NF18603_low_18
Description: NF18603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18603_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 4409083 - 4409280
Alignment:
| Q |
19 |
ttaccaacttgttttaaattttgctaaaaaagctaaaatgtttctttctgtatgcacctgctatgctatgaacagagagagagtgaaatatagcagtgat |
118 |
Q |
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| T |
4409083 |
ttaccaacttgttttaaattttgctaaaaaagctaaaatgtttctttctgtatgcacctgctatgctatgaacagagagagagtgaaatatagcagtgat |
4409182 |
T |
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| Q |
119 |
tcagataaatgatcagagagagagtgaaaagatgggccctctaaagcctgaaacagaaatgagtggcactgcaccaaacactatacactgtatcaatg |
216 |
Q |
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| T |
4409183 |
tcagataaatgatcagagagagagtgaaaagatgggccctctaaagcctgaaacagaaatgagtggcactgcaccaaacactatacactgtatcaatg |
4409280 |
T |
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