View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18604_high_13 (Length: 255)
Name: NF18604_high_13
Description: NF18604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18604_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 7423787 - 7423560
Alignment:
| Q |
15 |
atatatatcaggagccaaagtataaatttattacaaaacactaggtacagcatgtacctagtctgaaaagaaatctaagcaatcaacttattttataata |
114 |
Q |
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| T |
7423787 |
atatatatcaggagccaaagtataaatttattacaaaacactaggtacagcatgtacctagtctgaaaagaaatctaagcaatcaacttattttataata |
7423688 |
T |
|
| Q |
115 |
tattaattcataagtaagtgtagtctttgccatgcatcatgaataaaaagtaaccaatgctccaccaaccataaccgtcacctgtgtattaggccgcaaa |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7423687 |
tattaattcataagtaagtgtagtctttgccatgcatcatgaataaaaagtaaccaatgctccaccaaccataaccgtcacctgtgtattaggccgcaaa |
7423588 |
T |
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| Q |
215 |
agctaccatcggttgacaacttggcttc |
242 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
7423587 |
agctaccatcggttgacaacttggcttc |
7423560 |
T |
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