View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18606_high_3 (Length: 517)

Name: NF18606_high_3
Description: NF18606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18606_high_3
NF18606_high_3
[»] chr8 (29 HSPs)
chr8 (325-502)||(33963137-33963313)
chr8 (206-373)||(2952134-2952302)
chr8 (206-371)||(45475839-45476002)
chr8 (206-367)||(30883351-30883512)
chr8 (206-371)||(37430075-37430239)
chr8 (206-370)||(23606548-23606710)
chr8 (206-371)||(3048434-3048598)
chr8 (206-367)||(13534609-13534767)
chr8 (206-367)||(13624149-13624307)
chr8 (206-371)||(42600804-42600968)
chr8 (206-370)||(23798179-23798342)
chr8 (206-356)||(10917413-10917561)
chr8 (206-372)||(41879203-41879366)
chr8 (206-359)||(5860671-5860825)
chr8 (302-370)||(20003728-20003796)
chr8 (378-502)||(33954758-33954881)
chr8 (208-282)||(39332411-39332484)
chr8 (208-282)||(5973113-5973186)
chr8 (208-282)||(11290208-11290281)
chr8 (208-282)||(23941097-23941170)
chr8 (208-282)||(41677179-41677253)
chr8 (208-266)||(5942720-5942778)
chr8 (208-282)||(7944528-7944601)
chr8 (208-282)||(8646230-8646302)
chr8 (208-282)||(30674409-30674482)
chr8 (208-281)||(8102936-8103008)
chr8 (208-280)||(5721583-5721654)
chr8 (208-260)||(34789889-34789941)
chr8 (208-282)||(15167421-15167494)
[»] chr7 (30 HSPs)
chr7 (179-371)||(26253988-26254179)
chr7 (206-370)||(10329327-10329490)
chr7 (206-370)||(29077242-29077404)
chr7 (206-370)||(23550988-23551151)
chr7 (206-370)||(18776683-18776846)
chr7 (206-370)||(12596207-12596367)
chr7 (206-371)||(47984884-47985050)
chr7 (206-367)||(8171460-8171619)
chr7 (206-370)||(20091197-20091361)
chr7 (206-370)||(19692116-19692279)
chr7 (208-371)||(28749733-28749896)
chr7 (208-371)||(48983755-48983922)
chr7 (179-369)||(33162257-33162444)
chr7 (302-370)||(25010543-25010611)
chr7 (206-371)||(24525598-24525765)
chr7 (206-371)||(38414792-38414956)
chr7 (302-358)||(40357309-40357365)
chr7 (208-282)||(2611267-2611340)
chr7 (208-282)||(6765686-6765759)
chr7 (302-368)||(8239803-8239869)
chr7 (206-280)||(10955506-10955579)
chr7 (208-281)||(12981350-12981422)
chr7 (208-275)||(9021812-9021878)
chr7 (304-371)||(10955605-10955672)
chr7 (208-282)||(7398475-7398548)
chr7 (208-282)||(36902929-36903002)
chr7 (206-281)||(8239709-8239783)
chr7 (208-281)||(23859097-23859169)
chr7 (208-281)||(36891602-36891674)
chr7 (230-282)||(27237428-27237479)
[»] chr4 (49 HSPs)
chr4 (179-370)||(16922245-16922436)
chr4 (206-370)||(34027606-34027768)
chr4 (206-370)||(54780804-54780968)
chr4 (206-371)||(32128611-32128775)
chr4 (206-370)||(32915412-32915575)
chr4 (206-354)||(37777156-37777303)
chr4 (206-358)||(38209520-38209671)
chr4 (206-370)||(34768492-34768654)
chr4 (206-370)||(2790659-2790821)
chr4 (206-370)||(16845048-16845210)
chr4 (206-356)||(43455463-43455611)
chr4 (210-370)||(10428116-10428273)
chr4 (211-371)||(17679432-17679590)
chr4 (206-366)||(47129014-47129172)
chr4 (206-371)||(5128757-5128922)
chr4 (241-371)||(55255319-55255448)
chr4 (206-371)||(10978927-10979093)
chr4 (206-379)||(16882304-16882475)
chr4 (206-367)||(35779248-35779405)
chr4 (206-371)||(54083159-54083322)
chr4 (206-358)||(1105559-1105709)
chr4 (206-371)||(48209267-48209437)
chr4 (206-370)||(37514686-37514848)
chr4 (207-354)||(51964736-51964884)
chr4 (206-370)||(19498531-19498691)
chr4 (233-354)||(23508443-23508564)
chr4 (302-370)||(24969718-24969786)
chr4 (301-359)||(35465226-35465284)
chr4 (302-356)||(38352197-38352251)
chr4 (302-370)||(40089646-40089714)
chr4 (206-279)||(13460234-13460306)
chr4 (310-370)||(9578575-9578635)
chr4 (208-282)||(36178701-36178774)
chr4 (208-280)||(37744916-37744988)
chr4 (311-370)||(980336-980395)
chr4 (315-370)||(13460305-13460360)
chr4 (221-284)||(51691918-51691980)
chr4 (223-284)||(9578667-9578728)
chr4 (208-282)||(27112059-27112132)
chr4 (208-282)||(36118463-36118536)
chr4 (208-282)||(39655259-39655332)
chr4 (208-282)||(52468315-52468388)
chr4 (214-287)||(2135321-2135393)
chr4 (208-265)||(4167912-4167969)
chr4 (208-282)||(39329397-39329470)
chr4 (206-260)||(40089543-40089597)
chr4 (208-282)||(45656204-45656277)
chr4 (301-354)||(2975358-2975411)
chr4 (248-288)||(24969496-24969535)
[»] chr6 (20 HSPs)
chr6 (206-370)||(13727317-13727480)
chr6 (206-370)||(21280570-21280733)
chr6 (206-373)||(21479519-21479686)
chr6 (206-370)||(17353979-17354142)
chr6 (206-370)||(27788608-27788769)
chr6 (206-370)||(20711638-20711801)
chr6 (207-371)||(27314096-27314259)
chr6 (206-358)||(33774142-33774294)
chr6 (302-371)||(30832442-30832511)
chr6 (206-361)||(28075808-28075965)
chr6 (206-368)||(1155767-1155930)
chr6 (302-370)||(24710914-24710982)
chr6 (206-284)||(34397882-34397959)
chr6 (206-370)||(19737612-19737773)
chr6 (206-356)||(235157-235307)
chr6 (208-282)||(6159465-6159538)
chr6 (206-280)||(24711007-24711080)
chr6 (208-282)||(30121789-30121862)
chr6 (208-282)||(2477590-2477663)
chr6 (311-356)||(19987277-19987322)
[»] chr5 (31 HSPs)
chr5 (206-370)||(16198709-16198872)
chr5 (206-360)||(34756291-34756444)
chr5 (179-356)||(7337994-7338170)
chr5 (206-370)||(27079033-27079197)
chr5 (206-365)||(2274912-2275070)
chr5 (206-370)||(15480006-15480167)
chr5 (206-375)||(36187790-36187957)
chr5 (206-370)||(38869279-38869441)
chr5 (206-356)||(9364313-9364462)
chr5 (206-366)||(19523221-19523380)
chr5 (206-370)||(16591990-16592152)
chr5 (208-370)||(31194528-31194688)
chr5 (206-370)||(22986473-22986636)
chr5 (206-370)||(27924104-27924267)
chr5 (206-370)||(7670946-7671118)
chr5 (206-371)||(16799239-16799405)
chr5 (206-367)||(30854351-30854511)
chr5 (206-369)||(28822253-28822420)
chr5 (206-286)||(40389535-40389614)
chr5 (302-370)||(23283943-23284011)
chr5 (208-370)||(31881348-31881510)
chr5 (305-356)||(40389467-40389518)
chr5 (206-284)||(23284063-23284140)
chr5 (208-282)||(36868879-36868952)
chr5 (208-281)||(24395763-24395835)
chr5 (208-281)||(2530901-2530973)
chr5 (208-281)||(26718953-26719025)
chr5 (208-281)||(26988697-26988769)
chr5 (209-282)||(33037805-33037877)
chr5 (230-282)||(14318388-14318439)
chr5 (212-282)||(22648739-22648808)
[»] chr2 (29 HSPs)
chr2 (206-370)||(4505915-4506078)
chr2 (206-370)||(12337365-12337529)
chr2 (211-371)||(40636164-40636322)
chr2 (206-370)||(26716149-26716313)
chr2 (206-370)||(8906996-8907160)
chr2 (206-367)||(6965028-6965186)
chr2 (206-370)||(29939781-29939943)
chr2 (206-370)||(24410458-24410623)
chr2 (206-370)||(27506659-27506821)
chr2 (206-370)||(3155238-3155401)
chr2 (206-370)||(9046050-9046213)
chr2 (206-373)||(10762482-10762646)
chr2 (206-367)||(34693996-34694155)
chr2 (206-367)||(34716408-34716567)
chr2 (206-371)||(3953027-3953189)
chr2 (301-358)||(1396629-1396686)
chr2 (209-282)||(7742139-7742212)
chr2 (206-370)||(7162805-7162967)
chr2 (211-360)||(5952646-5952791)
chr2 (208-282)||(16097031-16097104)
chr2 (208-282)||(28425716-28425789)
chr2 (208-282)||(38400821-38400894)
chr2 (208-282)||(42029168-42029241)
chr2 (208-282)||(24035551-24035624)
chr2 (302-354)||(8327733-8327785)
chr2 (208-282)||(13800550-13800624)
chr2 (248-288)||(8327681-8327720)
chr2 (230-282)||(16227374-16227425)
chr2 (230-282)||(21665706-21665757)
[»] scaffold0039 (1 HSPs)
scaffold0039 (206-370)||(106560-106723)
[»] chr3 (35 HSPs)
chr3 (206-370)||(38681011-38681174)
chr3 (206-370)||(54619121-54619284)
chr3 (209-370)||(36715942-36716103)
chr3 (206-370)||(8073257-8073419)
chr3 (206-370)||(47467709-47467872)
chr3 (206-370)||(21582796-21582960)
chr3 (206-370)||(34290554-34290717)
chr3 (206-366)||(37168392-37168551)
chr3 (206-371)||(27078485-27078650)
chr3 (206-371)||(27084282-27084447)
chr3 (220-371)||(50258541-50258690)
chr3 (206-371)||(54407072-54407239)
chr3 (206-370)||(53506802-53506965)
chr3 (206-366)||(44708502-44708660)
chr3 (206-373)||(50939149-50939314)
chr3 (206-369)||(3953816-3953977)
chr3 (206-370)||(42098826-42098989)
chr3 (206-370)||(43207157-43207318)
chr3 (208-367)||(36605991-36606149)
chr3 (308-370)||(29620364-29620426)
chr3 (229-358)||(18372531-18372658)
chr3 (222-359)||(53149243-53149379)
chr3 (302-370)||(48720429-48720497)
chr3 (301-356)||(48157247-48157302)
chr3 (206-284)||(9878691-9878768)
chr3 (208-282)||(26279569-26279642)
chr3 (208-281)||(32319162-32319234)
chr3 (212-282)||(42453435-42453504)
chr3 (208-281)||(8420353-8420425)
chr3 (208-282)||(789963-790036)
chr3 (208-282)||(25855449-25855521)
chr3 (223-277)||(23641329-23641382)
chr3 (208-282)||(49393117-49393189)
chr3 (208-282)||(54574833-54574906)
chr3 (208-281)||(28689368-28689440)
[»] chr1 (36 HSPs)
chr1 (206-370)||(44655774-44655936)
chr1 (206-370)||(5027582-5027746)
chr1 (206-371)||(6771824-6771990)
chr1 (206-370)||(17168989-17169151)
chr1 (206-370)||(23185460-23185622)
chr1 (188-371)||(22865377-22865558)
chr1 (206-371)||(14146333-14146496)
chr1 (206-370)||(19955750-19955912)
chr1 (206-370)||(40501707-40501870)
chr1 (206-367)||(50881463-50881621)
chr1 (206-370)||(9172940-9173103)
chr1 (206-370)||(9180922-9181085)
chr1 (206-370)||(21740852-21741017)
chr1 (206-360)||(16140088-16140240)
chr1 (241-371)||(27906645-27906774)
chr1 (206-370)||(5316713-5316875)
chr1 (206-370)||(4971536-4971698)
chr1 (206-288)||(27559670-27559751)
chr1 (206-370)||(3406451-3406614)
chr1 (206-370)||(3440206-3440369)
chr1 (206-370)||(6889644-6889805)
chr1 (206-370)||(6891490-6891651)
chr1 (206-355)||(1366812-1366958)
chr1 (206-372)||(51607356-51607520)
chr1 (206-353)||(41697072-41697217)
chr1 (303-367)||(13913401-13913465)
chr1 (302-358)||(34247154-34247210)
chr1 (208-282)||(38547041-38547114)
chr1 (212-282)||(39134727-39134797)
chr1 (311-370)||(52127460-52127519)
chr1 (208-281)||(43235774-43235848)
chr1 (301-354)||(44895774-44895827)
chr1 (208-279)||(38853557-38853627)
chr1 (208-282)||(5533347-5533421)
chr1 (208-282)||(45758529-45758602)
chr1 (206-288)||(13913479-13913562)
[»] scaffold0070 (1 HSPs)
scaffold0070 (206-371)||(1365-1528)
[»] scaffold0001 (1 HSPs)
scaffold0001 (302-370)||(183176-183244)
[»] scaffold1590 (1 HSPs)
scaffold1590 (208-282)||(264-337)
[»] scaffold0182 (1 HSPs)
scaffold0182 (208-282)||(23999-24072)
[»] scaffold0012 (1 HSPs)
scaffold0012 (208-281)||(206496-206568)
[»] scaffold0097 (1 HSPs)
scaffold0097 (208-287)||(38949-39027)
[»] scaffold0003 (1 HSPs)
scaffold0003 (208-260)||(351361-351413)
[»] scaffold0018 (1 HSPs)
scaffold0018 (208-282)||(173516-173589)
[»] scaffold0022 (2 HSPs)
scaffold0022 (208-282)||(40109-40184)
scaffold0022 (208-282)||(138169-138244)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 9e-65; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 325 - 502
Target Start/End: Complemental strand, 33963313 - 33963137
Alignment:
Q  325 ttttcattcccagagccgagcctccgaattctcaggaacggccctgcatgtacatgcgcgtcaagaccagaaaagctaagacaaggcacggctatgaata 424  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  33963313 ttttcattctcaaagccgagcctccgaattctcatgaacggccctgcatgta-atgcacgttaagaccagaaaagctaagacaaggcacggctatgaata 33963215  T
Q  425 gggtgtaaggattaatttgtatgcaccattccggtatagttgtgttatcctgtgttacattgcatctaatcatgtatt 502  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||    
T  33963214 gggtgtaaggtttaatttgtatgcgccattcctgtataattgtgttatactgtattacattgcatctaatcatgtatt 33963137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 2952302 - 2952134
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct--ttttnnnnnnnnnnnntgt 303  Q
    ||||||||| || ||||||||| ||||||||| | ||| | |||||||||||||| |||||||||||||||||||||||  ||||            |||    
T  2952302 tcattttcatctctgggtgtaccgcatatatacggcactttgtatttatctttta-aaaaatataaatagaacattgctctttttaaaaaaaaattatgt 2952204  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcat 373  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  2952203 tttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctgcat 2952134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 45475839 - 45476002
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  45475839 tcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 45475936  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  45475937 tgattttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccctgc 45476002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 30883351 - 30883512
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| ||||||||| ||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||| ||||            ||||    
T  30883351 tcattttcacctctgggtgtaccgcatatatacggcacattgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaattatgtt 30883449  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  30883450 ttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 37430239 - 37430075
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| | ||||||  ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  37430239 tcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaaacgttt 37430141  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37430140 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctgc 37430075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 23606710 - 23606548
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  23606710 tcatttttacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 23606613  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  23606612 tgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctg 23606548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 3048598 - 3048434
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||| || | ||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||| | |||||| |||            |||||    
T  3048598 tcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagtatattgctcttttaaaaaaaattatgttt 3048500  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  3048499 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccctgc 3048434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 367
Target Start/End: Complemental strand, 13534767 - 13534609
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  13534767 tcattttcacctctgggtgtaccgcatatatacggcactt-gtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 13534671  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13534670 tgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 367
Target Start/End: Complemental strand, 13624307 - 13624149
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  13624307 tcattttcacctctgggtgtaccgcatatatacggcactt-gtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 13624211  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13624210 tgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 42600804 - 42600968
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||||||||||||||  |||||||| | |||||  ||||||||||||| ||||||||||||||| |||||||||||             ||||    
T  42600804 tcattttcacctttgggtgtaccacatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgcttttttaaaaaaaaaaacgttt 42600902  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  42600903 tgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccctgc 42600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 23798342 - 23798179
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| ||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  23798342 tcattttcacttttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctctttaaaaaaaatatacgttt 23798244  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  23798243 tgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccctg 23798179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 356
Target Start/End: Original strand, 10917413 - 10917561
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||| ||||| |||||             ||||    
T  10917413 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgttttttttaaaaaaatac-gttt 10917510  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10917511 tgattttatcactggcctcttttcattctcagagccgagcctccgaattct 10917561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 372
Target Start/End: Original strand, 41879203 - 41879366
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||| ||||| ||||||||| |  |||| |||||||||||||| ||||||||||||||||||||| | |||             ||||    
T  41879203 tcattttcacctttggatgtaccgcatatatacggtaccttgtatttatctttta-aaaaatataaatagaacattgttcttttaaaaaaatac--gttt 41879299  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgca 372  Q
    | |||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  41879300 taattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccctgca 41879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 359
Target Start/End: Complemental strand, 5860825 - 5860671
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgcttttt--nnnnnnnnnnnntgt 303  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||              |||    
T  5860825 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctctttaaaaataaatattatgt 5860727  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcag 359  Q
    ||||||||||||| || |||||||||||| |||||||||||||||| |||||||||    
T  5860726 tttgattttatcattgacctcttttcatttccagagccgagcctccaaattctcag 5860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 20003796 - 20003728
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  20003796 gttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 502
Target Start/End: Complemental strand, 33954881 - 33954758
Alignment:
Q  378 atgcgcgtcaagaccagaaaagctaagacaaggcacggctatgaatagggtgtaaggattaatttgtatgcaccattccggtatagttgtgttatcctgt 477  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||   ||| |   |||||||||||||  || |    
T  33954881 atgcacgtcaagaccagaaaagctaagacaaggcacgactataaatagggtgtaacg-ttaatttgtatgtgtcatccttatatagttgtgttacactat 33954783  T
Q  478 gttacattgcatctaatcatgtatt 502  Q
    ||||||||||||| |||||||||||    
T  33954782 gttacattgcatccaatcatgtatt 33954758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 39332484 - 39332411
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||| ||||| || |||||||||||||| |||||||||||||  |||||| ||||||||||||||    
T  39332484 attttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaat-taaatagaacattg 39332411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 5973186 - 5973113
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||| || |||||||||  |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  5973186 attttcatctatgggtgtacaacatatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 5973113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 11290208 - 11290281
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||| ||||||  |||||||| ||||||| |||||||||||||| |||||| |||||| |||||||    
T  11290208 attttcacctttgagtgtacaacatatatacgacaccttgtatttatctttta-aaaaatttaaataaaacattg 11290281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 23941170 - 23941097
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||| |||||||||||  || |||||||||||||| |||||||||||||| |||||| |||||| |||||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatctttta-aaaaatttaaataaaacattg 23941097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 41677253 - 41677179
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| | ||||  ||||||||| |||| || |||||||||||||| |||||| ||||||||||||||    
T  41677253 attttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattg 41677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 5942720 - 5942778
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaa 266  Q
    |||||||||||||||||||| ||| ||||| |||| || |||||||||||||| |||||    
T  5942720 attttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaaa 5942778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 7944601 - 7944528
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||||||||||  |||||||| | ||||| |||||||| ||||| |||||| |||||| |||||||    
T  7944601 attttcacctttgggtgtacaacatatatacggcaccttgtatttatttttta-aaaaatttaaataaaacattg 7944528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 8646230 - 8646302
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| |||| ||||| |||||||||| || |||| |||||||||||||| |||||| ||||||||||||||    
T  8646230 attttcacatttgcgtgta-tgcatatatacgataccttgtatttatctttta-aaaaatttaaatagaacattg 8646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 30674482 - 30674409
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||| |||||  ||||||||| |||||||  ||||||||||||| ||| || ||||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatctttta-aaacatttaaatagaacattg 30674409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 8102936 - 8103008
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||| ||||||| |||||||||   ||||| |||||||||||||| |||||| |||||| ||||||    
T  8102936 attttcacctttaggtgtaccgcatatatactgcaccttgtatttatctttta-aaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 5721583 - 5721654
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacat 280  Q
    |||||||| ||||||||||| |  |||||| | ||||| |||||||||||||| |||||| ||||||||||||    
T  5721583 attttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaat-taaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 34789941 - 34789889
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatctttta 260  Q
    ||||||||||||||||||||  |||||||| |||| || ||||||||||||||    
T  34789941 attttcacctttgggtgtacaacatatatacgacatcttgtatttatctttta 34789889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 15167494 - 15167421
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||||||  |||||||||  |||| |  ||||||||||||| |||||| ||||||||||||||    
T  15167494 attttcacatttgggtgtatcgcatatatacaacactttatatttatctttta-aaaaatttaaatagaacattg 15167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 179 - 371
Target Start/End: Original strand, 26253988 - 26254179
Alignment:
Q  179 ggacataatatattatggatttgagactcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaac 278  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||||||    
T  26253988 ggacataatatattatggatttgagactcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaac 26254086  T
Q  279 attgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||| |||            ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  26254087 attgctcttttaaaaaaaaatatgttttgattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctgc 26254179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 10329490 - 10329327
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||| | |  |||||||| | |||||  ||||||||||||| |||||||||||||||||||||||||||             ||||    
T  10329490 tcattttcacctttgggttttcctcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgcttttttttaaaaaaatacgttt 10329392  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10329391 tgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccctg 10329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 29077242 - 29077404
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | ||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  29077242 tcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 29077339  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29077340 tgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29077404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 23551151 - 23550988
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||| ||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||| |||||||||||            |||||    
T  23551151 tcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaatataaatagatcattgcttttt-ttaaaaaaatatgttt 23551053  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||    
T  23551052 tgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccctg 23550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 18776846 - 18776683
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| | ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            | |||    
T  18776846 tcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatattt 18776748  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  18776747 tgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 12596367 - 12596207
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| |||||||||  |||||||| | ||||| |||||||||||| | ||||||||||||||||||| ||| |||             ||||    
T  12596367 tcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaa-aaaaatataaatagaacatcgctctttaaaaaaaaac---gttt 12596272  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12596271 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 12596207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 47985050 - 47984884
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||| ||||||| ||||||||||||||||||||||| ||||             |||    
T  47985050 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatagaacattgcttttttaaaaaaaaaacacgtt 47984951  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||| ||| ||||||||||    
T  47984950 ttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctgc 47984884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 367
Target Start/End: Complemental strand, 8171619 - 8171460
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||| || ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             | ||    
T  8171619 tcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gctt 8171522  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8171521 tgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 20091361 - 20091197
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt-gtt 304  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||| ||||| |||||              |||    
T  20091361 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgttttttttaaaaaaaaatacgtt 20091263  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  20091262 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 19692116 - 19692279
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||| ||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  19692116 tcattttcacctttaggtgtaccgcatatatatggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaatacgttt 19692214  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| | ||||||||| |||||||||||| |||||||||| ||| | |||||||    
T  19692215 tgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccctg 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 208 - 371
Target Start/End: Original strand, 28749733 - 28749896
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtttt 306  Q
    |||||||| | || |||||| ||||||||| | ||||| |||||||||||||  |||||||||||||||| |||||| ||||            ||||||    
T  28749733 attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttc-aaaaatataaatagaatattgctcttttgaaaaaaaaatatgtttt 28749831  T
Q  307 gattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  28749832 gattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctgc 28749896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 208 - 371
Target Start/End: Complemental strand, 48983922 - 48983755
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt-----g 302  Q
    |||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||| |||||                  |    
T  48983922 attttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagatcattgttttttttaaaaaaaaaaaaatacg 48983824  T
Q  303 ttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  48983823 ttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacggccctgc 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 369
Target Start/End: Complemental strand, 33162444 - 33162257
Alignment:
Q  179 ggacataatatattatggatttgagactcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaac 278  Q
    ||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||| |    
T  33162444 ggacataatatattatgaatttgacac--attttcacctttaggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagagc 33162348  T
Q  279 attgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccct 369  Q
    |||||| |||             ||||| ||||||||| || |||||||||| ||||||| ||||  ||||||||||| ||||| ||||||    
T  33162347 attgctctttaaaaaaaaaatacgttttaattttatcattgacctcttttcactcccagaaccgaatctccgaattcttaggaatggccct 33162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 25010543 - 25010611
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  25010543 gttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggccctg 25010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 24525765 - 24525598
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt---g 302  Q
    |||||||||| ||||||||||| ||||||| | | |||||  ||||||||||||| ||||||||||||||||||||| ||||                 |    
T  24525765 tcattttcacttttgggtgtaccgcatatacacggcaccttatatttatctttta-aaaaatataaatagaacattgtttttaaaaaaaaaaaaaatacg 24525667  T
Q  303 ttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  24525666 ttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccctgc 24525598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 38414956 - 38414792
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||||||||||||||  |||||||| | |||||  ||||||||||||| ||||||| ||||||||| ||||| |||             ||||    
T  38414956 tcattttcacctttgggtgtaccacatatatacgtcaccttatatttatctttta-aaaaatacaaatagaacgttgctcttttgcaaaaaaatacgttt 38414858  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||| ||| | ||||||||||| |||||| |||||||||||||||| ||| ||| ||||||    
T  38414857 tgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctgc 38414792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 40357365 - 40357309
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  40357365 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctca 40357309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 2611340 - 2611267
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||| ||| |||||| ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  2611340 attttcaccattgtgtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 2611267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 6765759 - 6765686
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||| ||||| || |||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  6765759 attttcacctttggatgtacggcttatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 8239803 - 8239869
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccc 368  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| ||| |||||||    
T  8239803 gttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 10955506 - 10955579
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacat 280  Q
    |||||||||||| || |||||| ||||||||| | |||||  ||||||||||||| |||||||||||||||||||    
T  10955506 tcattttcacctctgagtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacat 10955579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 12981350 - 12981422
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    ||||||||||||| |||||| || ||||||||  |||| |||||||||||||| |||||| |||||||||||||    
T  12981350 attttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaat-taaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 9021878 - 9021812
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatag 275  Q
    |||||||||||||||||||| ||||||||| | ||| | |||||||||||||| |||||| |||||||    
T  9021878 attttcacctttgggtgtaccgcatatatacggcacattgtatttatctttta-aaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 10955605 - 10955672
Alignment:
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||||| | || |||||||    
T  10955605 tttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagccctgc 10955672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 7398475 - 7398548
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| ||||||   |||||||||| ||||| |||||||||||| | |||||| ||||||||||||||    
T  7398475 attttcacctttaggtgtatcacatatatatggcaccttgtatttatctttca-aaaaatttaaatagaacattg 7398548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 36903002 - 36902929
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| |||||||  |||||||| |||| || |||||||||| ||| |||||| ||||||||||||||    
T  36903002 attttcacctttaggtgtacaacatatatacgacatcttgtatttatctatta-aaaaatttaaatagaacattg 36902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 8239709 - 8239783
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||| |||||||||||  |||||||| | ||| |  ||||||| ||||| ||||||||||||||||||||    
T  8239709 tcattttcacatttgggtgtaccacatatatacggcacattatatttatttttta-aaaaatataaatagaacatt 8239783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 23859097 - 23859169
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    ||||||| |||||||||||  ||||||||| |  || | |||||||||||||| |||||| |||||||||||||    
T  23859097 attttcatctttgggtgtatcgcatatatacggtacattgtatttatctttta-aaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 36891602 - 36891674
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||||| ||||| | |||||||  |||| | ||||| ||| |||| ||||||||||||||||||||    
T  36891602 attttcacctttggatgtaccgaatatatacaacacattgtattcatcattta-aaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 27237479 - 27237428
Alignment:
Q  230 catatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||  |||||| |||||||||||||| |||||| ||||||||||||||    
T  27237479 catatatacaacaccttgtatttatctttta-aaaaatttaaatagaacattg 27237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 179 - 370
Target Start/End: Complemental strand, 16922436 - 16922245
Alignment:
Q  179 ggacataatatattatggatttgagactcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaac 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| |  ||||||||||||| |||||||||||||||||    
T  16922436 ggacataatatattatggatttgagactcattttcacctttggggatactgcatatatacgacactttatatttatctttta-aaaaatataaatagaac 16922338  T
Q  279 attgct-ttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||| ||||             ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||| |||||||||    
T  16922337 attgctcttttaaaaataaaaaacgttttgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 34027606 - 34027768
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||             ||||    
T  34027606 tcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgctttttttaaaaaaatac-gttt 34027703  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  34027704 tgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 54780804 - 54780968
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||||||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||             |||    
T  54780804 tcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaatacgtt 54780902  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  54780903 ttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 32128611 - 32128775
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  32128611 tcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaatacgttt 32128709  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  32128710 tgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccctgc 32128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 32915412 - 32915575
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| |||||||||  |||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  32915412 tcatttttacctctgggtgtaccacatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaaccgttt 32915510  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32915511 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 354
Target Start/End: Complemental strand, 37777303 - 37777156
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| |||||||||||||||||||| ||||||             ||||    
T  37777303 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattactttttttttaaaaaatacgttt 37777205  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaatt 354  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37777204 tgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 358
Target Start/End: Complemental strand, 38209671 - 38209520
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            | |||    
T  38209671 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctctttaaaaaaaaattatattt 38209573  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  38209572 tgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 34768654 - 34768492
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  34768654 tcattttcacctctgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaata-tgttt 34768557  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  34768556 tgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 2790821 - 2790659
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |  ||||  ||||||||||||| ||||||||||||||||||||| || ||            |||||    
T  2790821 tcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttta-aaaaatataaatagaacattg-ttcttttaaaaaaaaaatgttt 2790724  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  2790723 tgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 16845048 - 16845210
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||| ||||||||||| |||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  16845048 tcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 16845146  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| |||||||||    
T  16845147 tgattttatcactgg-cttttttcatttccagagccgagcctccgaattcttagggacggccctg 16845210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 356
Target Start/End: Complemental strand, 43455611 - 43455463
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  43455611 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaataatac-gttt 43455514  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  43455513 tgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 370
Target Start/End: Complemental strand, 10428273 - 10428116
Alignment:
Q  210 tttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgat 309  Q
    |||||||| ||||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||||||              |||||||    
T  10428273 tttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctttttaaaaaaaataaa--ttttgat 10428177  T
Q  310 tttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||  | |||||||||    
T  10428176 tttagcactgacctcttttcattcccagagccgagcctccgaattctcgaggacggccctg 10428116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 371
Target Start/End: Original strand, 17679432 - 17679590
Alignment:
Q  211 ttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgatt 310  Q
    ||||||| ||||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||||| |||||| |||             |||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaatattgctcttttaaaaaaaatac-gttttgatt 17679529  T
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  17679530 ttatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctgc 17679590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 366
Target Start/End: Original strand, 47129014 - 47129172
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||| | |||              |||    
T  47129014 tcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgttcttttaaaaaaaataca-ttt 47129111  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggc 366  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  47129112 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 47129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 5128922 - 5128757
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| |||||| |||||||||||| | ||||| |||||||||||||| |||||||||||||||| || ||| ||              ||||    
T  5128922 tcattttcacctctgggtgcactgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaatatcgctcttctaaaaaaaaaaacgttt 5128824  T
Q  306 t-gattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    | ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  5128823 tagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccctgc 5128757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 55255319 - 55255448
Alignment:
Q  241 cacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagc 340  Q
    ||||| |||||||||||||| |||||||||||| |||||||||| |||            ||||||||||||||||||||||||||||||||  ||||||    
T  55255319 caccttgtatttatctttta-aaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagc 55255417  T
Q  341 cgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||||||| ||||||||||    
T  55255418 cgagcctccgaattctcagggacggccctgc 55255448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 10978927 - 10979093
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt--gt 303  Q
    |||||||||| | ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||            |  ||    
T  10978927 tcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaaatacgt 10979025  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||  ||||||||||||||||||||  | |||||||||||||||  ||||||||||    
T  10979026 tttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccctgc 10979093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 379
Target Start/End: Complemental strand, 16882475 - 16882304
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||| ||||||| | ||||| | | |||||  ||||||||||||| |||| |||||||||||||||| |||||             ||||    
T  16882475 tcattttcaccttttggtgtaccgtatatacacggcaccttatatttatctttta-aaaagtataaatagaacattgttttttttaaaaaaatac-gttt 16882378  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcatgtacat 379  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||    
T  16882377 tgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccctgcttgtacat 16882304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 367
Target Start/End: Complemental strand, 35779405 - 35779248
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| |||             ||||    
T  35779405 tcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatat-aatagaacattgctctttaaaaaaaatac--gttt 35779310  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    ||||||||||||| |||||||||||||||  ||| ||| |||||||||||||| | ||||||    
T  35779309 tgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggcc 35779248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 54083322 - 54083159
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| | |||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||| ||||| |||||             ||||    
T  54083322 tcatttttatctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgttttttttaaaaaaatac-gttt 54083225  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| | ||| ||||||||||    
T  54083224 tgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccctgc 54083159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 358
Target Start/End: Original strand, 1105559 - 1105709
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | ||||||| ||||||||| || |||| |||||||||||||| |||||||||||||||||||  || |||             ||||    
T  1105559 tcattttcacctctaggtgtaccgcatatatacgataccttgtatttatctttta-aaaaatataaatagaacatcactcttttaaaaaaaatac-gttt 1105656  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  1105657 tgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 1105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 48209267 - 48209437
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||| ||||| | ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||             |||    
T  48209267 tcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaatacgtt 48209365  T
Q  305 ttgatttta-----tcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||     ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  48209366 ttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccctgc 48209437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 37514686 - 37514848
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| || |||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||              |||    
T  37514686 tcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctctttaaaaaaaaaaatacgtt 37514784  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||||||   || |||||||| |||||||||| |||||||||    
T  37514785 ttgattttatcactggcctcttttcattccc--cgctgagcctccaaattctcagggacggccctg 37514848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 207 - 354
Target Start/End: Original strand, 51964736 - 51964884
Alignment:
Q  207 cattttcacctttgggtgtactgcatatatatgacacctcgtatttatctttt--agaaaaatataaatagaacattgctttttnnnnnnnnnnnntgtt 304  Q
    ||||||||||| ||||||||  ||||||||| | ||||| |||||||||||||  | ||||||||||||||||||||||| |||             |||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaatac-gtt 51964834  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 354  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  51964835 ttgattttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 19498531 - 19498691
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||| ||||| |||||||   | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  19498531 tcattttcacctttggctgtaccgcatatac--ggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaacaaaatac-gttt 19498626  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||  |||||||||    
T  19498627 tgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccctg 19498691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 354
Target Start/End: Complemental strand, 23508564 - 23508443
Alignment:
Q  233 atatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcatt 332  Q
    ||||| ||||||| |||||||||||||| |||| ||||||||||||||||||  ||              ||||||||||||||||||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcatt 23508465  T
Q  333 cccagagccgagcctccgaatt 354  Q
    |||| |||||||||||||||||    
T  23508464 cccaaagccgagcctccgaatt 23508443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 24969718 - 24969786
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  24969718 gttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctg 24969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 35465226 - 35465284
Alignment:
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcag 359  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  35465226 tgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctcag 35465284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 38352251 - 38352197
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  38352251 gttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 40089646 - 40089714
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||| ||| ||| |||||    
T  40089646 gttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 13460234 - 13460306
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaaca 279  Q
    |||||||||| | ||||| ||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  13460234 tcattttcacatctgggtataccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 370
Target Start/End: Complemental strand, 9578635 - 9578575
Alignment:
Q  310 tttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||| | |||||||||    
T  9578635 tttatcacttgcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctg 9578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 36178701 - 36178774
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||||||  ||||||||| ||||||| |||||||||||||| || ||| ||||||||||||||    
T  36178701 attttcacatttgggtgtatcgcatatatacgacaccttgtatttatctttta-aataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 37744988 - 37744916
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacat 280  Q
    |||||||||||||| ||||  ||||||||  |||||||  ||||||||||||| |||||| ||||||||||||    
T  37744988 attttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 980336 - 980395
Alignment:
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||||||||| |||| ||||    
T  980336 ttatcaccggcctccttttaatcccagagccgagcctccgaattctcagggacggtcctg 980395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 13460305 - 13460360
Alignment:
Q  315 cactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||| |||||||| |||||||||| |||||||||||||||||| | |||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctg 13460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 51691980 - 51691918
Alignment:
Q  221 ggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct 284  Q
    ||||||| ||||||||| | ||||| |||||||||||||| |||||| ||||||||||||||||    
T  51691980 ggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatttaaatagaacattgct 51691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 9578728 - 9578667
Alignment:
Q  223 tgtactgcatatatatgac-acctcgtatttatcttttagaaaaatataaatagaacattgct 284  Q
    ||||| ||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  9578728 tgtaccgcatatatatggctaccttgtatttatctttta-aaaaatataaatagaacattgct 9578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 27112059 - 27112132
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||| ||||||  ||||||||||| ||||| |||||||||||||| |||||| ||||| ||||||||    
T  27112059 attttcacattttggtgtatcgcatatatatgtcaccttgtatttatctttta-aaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 36118536 - 36118463
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||  ||||||||||   |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  36118536 attttcatatttgggtgtatcacatatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 39655332 - 39655259
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||||||||| ||||||||  |  || | |||||||||||||| |||||| ||||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatctttta-aaaaatttaaatagaacattg 39655259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 52468315 - 52468388
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||| ||||   |||||||| | ||||| |||||||||||||| |||||| ||||||||||||||    
T  52468315 attttcacctttggatgtataacatatatacggcaccttgtatttatctttta-aaaaatttaaatagaacattg 52468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 2135393 - 2135321
Alignment:
Q  214 acctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttt 287  Q
    |||||||| ||||  ||||||||| ||||||| |||||||||||||| |||||| ||||||||| |||| ||||    
T  2135393 acctttggatgtatcgcatatatacgacaccttgtatttatctttta-aaaaatttaaatagaatattgttttt 2135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 4167969 - 4167912
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaa 265  Q
    |||||||||||||||||||  ||||||||| | ||||| |||||||||||||| ||||    
T  4167969 attttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaa 4167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 39329470 - 39329397
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||| |||||||||||   ||||||||  |||||| |||||||||||||| |||||| |||| |||||||||    
T  39329470 attttcatctttgggtgtatcacatatatacaacaccttgtatttatctttta-aaaaatttaaagagaacattg 39329397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 40089543 - 40089597
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatctttta 260  Q
    |||||||||||||||| ||||| ||||||||| | |||||  |||||||||||||    
T  40089543 tcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttta 40089597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 45656204 - 45656277
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||| | ||  ||||||||||||||||| | |||||||||||| |||||| |||||| |||||||    
T  45656204 attttcacatttggatttatcgcatatatatgacaccttgcatttatctttta-aaaaatttaaataaaacattg 45656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 2975411 - 2975358
Alignment:
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 354  Q
    |||||||||||||||| || ||||||||||||  ||||||||||| | ||||||    
T  2975411 tgttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 24969496 - 24969535
Alignment:
Q  248 tatttatcttttagaaaaatataaatagaacattgcttttt 288  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  24969496 tatttatctttta-aaaaatataaatagatcattgcttttt 24969535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 13727480 - 13727317
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  13727480 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 13727382  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  13727381 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 21280570 - 21280733
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  21280570 tcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 21280668  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21280669 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 21280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21479519 - 21479686
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||            ||||    
T  21479519 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaattatgtt 21479617  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcat 373  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  21479618 ttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccctgcat 21479686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 17353979 - 17354142
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| ||||||||||| ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||             ||||    
T  17353979 tcattttcacatttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgctttttttaaaaaaaatacgttt 17354077  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||| ||| |||||||||    
T  17354078 tgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccctg 17354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 27788769 - 27788608
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| |||||||||||||||| |||||| |||             ||||    
T  27788769 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaaaattgctcttttaaaaaaatac--gttt 27788673  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  27788672 tgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 27788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 20711801 - 20711638
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  20711801 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaatacgttt 20711703  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  20711702 tgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctg 20711638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 207 - 371
Target Start/End: Complemental strand, 27314259 - 27314096
Alignment:
Q  207 cattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgtttt 306  Q
    ||||||||||| || |||||| ||||||||| | ||||| |||||||||||||  ||||||||||||||||||||||| |||             |||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaatac-gtttt 27314161  T
Q  307 gattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  27314160 gattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctgc 27314096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 206 - 358
Target Start/End: Original strand, 33774142 - 33774294
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||| ||||||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||||||||| || ||||            ||||    
T  33774142 tcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattactcttttaaaaaaaaattatgtt 33774240  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  33774241 ttgattttattactggcctcttttcattttcagagccgagcctccgaattctca 33774294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 30832511 - 30832442
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  30832511 gttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccctgc 30832442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 361
Target Start/End: Original strand, 28075808 - 28075965
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgcttttt---nnnnnnnnnnnntg 302  Q
    |||||||||||||||||||||  ||||||||| | |||||  ||||||||||||| |||||||||||||||||||||||||||                |    
T  28075808 tcattttcacctttgggtgtatcgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctttttaaaataaaaaaaatacg 28075906  T
Q  303 ttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagga 361  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  28075907 ttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 28075965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 368
Target Start/End: Complemental strand, 1155930 - 1155767
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt--gt 303  Q
    |||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||            |   |    
T  1155930 tcattttcacctctggatgtaccgcatatatatgacaccttgtatttatctttta-aaaaatataaatagaacattgctctttaaaaaaaaaaattactt 1155832  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccc 368  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||| |||| | ||| |||||||    
T  1155831 tttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 24710982 - 24710914
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  24710982 gttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggccctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 34397882 - 34397959
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct 284  Q
    ||||||| |||||| ||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||    
T  34397882 tcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatctttta-aaaaatataaatagaacattgct 34397959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 19737773 - 19737612
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | ||||||| ||||||||| | ||||| ||||||||| |||| ||||||||||||||||||||||| |||              |||    
T  19737773 tcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatc-tttaaaaaaatataaatagaacattgctcttttaaaaaaaaaac-attt 19737676  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||| ||| |||||||| ||| | |||||||||| ||| |||||    
T  19737675 tgattttatcactggcctcttttca-tcctagagccgaaccttcaaattctcagggacgaccctg 19737612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 356
Target Start/End: Complemental strand, 235307 - 235157
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatat--gacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgt 303  Q
    ||||||||| |||||||||||| | |||||||   | |||||  ||||||||||||| ||||||||||||||| |||||||||||             ||    
T  235307 tcattttcatctttgggtgtacggtatatatacccggcaccttatatttatctttta-aaaaatataaatagatcattgctttttaaaaaaaaatac-gt 235210  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    ||||||||||||||||| |||||||||||| || |||||| ||||||||||||    
T  235209 tttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 6159465 - 6159538
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||| ||||||||  ||||| ||||||||| ||||| | |||||||||||||| |||||||||||||||||||||    
T  6159465 atttccacctttgaatgtaccgcatatatacgacacattgtatttatctttta-aaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 24711080 - 24711007
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacat 280  Q
    |||||||||||| || ||||||  |||||||| | ||||| |||||||||||||| |||||||||||||||||||    
T  24711080 tcattttcacctctgagtgtaccacatatatacggcaccttgtatttatctttta-aaaaatataaatagaacat 24711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 30121789 - 30121862
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||| ||||  ||||||||||||||||| |||||||| ||||| |||||| |||||| |||||||    
T  30121789 attttcacctttggatgtatcgcatatatatgacaccttgtatttatttttta-aaaaatttaaataaaacattg 30121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 2477663 - 2477590
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||| ||||||  ||||||||||| ||||| |||||||||||||| |||||| ||||| ||||||||    
T  2477663 attttcacattttggtgtatcgcatatatatgtcaccttgtatttatctttta-aaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 19987277 - 19987322
Alignment:
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    ||||||||| |||||||||||||  |||||||| ||||||||||||    
T  19987277 ttatcactgacctcttttcattctgagagccgatcctccgaattct 19987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 16198872 - 16198709
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||  ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||             ||||    
T  16198872 tcattttcacctttgggtgtatcgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgctttttaaaaaaaaaatacgttt 16198774  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  16198773 tgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccctg 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 206 - 360
Target Start/End: Complemental strand, 34756444 - 34756291
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  34756444 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 34756346  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagg 360  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34756345 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagg 34756291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 356
Target Start/End: Original strand, 7337994 - 7338170
Alignment:
Q  179 ggacataatatattatggatttgagactcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaac 278  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  7337994 ggacataatctattatggattttagactcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaac 7338092  T
Q  279 attgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    |||||| |||             ||||||||||||||  || |||||||||||||| |||||||||||||| ||||||    
T  7338093 attgctctttaaaaaaaaaaaacgttttgattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 27079033 - 27079197
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||||| ||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||             |||    
T  27079033 tcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaatacgtt 27079131  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  27079132 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccctg 27079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 365
Target Start/End: Original strand, 2274912 - 2275070
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  2274912 tcattttcacctctgggtgtactgcatatatacgataccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaatacgttt 2275010  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacgg 365  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  2275011 tgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 15480167 - 15480006
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| |||| || |||||||||||||| ||||||||||||||||||| | | |||            |||||    
T  15480167 tcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatctttta-aaaaatataaatagaacatcggtctttaaaaaaaata--tgttt 15480071  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15480070 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 15480006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 375
Target Start/End: Complemental strand, 36187957 - 36187790
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||| ||||| ||||||||||||||||||| ||| |||             ||||    
T  36187957 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatatttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaac-gttt 36187860  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcatgt 375  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36187859 tgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctgcatgt 36187790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 38869441 - 38869279
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  38869441 tcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 38869344  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  38869343 tgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctg 38869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 206 - 356
Target Start/End: Original strand, 9364313 - 9364462
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||||||              ||||    
T  9364313 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgcttttaaaaaaaaaaatacgttt 9364411  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9364412 tgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 366
Target Start/End: Original strand, 19523221 - 19523380
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||  ||| |||             ||||    
T  19523221 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacaccgctctttaaaaaaaaaacacgttt 19523319  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggc 366  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  19523320 tgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 16592152 - 16591990
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||| |||            |||||    
T  16592152 tcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttag-aaaatataaatagaacattgctcttt-taaaaaaaatatgttt 16592055  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||    
T  16592054 tgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctg 16591990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 208 - 370
Target Start/End: Complemental strand, 31194688 - 31194528
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttg 307  Q
    |||||||||| ||||| ||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||||    
T  31194688 attttcacctctgggtttaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaagaaatac-gttttg 31194591  T
Q  308 attttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  31194590 attttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 22986636 - 22986473
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| ||||| | |||||| ||||||| |||||||| |||||||||||||| |||             ||||    
T  22986636 tcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtctttta-aaaaatattaatagaacattgctcttttaaaaaaaattacgttt 22986538  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  22986537 tgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctg 22986473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 27924104 - 27924267
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||||||| ||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||  |||||||||||             ||||    
T  27924104 tcatttttacctttggatgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaataggtcattgcttttttttaaaaaaatacgttt 27924202  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||| || ||||||||||    
T  27924203 tgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttagaaacggccctg 27924267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 7670946 - 7671118
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt---- 301  Q
    |||||||||||||||||||||| | | ||||| | |||||  ||||||||||||| |||||||||||||||||||||||||||                     
T  7670946 tcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgctttttttttttaaaaaaaaaaa 7671045  T
Q  302 ----gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  7671046 atacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaaggacggccctg 7671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 16799405 - 16799239
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg-ct-ttttnnnnnnnnnnnntgt 303  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||| ||||| ||||||||||||||||||||  || ||||             ||    
T  16799405 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatttttta-aaaaatataaatagaacatttactcttttaaaaaaaaaatacgt 16799307  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  16799306 tttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggccctgc 16799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 30854351 - 30854511
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| || |||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  30854351 tcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaatacgttt 30854449  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    | |||||||| ||| ||| ||||||||||||||||||||||||| |||| ||||| ||||||    
T  30854450 taattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 369
Target Start/End: Complemental strand, 28822420 - 28822253
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgcttttt-----nnnnnnnnnnnn 300  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||                     
T  28822420 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaaaaaata 28822322  T
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccct 369  Q
     |||||||||||||||||  |||||||||||||||| |||||| |||||||||||| ||| ||||||||    
T  28822321 cgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 286
Target Start/End: Complemental strand, 40389614 - 40389535
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgcttt 286  Q
    |||||||||||||||| ||||| ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  40389614 tcattttcacctttggatgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgcttt 40389535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 23284011 - 23283943
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||| | | | ||||||| ||||||||||| |||||||||    
T  23284011 gttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 370
Target Start/End: Complemental strand, 31881510 - 31881348
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtttt 306  Q
    ||||||| || ||| ||| | ||||||||| | ||||  |||||||||||||| ||||||||||||||||||||||| ||||             |||||    
T  31881510 attttcatctctggatgttccgcatatatacggcaccgtgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaaaacgtttt 31881412  T
Q  307 gattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||| |||| || |||||||||||||||||||||||||  |||| ||||| |||||||||    
T  31881411 gattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctg 31881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 40389518 - 40389467
Alignment:
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 23284140 - 23284063
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct 284  Q
    ||||||||| |||||||||||| ||||||||| ||||||| |||||||   |||| |||||||||||||||||||||||    
T  23284140 tcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtcttta-aaaaatataaatagaacattgct 23284063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 36868952 - 36868879
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| |||||||||||  |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  36868952 attttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaat-taaatagaacattg 36868879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 24395763 - 24395835
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||||| |||| || |||||||  |||||| |||||||||||||| |||||| |||||||||||||    
T  24395763 attttcacctttggatgtattgtatatatacaacaccttgtatttatctttta-aaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 2530973 - 2530901
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||||| ||||| | ||||||| ||||| | |||||||||||||| |||||  |||||||||||||    
T  2530973 attttcacctttggatgtaccgtatatatacgacacattgtatttatctttta-aaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 26719025 - 26718953
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    ||||||||||||| |||||  ||||||||| ||||| | |||||||||||||| |||| | |||||||||||||    
T  26719025 attttcacctttgagtgtatcgcatatatacgacactttgtatttatctttta-aaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 26988769 - 26988697
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    ||||||||||||| |||||  ||||||||| ||||| | |||||||||||||| |||| | |||||||||||||    
T  26988769 attttcacctttgagtgtatcgcatatatacgacactttgtatttatctttta-aaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 33037805 - 33037877
Alignment:
Q  209 ttttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||||||||  |||||||| || | || |||||||||||||| |||||| |||||| |||||||    
T  33037805 ttttcacctttgggtgtacaacatatatacgatatcttgtatttatctttta-aaaaatttaaataaaacattg 33037877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 14318439 - 14318388
Alignment:
Q  230 catatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  14318439 catatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 14318388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 22648808 - 22648739
Alignment:
Q  212 tcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||| ||| |  |||||||| ||||| | |||||||||||||| |||||| ||||||||||||||    
T  22648808 tcacctttggatgtgccacatatatacgacacattgtatttatctttta-aaaaatttaaatagaacattg 22648739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 3e-40; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 4505915 - 4506078
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  4505915 tcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 4506013  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4506014 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 4506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 12337529 - 12337365
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| |||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||            | ||    
T  12337529 tcattttcacctctgggtgtaccacatatatatgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaattatatt 12337431  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  12337430 ttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccctg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 371
Target Start/End: Original strand, 40636164 - 40636322
Alignment:
Q  211 ttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgatt 310  Q
    ||||||| ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||            ||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaata-tgttttgatt 40636261  T
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  40636262 ttatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggctctgc 40636322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 26716149 - 26716313
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  26716149 tcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgctcttttaaaaaaaaatacgttt 26716248  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||||||| |||||||||  |||||||| ||| |||||||||    
T  26716249 tgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctg 26716313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 8907160 - 8906996
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    ||||||| |||| ||||||||| ||||||||| | | ||| |||||||||||||| |||||||||||||||||||| || ||||            ||||    
T  8907160 tcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatctttta-aaaaatataaatagaacattactcttttaaaaaaaaattatgtt 8907062  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8907061 ttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 6965028 - 6965186
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||| | |||||||||||||| ||||||||||||||||||||||| |||            | |||    
T  6965028 tcattttcacctctgggtgtaccgcatatatacggcactttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaat--tattt 6965124  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6965125 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 29939943 - 29939781
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||| |||             ||||    
T  29939943 tcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 29939846  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||||| |||| ||||    
T  29939845 tgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcctg 29939781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 24410458 - 24410623
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt--gt 303  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||            |  ||    
T  24410458 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgttttttaaaaaaaaaaaatacgt 24410556  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  24410557 tttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggccctg 24410623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 27506821 - 27506659
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| ||||||||||||||  |||||||| | |||||  ||||||||||||| ||||||||||||||| |||||||||||             ||||    
T  27506821 tcatttttacctttgggtgtaccacatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgcttttttttaaaaaatac-gttt 27506724  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  27506723 tgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 27506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 3155238 - 3155401
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | ||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  3155238 tcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 3155336  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | |||||||||||| ||||||||||||   | ||||||||||||||||||||||| |||||||||    
T  3155337 taattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccctg 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 9046050 - 9046213
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| || ||             ||||    
T  9046050 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattg-ttcttttaaaaacaatacgttt 9046148  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||| ||||||||||| |||||  ||||||||  || |||||||||    
T  9046149 tgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 10762646 - 10762482
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||||||||||||||  ||||||||   |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  10762646 tcattttcacctttgggtgtaccacatatataccgcaccttatatttatctttta-aaaaatataaatagaacattgctctttaaaaaaaaaac--gttt 10762550  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcat 373  Q
    | ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||| |||||    
T  10762549 taattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggccatgcat 10762482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 34693996 - 34694155
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| |||||||||  |||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  34693996 tcattttgacctctgggtgtaccacatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 34694093  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    |||||||||||| |||||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  34694094 tgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 34716408 - 34716567
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| |||||||||  |||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  34716408 tcattttgacctctgggtgtaccacatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 34716505  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    |||||||||||| |||||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  34716506 tgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 3953027 - 3953189
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| |||| |||| | ||||| |||||||||||||| ||||||||||||||||||| | | |||            |  ||    
T  3953027 tcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatctttta-aaaaatataaatagaacatcggtctttaaaaaaaatacat--tt 3953123  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| |||||||||||| ||| |||||||||||| |||||||||| ||| ||||||    
T  3953124 tgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctgc 3953189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 1396686 - 1396629
Alignment:
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1396686 tgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattctca 1396629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 7742212 - 7742139
Alignment:
Q  209 ttttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||| ||||  ||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  7742212 ttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattg 7742139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 7162805 - 7162967
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| || || ||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||              |||    
T  7162805 tcattttcacctctgagtataccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaagaca-ttt 7162902  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | |||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||||    
T  7162903 taattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctg 7162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 360
Target Start/End: Complemental strand, 5952791 - 5952646
Alignment:
Q  211 ttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgatt 310  Q
    ||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||   |||||| ||||||||| |||             |||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa---taaatataacattgctcttttaaaaaaaatac-gttttgatt 5952696  T
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattctcagg 360  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  5952695 ttatcattggcctcttttcattccgagagccgaacctccgaattctcagg 5952646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 16097031 - 16097104
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||||||||||  |||||||| | ||||| |||||||||||||| |||||| ||||||||||||||    
T  16097031 attttcacctttgggtgtacatcatatatacggcaccttgtatttatctttta-aaaaatttaaatagaacattg 16097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 28425789 - 28425716
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||  | ||||||||||||||    
T  28425789 attttcacatttgggtgtactgcatatatacgacaccttgtatttatctttta-aaatttttaaatagaacattg 28425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 38400821 - 38400894
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||  ||||  ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||    
T  38400821 attttcacctttgaatgtatcgcatatatatgacaccttgtatttatctttta-aaaaatttaaatagaacattg 38400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 42029168 - 42029241
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| |||||||  ||| ||||||||||||  ||||||||||||| |||||| ||||||||||||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatctttta-aaaaatttaaatagaacattg 42029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 24035624 - 24035551
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| ||||||  |||| |||| | ||||| |||||||||||||| |||||| ||||||||||||||    
T  24035624 attttcacctttaggtgtatcgcatttatacggcaccttgtatttatctttta-aaaaatttaaatagaacattg 24035551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 8327733 - 8327785
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 354  Q
    ||||||||||||||||||  ||||||||||| ||||| | |||||||||||||    
T  8327733 gttttgattttatcactgatctcttttcatttccagaactgagcctccgaatt 8327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 13800624 - 13800550
Alignment:
Q  208 attttcaccttt-gggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||| |||||||  ||||||||| | |||||  ||||||||||||| |||||| ||||||||||||||    
T  13800624 attttcaccttttgggtgtatcgcatatatacggcaccttatatttatctttta-aaaaatttaaatagaacattg 13800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 8327681 - 8327720
Alignment:
Q  248 tatttatcttttagaaaaatataaatagaacattgcttttt 288  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  8327681 tatttatctttta-aaaaatataaatagatcattgcttttt 8327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 16227425 - 16227374
Alignment:
Q  230 catatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||| |||||||||||||| |||||| ||||||||| ||||    
T  16227425 catatatacgacaccttgtatttatctttta-aaaaatttaaatagaaaattg 16227374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 21665757 - 21665706
Alignment:
Q  230 catatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||  |||||||||||||| |||||| ||||||||||||||    
T  21665757 catatatacgacaccgtgtatttatctttta-aaaaatttaaatagaacattg 21665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 106560 - 106723
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||| | |||             ||||    
T  106560 tcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgttcttttaaaaaaaaatacgttt 106658  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  106659 tgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 106723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 38681174 - 38681011
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||| ||||| ||||| ||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  38681174 tcattttcacctctggatgtaccgcatacatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 38681076  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  38681075 tgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 38681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 54619284 - 54619121
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  54619284 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaattatgttt 54619186  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  54619185 tgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccctg 54619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 209 - 370
Target Start/End: Complemental strand, 36716103 - 36715942
Alignment:
Q  209 ttttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgttttg 307  Q
    ||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||            ||||||     
T  36716103 ttttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaataaaaattatgttttt 36716005  T
Q  308 attttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  36716004 attttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 8073419 - 8073257
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||| || |||             ||||    
T  8073419 tcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattactcttttaaaaaaaatac-gttt 8073322  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  8073321 tgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctg 8073257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 47467709 - 47467872
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||  ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  47467709 tcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctctttaaaaaaaaaacacgttt 47467807  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47467808 tgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 21582796 - 21582960
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||| ||||||| | ||||             |||    
T  21582796 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaataaaacattgttcttttaaaaaaaaaatacgtt 21582894  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  21582895 ttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 34290717 - 34290554
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||             ||||    
T  34290717 tcattttcacctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgtttttttaaaaaaaaatacgttt 34290619  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| | | |||||||||    
T  34290618 tgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccctg 34290554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 366
Target Start/End: Original strand, 37168392 - 37168551
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||| |||  |||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||             ||||    
T  37168392 tcattttcacctttgggtataccacatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgtttttttaaaaaaaaatacgttt 37168490  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggc 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  37168491 tgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 27078650 - 27078485
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnn-tgtt 304  Q
    |||||||||||| ||||| ||| ||||||||| | ||| | |||||||||||||| |||||||||||||||||||||||||||             ||||    
T  27078650 tcattttcacctctgggtataccgcatatatacggcactttgtatttatctttta-aaaaatataaatagaacattgcttttttaaaaaaaaattatgtt 27078552  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  27078551 ttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctgc 27078485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 27084447 - 27084282
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnn-tgtt 304  Q
    |||||||||||| ||||| ||| ||||||||| | ||| | |||||||||||||| |||||||||||||||||||||||||||             ||||    
T  27084447 tcattttcacctctgggtataccgcatatatacggcactttgtatttatctttta-aaaaatataaatagaacattgcttttttaaaaaaaaattatgtt 27084349  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  27084348 ttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctgc 27084282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 50258690 - 50258541
Alignment:
Q  220 gggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactg 319  Q
    |||||||| ||||||||| ||||||| |||||||| ||||| ||||||||||||||||||| ||| |||            |||||||||||||||||||    
T  50258690 gggtgtaccgcatatatacgacaccttgtatttatttttta-aaaaatataaatagaacatcgctctttttaaaaaaata-tgttttgattttatcactg 50258593  T
Q  320 gcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
      |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50258592 atctcttttcgttcccagagccgagcctccgaattctcaggaacggccctgc 50258541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 54407239 - 54407072
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt---g 302  Q
    |||||||||||||||| ||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||                |    
T  54407239 tcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgttttttttttaaaaaaaaaaacg 54407141  T
Q  303 ttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  54407140 ttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctgc 54407072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 53506965 - 53506802
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnn-tgtt 304  Q
    |||||||||||||||||||||| ||||||||| |  ||||  ||||||||||||| ||||||||||||||||||||| |||||             ||||    
T  53506965 tcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttta-aaaaatataaatagaacattgtttttttaaaaaaaaaatatgtt 53506867  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||    
T  53506866 ttgattttatcactggcctctcttcattcccagagccgagccttcgaattcttagg-acggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 366
Target Start/End: Original strand, 44708502 - 44708660
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| | ||||||| | |||||  ||||||||||||| |||||||||||||||||||| ||||||             ||||    
T  44708502 tcattttcacctttgggtgtaccggatatatacggcaccttatatttatctttta-aaaaatataaatagaacatttctttttttaaaaaaatac-gttt 44708599  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggc 366  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  44708600 tgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggc 44708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 50939314 - 50939149
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| ||||||||||||||   ||||||| | |||||  ||||||||||||| ||||||||||||||| |||||||||||             ||||    
T  50939314 tcatttttacctttgggtgtaccatatatatacggcaccttatatttatctttta-aaaaatataaatagatcattgctttttttaaaaaaatac-gttt 50939217  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgcat 373  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  50939216 tgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccctgcat 50939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 369
Target Start/End: Complemental strand, 3953977 - 3953816
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||| || ||              |||    
T  3953977 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattg-ttcttttaaaaaaaatacattt 3953880  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccct 369  Q
    | ||||||||||||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  3953879 taattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 42098826 - 42098989
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| || || ||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||              |||    
T  42098826 tcattttcacctctgagtataccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaagacattt 42098924  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||| || |||| |||||| |||||||||||| |||||||||    
T  42098925 tgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctg 42098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 43207318 - 43207157
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||  ||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  43207318 tcattttcacctttga-tgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 43207222  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | | |||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  43207221 ttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 43207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 208 - 367
Target Start/End: Original strand, 36605991 - 36606149
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttg 307  Q
    ||||||| || ||||||||| ||||||||| | ||||| |||||||||||||  ||||||||||||||||||||||| | |             ||||||    
T  36605991 attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctattaaaaaaaatac-gttttg 36606089  T
Q  308 attttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  36606090 attttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 370
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  308 attttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 18372531 - 18372658
Alignment:
Q  229 gcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactggcctctttt 328  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||             |||||||||||||||||| ||||||||    
T  18372531 gcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttttgattttatcactgacctctttt 18372628  T
Q  329 cattcccagagccgagcctccgaattctca 358  Q
    ||||||||| | ||||||||||||||||||    
T  18372629 cattcccagtgtcgagcctccgaattctca 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 359
Target Start/End: Complemental strand, 53149379 - 53149243
Alignment:
Q  222 gtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactggc 321  Q
    |||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             |||||||||||||||||||     
T  53149379 gtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggt 53149281  T
Q  322 ctcttttcattcccagagccgagcctccgaattctcag 359  Q
    |||||||||||||| || | ||||||||||||||||||    
T  53149280 ctcttttcattccccgaactgagcctccgaattctcag 53149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 48720497 - 48720429
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  48720497 gttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 48157247 - 48157302
Alignment:
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 356  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  48157247 tgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 9878768 - 9878691
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct 284  Q
    |||||||||||||||||||||| |||||||||   |||||  ||||||||||||| |||||||||||||||| ||||||    
T  9878768 tcattttcacctttgggtgtaccgcatatatactgcaccttatatttatctttta-aaaaatataaatagaatattgct 9878691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 26279569 - 26279642
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||| ||||||||||| |||||||||| |||||||  ||||||||||||| |||||| ||||||||||||||    
T  26279569 attttcatctttgggtgtattgcatatatacgacaccttctatttatctttta-aaaaatttaaatagaacattg 26279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 32319234 - 32319162
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||||||||||| |||||||||  |||| | |||||||||||||| |||||| |||||||||||||    
T  32319234 attttcacctttgggtgtaccgcatatatacaacactttgtatttatctttta-aaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 42453435 - 42453504
Alignment:
Q  212 tcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||| |||||| ||||| ||||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatctttta-aaaaatttaaattgaacattg 42453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 8420353 - 8420425
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||| |||||||||||  |||||||| | ||||| |||||||||||||| |||||| |||||||||||||    
T  8420353 attttcacatttgggtgtacaacatatatacggcaccttgtatttatctttta-aaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 789963 - 790036
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||| ||||||||||||||  |||||||||||||||| ||||||||  |||| |||||| ||||||||| ||||    
T  789963 atttttacctttgggtgtacaacatatatatgacaccttgtatttattgttta-aaaaatttaaatagaagattg 790036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 25855449 - 25855521
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||| ||||||||| ||| |||||||| ||||||| ||||| |||||||| |||||| ||||||||||||||    
T  25855449 attttcaactttgggtgcactacatatatacgacaccttgtatt-atctttta-aaaaatttaaatagaacattg 25855521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 23641382 - 23641329
Alignment:
Q  223 tgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaa 277  Q
    ||||| ||||||||| ||||| | |||||||||||||| ||||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatctttta-aaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 49393117 - 49393189
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||| ||||||||||||||  |||||||| ||| ||| |||||||||||||| |||||| |||| |||||||||    
T  49393117 atttttacctttgggtgtaca-catatatacgacgccttgtatttatctttta-aaaaatttaaagagaacattg 49393189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 54574906 - 54574833
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||| || ||||||||||| ||||||||| |  |||| |||||||| |||| ||||||| ||||||||||||||    
T  54574906 atttttacttttgggtgtaccgcatatatacggtaccttgtatttatatttt-gaaaaatttaaatagaacattg 54574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 28689440 - 28689368
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    |||||||||||||| | ||  ||||||||| | ||||| ||||||||||||| | ||||| |||||||||||||    
T  28689440 attttcacctttggatatatcgcatatatacggcaccttgtatttatctttttg-aaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 44655774 - 44655936
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||| ||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  44655774 tcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaatta-tgttt 44655871  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44655872 tgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccctg 44655936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 5027582 - 5027746
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgct-ttttnnnnnnnnnnnntgtt 304  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||             |||    
T  5027582 tcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaaaatacgtt 5027680  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  5027681 ttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccctg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 6771824 - 6771990
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnnt--gt 303  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||               ||    
T  6771824 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctctttaaaaaaaaaaaacacgt 6771922  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6771923 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctgc 6771990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 17168989 - 17169151
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| |||||||||  ||||||  ||||||||||||| |||||||||||||||||||||||||||             ||||    
T  17168989 tcattttcacctttgggtgtaccgcatatatacaacaccttatatttatctttta-aaaaatataaatagaacattgctttttttaaaaaaatac-gttt 17169086  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  17169087 tgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccctg 17169151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 23185460 - 23185622
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  23185460 tcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 23185557  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  23185558 tgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctg 23185622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 22865558 - 22865377
Alignment:
Q  188 atattatggatttgagactcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttt 287  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||   || || |||||||||||||| ||||||||||||||||||||||| ||    
T  22865558 atattatgcatttgagacttattttcacctttgggtgtaccg-atatatagagcatcttgtatttatctttta-aaaaatataaatagaacattgctctt 22865461  T
Q  288 tnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |             ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  22865460 ttgaaaaaaaatacgttttgattttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctgc 22865377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 14146333 - 14146496
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||| || ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  14146333 tcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaatac-gttt 14146430  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  14146431 tgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccctgc 14146496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 19955750 - 19955912
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||||||||| ||||||||| |  ||||  ||||||||||||| ||||||||||||||| |||||||||||             ||||    
T  19955750 tcattttcacctttgggtgtaccgcatatatacggtaccttatatttatctttta-aaaaatataaatagatcattgctttttaaaaaaaaattc-gttt 19955847  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || ||||||    
T  19955848 tgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccctg 19955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 40501870 - 40501707
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||| |||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||||||| |||| ||||||             ||||    
T  40501870 tcatttttacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagatcattactttttttttaaaaaatacgttt 40501772  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||| |||||||||    
T  40501771 tgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccctg 40501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 50881463 - 50881621
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | | ||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||            |  ||    
T  50881463 tcattttcacctctagatgtaccgcatatatacgacaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaatagat--tt 50881559  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  50881560 taattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 9173103 - 9172940
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||| ||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||              |||    
T  9173103 tcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgttttttaaaacaaaaatacattt 9173005  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | | |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  9173004 ttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 9181085 - 9180922
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||||||| ||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||| |||||              |||    
T  9181085 tcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgttttttaaaacaaaaatacattt 9180987  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | | |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  9180986 ttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 21741017 - 21740852
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntg--t 303  Q
    |||||||||||| ||||||||  ||||||||| | ||||| |||||||||||||| ||||||| ||||||||||||||| |||            |   |    
T  21741017 tcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttta-aaaaatacaaatagaacattgctcttttaaaaaaaaaaatacat 21740919  T
Q  304 tttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  21740918 tttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctg 21740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 360
Target Start/End: Original strand, 16140088 - 16140240
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| | ||||||| |||||||||  |||||| |||||||||||||| |||||||||||||||||||  || |||             ||||    
T  16140088 tcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatctttta-aaaaatataaatagaacatcactcttttaaaaaaaatac-gttt 16140185  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagg 360  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16140186 tgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagg 16140240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 27906774 - 27906645
Alignment:
Q  241 cacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttttgattttatcactggcctcttttcattcccagagc 340  Q
    ||||| |||||||||||||| |||||||||||| |||||||||| |||            ||||||||||||||||||||||||||||||||  ||||||    
T  27906774 caccttgtatttatctttta-aaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagc 27906676  T
Q  341 cgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||||||||| ||||||||||    
T  27906675 cgagcctccgaattctcagggacggccctgc 27906645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 5316713 - 5316875
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  5316713 tcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaaatac-gttt 5316810  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| |||||||||||||| |  | ||||||||| |||||||||| |||||||||    
T  5316811 tgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccctg 5316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 4971698 - 4971536
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| | ||||||||| ||||||||| |  |||| |||||||||||||| ||||||||||||||||||||||| |||            |||||    
T  4971698 tcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatctttta-aaaaatataaatagaacattgctctttaaaaaaaaata-tgttt 4971601  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||||||||||| |||||||||||||| || ||||||||| ||||||||||| || ||||||    
T  4971600 tgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctg 4971536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 27559670 - 27559751
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgcttttt 288  Q
    |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  27559670 tcattttcacctttgggtgtaccgcatatatacgacaccttatatttatctttta-aaaaatataaatagaacattgcttttt 27559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 3406451 - 3406614
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||||  | |||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  3406451 tcattttcacctccgagtgtactgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaaacgttt 3406549  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | |||||||||||| ||||||||||||||| |||| |||||||| |||||||||| || ||||||    
T  3406550 tcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Complemental strand, 3440369 - 3440206
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||||||  | |||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  3440369 tcattttcacctccgagtgtactgcatatatacggcaccttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaaaaacgttt 3440271  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    | |||||||||||| ||||||||||||||| |||| |||||||| |||||||||| || ||||||    
T  3440270 tcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3440206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 6889644 - 6889805
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||| ||||| ||||||||| || || | |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  6889644 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaatac--gttt 6889740  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||| | |||||||||    
T  6889741 tgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 6891490 - 6891651
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||||| ||| ||||| ||||||||| || || | |||||||||||||| ||||||||||||||||||||||| |||             ||||    
T  6891490 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatctttta-aaaaatataaatagaacattgctcttttaaaaaaatac--gttt 6891586  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||| | |||||||||    
T  6891587 tgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 206 - 355
Target Start/End: Complemental strand, 1366958 - 1366812
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||| |||||||||||| ||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||| ||             |||||    
T  1366958 tcattttcatctttgggtgtaccgcatatatacggcaccttatatttatctttta-aaaaatataaatagaacattgctctt--aaaaaaaaatatgttt 1366862  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattc 355  Q
    | | ||||||||||||||||||||||||||||||| |||||||| |||||    
T  1366861 tcaatttatcactggcctcttttcattcccagagctgagcctccaaattc 1366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 372
Target Start/End: Complemental strand, 51607520 - 51607356
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgac-acctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgtt 304  Q
    |||||||||| ||||||||||| ||||||||| | | ||||  ||||||||||||| ||||||||||||| ||||||  |||||             |||    
T  51607520 tcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatctttta-aaaaatataaataaaacatt--ttttttttaaaaaaatacgtt 51607424  T
Q  305 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgca 372  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| |||| ||||||    
T  51607423 ttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacggtcctgca 51607356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 353
Target Start/End: Complemental strand, 41697217 - 41697072
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    |||||||||| | ||| ||||||||||||||| || || | |||||||||||||| ||||||||||||||||||| ||| |||             ||||    
T  41697217 tcattttcacttctggatgtactgcatatatacgatactttgtatttatctttta-aaaaatataaatagaacatcgctcttttaaaaaaaatac-gttt 41697120  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaat 353  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41697119 tgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 13913465 - 13913401
Alignment:
Q  303 ttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggcc 367  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||| ||||||    
T  13913465 ttttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggcc 13913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 34247154 - 34247210
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctca 358  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  34247154 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctca 34247210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 38547114 - 38547041
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| |||||||||||  |||||||| | ||||| |||||||||||||| |||||| ||||||||||||||    
T  38547114 attttcacatttgggtgtaccacatatatacggcaccttgtatttatctttta-aaaaatttaaatagaacattg 38547041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 39134797 - 39134727
Alignment:
Q  212 tcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||||||||||||| ||||||||||   ||||| |||||||||||||  |||||| ||||||||||||||    
T  39134797 tcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattg 39134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 52127519 - 52127460
Alignment:
Q  311 ttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||||||||| |||| ||||    
T  52127519 ttatcaccggcctccttttaatcccagagccgagcctccgaattctcagggacggtcctg 52127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 43235848 - 43235774
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttt-tagaaaaatataaatagaacatt 281  Q
    ||||||||||||||||||||  |||||||| |||| || ||||||||||||  | |||||| |||||||||||||    
T  43235848 attttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 44895774 - 44895827
Alignment:
Q  301 tgttttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 354  Q
    |||||||||||| |||| | |||||||||||||||||| |||| ||||||||||    
T  44895774 tgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatt 44895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 38853557 - 38853627
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaaca 279  Q
    |||||||||||||| | |||  |||||||| ||||||| ||||||||| |||| |||||| |||||||||||    
T  38853557 attttcacctttggatatacaacatatatacgacaccttgtatttatcattta-aaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 5533347 - 5533421
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||  |||||  |||||||| | ||||| || ||||||||||| |||||| ||||||||| ||||    
T  5533347 attttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattg 5533421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 45758529 - 45758602
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||||||||| ||||   ||||||||  |||||| | |||||||||||| |||||| ||||||||||||||    
T  45758529 attttcacctttggatgtataacatatatacaacaccttgcatttatctttta-aaaaatttaaatagaacattg 45758602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 13913562 - 13913479
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatat--gacacctcgtatttatcttttagaaaaatataaatagaacattgcttttt 288  Q
    |||||||||| ||| ||||||| |||||||||   | || ||  ||||||||||||| ||||||||||||||| |||||||||||    
T  13913562 tcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatctttta-aaaaatataaatagatcattgcttttt 13913479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 1365 - 1528
Alignment:
Q  206 tcattttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttttnnnnnnnnnnnntgttt 305  Q
    ||||||||| || ||||||||| ||||||||| | || || |||||||||||||| |||||||||||||||||| |||| |||             ||||    
T  1365 tcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatctttta-aaaaatataaatagaacagtgctcttttaaaaaaaatac-gttt 1462  T
Q  306 tgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctgc 371  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1463 tgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctgc 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 183176 - 183244
Alignment:
Q  302 gttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcaggaacggccctg 370  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  183176 gttttaattttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 337 - 264
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||||||| ||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  337 attttcacatttgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattg 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 24072 - 23999
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    |||||||| ||||||||||| ||||||||| ||||||| |||||||||||||| |||||| ||||||||| ||||    
T  24072 attttcacttttgggtgtaccgcatatatacgacaccttgtatttatctttta-aaaaatttaaatagaatattg 23999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 206568 - 206496
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacatt 281  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||  ||||| |||||||||||||    
T  206568 attttcaccattgggtgtaccgcatatatacgacaccttgtatttatctttta-caaaatttaaatagaacatt 206496  T

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Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 38949 - 39027
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattgctttt 287  Q
    |||||||| |||| |||||  ||||||||| ||||||| |||||||||||||| |||||| |||||||||||||| ||||    
T  38949 attttcacatttgtgtgtatcgcatatatacgacaccttgtatttatctttta-aaaaatttaaatagaacattgttttt 39027  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 351413 - 351361
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatctttta 260  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatctttta 351361  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 173589 - 173516
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaatataaatagaacattg 282  Q
    ||||| |||||||||||||  ||||||||| |  |||| |||||||||||||| |||||| ||||||||||||||    
T  173589 atttttacctttgggtgtatcgcatatatacggtaccttgtatttatctttta-aaaaatttaaatagaacattg 173516  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 40109 - 40184
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaata-taaatagaacattg 282  Q
    ||||||||||| ||||||||  |||| ||| | ||||| |||||||||||||| ||||| | ||||||||||||||    
T  40109 attttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 40184  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 138169 - 138244
Alignment:
Q  208 attttcacctttgggtgtactgcatatatatgacacctcgtatttatcttttagaaaaata-taaatagaacattg 282  Q
    ||||||||||| ||||||||  |||| ||| | ||||| |||||||||||||| ||||| | ||||||||||||||    
T  138169 attttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 138244  T

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