View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18606_low_6 (Length: 418)

Name: NF18606_low_6
Description: NF18606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18606_low_6
NF18606_low_6
[»] chr4 (34 HSPs)
chr4 (139-415)||(15192232-15192506)
chr4 (133-414)||(27302808-27303086)
chr4 (278-414)||(25315180-25315316)
chr4 (196-414)||(9782853-9783068)
chr4 (160-410)||(18898025-18898264)
chr4 (182-407)||(10320075-10320297)
chr4 (135-414)||(34864104-34864376)
chr4 (278-388)||(17026645-17026755)
chr4 (160-339)||(12111160-12111335)
chr4 (160-290)||(51884756-51884884)
chr4 (132-375)||(5676268-5676510)
chr4 (160-404)||(47024598-47024831)
chr4 (197-414)||(19601828-19602043)
chr4 (325-414)||(1676291-1676380)
chr4 (325-414)||(1682819-1682908)
chr4 (276-417)||(21167756-21167897)
chr4 (285-414)||(9288240-9288368)
chr4 (306-407)||(26159793-26159893)
chr4 (278-410)||(23353657-23353787)
chr4 (335-401)||(46647239-46647305)
chr4 (341-410)||(1695859-1695928)
chr4 (277-322)||(24285580-24285625)
chr4 (196-367)||(31859769-31859938)
chr4 (165-241)||(1695684-1695760)
chr4 (324-414)||(22119676-22119766)
chr4 (168-233)||(17026537-17026602)
chr4 (193-241)||(5906628-5906676)
chr4 (355-414)||(12111357-12111417)
chr4 (331-414)||(10576483-10576566)
chr4 (380-414)||(5906771-5906805)
chr4 (324-414)||(13275739-13275829)
chr4 (331-413)||(17339815-17339897)
chr4 (385-414)||(4953712-4953741)
chr4 (341-414)||(24925835-24925908)
[»] chr7 (37 HSPs)
chr7 (164-414)||(29544549-29544798)
chr7 (278-410)||(7142132-7142264)
chr7 (141-408)||(21471833-21472096)
chr7 (160-407)||(9801707-9801952)
chr7 (141-407)||(7815360-7815624)
chr7 (193-412)||(23124932-23125150)
chr7 (278-414)||(1255162-1255298)
chr7 (160-414)||(20470642-20470895)
chr7 (278-407)||(9761364-9761493)
chr7 (181-414)||(22067656-22067891)
chr7 (327-414)||(21545797-21545884)
chr7 (304-401)||(5312761-5312857)
chr7 (112-241)||(20017154-20017282)
chr7 (285-404)||(10292794-10292913)
chr7 (285-414)||(1074482-1074611)
chr7 (329-410)||(2632436-2632517)
chr7 (134-398)||(7494752-7495002)
chr7 (141-223)||(7493532-7493614)
chr7 (278-414)||(3268915-3269050)
chr7 (278-414)||(8308981-8309115)
chr7 (304-414)||(7372540-7372651)
chr7 (347-417)||(9066159-9066227)
chr7 (332-414)||(315215-315297)
chr7 (130-232)||(21545629-21545731)
chr7 (361-414)||(9755830-9755883)
chr7 (361-414)||(9800626-9800679)
chr7 (332-401)||(37144963-37145032)
chr7 (278-401)||(4977769-4977892)
chr7 (304-401)||(7361607-7361705)
chr7 (324-414)||(12358756-12358846)
chr7 (341-414)||(4828821-4828894)
chr7 (341-401)||(7956224-7956284)
chr7 (284-384)||(24596959-24597058)
chr7 (338-414)||(46054728-46054804)
chr7 (165-223)||(315392-315450)
chr7 (324-410)||(17881493-17881579)
chr7 (304-414)||(20461623-20461732)
[»] chr1 (36 HSPs)
chr1 (165-410)||(11769831-11770075)
chr1 (181-414)||(30675514-30675745)
chr1 (147-414)||(26657506-26657771)
chr1 (188-414)||(25494349-25494564)
chr1 (279-414)||(8247607-8247742)
chr1 (160-414)||(50047211-50047457)
chr1 (278-403)||(25727858-25727983)
chr1 (278-403)||(25736266-25736391)
chr1 (182-414)||(18300857-18301088)
chr1 (165-414)||(23519606-23519840)
chr1 (120-404)||(30781800-30782082)
chr1 (320-407)||(25266336-25266423)
chr1 (182-414)||(23223441-23223674)
chr1 (330-414)||(12423915-12423999)
chr1 (278-413)||(25730520-25730655)
chr1 (348-414)||(12810352-12810418)
chr1 (279-414)||(26102087-26102221)
chr1 (279-414)||(34381738-34381875)
chr1 (160-241)||(12423747-12423828)
chr1 (199-417)||(26854191-26854405)
chr1 (278-410)||(31313586-31313717)
chr1 (279-414)||(19257754-19257888)
chr1 (329-398)||(21548694-21548763)
chr1 (278-414)||(15416923-15417058)
chr1 (278-414)||(18391112-18391247)
chr1 (331-410)||(21451818-21451897)
chr1 (161-241)||(9353213-9353293)
chr1 (334-414)||(27461186-27461266)
chr1 (193-241)||(52271110-52271158)
chr1 (371-414)||(25373816-25373859)
chr1 (280-414)||(18795211-18795344)
chr1 (341-414)||(19884202-19884275)
chr1 (165-241)||(9328368-9328444)
chr1 (196-232)||(23505966-23506002)
chr1 (278-330)||(23521678-23521730)
chr1 (196-232)||(25126690-25126726)
[»] chr5 (34 HSPs)
chr5 (132-410)||(26329874-26330149)
chr5 (160-403)||(22229845-22230086)
chr5 (182-414)||(24841783-24842013)
chr5 (160-407)||(11274162-11274408)
chr5 (165-414)||(16634076-16634324)
chr5 (168-414)||(25594533-25594777)
chr5 (160-414)||(17027557-17027809)
chr5 (323-414)||(15205673-15205764)
chr5 (278-414)||(26070504-26070639)
chr5 (112-414)||(16622460-16622752)
chr5 (324-414)||(18222523-18222613)
chr5 (141-414)||(25680626-25680888)
chr5 (278-414)||(12339963-12340099)
chr5 (344-414)||(24268585-24268655)
chr5 (344-414)||(24345214-24345284)
chr5 (332-414)||(24517384-24517466)
chr5 (324-409)||(29150900-29150985)
chr5 (287-414)||(17382002-17382120)
chr5 (306-398)||(16603590-16603682)
chr5 (278-414)||(20694670-20694805)
chr5 (278-414)||(24410879-24411014)
chr5 (165-339)||(30072220-30072393)
chr5 (324-414)||(19331541-19331629)
chr5 (191-301)||(18452675-18452784)
chr5 (287-367)||(22754971-22755051)
chr5 (324-414)||(20083495-20083585)
chr5 (191-414)||(7742733-7742954)
chr5 (196-241)||(19763754-19763799)
chr5 (333-414)||(23157792-23157873)
chr5 (304-384)||(25367654-25367733)
chr5 (195-232)||(22643772-22643809)
chr5 (285-346)||(25075268-25075329)
chr5 (285-346)||(25133237-25133298)
chr5 (326-414)||(22967839-22967927)
[»] chr6 (13 HSPs)
chr6 (154-414)||(15574954-15575212)
chr6 (182-414)||(17860303-17860533)
chr6 (183-414)||(15998541-15998769)
chr6 (332-414)||(16527920-16528002)
chr6 (278-356)||(24507391-24507469)
chr6 (345-414)||(13759467-13759536)
chr6 (329-414)||(20495794-20495878)
chr6 (329-407)||(26512777-26512855)
chr6 (329-407)||(26517893-26517971)
chr6 (304-401)||(12972360-12972456)
chr6 (191-262)||(26499710-26499779)
chr6 (332-407)||(30355363-30355437)
chr6 (324-414)||(9943144-9943234)
[»] chr2 (30 HSPs)
chr2 (164-414)||(30998801-30999049)
chr2 (141-367)||(27417076-27417301)
chr2 (278-414)||(35031732-35031868)
chr2 (193-414)||(21505004-21505224)
chr2 (182-406)||(16593605-16593827)
chr2 (320-414)||(19949545-19949639)
chr2 (197-414)||(25474067-25474282)
chr2 (196-398)||(18236171-18236371)
chr2 (286-414)||(17152183-17152311)
chr2 (322-414)||(28278416-28278508)
chr2 (141-414)||(35707833-35708104)
chr2 (333-410)||(21843006-21843083)
chr2 (278-399)||(27917932-27918053)
chr2 (304-414)||(19541067-19541176)
chr2 (324-414)||(34063840-34063930)
chr2 (278-410)||(24188000-24188135)
chr2 (285-401)||(22510989-22511104)
chr2 (182-225)||(15829348-15829391)
chr2 (284-398)||(17240812-17240923)
chr2 (154-223)||(1733310-1733379)
chr2 (341-410)||(24047416-24047485)
chr2 (278-414)||(21849023-21849157)
chr2 (179-225)||(19949376-19949422)
chr2 (332-413)||(1733131-1733212)
chr2 (332-414)||(15829164-15829242)
chr2 (341-410)||(18818731-18818800)
chr2 (346-410)||(21844646-21844710)
chr2 (278-410)||(39730481-39730612)
chr2 (332-398)||(32619684-32619750)
chr2 (278-315)||(1732679-1732716)
[»] chr8 (32 HSPs)
chr8 (141-414)||(28902119-28902390)
chr8 (278-414)||(32239317-32239453)
chr8 (160-410)||(16054328-16054576)
chr8 (160-407)||(16052109-16052355)
chr8 (279-414)||(24584675-24584809)
chr8 (284-414)||(5570096-5570226)
chr8 (286-410)||(26882442-26882566)
chr8 (147-387)||(24696638-24696878)
chr8 (344-414)||(28901355-28901425)
chr8 (304-410)||(29047294-29047400)
chr8 (278-414)||(22894480-22894615)
chr8 (279-414)||(14977059-14977192)
chr8 (320-414)||(13081928-13082022)
chr8 (324-406)||(35135417-35135499)
chr8 (284-414)||(27097755-27097886)
chr8 (332-414)||(12956519-12956601)
chr8 (304-414)||(14424788-14424897)
chr8 (305-414)||(10867018-10867126)
chr8 (285-401)||(11437462-11437577)
chr8 (278-401)||(28074557-28074678)
chr8 (287-401)||(5153801-5153914)
chr8 (193-393)||(29291821-29292019)
chr8 (160-241)||(11310089-11310169)
chr8 (304-409)||(28260265-28260369)
chr8 (287-398)||(31436525-31436635)
chr8 (128-214)||(24120452-24120537)
chr8 (348-407)||(11310223-11310282)
chr8 (182-241)||(13081789-13081848)
chr8 (278-365)||(28859188-28859275)
chr8 (278-401)||(30543804-30543926)
chr8 (182-223)||(28901204-28901245)
chr8 (196-232)||(30850968-30851004)
[»] scaffold0171 (2 HSPs)
scaffold0171 (182-414)||(21427-21658)
scaffold0171 (182-414)||(6226-6455)
[»] chr3 (35 HSPs)
chr3 (149-414)||(21017907-21018170)
chr3 (160-415)||(25883132-25883385)
chr3 (193-414)||(19219076-19219296)
chr3 (160-410)||(27415205-27415449)
chr3 (284-410)||(2729573-2729699)
chr3 (196-414)||(8402419-8402635)
chr3 (304-414)||(13911295-13911405)
chr3 (278-414)||(11474876-11475012)
chr3 (165-414)||(1475117-1475365)
chr3 (278-401)||(12573333-12573456)
chr3 (278-401)||(13549797-13549920)
chr3 (278-414)||(33914516-33914647)
chr3 (346-414)||(12409488-12409556)
chr3 (278-414)||(28422483-28422618)
chr3 (287-414)||(11521170-11521296)
chr3 (176-330)||(18065910-18066063)
chr3 (160-241)||(11521366-11521447)
chr3 (324-414)||(30493259-30493349)
chr3 (332-413)||(10341826-10341907)
chr3 (321-414)||(23007057-23007150)
chr3 (196-414)||(18474201-18474416)
chr3 (274-414)||(21829078-21829217)
chr3 (320-414)||(4775698-4775792)
chr3 (278-413)||(23908220-23908354)
chr3 (335-398)||(26297795-26297858)
chr3 (332-401)||(5632536-5632605)
chr3 (160-241)||(10341988-10342069)
chr3 (378-414)||(18065846-18065882)
chr3 (285-393)||(26797205-26797311)
chr3 (320-406)||(4780678-4780764)
chr3 (332-414)||(19263901-19263983)
chr3 (324-414)||(26387839-26387929)
chr3 (196-241)||(19542992-19543037)
chr3 (332-414)||(25919465-25919549)
chr3 (191-223)||(19263767-19263799)
[»] scaffold0011 (1 HSPs)
scaffold0011 (196-414)||(228055-228269)
[»] scaffold0188 (1 HSPs)
scaffold0188 (179-413)||(26806-27038)
[»] scaffold0386 (3 HSPs)
scaffold0386 (278-404)||(13020-13146)
scaffold0386 (278-403)||(8658-8783)
scaffold0386 (132-238)||(8513-8619)
[»] scaffold0650 (1 HSPs)
scaffold0650 (149-325)||(5591-5765)
[»] scaffold0065 (1 HSPs)
scaffold0065 (278-356)||(12332-12410)
[»] scaffold0362 (1 HSPs)
scaffold0362 (134-262)||(7801-7927)
[»] scaffold0337 (1 HSPs)
scaffold0337 (278-356)||(1896-1974)
[»] scaffold0036 (1 HSPs)
scaffold0036 (281-351)||(29291-29359)
[»] scaffold0282 (2 HSPs)
scaffold0282 (380-414)||(22596-22630)
scaffold0282 (160-241)||(22446-22527)
[»] scaffold0190 (1 HSPs)
scaffold0190 (196-232)||(11566-11602)


Alignment Details
Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 139 - 415
Target Start/End: Complemental strand, 15192506 - 15192232
Alignment:
Q  139 tatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagcctt 238  Q
    ||||||||||||| |||| | |||||||||||| ||||| | ||||||||||| || |||||||||||| ||||||||||| ||| | ||||| | ||||    
T  15192506 tatcttgtgttttcgtcccgttttcgatcgttcttccgtctaaaaactcctaggaacttgaaatgaattgtcttcactttgaattgtcttcaacaacctt 15192407  T
Q  239 ctagaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaaca 338  Q
    |||  ||| ||||||||||||||| ||| | | | ||| ||||| ||||||||||| ||||||  |||||||||||| || |||||||||||||||||||    
T  15192406 cta--agaaccattggtcttcaatttcatatccttgatccttcacgtgatgtcttggtttgtcgatttacatgatttctcactacaaaacactcaaaaca 15192309  T
Q  339 cttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaa 415  Q
    | ||||||| |||| |||||| ||||||| | ||||||||| ||| ||||||||||||||||||||||||| |||||    
T  15192308 cctatggagctgcacgatctaggataaaagtgaattacaacaacttgagtgaaaacaatacaatatgttccacaaaa 15192232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 414
Target Start/End: Complemental strand, 27303086 - 27302808
Alignment:
Q  133 gtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    ||||||| ||||||||||| |||| | |||||||||||| ||||| ||||||||||||| || || |||||||||||||||||||| || | | ||||||    
T  27303086 gtgtgatttcttgtgttttcgtcccgttttcgatcgttcttccgtctgaaaactcctaggaacttaaaatgaattttcttcactttataatgtcttcaaa 27302987  T
Q  233 agccttctagaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactc 332  Q
    | |||||||  ||| || ||  | |||||| ||| | | | |||  | || |||||||||| |||||||  |||||||||||  || |||||||| |||     
T  27302986 aaccttcta--agaacccttaatgttcaatttcatatccttgatcttgcacgtgatgtcttaatttgtcgatttacatgattcatcactacaaaatacta 27302889  T
Q  333 aaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||  ||| ||||||||||||||  ||| || | |||||||| |||||||||||||||||||||| ||||||||||||    
T  27302888 aaaacacc-atgaagttgcatgatctagtatataattgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaa 27302808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 25315180 - 25315316
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||| ||||||||||||||||  |||||||||||  || |||||||  ||||||||| | ||||||||||||||||||| ||||||| | |||||||    
T  25315180 cttcatgcgatgtcttgatttgtcgatttacatgattcctcactacaaattactcaaaacccatatggagttgcatgatctaggataaaacttaattaca 25315279  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| |||||||||||||||||||||||||||||    
T  25315280 acgactcaagtgaaaacaatacaatatgttcctcaaa 25315316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 414
Target Start/End: Original strand, 9782853 - 9783068
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttga 295  Q
    |||||||||||||||||||||||| ||||| || | || |||||||  ||| || ||| ||||||||    || ||| ||| || ||  |||||||||||    
T  9782853 ttgaaatgaattttcttcactttgcatttttttaacaa-ccttcta--agaacccttgatcttcaattcttcatctttgatcctccacatgatgtcttga 9782949  T
Q  296 tttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaaca 395  Q
    |||||   |||||||||||  || ||||||||||||| ||| || |||||||||||||||||||| |||||| | |||||||| || | |||||||||||    
T  9782950 tttgttgatttacatgattcctcactacaaaacactctaaaaacctatggagttgcatgatctaaaataaaactgaattacaatgaattgagtgaaaaca 9783049  T
Q  396 atacaatatgttcctcaaa 414  Q
    |||||||||||||||||||    
T  9783050 atacaatatgttcctcaaa 9783068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 410
Target Start/End: Complemental strand, 18898264 - 18898025
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| | ||| |||||| |||||| || ||||||||||||||||| |||||||||| ||||||||| |||| |  |||| ||| | | ||||    
T  18898264 tttcgatcgttcttacgtctgaaaaatcctaggaacttgaaatgaattttctttactttgtattgtattcaaaaacctttt--aagaaccact-gacttc 18898168  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | || ||| ||||| ||||||||||||||||||||||||  |||||||||||| || |||         |||||||| |||| ||||||||  |||    
T  18898167 aatctgcataccctggatccttcatgtgatgtcttgatttgtcgatttacatgatttctcacta---------caaaacacctatgaagttgcatagtct 18898077  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    | || ||||   |||||||||| |||||||||||||||||||||||||||||    
T  18898076 atgaaaaaagcgaattacaacggctcgagtgaaaacaatacaatatgttcct 18898025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 407
Target Start/End: Original strand, 10320075 - 10320297
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatactt 280  Q
    |||||||||| || ||||||| |||||||||||||||||||| | ||| ||  |||||||  | | |||||   ||||||| | |||| | | ||| |||    
T  10320075 aaactcctaggaacttgaaataaattttcttcactttgtattgttttcgaagaccttcta--acaaccattaa-cttcaattttcacatccttgatcctt 10320171  T
Q  281 catgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacg 380  Q
    ||||| |||||| ||||||||| ||||| |||||| || ||||||||  || ||||||| |||||||||||||| |||| ||||||| | ||||||||||    
T  10320172 catgttatgtct-gatttgtcaatttacctgatttctcactacaaaaagcttaaaacacctatggagttgcatggtctaggataaaagtgaattacaacg 10320270  T
Q  381 actcgagtgaaaacaatacaatatgtt 407  Q
    ||||||||||||| |||||||||||||    
T  10320271 actcgagtgaaaagaatacaatatgtt 10320297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 135 - 414
Target Start/End: Original strand, 34864104 - 34864376
Alignment:
Q  135 gtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaag 234  Q
    |||| ||||||||||||  ||||| |||||||| ||  ||| | |||||||| |||| || || |||||||||||||||| |||||||| | | |||||     
T  34864104 gtgaaatcttgtgttttc-tcctgttttcgatcatttttccatctgaaaacttctaggaactttaaatgaattttcttcattttgtattgtctacaaaaa 34864202  T
Q  235 ccttctagaagagccattggtcttcaatatc-acaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactca 333  Q
    |||||||  ||| ||||||  ||||||| || | | ||| ||| ||||| ||||||||||||||||||  |||||||||||| || ||||||||||||||    
T  34864203 ccttcta--agaaccattga-cttcaatctccatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactca 34864299  T
Q  334 aaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||  |||||||| ||| || || ||||||| | |||||||| ||  |||||||||||||||  ||| ||||||||||    
T  34864300 aaacac--atggagtttcataatttaggataaaagtgaattacaatga--cgagtgaaaacaatatgatacgttcctcaaa 34864376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 278 - 388
Target Start/End: Original strand, 17026645 - 17026755
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||||||||||||| |||||||  |||||||||||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||    
T  17026645 cttcatgtgatgtcttaatttgtcgatttacatgatttatgactacaaaacactcaaaacacctatggagttgcatgatctaggataaaagtgaattaca 17026744  T
Q  378 acgactcgagt 388  Q
    || ||||||||    
T  17026745 acaactcgagt 17026755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 160 - 339
Target Start/End: Original strand, 12111160 - 12111335
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||| | || |||| |||  || |||| ||||| | ||||    
T  12111160 tttcgatcattcttctgtttgaaaactcctagaaacttgaaatgaattttcttcactttgtattatcttaaaaaacct--tataagaaccatt-gacttc 12111256  T
Q  260 aata-tcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacac 339  Q
    |||| ||| | ||| ||| ||||| |||||| |||||||||||  |||||| || || || ||||||||||||||||||||    
T  12111257 aatattcatatctt-gatccttcacgtgatgacttgatttgtcgatttacaaga-ttctcactacaaaacactcaaaacac 12111335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 51884884 - 51884756
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| ||||| ||||||||| ||| || ||||||| |||||||||||||||||||| ||||||| |  |||||  ||||||| ||| |||||    
T  51884884 tttcgatcgttcttccgtctgaaaactcataggaacttgaaattaattttcttcactttgtattgtattcaacaatcttct--aagagcccttgatcttc 51884787  T
Q  260 aatatcacaccttggatacttcatgtgatgt 290  Q
    ||| ||| | ||| ||| |||||||||||||    
T  51884786 aatttcatatctttgatccttcatgtgatgt 51884756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 375
Target Start/End: Complemental strand, 5676510 - 5676268
Alignment:
Q  132 tgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaa 231  Q
    |||||||  ||||| ||||| |||| | ||||||| |||| ||||| |  |||||||||| || | |||||||||||||||||  ||||||| | |||||    
T  5676510 tgtgtgaattcttgcgttttcgtcccgttttcgattgttcttccgtctagaaactcctagtaactcgaaatgaattttcttcatcttgtattgtcttcaa 5676411  T
Q  232 aagccttctagaagagccattggtcttcaatatcac-accttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacac 330  Q
    || |||||||  |||  |||| || |||||  | |  | | | ||| ||||||||||||||||||||| ||| |||||||||||  || ||| |||| ||    
T  5676410 aaaccttcta--agaatcatttgtattcaaacttaatatccttgatccttcatgtgatgtcttgatttatcaatttacatgattcatcactaaaaaatac 5676313  T
Q  331 tcaaaacacttatggagttgcatgatctaagataaaaataaatta 375  Q
    ||||||||| ||||||||||||  || || ||||||||| |||||    
T  5676312 tcaaaacacctatggagttgcacaatttaggataaaaatgaatta 5676268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 404
Target Start/End: Original strand, 47024598 - 47024831
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| ||| | ||||||||||||| || ||||||| |||| ||||||||||||| | | ||||||| |||||||  ||| ||||||  ||||    
T  47024598 tttcgatcgttcttccatctgaaaactcctaggaacttgaaataaattctcttcactttgtactgttttcaaaaaccttcta--agaaccattga-cttc 47024694  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | ||   | | ||| ||||||| ||||||||||||| ||  |||||||||||| || |||||||||||        | | || |||||||||||||    
T  47024695 aatcttcatgtccttgatccttcatgcgatgtcttgatttttcgatttacatgatttctcactacaaaacac--------cat-tgaagttgcatgatct 47024785  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatat 404  Q
    | ||||||| | ||||| |||| |||||||||||||||||||||||    
T  47024786 aggataaaagtgaattagaacggctcgagtgaaaacaatacaatat 47024831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 414
Target Start/End: Complemental strand, 19602043 - 19601828
Alignment:
Q  197 tgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaat-atcacaccttggatacttcatgtgatgtcttga 295  Q
    ||||||||||||||| |||||| |||| | ||||||| |||| ||  ||| |||||| |||||||| |||| | | | |||  |||| ||||||||||||    
T  19602043 tgaaatgaattttctccactttttattgtcttcaaaaacctttta--agaaccattg-tcttcaatcatcatatcctcgatctttcacgtgatgtcttga 19601947  T
Q  296 tttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaaca 395  Q
    |||||   |||||||||||| || ||| ||||| || |||| || |||||||||||||||| || ||||||| | ||||||||| | | || |||||| |    
T  19601946 tttgttgatttacatgatttctcactagaaaacgctaaaaatacctatggagttgcatgatttaggataaaagtgaattacaacaatttgaatgaaaaaa 19601847  T
Q  396 atacaatatgttcctcaaa 414  Q
    ||| || | ||||||||||    
T  19601846 atagaaaaagttcctcaaa 19601828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 1676291 - 1676380
Alignment:
Q  325 aaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||||||  |||||||||||||||| || ||||||| | ||||||||  |||||| |||||||| ||||||||||||||||||    
T  1676291 aaacactgaaaacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaa 1676380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 1682819 - 1682908
Alignment:
Q  325 aaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||||||  |||||||||||||||| || ||||||| | ||||||||  |||||| |||||||| ||||||||||||||||||    
T  1682819 aaacactgaaaacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaa 1682908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 417
Target Start/End: Complemental strand, 21167897 - 21167756
Alignment:
Q  276 tacttcatgtgatgtcttgatttgtcag-tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaatt 374  Q
    ||||||| || |||||||| ||| || | |||||||||||| || ||| ||||  |||||||||| |||| |||| |||  | || ||||||| ||||||    
T  21167897 tacttcacgttatgtcttgttttttccgatttacatgatttctcacta-aaaagtctcaaaacacctatgaagttacatattttaggataaaagtaaatt 21167799  T
Q  375 acaacgactcgagtgaaaacaatacaatatgttcctcaaaaca 417  Q
    ||||| |||||| |||||||||||||| |||||||| ||||||    
T  21167798 acaacaactcgaatgaaaacaatacaaaatgttccttaaaaca 21167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 414
Target Start/End: Complemental strand, 9288368 - 9288240
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||| |||| |  |||||||||||| || ||| |||| ||| |||| || ||||||| | |||||| || ||||||||| ||||| || |||||    
T  9288368 tgatgtcttgttttgccgatttacatgatttctcacta-aaaagactaaaaaaacatatggaggtacatgatttatgataaaaatgaattataatgactc 9288270  T
Q  385 gagtgaaaacaatacaatatgttcctcaaa 414  Q
     | ||||||||||||||| |||||||||||    
T  9288269 aaatgaaaacaatacaatttgttcctcaaa 9288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 407
Target Start/End: Complemental strand, 26159893 - 26159793
Alignment:
Q  306 tacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatg 405  Q
    |||||||||| || ||| |||| ||||||||||| |||| ||||| || || || || |||| |||||||||||||||||| |||||||||||||| |||    
T  26159893 tacatgatttttcacta-aaaagactcaaaacacatatgaagttggataatttaggacaaaactaaattacaacgactcgaatgaaaacaatacaaaatg 26159795  T
Q  406 tt 407  Q
    ||    
T  26159794 tt 26159793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 410
Target Start/End: Complemental strand, 23353787 - 23353657
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||| |||| |  |||||||||||| || ||| |||| |||||||||||| ||| |  |||| ||| ||  |||||| | |||||||    
T  23353787 cttcatgtgatgtcttgttttgccgatttacatgatttctcacta-aaaagactcaaaacactcatgaatgtgcacgatttat-ataaaattgaattaca 23353690  T
Q  378 acgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||| |||||||||||||| | ||||||    
T  23353689 acgactcgaatgaaaacaatacaaaaagttcct 23353657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 401
Target Start/End: Complemental strand, 46647305 - 46647239
Alignment:
Q  335 aacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    |||||||||||||||||||||| || ||||||| | ||||||| ||||| || ||||||||||||||    
T  46647305 aacacttatggagttgcatgatttaggataaaagtgaattacaccgactagaatgaaaacaatacaa 46647239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 1695859 - 1695928
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||| | | ||| |||||||||||||||||    
T  1695859 tatggagttgcatgatctaggataaaattgaattacaaagactcaaataaaaccaatacaatatgttcct 1695928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 24285580 - 24285625
Alignment:
Q  277 acttcatgtgatgtcttgatttgtcagtttacatgatttgtctcta 322  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  24285580 acttcatgcgatgtcttgatttgtcagtttacatgatttctctcta 24285625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 367
Target Start/End: Original strand, 31859769 - 31859938
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaata-tcacaccttggatacttcatgtgatgtcttg 294  Q
    ||||||| |||||||||||||||||||| | ||||||  ||||||  |||| |||||| ||||||||| ||| | | | ||| |||||  || |||||||    
T  31859769 ttgaaataaattttcttcactttgtattgtcttcaaataccttct--aagaaccattgatcttcaatattcatatcctcgatccttcacctggtgtcttg 31859866  T
Q  295 atttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaa 367  Q
     ||||    |||||||||||| || ||| |||| ||||||||||| |||| ||||||||||| || |||||||    
T  31859867 ttttgctgatttacatgatttctcacta-aaaagactcaaaacacctatgcagttgcatgatttaggataaaa 31859938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 1695684 - 1695760
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    ||||||| | |||||| |||||||||| || |||||||||||||| ||||||||||||| | ||||| | |||||||    
T  1695684 atcgttctttcgtttgtaaactcctaggaacttgaaatgaattttattcactttgtattgtcttcaacaaccttcta 1695760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 22119766 - 22119676
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||||||| || |||| ||||||||||| |  | ||||| |||||||||| |||||||  ||||||| |||||| |||||||||||    
T  22119766 aaaagactcaaaatacctatgtagttgcatgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcctcaaa 22119676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 17026537 - 17026602
Alignment:
Q  168 gttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaa 233  Q
    |||| ||||| || |||||||||| || ||||||| |||||||||||||||||||| | |||||||    
T  17026537 gttcttccgtctggaaactcctaggaacttgaaattaattttcttcactttgtattgtcttcaaaa 17026602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 5906628 - 5906676
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||||||||||| |||||||||| | ||||||| |||||||    
T  5906628 aatttgaaatgaattttcttaactttgtattatcttcaaaaaccttcta 5906676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 12111357 - 12111417
Alignment:
Q  355 atctaagataaaaataaattacaacgactcgagtg-aaaacaatacaatatgttcctcaaa 414  Q
    ||||| ||||||| | ||||||||||||||| ||| |||| ||||||||||||||||||||    
T  12111357 atctaggataaaagtgaattacaacgactcgtgtgaaaaaaaatacaatatgttcctcaaa 12111417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 10576566 - 10576483
Alignment:
Q  331 tcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||| |||| ||||| || || ||  |||||| | |||||||| ||||||| |||||||||||||| |||||| |||||    
T  10576566 tcaaaacacctatgaagttgtataatttagaataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcttcaaa 10576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 414
Target Start/End: Original strand, 5906771 - 5906805
Alignment:
Q  380 gactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||||| |||||||||||||||    
T  5906771 gactcgagtgaaaacaatataatatgttcctcaaa 5906805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 13275739 - 13275829
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||| ||  |||||| ||||| |  ||| ||| | ||||| |||||||||| |||||||||||||| ||||| ||||||    
T  13275739 aaaagactcaaaacacctacagagttgtatgatttgggatgaaagtgaattataacgactcgaatgaaaacaatacaacatgtttctcaaa 13275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 17339815 - 17339897
Alignment:
Q  331 tcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    ||||||||| |||| | ||||||||| || ||||||| | |||||||| |||| || ||||||  |||||| |||||||||||    
T  17339815 tcaaaacacctatgaaattgcatgatttaggataaaattgaattacaaagactagaatgaaaaagatacaaaatgttcctcaa 17339897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 385 - 414
Target Start/End: Complemental strand, 4953741 - 4953712
Alignment:
Q  385 gagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||||||||||||||||    
T  4953741 gagtgaaaacaatacaatatgttcctcaaa 4953712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 24925908 - 24925835
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||| |||||| || ||||||| | ||||||| |||||| | |||||||||||||| ||||| ||||||    
T  24925908 tatgaagttacatgatttatgataaaagtgaattacagcgactcaaatgaaaacaatacaaaatgttactcaaa 24925835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 164 - 414
Target Start/End: Complemental strand, 29544798 - 29544549
Alignment:
Q  164 gatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaata 263  Q
    |||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||| | ||||||| |||||||  |||  ||||| ||||||||     
T  29544798 gatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttcta--agaatcattgatcttcaatc 29544701  T
Q  264 t-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaaga 362  Q
    | || | ||| ||| ||||||||||||||||| ||||||  |||||||||||  |  ||| ||||||||||||||||||||||| |||||  || || ||    
T  29544700 ttcatatctttgatccttcatgtgatgtcttggtttgtcgatttacatgattccttactaaaaaacactcaaaacacttatggaattgcacaatttagga 29544601  T
Q  363 taaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  29544600 gaaaagtgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 29544549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 278 - 410
Target Start/End: Complemental strand, 7142264 - 7142132
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| ||||||||||||||||||  |||||||||||| || |||||||||||| ||||||| ||||||||||||||||||  ||||||| | |||||||    
T  7142264 cttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatcttggataaaagtgaattaca 7142165  T
Q  378 acgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||||||| ||||| |||||||||||    
T  7142164 acgactcgagtgaaagcaataaaatatgttcct 7142132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 141 - 408
Target Start/End: Complemental strand, 21472096 - 21471833
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    ||||| ||||| |||||| |||||||||||| ||||| ||||||||||||| || ||||||||||||| | |||||||||||||| ||||| | ||||||    
T  21472096 tcttgcgttttcgtcctgttttcgatcgttcttccgtatgaaaactcctaggaacttgaaatgaattt-cgtcactttgtattttcttcaataaccttct 21471998  T
Q  241 agaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacact 340  Q
    |  ||| || ||  ||||||||    || | | ||| | ||| |||||||| |||||| |   |||||||||||  || ||||||||||||||||||||     
T  21471997 a--agaaccctttatcttcaattcttcatccttgatccctcacgtgatgtcatgatttattgatttacatgattcctcactacaaaacactcaaaacacc 21471900  T
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttc 408  Q
    |||||| |||||||||||| |||||||  |||||||||  |||||||||||||||||| |||||||||    
T  21471899 tatggaattgcatgatctaggataaaacaaaattacaa-aactcgagtgaaaacaatataatatgttc 21471833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 407
Target Start/End: Original strand, 9801707 - 9801952
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||||||||||| || |||| |||| ||  ||| ||||||  ||||    
T  9801707 tttcgatcgttcttccatttgaaaactcctaggaacttgaaataaattttcctcactttgtattttctttaaaaacctttta--agaaccattga-cttc 9801803  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | || | | | ||| |||||  |||||| ||||||||||  |||||||||||| || |||  ||| ||||||||||| |||||| |||||| ||||    
T  9801804 aatcttcatatccttgatccttcacatgatgttttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatct 9801903  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    | ||||||| | ||||||||||||| ||||||||| |||||||||||||    
T  9801904 aggataaaagtgaattacaacgactagagtgaaaaaaatacaatatgtt 9801952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 407
Target Start/End: Complemental strand, 7815624 - 7815360
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    ||||| |||||||||||  |||||||||||| ||||| ||||||||||||  || |||||||||||||||||||||||||||| | ||||| | ||||||    
T  7815624 tcttgcgtttttgtcctattttcgatcgttcttccgtctgaaaactcctatgaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttct 7815525  T
Q  241 agaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacact 340  Q
       |   |  ||| ||||||||   | | | | ||| |||||  ||||||||| ||||||   |||||||||||  || ||||||||||||||||||||     
T  7815524 gtcaa--cttttgatcttcaattctatatccttgatccttcacatgatgtctttatttgttgatttacatgattcatcactacaaaacactcaaaacacc 7815427  T
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    |||| ||||||||||| ||  |||||| | ||||||||| || |||||||||| |||||||||||||    
T  7815426 tatgaagttgcatgatttagaataaaactgaattacaaccacccgagtgaaaaaaatacaatatgtt 7815360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 412
Target Start/End: Complemental strand, 23125150 - 23124932
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtc 291  Q
    ||||||||||||||||||||||||||||||| | || || |  ||| ||  ||| ||||||  ||||||| | || | | | ||| |||||  |||||||    
T  23125150 aatttgaaatgaattttcttcactttgtattgtctttaagaatcttata--agaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtc 23125053  T
Q  292 ttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaa 391  Q
    |||||| |||  |||||||||||| || ||| |||||||||||||||| ||| |||||| ||||| |  ||||||  | |||||||||||||||||||||    
T  23125052 ttgattggtcgatttacatgatttctcactagaaaacactcaaaacacctatagagttgtatgattttggataaatgtgaattacaacgactcgagtgaa 23124953  T
Q  392 aacaatacaatatgttcctca 412  Q
    |||||||||||||||||||||    
T  23124952 aacaatacaatatgttcctca 23124932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 1255162 - 1255298
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||| |||||||||   |||| || |||| ||  ||||||||||||||||||| |||| ||||||||||| || ||||||||| |||||||    
T  1255162 cttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaacacctatgaagttgcatgatttaggataaaaatgaattaca 1255261  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||||||||||||||||||||| | |||||||||    
T  1255262 atgactcgagtgaaaacaatacaatttattcctcaaa 1255298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 414
Target Start/End: Original strand, 20470642 - 20470895
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| || || || |||||| ||  || ||||||| ||||||||||| |||||||| | ||||| | |||||||  ||| ||||||  ||||    
T  20470642 tttcgatcgttcttctgtctggaaactcatacgaacttgaaatcaattttcttcattttgtattgtcttcaagaaccttcta--agaaccattgaacttc 20470739  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||||| |||| | | |||  |||||| ||||||||||||||||  |||||||| ||| || ||| |||||||||||||||  |||| || |||||||| |    
T  20470740 aatattcacatccttgatcgttcatgcgatgtcttgatttgtcgatttacatgctttatcactataaaacactcaaaacagctatgcagatgcatgattt 20470839  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | | | ||| | |||||||||||||  ||||||||||||| |||||||||||||||    
T  20470840 aggctgaaagtgaattacaacgacttaagtgaaaacaatataatatgttcctcaaa 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 278 - 407
Target Start/End: Original strand, 9761364 - 9761493
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| ||||||||||||||||||  |||||||||||| || |||  ||| ||||||||||| |||||| |||||| ||||| ||||||| | |||||||    
T  9761364 cttcacgtgatgtcttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatctaggataaaagtgaattaca 9761463  T
Q  378 acgactcgagtgaaaacaatacaatatgtt 407  Q
    |||||| ||||||||| |||||||||||||    
T  9761464 acgactagagtgaaaaaaatacaatatgtt 9761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 414
Target Start/End: Original strand, 22067656 - 22067891
Alignment:
Q  181 aaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatactt 280  Q
    ||||||||||| || |||||||||||| | ||||||||||||| | ||||| | |||||||  ||| || ||| | ||||||    || | | ||| |||    
T  22067656 aaaactcctaggaacttgaaatgaattcttttcactttgtattgtcttcaacaaccttcta--agaacccttgattttcaattgttcatccttgatcctt 22067753  T
Q  281 catgtgatgtcttgatttgtcagtttacat--gatttgtctctacaaaacactcaaaaca--cttatggagttgcatgatctaagataaaaataaattac 376  Q
    ||  |||||||||||||||    |||||||  ||||  || ||||||||||||||||| |  | ||||||||||||||||||| ||||||| | ||||||    
T  22067754 cacatgatgtcttgatttgatgatttacatatgattcctcactacaaaacactcaaaaaatacctatggagttgcatgatctaggataaaattgaattac 22067853  T
Q  377 aacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    || ||||||||||||||||||||| |||||||||||||    
T  22067854 aatgactcgagtgaaaacaatacattatgttcctcaaa 22067891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 414
Target Start/End: Original strand, 21545797 - 21545884
Alignment:
Q  327 acactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||| |||| || |||| ||||||||||| || ||||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  21545797 acacttaaaaaacctatgtagttgcatgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaa 21545884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 5312761 - 5312857
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    |||||||||||| || ||| |||| ||||||||||| |||||||||||||| | |||||||||| | |||||||||||||| | ||||||||||||||    
T  5312761 tttacatgatttatcacta-aaaagactcaaaacacctatggagttgcatgctataagataaaagtgaattacaacgactcaaatgaaaacaatacaa 5312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 20017282 - 20017154
Alignment:
Q  112 gcgcatctggcagtctctcctgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttct 211  Q
    ||||||||||||| |||||| | | ||| ||||||||||| ||| || ||||||  |||| | |||||| |||||||||| || ||||||||||||||||    
T  20017282 gcgcatctggcagcctctcccg-gcgatttcttgtgttttcgtcatgttttcgactgttctttcgtttgtaaactcctaggaacttgaaatgaattttct 20017184  T
Q  212 tcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||| | ||||| | |||||||    
T  20017183 tcactttgtattgtcttcaagaaccttcta 20017154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 10292913 - 10292794
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||||||||    |||||||||||  || |||||||| | || |||||| ||||| ||||||||||||  ||||||| | ||||||||||||||    
T  10292913 tgatgtcttgatttgatgatttacatgattcctcactacaaaatagtctaaacacctatggtgttgcatgatcttggataaaactgaattacaacgactc 10292814  T
Q  385 gagtgaaaacaatacaatat 404  Q
    || |||||| ||||||||||    
T  10292813 gattgaaaaaaatacaatat 10292794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 414
Target Start/End: Complemental strand, 1074611 - 1074482
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||| |||  || |||||||||||| || ||| |||| || ||||||||||||||||||| || || || |||||||  ||||||||| || ||    
T  1074611 tgatgtcttgcttttccaatttacatgatttctcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaattacaatgaatc 1074512  T
Q  385 gagtgaaaacaatacaatatgttcctcaaa 414  Q
    || |||||| ||||||||  ||||||||||    
T  1074511 gaatgaaaataatacaattggttcctcaaa 1074482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 2632436 - 2632517
Alignment:
Q  329 actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||| |||| |||||||||||||  ||||||| | ||||||||||| |||| |||||| ||||||||||||||||    
T  2632436 actcaaaacacctatgaagttgcatgatcttggataaaactgaattacaacgattcgattgaaaataatacaatatgttcct 2632517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 398
Target Start/End: Complemental strand, 7495002 - 7494752
Alignment:
Q  134 tgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaa 233  Q
    ||||| ||||||||||||| |||  | ||||||||||| ||||| || ||||||||||||  ||||||| |||||||||||||||||||| | ||||       
T  7495002 tgtgaaatcttgtgtttttctcc--cattcgatcgttcttccgtctggaaactcctagaatcttgaaataaattttcttcactttgtattgtcttcatgg 7494905  T
Q  234 gccttctagaagagccattggtcttcaat-atcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactc 332  Q
     ||||||  |||| |||||   |||||||  ||| | | | ||| ||||||||||||||||||||| ||| ||||||||||||  | |||||||||        
T  7494904 accttct--aagaaccatt-aacttcaatcttcatatccttgatccttcatgtgatgtcttgatttttcaatttacatgatttcccactacaaaac---- 7494812  T
Q  333 aaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaata 398  Q
          | |||||| ||||| |||||| ||||||| | ||||||||||||| ||||||||| ||||    
T  7494811 ------cctatggaattgcaagatctaggataaaagtgaattacaacgacttgagtgaaaagaata 7494752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 7493614 - 7493532
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtatt 223  Q
    ||||||||||| ||| || |||  ||||||| ||| |||||||||||||||||||||| |||||||||| |||| ||||||||    
T  7493614 tcttgtgttttcgtcttgttttttatcgttcttccctttgaaaactcctagaaatttggaatgaatttttttcattttgtatt 7493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 3268915 - 3269050
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| ||||| |||| |  |||||||||||| || ||| |||| ||| ||||||| || | ||||||||||| || ||||||| | |||||||    
T  3268915 cttcatgtgatatcttgttttgccgatttacatgatttctcacta-aaaagacttaaaacacatacgaagttgcatgatttaggataaaagtgaattaca 3269013  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    || |||| |  ||||||||||||| ||||| ||||||    
T  3269014 acaactcaaacgaaaacaatacaaaatgttactcaaa 3269050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 8308981 - 8309115
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| ||||||||||| ||||    |||||||||||| |  ||| |||| ||||||||||  |||||||||||||||| || ||||||| ||||| |||    
T  8308981 cttcacgtgatgtcttgttttgctgatttacatgatttcttacta-aaaagactcaaaacatgtatggagttgcatgatttaggataaaactaaatcaca 8309079  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||| | ||||||||||||||  |||||||||||    
T  8309080 atgactcaaatgaaaacaatacaa-ctgttcctcaaa 8309115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 7372540 - 7372651
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaa-gataaaaataaattacaacgactcgagtgaaaacaatacaat 402  Q
    |||||| ||||| || ||| |||||||| ||||||| |||| ||||||||||| |   ||||||| | |||||||||||||||| ||||||||||||||     
T  7372540 tttacaagatttctcactaaaaaacactgaaaacacctatgaagttgcatgatttcgtgataaaattgaattacaacgactcgaatgaaaacaatacaaa 7372639  T
Q  403 atgttcctcaaa 414  Q
    | |||| |||||    
T  7372640 aagttcatcaaa 7372651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 417
Target Start/End: Complemental strand, 9066227 - 9066159
Alignment:
Q  347 gttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaaca 417  Q
    ||||||||||||  ||||||| | ||||||  |||||||||||||||||||||||||||||||| ||||||    
T  9066227 gttgcatgatcttggataaaagtgaattac--cgactcgagtgaaaacaatacaatatgttcctaaaaaca 9066159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 315297 - 315215
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||| ||||||||||||||||||| ||||||| | ||| ||||  |||||||||| || |||||||||| ||| |||||    
T  315297 caaaacacctatggagttgcatgatctaggataaaactgaataacaataactcgagtgacaataatacaatatattcttcaaa 315215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 21545629 - 21545731
Alignment:
Q  130 cctgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattc 229  Q
    ||||||||| |||||| |||||  ||||| ||||| |  ||| | ||| || ||||||||||||| ||||||||||||||||||||||| |||| | |||    
T  21545629 cctgtgtgaaatcttgcgttttcatcctgttttcggttattctttcgtctggaaactcctagaaacttgaaatgaattttcttcactttttattgtcttc 21545728  T
Q  230 aaa 232  Q
    |||    
T  21545729 aaa 21545731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 9755883 - 9755830
Alignment:
Q  361 gataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||    
T  9755883 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaa 9755830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 9800679 - 9800626
Alignment:
Q  361 gataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||    
T  9800679 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaa 9800626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 37145032 - 37144963
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    |||||||| || ||||||||||||| || |||||||||| |||||||||||| || |||||| |||||||    
T  37145032 caaaacacctacggagttgcatgatttaggataaaaatatattacaacgacttgaatgaaaataatacaa 37144963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 401
Target Start/End: Original strand, 4977769 - 4977892
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||||||||||||||||||||   |||||||||||| || ||| ||| | |||| |||   |||| |||||||| || || ||||||| | |||||||    
T  4977769 cttcatgtgatgtcttgatttgtatatttacatgatttctcactataaaccgctcacaacctctatgaagttgcataatttaggataaaagtgaattaca 4977868  T
Q  378 acgactcgagtgaaaacaatacaa 401  Q
    |||||| || ||| || |||||||    
T  4977869 acgacttgaatgataaaaatacaa 4977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 7361607 - 7361705
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatcta-agataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    ||||||| |||| || |||||||||||||||||||  || ||||||||||||| ||  ||||||| | | |||||| ||||||| |||||||| |||||    
T  7361607 tttacataatttttcactacaaaacactcaaaacatctacggagttgcatgatttagtgataaaagtgagttacaatgactcgaatgaaaacattacaa 7361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 12358756 - 12358846
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||| |||| ||||| ||||| || ||||||||| |||||||||||||| | ||| || ||||||| || || ||||||    
T  12358756 aaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaacgactcaaatgagaaaaatacaaaatatttctcaaa 12358846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 4828894 - 4828821
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| || ||||||| |||||||||| || |||| | |||| ||||||| | ||||||||||    
T  4828894 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaa 4828821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 7956284 - 7956224
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    ||||||||| | |||| ||||||||||   |||||||||||||||| ||||||||||||||    
T  7956284 tatggagtttcttgatttaagataaaagcgaattacaacgactcgaatgaaaacaatacaa 7956224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 24596959 - 24597058
Alignment:
Q  284 gtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgact 383  Q
    ||||||||||| |||| |  |||||| ||||| || ||| |||| ||| ||||||| || ||||||||||||| || ||||||| | |||||||||||||    
T  24596959 gtgatgtcttgttttgccgatttacacgatttctcacta-aaaagacttaaaacacctacggagttgcatgatttaggataaaattgaattacaacgact 24597057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 46054804 - 46054728
Alignment:
Q  338 acttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||||||||||| ||  |||||| ||||||||||||||| || | ||||||||| ||  |||||||||||    
T  46054804 acttatgaagttgcatgatttattataaaagtaaattacaacgacttgaattaaaacaatataaattgttcctcaaa 46054728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 315450 - 315392
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtatt 223  Q
    ||||||| | ||| || |||||||||| || |||||||||||||| |||||||||||||    
T  315450 atcgttctttcgtctggaaactcctaggaacttgaaatgaattttattcactttgtatt 315392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 410
Target Start/End: Original strand, 17881493 - 17881579
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||| |||||||| || |||  ||||||||||| || ||||||| |||||||||| || |||| |||||| ||||||| | ||||||    
T  17881493 aaaagactcaaaatacctattaagttgcatgatttatgataaaattaaattacaatgattcgaatgaaaataatacaaaaagttcct 17881579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 20461623 - 20461732
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||| || ||| |||| |||| |||||| |||   ||||| |||| || ||| ||| | | |||||||||||||| ||||||||||||||      
T  20461623 tttacatgatttctcacta-aaaagactcgaaacacctatcatgttgcgtgatttaggatgaaattgagttacaacgactcgaatgaaaacaatacaaat 20461721  T
Q  404 tgttcctcaaa 414  Q
    |||||||||||    
T  20461722 tgttcctcaaa 20461732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 165 - 410
Target Start/End: Original strand, 11769831 - 11770075
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat 264  Q
    ||||||| ||||| || |||||| ||| || |||||||||||||||||||||||||||| | ||||||| |||||||  ||| ||||||||||||||| |    
T  11769831 atcgttcttccgtctggaaactcataggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttcta--agaaccattggtcttcaatct 11769928  T
Q  265 -cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagat 363  Q
     || | ||| |||  |||||||||||||||||||| ||  |||||||||||| || || |||||||||||| ||||  ||| |||| |||||| || |||    
T  11769929 tcatatctttgatcattcatgtgatgtcttgatttttcgatttacatgatttctcactgcaaaacactcaacacacccatgaagtttcatgatttaggat 11770028  T
Q  364 aaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||| | |||||||||||| |||||||||||||||||||||||||||    
T  11770029 aaaagtgaattacaacgacacgagtgaaaacaatacaatatgttcct 11770075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 181 - 414
Target Start/End: Complemental strand, 30675745 - 30675514
Alignment:
Q  181 aaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatact 279  Q
    ||||||||||| || |||||||||||||||||||||||||||| | ||||||| |||||||  ||| |||||| | |||||| | ||||   | ||| ||    
T  30675745 aaaactcctaggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttcta--agaaccattgat-ttcaatcttcacattcttgatcct 30675649  T
Q  280 tcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaac 379  Q
    |||  ||||||||| | ||| |  |||||||||||| || ||| |||||||||||||||| |||||||||||||||| || || |||| |  ||||||||    
T  30675648 tcacatgatgtcttaaattgccgatttacatgatttctcactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtattacaac 30675549  T
Q  380 gactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||||||||||||||||||    
T  30675548 gactcgagtgaaaacaatacaatatgttcctcaaa 30675514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 147 - 414
Target Start/End: Complemental strand, 26657771 - 26657506
Alignment:
Q  147 gtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaaga 246  Q
    |||||| ||| | |||||||| ||| | ||| ||||||||||||| || ||||||||||||||||||||||||| || | ||||||| |||| ||  |||    
T  26657771 gtttttctcccgttttcgatcattctttcgtctgaaaactcctaggaacttgaaatgaattttcttcactttgttttgtcttcaaaaaccttata--aga 26657674  T
Q  247 gccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatgg 345  Q
     | ||||  |||| || | || | | | ||| |||||  | |||||||||||||||  |||||||||||| || |||||||||||||||||||| |||||    
T  26657673 actattga-cttcgattttcatagccttgatccttcacctaatgtcttgatttgtcgatttacatgatttttcactacaaaacactcaaaacacctatgg 26657575  T
Q  346 agttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||| ||||||| ||||||| | ||||||||||| |||||||||||||||||| ||| |||||||||    
T  26657574 agttgcgtgatctaggataaaagtgaattacaacgaatcgagtgaaaacaatacattatattcctcaaa 26657506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 414
Target Start/End: Original strand, 25494349 - 25494564
Alignment:
Q  188 ctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaat-atcacaccttggatacttcatgtg 286  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| ||||||  |||| |||||||||||||||  ||| | ||| | | ||| |||||    
T  25494349 ctagaaatttgaaatgaattttcttcactttgtattgtcttcaaaaaccttct--aagaaccattggtcttcaatcttcatatctt-gctccttaatgtg 25494445  T
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcga 386  Q
    |||||||||||||||  |||||||||||| || |||         |||||||| |||| ||||||||||| || ||||||| |||||||||| ||||| |    
T  25494446 atgtcttgatttgtcgatttacatgatttctcacta---------caaaacacctatgtagttgcatgatttaggataaaagtaaattacaaggactcaa 25494536  T
Q  387 gtgaaaacaatacaatatgttcctcaaa 414  Q
    | |||||||| |||||||||||||||||    
T  25494537 gagaaaacaagacaatatgttcctcaaa 25494564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 8247607 - 8247742
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaa 378  Q
    |||| |||||||||||||||||   |||||||||||  || |||||||||||||||||||| ||||||||||||||||||| | |||||  |||||||||    
T  8247607 ttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaacactcaaaacacctatggagttgcatgatctagggtaaaacaaaattacaa 8247706  T
Q  379 cgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     ||||| |||||||| |||| |||||||||||||||    
T  8247707 tgactcaagtgaaaataataaaatatgttcctcaaa 8247742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 414
Target Start/End: Complemental strand, 50047457 - 50047211
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||| ||||||| || ||| |||||||||||| || || |||||||||||||||| |||||||| | ||||| | |||| ||  ||  |||||| |||||    
T  50047457 tttctatcgttcttctgttcgaaaactcctaggaacttaaaatgaattttcttcattttgtattgtcttcaataacctttta--agtaccattgatcttc 50047360  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||||| || ||| | ||| ||||| ||||| ||||       || |||||||||||| || |||||||||||||||||||  |||||||||| ||||| |    
T  50047359 aatattcatacccttgatccttcacgtgatttctt-------cactttacatgatttctcgctacaaaacactcaaaacatatatggagttgtatgattt 50047267  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||||| | |||||| | |||||||||||||||||||||||||||| ||||||    
T  50047266 aggataaaagtgaattaccatgactcgagtgaaaacaatacaatatgtttctcaaa 50047211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 278 - 403
Target Start/End: Original strand, 25727858 - 25727983
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| | ||||||||||  |||||||||||| || |||||||||||||||||||| ||| |||||||||||| || ||||||| | |||||||    
T  25727858 cttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaattaca 25727957  T
Q  378 acgactcgagtgaaaacaatacaata 403  Q
    |||| | |||||||||||||||||||    
T  25727958 acgattagagtgaaaacaatacaata 25727983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 278 - 403
Target Start/End: Original strand, 25736266 - 25736391
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| | ||||||||||  |||||||||||| || |||||||||||||||||||| ||| |||||||||||| || ||||||| | |||||||    
T  25736266 cttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaattaca 25736365  T
Q  378 acgactcgagtgaaaacaatacaata 403  Q
    |||| | |||||||||||||||||||    
T  25736366 acgattagagtgaaaacaatacaata 25736391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 414
Target Start/End: Original strand, 18300857 - 18301088
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatactt 280  Q
    |||||||||| |||||||||| | ||||||||||| |||||| | ||||||| |||||||  ||| |||||||| || ||| | || | | | ||| |||    
T  18300857 aaactcctaggaatttgaaataatttttcttcactctgtattgtcttcaaaaaccttcta--agaaccattggtatttaatcttcatatccttgatcctt 18300954  T
Q  281 catgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacg 380  Q
    || ||||||||||||||||||  |||||||||||  || ||  |||||||||||||||| |||| ||||||||||| |  ||||||| | ||||||||||    
T  18300955 cacgtgatgtcttgatttgtctatttacatgattcatcactttaaaacactcaaaacacctatgaagttgcatgattttcgataaaagtcaattacaacg 18301054  T
Q  381 actcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||  |  ||||||| |||||||| |||||||||    
T  18301055 actttaaagaaaacagtacaatatattcctcaaa 18301088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 165 - 414
Target Start/End: Original strand, 23519606 - 23519840
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat 264  Q
    ||||||| ||||| ||||||||||||| || ||||||| ||||||||||||||| |||| | ||||| | ||||||  |||| ||||||||||||||| |    
T  23519606 atcgttcttccgtctgaaaactcctaggaacttgaaataaattttcttcactttctattgtcttcaacaaccttct--aagaaccattggtcttcaattt 23519703  T
Q  265 cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagata 364  Q
    || |   | ||| ||||| || |||||||||| ||||  |||||||||||| || |||||||||||          ||| ||||||||||||||| ||||    
T  23519704 catattcttgatccttcacgtaatgtcttgatgtgtcgatttacatgatttctcactacaaaacac----------tatagagttgcatgatctaggata 23519793  T
Q  365 aaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||| | |||||||| |||| |||||||   ||||||||||||||||||||    
T  23519794 aaagtgaattacaatgacttgagtgaa---aatacaatatgttcctcaaa 23519840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 120 - 404
Target Start/End: Complemental strand, 30782082 - 30781800
Alignment:
Q  120 ggcagtctctcctgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttg 219  Q
    ||||| |||||  ||| ||| ||||| |||||  ||||| |||||||||||| |  |  ||||||| ||||| || ||||||| ||||||||||||||||    
T  30782082 ggcagcctctcaggtgcgatttcttgcgttttcttcctgttttcgatcgttcttttgcctgaaaacacctaggaacttgaaatcaattttcttcactttg 30781983  T
Q  220 tattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtct 319  Q
    |||| | ||||| | |||| ||  ||| || ||| ||||||||    || | | ||| |||||  |||||||||||||||    |||||||||||  ||     
T  30781982 tattgtcttcaacaacctttta--agaacccttgatcttcaattcttcatccttgatccttcacatgatgtcttgatttgatgatttacatgattcctca 30781885  T
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatat 404  Q
    |||||||||||||||||||| |||||||||| |||||||  ||||||| | |||||||| | ||||| |||||||||||||||||    
T  30781884 ctacaaaacactcaaaacacctatggagttgtatgatcttggataaaactgaattacaatgtctcgattgaaaacaatacaatat 30781800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 320 - 407
Target Start/End: Original strand, 25266336 - 25266423
Alignment:
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  25266336 ctacaaaacactcaaaacacatatgaagttccatgatccaagataaaaatgaattacaatgactcgagtgaaaacaatacaatatgtt 25266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 414
Target Start/End: Complemental strand, 23223674 - 23223441
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattc-aaaagccttctagaagagccattggtcttcaat-atcaca-ccttggatac 278  Q
    |||||||||| || |||||||||||||| ||||||||||||| | ||| |||| ||||||  | ||   |||||| ||||||  ||| | ||||| || |    
T  23223674 aaactcctaggaacttgaaatgaatttttttcactttgtattgtcttcaaaaaaccttct--atgaattattggttttcaatcttcatatccttgaat-c 23223578  T
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaa 378  Q
    |||||| |||||||||| ||||   |||||||||||| || |||||||||| | ||||||| | |||||||||||||| || ||||||| ||||||||||    
T  23223577 ttcatgcgatgtcttgacttgttgatttacatgatttctcactacaaaacattaaaaacacctttggagttgcatgatttaggataaaagtaaattacaa 23223478  T
Q  379 cgactcgagtg-aaaacaatacaatatgttcctcaaa 414  Q
    ||| ||||||| |||| |||||||| |||||||||||    
T  23223477 cgaatcgagtgaaaaaaaatacaatgtgttcctcaaa 23223441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 12423915 - 12423999
Alignment:
Q  330 ctcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||  ||||||||||||||    
T  12423915 ctcaaaacacatatggagttgcatgatctaagataaaactgaattacaatgactcgagtgaaaacaatatcatatgttcctcaaa 12423999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 278 - 413
Target Start/End: Original strand, 25730520 - 25730655
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| ||||||||||||  |||||||||||| || |||||||||||||||||||| | || ||||||||||| || ||||||| | |||| ||    
T  25730520 cttcatgtgatatcttgatttgtcgatttacatgatttctcgctacaaaacactcaaaacacctgtgaagttgcatgatttaggataaaattgaatttca 25730619  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    | || | || |||||||||||||||| | |||||||    
T  25730620 atgatttgaatgaaaacaatacaatacgctcctcaa 25730655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 12810418 - 12810352
Alignment:
Q  348 ttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  12810418 ttgcatgatctaggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaa 12810352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 26102221 - 26102087
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaa 378  Q
    |||| ||||||||||| ||||||  ||| || ||| | || ||| |||| |||||||||||  ||||||||||||||| || ||||||| | ||||||||    
T  26102221 ttcacgtgatgtcttgttttgtcgatttgcacgatatctcacta-aaaagactcaaaacacccatggagttgcatgatttaggataaaagtgaattacaa 26102123  T
Q  379 cgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | |||||| |||||||||||||| ||| ||||||||    
T  26102122 caactcgaatgaaaacaatacaaaatggtcctcaaa 26102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 34381875 - 34381738
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctcta--caaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattac 376  Q
    |||| ||||||| ||||||||||  ||||||| |||| || |||  ||||| ||||||||||| |||| |||||| |||| ||  ||| || | ||||||    
T  34381875 ttcacgtgatgttttgatttgtcgatttacattatttttcactatacaaaatactcaaaacacctatgaagttgcgtgatttagaatagaagtgaattac 34381776  T
Q  377 aacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||| ||||||||||| ||||||||| |||||    
T  34381775 aacgactcgaatgaaaacaatataatatgttcttcaaa 34381738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 12423747 - 12423828
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||| ||||||| | ||||||||||||||||| || ||||||||||||| |||||||||||||| | ||||| | |||||||    
T  12423747 tttcaatcgttctttcgtttgaaaactcctaggaacttgaaatgaatttccttcactttgtattgtcttcaacaaccttcta 12423828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 417
Target Start/End: Original strand, 26854191 - 26854405
Alignment:
Q  199 aaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatt 297  Q
    ||||||||||||||||||||||||| | ||||||   ||||||  ||| ||||||  ||||||| | || | | | ||| |||||  | |||||||| ||    
T  26854191 aaatgaattttcttcactttgtattgtcttcaaatatcttcta--agaaccattgaacttcaatcttcatatcattgatccttcacttaatgtcttgttt 26854288  T
Q  298 tgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaat 397  Q
    || | |||||||||||||  ||||| |||| ||||||||||  |||| ||||| ||||  || ||||||| | ||||||||||||| || |||||| |||    
T  26854289 tgccggtttacatgattt--ctcta-aaaagactcaaaacatctatgaagttgtatgaattaggataaaattgaattacaacgacttgaatgaaaagaat 26854385  T
Q  398 acaatatgttcctcaaaaca 417  Q
    |||| | |||||||||||||    
T  26854386 acaaaaagttcctcaaaaca 26854405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 410
Target Start/End: Complemental strand, 31313717 - 31313586
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| ||||||| ||| |||  || |||||||||||| |  ||| |||| ||||||||||| |||| ||||||||||| || ||||||| | |||||||    
T  31313717 cttcacgtgatgtattgtttttccaatttacatgatttcttactaaaaaa-actcaaaacacctatgaagttgcatgatttaggataaaagtgaattaca 31313619  T
Q  378 acgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||||| ||  ||||||||||||| | ||||||    
T  31313618 acgacttgaacgaaaacaatacaaaacgttcct 31313586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 19257754 - 19257888
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaa 378  Q
    |||||||||||||||| | || || |||||| ||||| || ||| |||| ||||||||||| || ||| ||||||||| || |||||||   ||||||||    
T  19257754 ttcatgtgatgtcttgttatgccaatttacacgatttctcacta-aaaatactcaaaacacctaaggacttgcatgatttaggataaaatcgaattacaa 19257852  T
Q  379 cgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     |||| || |||||||||||||  | ||||||||||    
T  19257853 tgactagaatgaaaacaatacagaaagttcctcaaa 19257888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 21548763 - 21548694
Alignment:
Q  329 actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaata 398  Q
    |||| ||||||||||||||||||||  | || ||||||| | |||||||||||||||| |||||||||||    
T  21548763 actccaaacacttatggagttgcattttttaggataaaactgaattacaacgactcgaatgaaaacaata 21548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 15416923 - 15417058
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||| ||||||| |||| |   |||||||||||| || || |||| ||||||||||| |||  ||||||||||| |||||||||| | ||||| |    
T  15416923 cttcatgtggtgtcttgctttgccgaattacatgatttgactata-aaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaattaaa 15417021  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | || | || ||||||||||| || ||||| ||||||    
T  15417022 atgaattgaatgaaaacaataaaaaatgtttctcaaa 15417058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 18391247 - 18391112
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||  || |  | |||||||||||| |  ||| |||| |||| |||| | |||||| |||||||||||| ||||||| | |||||||    
T  18391247 cttcatgtgatgtcttatttcgctaatttacatgatttcttccta-aaaatactctaaacgcctatggaattgcatgatctaggataaaagttaattaca 18391149  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| | |||||| |||| || ||||| ||||||    
T  18391148 acgactcaaatgaaaataatataaaatgttactcaaa 18391112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 21451818 - 21451897
Alignment:
Q  331 tcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||| ||||||||||||  ||||| |||||||   ||||| || || ||||||||||| ||||||||||||||||    
T  21451818 tcaaaacacctatggagttgcactatctaggataaaacagaattataatgagtcgagtgaaaataatacaatatgttcct 21451897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 9353293 - 9353213
Alignment:
Q  161 ttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    ||||||||||| ||| | || |||||| ||| || ||| | |||||||||||||||| ||||||| ||||||| |||||||    
T  9353293 ttcgatcgttcttccatatggaaactcataggaacttggactgaattttcttcacttagtattttcttcaaaaaccttcta 9353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 27461186 - 27461266
Alignment:
Q  334 aaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||| |||| |||||||| || || ||||||| | ||||| ||| ||| || |||||||||||||| ||||||||||||    
T  27461186 aaacacctatgaagttgcataatttaggataaaagtgaattataacaacttgaatgaaaacaatacaaaatgttcctcaaa 27461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 52271110 - 52271158
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    ||||||||||||||||||||||||||||||| | ||||||  |||||||    
T  52271110 aatttgaaatgaattttcttcactttgtattgtcttcaaataccttcta 52271158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 25373859 - 25373816
Alignment:
Q  371 aattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||| | ||||||||||||||| |||||||||||    
T  25373859 aattacaacgactcaaatgaaaacaatacaatttgttcctcaaa 25373816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 414
Target Start/End: Complemental strand, 18795344 - 18795211
Alignment:
Q  280 tcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaac 379  Q
    ||||||||||||||| ||||    |||||| ||||| || ||| |||  ||||||||||| |||| || || ||||  || ||||||| ||||||||||     
T  18795344 tcatgtgatgtcttgttttgctgatttacacgatttctcacta-aaatgactcaaaacacctatgaagctgtatgacttaggataaaagtaaattacaat 18795246  T
Q  380 gactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     |||| | ||||||| |||||| ||||||||||||    
T  18795245 tactcaaatgaaaacgatacaaaatgttcctcaaa 18795211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 19884275 - 19884202
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| || |||||||   ||||||| ||| |||| ||||||||||| || | ||||||||||    
T  19884275 tatggagttgcatgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaa 19884202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 9328444 - 9328368
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    ||||||| ||| | || |||||||||| || ||| | |||||||||||||||| ||||| | ||||||| |||||||    
T  9328444 atcgttcttccatatggaaactcctaggaacttggactgaattttcttcacttagtattgtcttcaaaaaccttcta 9328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 23506002 - 23505966
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    |||||||||||||||||||||||||||| | ||||||    
T  23506002 ttgaaatgaattttcttcactttgtattgtcttcaaa 23505966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 23521678 - 23521730
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacac 330  Q
    ||||| ||||||||||||| ||||  |||||||||||| || |||||||||||    
T  23521678 cttcacgtgatgtcttgatgtgtcgatttacatgatttctcactacaaaacac 23521730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 25126726 - 25126690
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  25126726 ttgaaatgaattttcttcattttgtattgtattcaaa 25126690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 410
Target Start/End: Original strand, 26329874 - 26330149
Alignment:
Q  132 tgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaa 231  Q
    ||||||| ||||||  ||||| ||| ||||| |||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||| | || ||    
T  26329874 tgtgtgaaatcttgcctttttctcccgcttttgatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttaaa 26329973  T
Q  232 aagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacac 330  Q
    || |||||||  ||  ||||||  ||||||| | || | | | ||| ||||||||||||||||||||| ||| ||||||||||||  | |||||||||||    
T  26329974 aaaccttcta--aggaccattga-cttcaatcttcatatccttgatccttcatgtgatgtcttgatttttcaatttacatgattt--cactacaaaacac 26330068  T
Q  331 tcaaaacacttatggagttgcatgatctaagataaaaataaattacaac-gactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||| |||| |||||||||||||| |||||||   ||||||||| | ||| ||||||||||||||||||| |||||    
T  26330069 tcaaaacacctatgaagttgcatgatctaggataaaagggaattacaactggctcaagtgaaaacaatacaatatattcct 26330149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 160 - 403
Target Start/End: Complemental strand, 22230086 - 22229845
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| ||||| ||||||||||||| || |||| |||  |||||||||||| ||||| | ||||| | |||||||  ||| || ||| |||||    
T  22230086 tttcgatcgttcttccgtctgaaaactcctaggaacttgagatgtgttttcttcacttggtattatcttcaacaaccttcta--agaacccttgatcttc 22229989  T
Q  260 aatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatcta 359  Q
    |||  || | ||| ||| ||||| |||||||||||||||||   |||||||||||  || |||||||| || |||||||||| |||||||||||| ||||    
T  22229988 aattccatatctttgatccttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaatacccaaaacacttgtggagttgcatggtcta 22229889  T
Q  360 agataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
     ||||||| | |||||||||||||| ||||||||||||||||||    
T  22229888 ggataaaactgaattacaacgactcaagtgaaaacaatacaata 22229845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 414
Target Start/End: Complemental strand, 24842013 - 24841783
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatactt 280  Q
    |||||||||| ||  |||||||||||||||||| ||||| || | ||||||| |||||||  ||| ||||||  |||||||   || | | | ||| |||    
T  24842013 aaactcctaggaacatgaaatgaattttcttcattttgtgttgtcttcaaaatccttcta--agaaccattga-cttcaatccacatatccttgatcctt 24841917  T
Q  281 catgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacg 380  Q
    || ||| ||||||||||| ||| |||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||| ||||||| | | ||||||||    
T  24841916 cacgtgttgtcttgatttttcaatttacatgatttctcactacaaaacactaaaaacacctatggagttccatgatctaggataaaagtgacttacaacg 24841817  T
Q  381 actcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||||||||||||||||||||    
T  24841816 actcgagtgaaaacaatacaatatgttcctcaaa 24841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 160 - 407
Target Start/End: Original strand, 11274162 - 11274408
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||| ||||||| ||||  ||||||||||||| || |||||||||| |||| |||  ||||||| | ||||||  |||||||  ||| ||||||||||||    
T  11274162 tttcaatcgttcttccgcatgaaaactcctaggaacttgaaatgaaatttcatcatcttgtattgtcttcaaagaccttcta--agaaccattggtcttc 11274259  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | || | | | ||| ||||||||||||||||||||||||  | |||||||||| |  |||||||||||||||||||| |||||||||||||||| |    
T  11274260 aatcttcatatccttgatccttcatgtgatgtcttgatttgtcgatatacatgatttcttactacaaaacactcaaaacacctatggagttgcatgattt 11274359  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    | |||||||  || || ||||| ||| ||||||||||||||||||||||    
T  11274360 aggataaaagcaagttgcaacggctcaagtgaaaacaatacaatatgtt 11274408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 414
Target Start/End: Complemental strand, 16634324 - 16634076
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat 264  Q
    ||||||| ||||  ||||||||  | |||| |||||||||||||| ||||  ||||||||| ||||||| |||||||  ||| ||||||||||||||  |    
T  16634324 atcgttcttccgcctgaaaactattggaaacttgaaatgaatttttttcatcttgtattttcttcaaaaaccttcta--agaaccattggtcttcaaact 16634227  T
Q  265 -cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagat 363  Q
     || |   | | | ||||| ||||||||||||||||||  |||| ||||||| || || ||||||| ||||||||| ||| |||||||||||| ||  ||    
T  16634226 tcatattattgttccttcacgtgatgtcttgatttgtcgatttatatgatttctcactgcaaaacattcaaaacacctatagagttgcatgatttagaat 16634127  T
Q  364 aaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  16634126 aaaagtgaattacaacgactcgagtgaaaacaatacaatatgtttctcaaa 16634076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 414
Target Start/End: Original strand, 25594533 - 25594777
Alignment:
Q  168 gttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-ca 266  Q
    |||| ||||| || |||||||||| || ||||| |||||||||||||||||| ||| | | ||||| |||||||  | | |||||| | |||||| | ||    
T  25594533 gttcttccgtctggaaactcctaggaacttgaa-tgaattttcttcactttgcattatctacaaaaaccttcta--atatccattgatattcaatcttca 25594629  T
Q  267 caccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaa 366  Q
     | | | |||  ||||||||||||||| |||| ||  |||||||||||| || ||| |||||||||||||||| |||| |||||||| || || ||||||    
T  25594630 tatccttgatcgttcatgtgatgtcttaatttttcgatttacatgatttctcactataaaacactcaaaacacatatgaagttgcatcatttaggataaa 25594729  T
Q  367 aataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||| || |||||| |||| |||||||||||||||||||||||||||||    
T  25594730 aatgaaatacaacaactccagtgaaaacaatacaatatgttcctcaaa 25594777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 160 - 414
Target Start/End: Complemental strand, 17027809 - 17027557
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| | ||| || |||||||||| || ||||||| |||||||||||||||||||| | ||||| | |||||||  |||  ||||   ||||    
T  17027809 tttcgatcgttctttcgtatggaaactcctaggaaattgaaattaattttcttcactttgtattgtcttcaagaaccttcta--agaagcattaa-cttc 17027713  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | || | ||| |||  | || ||||||||||||||| ||  |||||||||||| ||    ||||||| ||||||||| ||||||||||| |||| |    
T  17027712 aatcttcatatctttgatcttgcacgtgatgtcttgatttttcgatttacatgatttctcatggcaaaacagtcaaaacacctatggagttgcgtgattt 17027613  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||||| | |||||||||||||| |||||||||||| ||||||||||||||||    
T  17027612 aggataaaagtgaattacaacgactcaagtgaaaacaattcaatatgttcctcaaa 17027557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 15205764 - 15205673
Alignment:
Q  323 caaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||| |||||| |||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  15205764 caaaacactcaaaacacctatggaattgcatgatctaggagaaaactgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 15205673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 26070639 - 26070504
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||| |||| || |||||||||||| || ||| |||| |||||||||||||||||||||||||||| || ||||||| | |||||||    
T  26070639 cttcatgtgatgtcttgttttgccaatttacatgatttctcacta-aaaagactcaaaacacttatggagttgcatgatttatgataaaactgaattaca 26070541  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
       |||||| |||||||||||| | || |||||||||    
T  26070540 ttaactcgaatgaaaacaatactaaattttcctcaaa 26070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 414
Target Start/End: Original strand, 16622460 - 16622752
Alignment:
Q  112 gcgcatctggcagtctctcctgtgtgatatcttgtgtttttgtcctgctttcg-atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttc 210  Q
    |||||||||| ||  |||| |||||||| ||||| ||||| |||||  |||   ||||||| ||| | || |||||||||  || |||||||||||||||    
T  16622460 gcgcatctggaagcatctcatgtgtgatttcttgcgttttcgtcctatttttttatcgttcttccatctggaaactcctacgaacttgaaatgaattttc 16622559  T
Q  211 ttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttaca 309  Q
    |||| |||||||| | ||||||| |||||||  ||| ||| ||||||||||| | || | | |  || ||||||||||||||||||||||||| ||||||    
T  16622560 ttcaatttgtattgtcttcaaaa-ccttcta--agaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtcttgatttgtcaatttaca 16622656  T
Q  310 tgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcc 409  Q
    |||||| || || ||||||||          |||| |||||||||||||| ||||||| |  |||||||| | | ||||||| ||||||||| |||||||    
T  16622657 tgatttctcactgcaaaacacc---------tatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaatacaatacaacatgttcc 16622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 18222613 - 18222523
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| |||||| ||||||||| || ||||||| | |||||||| ||||||||| |||||||||||||||||| ||||||    
T  18222613 aaaacactcaaaacacctatggatttgcatgatttaggataaaagtgaattacaatgactcgagttaaaacaatacaatatgtttctcaaa 18222523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 414
Target Start/End: Complemental strand, 25680888 - 25680626
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    ||||| ||||| |||| | ||||||| |||  ||||| || |||||||||||||  |||||||||||||||| |||||||||| | ||| ||| ||||||    
T  25680888 tcttgcgttttcgtcccgttttcgattgtttttccgtctggaaactcctagaaacctgaaatgaattttctttactttgtattgttttctaaaaccttct 25680789  T
Q  241 agaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacact 340  Q
      |||| | ||||| ||| ||| ||  | | | ||| |||||  |||| ||||| ||||||  ||||||||| || |  |||         ||||||||     
T  25680788 --aagaactattggccttaaatttcttatccttgatccttcacatgatttcttggtttgtcgatttacatgaattcttacta---------caaaacacc 25680700  T
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||| ||  |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  25680699 tatgaagttgcatgatttagaataaaattgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 25680626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 12339963 - 12340099
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| |||||||||||||||||   |||| ||||||  |  ||||||||||| ||||| || |||| ||||||||||||||  |||||| | |||||||    
T  12339963 cttcacgtgatgtcttgatttgttgatttatatgattccttactacaaaacacgcaaaatacatatgaagttgcatgatctagtataaaactgaattaca 12340062  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||| | |||||||| |||| |||||||||||||||    
T  12340063 atgacacaagtgaaaataatataatatgttcctcaaa 12340099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 24268655 - 24268585
Alignment:
Q  344 ggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| ||||||| | ||||| || |||||||||||||||||||||| ||||||||||||    
T  24268655 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaa 24268585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 414
Target Start/End: Complemental strand, 24345284 - 24345214
Alignment:
Q  344 ggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| ||||||| | ||||| || |||||||||||||||||||||| ||||||||||||    
T  24345284 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaa 24345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 24517466 - 24517384
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||| ||||||||| ||||||  | ||||||  | ||||||||||||||| ||||||||||||||||||||||||||||    
T  24517466 caaaacacctatggagttacatgattaaggataaatgtgaattacaacgactcgggtgaaaacaatacaatatgttcctcaaa 24517384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 29150900 - 29150985
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcc 409  Q
    |||| |||||||||||||||| | ||||||||| |||||||||||| |||||||| || || |||||||| ||||||| |||||||    
T  29150900 aaaaaactcaaaacacttatgaaattgcatgatttaagataaaaatgaattacaatgattcaagtgaaaataatacaagatgttcc 29150985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 414
Target Start/End: Original strand, 17382002 - 17382120
Alignment:
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcga 386  Q
    ||||||||||||| |  |||||||||||| || |||||||||||||| ||         ||||||||||| || ||||||| | || |||||||| | ||    
T  17382002 atgtcttgatttgacgatttacatgatttctcactacaaaacactcataa---------agttgcatgatttaggataaaagtgaaatacaacgatttga 17382092  T
Q  387 gtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||||||||||||||    
T  17382093 gtgaaaacaatacaatatgttcctcaaa 17382120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 16603590 - 16603682
Alignment:
Q  306 tacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaata 398  Q
    |||||||||| || ||| |||||||||||||||| |||| | ||||||||| || | ||||| | |||||||||||||||| | |||||||||    
T  16603590 tacatgatttctcactagaaaacactcaaaacacctatgaaattgcatgatttaggctaaaatttaattacaacgactcgaatcaaaacaata 16603682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 20694805 - 20694670
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||| |||||||||| |||| |  |||||||||||| |  ||| |||| ||||||||||| |||| ||||| || || |  ||||||| | |||||||    
T  20694805 cttcatatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 20694707  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||||| |||||||||||||| | ||||||||||    
T  20694706 atgactcgaatgaaaacaatacaaaaagttcctcaaa 20694670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 24410879 - 24411014
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||  |||| || || ||||||||| || ||| |||| ||||||||||| |    ||||||| ||| || ||||||| | |||||||    
T  24410879 cttcatgtgatgtcttattttgccaattgacatgatttctcacta-aaaatactcaaaacacctcgcaagttgcacgatttaggataaaactgaattaca 24410977  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| | |||||||||||||| || |||||||||    
T  24410978 acgactcaaatgaaaacaatacaaaattttcctcaaa 24411014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 339
Target Start/End: Complemental strand, 30072393 - 30072220
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat 264  Q
    ||||||| |||||||| |||| | ||  || |||||||||| ||||||||||||||||| | || |||| |||| ||  ||| |||||  |||||||| |    
T  30072393 atcgttcttccgtttggaaacgcatacgaacttgaaatgaaatttcttcactttgtattgtctttaaaaacctttta--agaaccattaatcttcaatct 30072296  T
Q  265 -cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacac 339  Q
     || | ||| ||| ||||||||||||||||||||||||  || | |||||||  | ||||||| ||||||||||||    
T  30072295 tcatatctttgatccttcatgtgatgtcttgatttgtcgattaatatgatttcccactacaaagcactcaaaacac 30072220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 19331629 - 19331541
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||||||||||  ||||| ||||||||| || ||||||| |||||||||||||||||| |||| ||||||||| | ||| ||||||    
T  19331629 aaaagactcaaaacac--atggaattgcatgatttaggataaaactaaattacaacgactcgaatgaacacaatacaaaaagtttctcaaa 19331541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 18452675 - 18452784
Alignment:
Q  191 gaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaa-tatcacaccttggatacttcatgtgatg 289  Q
    |||| |||||||||||||||||||||||||||| | || |||| |||  || |||| |||||| ||||||| | ||| | ||| ||| | ||||||||||    
T  18452675 gaaacttgaaatgaattttcttcactttgtattgttttaaaaaacct--tataagaaccattgatcttcaattttcatatctttgatccctcatgtgatg 18452772  T
Q  290 tcttgatttgtc 301  Q
    ||||||||||||    
T  18452773 tcttgatttgtc 18452784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 22755051 - 22754971
Alignment:
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaa 367  Q
    |||||||||||||    |||||||||||| || || ||||||||||||||||| |||| |||||||| ||||| |||||||    
T  22755051 atgtcttgatttgatgatttacatgatttctcacttcaaaacactcaaaacacctatgaagttgcataatctaggataaaa 22754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 20083585 - 20083495
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||| |||||| ||||||||| || |||| || | ||||||||  |||||| | ||||||||| || ||||||||||||    
T  20083585 aaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattacaaatactcgaataaaaacaataaaaaatgttcctcaaa 20083495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 414
Target Start/End: Original strand, 7742733 - 7742954
Alignment:
Q  191 gaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatg 289  Q
    |||| |||||| || |||||||||||||||||| | ||||||  |||||||  ||| |||||| |||||| | | || | ||| ||| ||||| ||||||    
T  7742733 gaaacttgaaacgatttttcttcactttgtattgtcttcaaagaccttcta--agaaccattgatcttcagtcttcatatcttcgattcttcacgtgatg 7742830  T
Q  290 tcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtg 389  Q
    | ||| |||     |||||||||||| ||  || |||| ||||||||||| ||||   || |||||| || ||||||| | |||||||| |||||||  |    
T  7742831 ttttgttttactgatttacatgatttctcattaaaaaa-actcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaacg 7742929  T
Q  390 aaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||| |||||| |||||    
T  7742930 aaaacaatacaaaatgttcttcaaa 7742954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 19763754 - 19763799
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||||||||||||||||||| | ||||||| |||||||    
T  19763754 ttgaaatgaattttcttcactttgtattatcttcaaaaaccttcta 19763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 414
Target Start/End: Original strand, 23157792 - 23157873
Alignment:
Q  333 aaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| |||| | ||||||||| || ||||||| | |||||||||||||| | |||||||||||| | | ||||||||||    
T  23157792 aaaacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaa 23157873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 25367733 - 25367654
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||||| || ||| |||| ||||||||||| |||| ||||||||||| || ||||||| | |||| |||||||||    
T  25367733 tttacatgatttctcacta-aaaagactcaaaacacctatgaagttgcatgatttatgataaaactgaatttcaacgactc 25367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 22643772 - 22643809
Alignment:
Q  195 tttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  22643772 tttgaaatgaattttcttcagtttgtattgtattcaaa 22643809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 25075268 - 25075329
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatgga 346  Q
    |||||||||||||||    |||||||||||| |  |||||||||||||||||||| ||||||    
T  25075268 tgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatgga 25075329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 25133237 - 25133298
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatgga 346  Q
    |||||||||||||||    |||||||||||| |  |||||||||||||||||||| ||||||    
T  25133237 tgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatgga 25133298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 22967839 - 22967927
Alignment:
Q  326 aacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||| |||||||| |||| |||| ||| || || |||| || | |||||||  |||| || |||||||| ||||||||||||||||||    
T  22967839 aacacacaaaacacctatgaagtttcattatttatgatacaagtgaattacattgacttgaatgaaaacagtacaatatgttcctcaaa 22967927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 9e-46; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 154 - 414
Target Start/End: Complemental strand, 15575212 - 15574954
Alignment:
Q  154 tcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattg 253  Q
    ||||| |||||||| ||| ||||| | ||| ||||||| || |||||||||||||||||||||||||||| | |||||   |||||||  ||| || |||    
T  15575212 tcctgttttcgatctttcttccgtctaaaatctcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacgaccttcta--agaacccttg 15575115  T
Q  254 gtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcat 353  Q
     ||||||||    || | | ||| ||||| ||||||||||||||||| | |||||||||||  || |||||||||||| |||| || |||||||||||||    
T  15575114 atcttcaattcttcatcgttgatccttcacgtgatgtcttgatttgttaatttacatgattcctcgctacaaaacacttaaaaaacctatggagttgcat 15575015  T
Q  354 gatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||| | ||||| ||||||||||||||| |||||||||||||| || ||||||||||||    
T  15575014 gatctaggctaaaactaaattacaacgactagagtgaaaacaatataacatgttcctcaaa 15574954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 182 - 414
Target Start/End: Original strand, 17860303 - 17860533
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttc 281  Q
    |||||||||| || |||||||||||||||||||||||||||| | | ||||| |||||||  ||| ||||||  ||||||| ||  |   |  || ||||    
T  17860303 aaactcctaggaacttgaaatgaattttcttcactttgtattgtctacaaaaaccttcta--agaaccattgtccttcaatttcttatactttatccttc 17860400  T
Q  282 atgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacga 381  Q
    | |||||||| ||||||||    ||||||||||| || |||||||||||||||| ||| |||||||||||||||| |||||||||| ||||| |||| ||    
T  17860401 acgtgatgtcctgatttgttgaattacatgatttctcactacaaaacactcaaagcacgtatggagttgcatgatttaagataaaagtaaatgacaatga 17860500  T
Q  382 ctcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||| ||||||| ||||||||||||    
T  17860501 ctcgagtgaaaataatacaaaatgttcctcaaa 17860533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 414
Target Start/End: Complemental strand, 15998769 - 15998541
Alignment:
Q  183 aactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttca 282  Q
    ||||||||| || ||||||||||||| |||||||||||||| | | ||| | |||||||  ||||||  ||||||||||| ||  | | | |||  ||||    
T  15998769 aactcctaggaacttgaaatgaatttgcttcactttgtattgtctacaacaaccttcta--agagcccatggtcttcaat-tcttatccttgatcattca 15998673  T
Q  283 tgtgatgtcttgatttg-tcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacga 381  Q
      ||||||||||||||| ||| |||||||||||  || |||||||||||||||||||| |||| ||||||||||| || || |||| | |||| ||||||    
T  15998672 catgatgtcttgatttggtca-tttacatgattcctcactacaaaacactcaaaacacctatgaagttgcatgatatatgagaaaacttaatttcaacga 15998574  T
Q  382 ctcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     || || ||||| |||||||||| |||||||||    
T  15998573 atcaagggaaaagaatacaatattttcctcaaa 15998541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 16528002 - 16527920
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| | ||||||    
T  16528002 caaaacacctatgaagttgcatgatctaggataaaaatgaattacaacgactcgagtgaaaacaatataatatggtactcaaa 16527920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 356
Target Start/End: Original strand, 24507391 - 24507469
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgat 356  Q
    ||||| |||||||||||||||||   |||||| ||||| || ||||||||| |||||||||| ||||||||||||||||    
T  24507391 cttcacgtgatgtcttgatttgttgatttacaggatttctcactacaaaactctcaaaacacctatggagttgcatgat 24507469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 13759467 - 13759536
Alignment:
Q  345 gagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||| ||  |||||| | ||||||||||| ||||||||||||||| ||||||||||||||||    
T  13759467 gagttgcatgatatagaataaaattgaattacaacgattcgagtgaaaacaattcaatatgttcctcaaa 13759536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 20495794 - 20495878
Alignment:
Q  329 actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||| |||||||| || |||||||||| | |||||||||||||| | | |||||||| ||| ||||||||||||    
T  20495794 actcaaaacacttatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaa 20495878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 26512777 - 26512855
Alignment:
Q  329 actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    ||||||||||  ||| | ||||||||||||| | ||||| | ||||||||||| |||| |||||||||||||| |||||    
T  26512777 actcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgtt 26512855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 26517893 - 26517971
Alignment:
Q  329 actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    ||||||||||  ||| | ||||||||||||| | ||||| | ||||||||||| |||| |||||||||||||| |||||    
T  26517893 actcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgtt 26517971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 12972360 - 12972456
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    |||||||||||| || ||| |||| ||||||||||| |||| ||||||||||| || |||| || | |||||||||| || || ||||| ||||||||    
T  12972360 tttacatgatttctcccta-aaaagactcaaaacacgtatgaagttgcatgatttaggatacaactgaattacaacgtcttgaatgaaagcaatacaa 12972456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 26499710 - 26499779
Alignment:
Q  191 gaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaat 262  Q
    |||| ||||||||||||||||| |||||||||| | ||||||| ||||||  |||| |||||| ||||||||    
T  26499710 gaaacttgaaatgaattttctttactttgtattgtcttcaaaaaccttct--aagaaccattgatcttcaat 26499779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 30355437 - 30355363
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    |||||||| |||  ||||||||||| || ||||||| | ||||| ||||||| ||||||||| |||||||||||||    
T  30355437 caaaacacctataaagttgcatgatttatgataaaagtgaattaaaacgacttgagtgaaaa-aatacaatatgtt 30355363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 9943144 - 9943234
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||| ||||||| |||||||||||||||| || ||||||| | |||||||||  || || ||| ||| |||||| || |||||||||    
T  9943144 aaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattacaacagcttgaatgataactatacaaaatattcctcaaa 9943234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 164 - 414
Target Start/End: Complemental strand, 30999049 - 30998801
Alignment:
Q  164 gatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaata 263  Q
    |||||||| ||||||||||||||| ||  || |||||||||||||||| ||||||||||| | ||||| | |||||||  ||| || ||| ||||||||     
T  30999049 gatcgttcttccgtttgaaaactcatatgaacttgaaatgaattttctccactttgtattgtcttcaacaaccttcta--agaacccttgatcttcaatt 30998952  T
Q  264 tcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagat 363  Q
     || | | | ||| |||||  |||| ||||||||||||  ||||||| | |  || |||||||||||||||||||| |||||||||| |||||||| |||    
T  30998951 acatatccttgatccttcacttgatatcttgatttgtcgatttacatcactcttcactacaaaacactcaaaacacctatggagttgtatgatctaggat 30998852  T
Q  364 aaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| | || ||||||||||| |||||||||||||||||||||||||||||    
T  30998851 aaaactgaagtacaacgactcaagtgaaaacaatacaatatgttcctcaaa 30998801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 141 - 367
Target Start/End: Original strand, 27417076 - 27417301
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    ||||| ||||| |||| | |||| ||||||| ||||| || |||||||| | || |||||||||||||||||||||||||||| | ||||||| ||||||    
T  27417076 tcttgagttttcgtcccgttttcaatcgttcttccgtctggaaactccttggaacttgaaatgaattttcttcactttgtattgttttcaaaaaccttct 27417175  T
Q  241 agaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacac 339  Q
       ||| |||||||||||||| || || | | | ||| ||||||||||||||||||||||||  |||||||||||| || |||||||||||| |||||||    
T  27417176 t--agaaccattggtcttcaacattcatatcattgatccttcatgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacac 27417273  T
Q  340 ttatggagttgcatgatctaagataaaa 367  Q
     |||||||||||||||| || |||||||    
T  27417274 ctatggagttgcatgatttaggataaaa 27417301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 35031868 - 35031732
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| |||||||||||   |||| ||||||  |  |||||||||||||||||||| |||||| |||||||||||| ||||||| ||| |||||    
T  35031868 cttcatgtgatatcttgatttgtatatttatatgattcctgactacaaaacactcaaaacacctatggaattgcatgatctaggataaaagtaagttaca 35031769  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||||||||||||||||||||    
T  35031768 acgactcgagtgaaaacaatacaatatgttcctcaaa 35031732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 414
Target Start/End: Original strand, 21505004 - 21505224
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtc 291  Q
    ||||||||||||||||||||||  ||||||| | ||||||| ||||||   ||| ||||||||||||||  | |||| | | |||  |||||||||||||    
T  21505004 aatttgaaatgaattttcttcaacttgtattgtcttcaaaaaccttctc--agaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtc 21505101  T
Q  292 ttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaa 391  Q
    || |||| ||  |||||||||||  || |||||||||||||||||||  || | ||||||||||| || ||||||| ||||||| || ||||||||||||    
T  21505102 ttaatttatcgatttacatgattcctcactacaaaacactcaaaacatctaagaagttgcatgatttaggataaaagtaaattataaagactcgagtgaa 21505201  T
Q  392 aacaatacaatatgttcctcaaa 414  Q
    |||||||||||||| ||||||||    
T  21505202 aacaatacaatatgctcctcaaa 21505224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 182 - 406
Target Start/End: Original strand, 16593605 - 16593827
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttc 281  Q
    |||||||||| || |||||||||||||||||||||||||||| | ||||| | |||||||  ||| || ||| |||||| |    || | | ||| ||||    
T  16593605 aaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttcta--agaacccttgatcttcatttcttcatcgttgatccttc 16593702  T
Q  282 atgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacga 381  Q
    |  |||||||||||||||    |||||||||||  || |||||||||||||| ||||| ||||||||||||||||||| ||||||| | ||||| ||| |    
T  16593703 aaatgatgtcttgatttgatgatttacatgattcttcactacaaaacactcagaacacctatggagttgcatgatctaggataaaactgaattaaaacaa 16593802  T
Q  382 ctcgagtgaaaacaatacaatatgt 406  Q
    ||||||||||||||||| |||||||    
T  16593803 ctcgagtgaaaacaatataatatgt 16593827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 19949545 - 19949639
Alignment:
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||| ||||||||| ||| |||||  |||||| || ||||||||||||| |||||||| ||||||||||||||||||||    
T  19949545 ctacaaaacactcaaaacacctatggagtttcattatctataataaaactatattacaacgactcaagtgaaaataatacaatatgttcctcaaa 19949639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 414
Target Start/End: Complemental strand, 25474282 - 25474067
Alignment:
Q  197 tgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgat 296  Q
    |||||||||||||||||||||| |||| | ||||| | |||||||  ||| || |||  |||||||   ||| | | ||| |||||  ||||||||||||    
T  25474282 tgaaatgaattttcttcactttatattgtcttcaacaaccttcta--agaacccttgaccttcaattctacatccttgattcttcacatgatgtcttgat 25474185  T
Q  297 ttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaa 396  Q
    |||    |||||||||||  || |||||||||| ||||||||| | ||||||||||||||||| ||||| | | ||||||| || || |||||||| |||    
T  25474184 ttgatgatttacatgattcctcactacaaaacagtcaaaacacctttggagttgcatgatctaggataatactgaattacagcgtcttgagtgaaaccaa 25474085  T
Q  397 tacaatatgttcctcaaa 414  Q
    | ||||||||||||||||    
T  25474084 ttcaatatgttcctcaaa 25474067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 398
Target Start/End: Original strand, 18236171 - 18236371
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttg 294  Q
    |||||||||||||||||||  ||||||| | ||||| | |||||||  ||| ||||||| ||||||| | || |  |  ||| |||||||||||||||||    
T  18236171 ttgaaatgaattttcttcatcttgtattgtcttcaacaaccttcta--agaaccattggccttcaatcttcatatttgtgatccttcatgtgatgtcttg 18236268  T
Q  295 atttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaac 394  Q
     |||| |   ||||||||||| || ||| |||| |||||||| ||||||||||||||||||| |||||||||| | ||||| ||| |||||| |||||||    
T  18236269 ttttgccgagttacatgatttctcacta-aaaagactcaaaatacttatggagttgcatgatttaagataaaagtgaattataacaactcgaatgaaaac 18236367  T
Q  395 aata 398  Q
    ||||    
T  18236368 aata 18236371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 414
Target Start/End: Complemental strand, 17152311 - 17152183
Alignment:
Q  286 gatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcg 385  Q
    ||||||||| |||| |  |||||||||||| |  ||| |||| ||||||||||||||  |||||||||||  || ||||||| | |||||||||||||||    
T  17152311 gatgtcttgttttgccgatttacatgatttcttactaaaaaaaactcaaaacacttacagagttgcatgaattacgataaaagttaattacaacgactcg 17152212  T
Q  386 agtgaaaacaatacaatatgttcctcaaa 414  Q
    | |||||| ||||||| || |||||||||    
T  17152211 aatgaaaataatacaaaatattcctcaaa 17152183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 28278416 - 28278508
Alignment:
Q  322 acaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||| |||| |  ||||||||||||||||||| ||||||| | |||||||||||||| |||||||| |||||| ||||||| |||||    
T  28278416 acaaaacacttaaaatatctatggagttgcatgatctaggataaaagtgaattacaacgactcaagtgaaaataatacactatgttcttcaaa 28278508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 414
Target Start/End: Complemental strand, 35708104 - 35707833
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    |||||||||||  ||||| |||||||||||| | ||| |||||||||||   || ||||||| |||||| |||| |||||||| | ||||| | ||||||    
T  35708104 tcttgtgttttcttcctgttttcgatcgttctttcgtctgaaaactcctgagaacttgaaataaattttgttcattttgtattgtcttcaacaaccttct 35708005  T
Q  241 agaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacact 340  Q
    |  |||  | ||| | ||||||    || | | |||||||||  ||||||||||||||     |||||||||||  || ||||||||||||||||||||     
T  35708004 a--agaaaccttgatattcaattcttcatccttgatacttcacatgatgtcttgattttatgatttacatgattcctcactacaaaacactcaaaacacc 35707907  T
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||| |    ||||| ||||||| | ||||||||| | || |||||||||||||||| ||||| ||||||    
T  35707906 tatgaagtcgtgcaatctaggataaaactgaattacaacaaatcaagtgaaaacaatacaacatgtttctcaaa 35707833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 21843006 - 21843083
Alignment:
Q  333 aaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||| ||| |||||||||||| || ||||||| |||||||||| ||||||| |||||||||||||| ||||||||    
T  21843006 aaaacacctatagagttgcatgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcct 21843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 399
Target Start/End: Original strand, 27917932 - 27918053
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||| |||||||||||||||||  || ||||||||| |  ||| | || | ||||||||| |||||||||||||||| ||  |||||| | |||||||    
T  27917932 cttcatctgatgtcttgatttgtcgattgacatgatttcttactatagaatagtcaaaacacctatggagttgcatgatttagtataaaagtgaattaca 27918031  T
Q  378 acgactcgagtgaaaacaatac 399  Q
    ||||||| | ||||||||||||    
T  27918032 acgactcaaatgaaaacaatac 27918053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 19541176 - 19541067
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||| || ||| |||  ||||||||||| |||||||||||||||| || ||||||| | |||||||| ||||||| |||||  ||||||| |    
T  19541176 tttacatgatttctcactagaaag-actcaaaacacctatggagttgcatgatttaggataaaactgaattacaatgactcgattgaaataaatacaaaa 19541078  T
Q  404 tgttcctcaaa 414  Q
     ||||||||||    
T  19541077 agttcctcaaa 19541067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 34063840 - 34063930
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||||| |||||||||||||| || ||||| | | ||||||||| |||||| |||||||||||||| | ||||| ||||    
T  34063840 aaaaaactcaaaacacttgtggagttgcatgatttaggataatagtgaattacaacaactcgaatgaaaacaatacaaaaagttccacaaa 34063930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 410
Target Start/End: Complemental strand, 24188135 - 24188000
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatg---atctaagataaaaataaatt 374  Q
    |||||||||||| ||||||| |||  |||||||||||| || |||||||| ||||||||||| | |||||||| |||   || || ||||||| | |||     
T  24188135 cttcatgtgatgccttgattggtcgatttacatgatttctcactacaaaatactcaaaacacatttggagttgaatgaatatttaggataaaagtgaatc 24188036  T
Q  375 acaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||| ||||||| |||| ||||||||| | ||||||    
T  24188035 acaatgactcgaatgaatacaatacaaaaagttcct 24188000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 22511104 - 22510989
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||||||| ||  |||||||||||| || |||||||||| ||||||||| |||  |||||||  || || ||||||  ||||||||| ||||||    
T  22511104 tgatgtcttgatttttcgatttacatgatttctcactacaaaacaatcaaaacac-tatatagttgcacaatttaggataaacgtaaattacagcgactc 22511006  T
Q  385 gagtgaaaacaatacaa 401  Q
    || |||||| |||||||    
T  22511005 gaatgaaaaaaatacaa 22510989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 15829391 - 15829348
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtatttt 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  15829391 aaactcctagaaatttgaaatgaattttctttactttgtatttt 15829348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 17240812 - 17240923
Alignment:
Q  284 gtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgact 383  Q
    ||||||||||| |||| || |||| ||||||| || ||| |||||||||||  ||| |||| ||||||||||| ||  |||||| |||||||| ||||||    
T  17240812 gtgatgtcttgttttgccaatttatatgatttttcacta-aaaacactcaa--cacctatgaagttgcatgatttagaataaaactaaattacgacgact 17240908  T
Q  384 cgagtgaaaacaata 398  Q
    ||| |||||||||||    
T  17240909 cgaatgaaaacaata 17240923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 1733379 - 1733310
Alignment:
Q  154 tcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtatt 223  Q
    ||||| ||||||| |||| ||||| ||||||||||||| ||| | ||||||||||| |||||||||||||    
T  1733379 tcctgttttcgattgttcttccgtctgaaaactcctaggaatctaaaatgaattttattcactttgtatt 1733310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 24047485 - 24047416
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||||| || || ||||||| | |||||||| ||||||| |||||||||||||| ||||||||    
T  24047485 tatggagttgcataatttaggataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcct 24047416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 21849023 - 21849157
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||| | |  |  ||||||| |||| || ||| |||| ||||||||  | |||||||||||||||| || ||||||| | |||||||    
T  21849023 cttcatgtgatgtcttgttcttccgatttacattatttctcacta-aaaagactcaaaaatcctatggagttgcatgatttatgataaaactgaattaca 21849121  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | ||||| |  ||||||||||||| ||||||||||||    
T  21849122 atgactc-aaagaaaacaatacaaaatgttcctcaaa 21849157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 19949376 - 19949422
Alignment:
Q  179 tgaaaactcctagaaatttgaaatgaattttcttcactttgtatttt 225  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  19949376 tgaaaactcctaggaacttgaaatgaattttcttcactttgtttttt 19949422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 1733212 - 1733131
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    |||||||| |||  |||| |||| |||| ||||||| | |||||||||||||| | ||||||||||||||| |||| |||||    
T  1733212 caaaacacctatatagtttcatgctctaggataaaactgaattacaacgactcaaatgaaaacaatacaatttgtttctcaa 1733131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 15829242 - 15829164
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||| |||||||||||||||| || ||||||| |    ||||||||||  |||||||||||||||||  ||||||||||    
T  15829242 caaaacacatatggagttgcatgatttaggataaaagt----tacaacgacttaagtgaaaacaatacaatgcgttcctcaaa 15829164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 18818800 - 18818731
Alignment:
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||||| ||||||||| || ||||||| |||||| ||||||||| | ||||||||||| || ||||||||    
T  18818800 tatggacttgcatgatttatgataaaactaaatttcaacgactcaaatgaaaacaatataaaatgttcct 18818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 21844646 - 21844710
Alignment:
Q  346 agttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||| || ||||| | |||||||||| ||||||| ||||||||||| || ||||||||    
T  21844646 agttgcatgatttaggataagagtaaattacaatgactcgaatgaaaacaatataacatgttcct 21844710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 410
Target Start/End: Complemental strand, 39730612 - 39730481
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||| ||||    |||| ||||||| || ||| |||| ||||||||||| |   |||||||||||| || ||||||| | |||||||    
T  39730612 cttcatgtgatgtcttgttttgctgatttatatgatttctcacta-aaaatactcaaaacacctgcagagttgcatgatttaggataaaagtgaattaca 39730514  T
Q  378 acgactcgagtgaaaacaatacaatatgttcct 410  Q
    |||||| || | ||||| ||| || ||||||||    
T  39730513 acgacttgaataaaaactatagaaaatgttcct 39730481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 398
Target Start/End: Complemental strand, 32619750 - 32619684
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaata 398  Q
    |||||||| ||||||||| ||||||||| ||  ||| |  ||||||||||||||| |||||||||||    
T  32619750 caaaacacctatggagttacatgatctaggacgaaagtgcattacaacgactcgattgaaaacaata 32619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 1732716 - 1732679
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgattt 315  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  1732716 cttcatgtgatgtcttgttttgtcaatttacatgattt 1732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 141 - 414
Target Start/End: Complemental strand, 28902390 - 28902119
Alignment:
Q  141 tcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttct 240  Q
    ||||| ||||| |||| | |||| ||||||| | ||| ||||||||||||| || || ||||||||||| ||||||||||||| | ||||| | ||||||    
T  28902390 tcttgcgttttcgtcccgttttcaatcgttctttcgtctgaaaactcctaggaacttaaaatgaattttattcactttgtattgtcttcaataaccttct 28902291  T
Q  241 agaagagccattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacact 340  Q
    |  ||| ||||||||||| ||| | | | | | ||| ||||| ||||||||| |||||||   |||||||||||| || |||| ||||||| ||||||||    
T  28902290 a--agaaccattggtctttaatttaatatcattgatccttcacgtgatgtctcgatttgttgatttacatgatttctcactactaaacactaaaaacact 28902193  T
Q  341 tatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||| |||| || | || ||||||| | |||||||||||||||| |||||||||||||||||||| ||||||    
T  28902192 tatggatttgcgtggtataggataaaagtgaattacaacgactcgaatgaaaacaatacaatatgtttctcaaa 28902119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 32239453 - 32239317
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||| ||||||||| |||||| ||||| || ||||||||||||||||||| ||||||||||||||||| |||||||||| | |||| ||    
T  32239453 cttcatgtgatgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatggagttgcatgatttaagataaaagtgaattgca 32239354  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| ||| |||||||||||||||||| ||||||    
T  32239353 acgactcaagtaaaaacaatacaatatgttactcaaa 32239317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 160 - 410
Target Start/End: Complemental strand, 16054576 - 16054328
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| |  || || |||||||||| || |||||||||||||||||||||||||||||| ||||| | |||||||  ||| || ||| |||||    
T  16054576 tttcgatcgttcttttgtctggaaactcctaggaacttgaaatgaattttcttcactttgtattttcttcaacaaccttcta--agaacccttgatcttc 16054479  T
Q  260 aat--atcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatc 357  Q
    |||  |||| |||||| || |||||  ||||||||||| ||     |||||||||||  || |||||||||| ||||||||  |||||||||  ||||||    
T  16054478 aattcatca-accttg-atccttcacatgatgtcttgaattaatgatttacatgattcctcactacaaaacaatcaaaacatctatggagttttatgatc 16054381  T
Q  358 taagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
    || ||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  16054380 taggataaaaatgaattacaacaactcgagtgaaaacaatacaaaatgttcct 16054328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 407
Target Start/End: Original strand, 16052109 - 16052355
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    ||||||| |||| ||||| |  ||||||| || || ||||||||||||||||||| |||||||| | ||||||| |||||||  |||  ||||||||||     
T  16052109 tttcgattgttcttccgtctagaaactccaaggaacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttcta--agaatcattggtcttt 16052206  T
Q  260 aatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatct 358  Q
    ||| | || | | |  || |||||||||||||||||||||||   |||| ||||||| || |||||||||||||||||||| ||| |||||||||||| |    
T  16052207 aatcttcatatcctttatccttcatgtgatgtcttgatttgttgatttagatgatttctcactacaaaacactcaaaacacctattgagttgcatgattt 16052306  T
Q  359 aagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    ||| ||||  | ||||| ||||||||||||||||||| || ||||||||    
T  16052307 aaggtaaatgtgaattataacgactcgagtgaaaacattaaaatatgtt 16052355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 24584675 - 24584809
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaa 378  Q
    ||||||||||||||||||| |||| |||||| ||||| || |||||||| |||||||| || ||| |||||||||||| || ||||||||| ||||||||    
T  24584675 ttcatgtgatgtcttgatt-gtcaatttacaagatttctcactacaaaaaactcaaaatacctatagagttgcatgatttatgataaaaatgaattacaa 24584773  T
Q  379 cgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
     ||||||| |||||||||||||| |  |||||||||    
T  24584774 tgactcgaatgaaaacaatacaaaaaattcctcaaa 24584809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 414
Target Start/End: Original strand, 5570096 - 5570226
Alignment:
Q  284 gtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgact 383  Q
    ||||||||| ||||||||  ||||||| ||   || ||| |||||||||||||||| || | ||||||||||| || ||||||| | ||||||||| |||    
T  5570096 gtgatgtctcgatttgtcgatttacataatgcatcactagaaaacactcaaaacacctacgaagttgcatgatataggataaaagtgaattacaacaact 5570195  T
Q  384 cgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||||||||||||||    
T  5570196 cgagtgaaaacaatacaatatgttcctcaaa 5570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 410
Target Start/End: Complemental strand, 26882566 - 26882442
Alignment:
Q  286 gatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcg 385  Q
    ||||||||||||||    |||||||||||  || |||||||||| ||||||||| ||||||||||||||||||| ||||||| || ||||  | ||||||    
T  26882566 gatgtcttgatttgatgatttacatgattcctcactacaaaacaatcaaaacacctatggagttgcatgatctaggataaaactatattatgatgactcg 26882467  T
Q  386 agtgaaaacaatacaatatgttcct 410  Q
    ||||||||||||||| |||| ||||    
T  26882466 agtgaaaacaatacattatgctcct 26882442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 387
Target Start/End: Complemental strand, 24696878 - 24696638
Alignment:
Q  147 gtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttc-actttgtattttattcaaaagccttctagaag 245  Q
    |||||||||| | |||||||||||  ||||| |  ||| ||||||||| |||||||||||||| ||  |||||||||||| ||||||| |||||||  ||    
T  24696878 gtttttgtcccgttttcgatcgtttttccgtctagaaaatcctagaaacttgaaatgaatttttttttactttgtattttcttcaaaaaccttcta--ag 24696781  T
Q  246 agccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatg 344  Q
    | | | ||||||||||| | || | | | ||| ||| |||||||||||||||||||   |||||||||||| |  ||| |||||||| ||||||| | ||    
T  24696780 aacaagtggtcttcaatcttcatatccttgatcctttatgtgatgtcttgatttgttgatttacatgatttcttactataaaacactaaaaacacctgtg 24696681  T
Q  345 gagttgcatgatctaagataaaaataaattacaacgactcgag 387  Q
     | ||| ||||| || |||| || |||||||||||||||||||    
T  24696680 aaattgtatgatttaggatagaagtaaattacaacgactcgag 24696638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 28901355 - 28901425
Alignment:
Q  344 ggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28901355 ggagttgcattatctaggataaaaacgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 28901425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 410
Target Start/End: Original strand, 29047294 - 29047400
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||  || |||||||||||||||||||  ||||||||||||||||| |  |||||| | |||||||  |||||||||||||||||||||||     
T  29047294 tttacatgattcctcactacaaaacactcaaaacatatatggagttgcatgatccattataaaattgaattacagtgactcgagtgaaaacaatacaatg 29047393  T
Q  404 tgttcct 410  Q
    |||||||    
T  29047394 tgttcct 29047400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 22894480 - 22894615
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| ||||||||| ||  |||||||||||| || ||| | |||||| |||| || |||||||||| |||||||||||||||| | ||| |||    
T  22894480 cttcatgtgatatcttgattt-tcgatttacatgatttctcactatagaacactaaaaatacctatggagttgaatgatctaagataaaagtgaatcaca 22894578  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | || ||||||| ||| |||||||||||| |||||||    
T  22894579 atgattcgagtgtaaagaatacaatatgtacctcaaa 22894615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 14977059 - 14977192
Alignment:
Q  279 ttcatgtgatgtcttgatttgtcagtttacatgatttgtctc--tacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattac 376  Q
    |||||||||||||||||||||||| ||||||||| || || |  ||||||||||  | |     |||||||||||||||| || ||||||| | ||||||    
T  14977059 ttcatgtgatgtcttgatttgtcaatttacatgacttctcccactacaaaacacctata-----tatggagttgcatgatttaggataaaagtgaattac 14977153  T
Q  377 aacgactcgagtg-aaaacaatacaatatgttcctcaaa 414  Q
    || |||||||||| |||||||||||||||||||||||||    
T  14977154 aatgactcgagtgaaaaacaatacaatatgttcctcaaa 14977192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 13081928 - 13082022
Alignment:
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||| |||||||||| |||| |||||||||||||| |||| || | ||||||||| ||||||||||||||| |||||  |||| ||||||    
T  13081928 ctacaaaactctcaaaacacctatgaagttgcatgatctaggatacaactgaattacaactactcgagtgaaaacactacaacgtgtttctcaaa 13082022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 35135417 - 35135499
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgt 406  Q
    |||| ||||||||||| | |||||||||||||| || ||||||||| |||||||| ||||||||| |||||||||||| ||||    
T  35135417 aaaagactcaaaacacatgtggagttgcatgatttaggataaaaatgaattacaatgactcgagtaaaaacaatacaaaatgt 35135499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 414
Target Start/End: Original strand, 27097755 - 27097886
Alignment:
Q  284 gtgatgtcttgatttgtcagtttacatgatttgtctctacaaaac-actcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgac 382  Q
    ||||||||||| |||| |  |||||||||||| || ||| ||||  |||  |||||| |||| ||||||||||| || ||||||| | ||||||||||||    
T  27097755 gtgatgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaacacctatgaagttgcatgatttatgataaaactgaattacaacgac 27097854  T
Q  383 tcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    || | |||||||||| ||| ||||||||||||    
T  27097855 tcaaatgaaaacaatgcaacatgttcctcaaa 27097886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 12956601 - 12956519
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||| ||| ||||| |||||| || ||||||| | |||||| | ||||||||||||||||||||||||| |||||||||    
T  12956601 caaaacacctatagagttacatgatttaggataaaagtgaattacgatgactcgagtgaaaacaatacaatattttcctcaaa 12956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 14424788 - 14424897
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||| || ||| ||||  || ||||||| |||||||||||||||| || ||||||| | |||||||||||||||| ||||||| ||| || |    
T  14424788 tttacatgatttctcactaaaaaaacct-aaaacacctatggagttgcatgatttaggataaaactgaattacaacgactcgaatgaaaaccatataaaa 14424886  T
Q  404 tgttcctcaaa 414  Q
     ||||||||||    
T  14424887 agttcctcaaa 14424897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 414
Target Start/End: Complemental strand, 10867126 - 10867018
Alignment:
Q  305 ttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatat 404  Q
    ||||||||||| || ||| |||| | ||||| ||| | |||||||||||||| | |||||||| | |||||||||||||| | |||||||||||||| ||    
T  10867126 ttacatgatttctcacta-aaaagattcaaagcacctttggagttgcatgatttgagataaaactgaattacaacgactcaaatgaaaacaatacaaaat 10867028  T
Q  405 gttcctcaaa 414  Q
     |||||||||    
T  10867027 attcctcaaa 10867018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 11437577 - 11437462
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||| |||| |  |||||||||||| || ||| |||| |||||||| || ||||||||||||||| ||| ||| ||| | ||||| ||||||||    
T  11437577 tgatgtcttgttttgccgatttacatgatttctcacta-aaaagactcaaaatacatatggagttgcatgacctatgatgaaactgaattataacgactc 11437479  T
Q  385 gagtgaaaacaatacaa 401  Q
    || ||||||||| ||||    
T  11437478 gaatgaaaacaacacaa 11437462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 28074678 - 28074557
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||| |||||||||| ||||    |||||||||||| || ||| |||| |||| |||||| |||||||||||||||| || ||||||| | |||| ||    
T  28074678 cttcatttgatgtcttgttttgcatatttacatgatttctcacta-aaaagactcgaaacacctatggagttgcatgatttaggataaaagtgaattgca 28074580  T
Q  378 acgactcgagtgaaaacaatacaa 401  Q
    ||||||| | ||||||||||||||    
T  28074579 acgactc-aatgaaaacaatacaa 28074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 5153914 - 5153801
Alignment:
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcga 386  Q
    |||||||| |||| |  |||||||||||| |  ||| |||| ||||||||||| ||| |||||| ||||| |||||||||| | |||||||| |||||||    
T  5153914 atgtcttgttttgcctatttacatgatttcttacta-aaaagactcaaaacacctatcgagttgaatgatttaagataaaactgaattacaatgactcga 5153816  T
Q  387 gtgaaaacaatacaa 401  Q
     |||||| |||||||    
T  5153815 atgaaaataatacaa 5153801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 393
Target Start/End: Complemental strand, 29292019 - 29291821
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtc 291  Q
    ||||||||||||||||| |||||||| | || | ||||||  |||||||  ||| |||||| |||||||||| || | | | ||| ||||| ||||| ||    
T  29292019 aatttgaaatgaatttttttcactttctgttgtcttcaaagaccttcta--agaaccattgatcttcaatattcatatcctcgattcttcacgtgatatc 29291922  T
Q  292 ttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaa 391  Q
    ||| |||| |  |||||||||||| |  ||| |||| |||||||| ||||||  ||||||||||| || ||||||| |  ||||||||||||| | ||||    
T  29291921 ttgttttgccgatttacatgatttcttacta-aaaagactcaaaatacttataaagttgcatgatttaggataaaactgcattacaacgactcaaatgaa 29291823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 11310089 - 11310169
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||| ||||| |  |||||||||| || ||||||| |||||||||||||||||||| | ||||||| |||||||    
T  11310089 tttcgatcgttcttccgtctagaaactcctaggaacttgaaat-aattttcttcactttgtattgttttcaaaaaccttcta 11310169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 28260265 - 28260369
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||| || ||| |||| ||||||||||| ||||||||  |||||| || ||||||  |||||||||||||||  | |||||| ||||||| |    
T  28260265 tttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacctaaattacaacgactaaaatgaaaataatacaaaa 28260363  T
Q  404 tgttcc 409  Q
    ||||||    
T  28260364 tgttcc 28260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 31436635 - 31436525
Alignment:
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcga 386  Q
    |||||||| |||||   |||||||||||| || ||| |||| | ||||||||| |||| ||||||||||| || ||||||| |||||||||  |||||||    
T  31436635 atgtcttgttttgttgatttacatgatttctcacta-aaaagattcaaaacacctatgtagttgcatgatttaggataaaactaaattacactgactcga 31436537  T
Q  387 gtgaaaacaata 398  Q
     |||||| ||||    
T  31436536 atgaaaaaaata 31436525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 24120537 - 24120452
Alignment:
Q  128 ctcctgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttca 214  Q
    |||||||||||  |||||||||||| ||||| |||  ||||||| ||||| || ||| |||||| || |||||||||||||||||||    
T  24120537 ctcctgtgtgagttcttgtgtttttatcctgttttt-atcgttcttccgtctggaaattcctaggaacttgaaatgaattttcttca 24120452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 11310223 - 11310282
Alignment:
Q  348 ttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgtt 407  Q
    |||||||||||| ||||||||| ||||| ||| ||| |||||||||||| | ||||||||    
T  11310223 ttgcatgatctaggataaaaatgaattataacaacttgagtgaaaacaaaaaaatatgtt 11310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 13081789 - 13081848
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||| |||||| ||||||||||||||||||| |||||||| | ||||| | |||||||    
T  13081789 aaactcatagaaacttgaaatgaattttcttcattttgtattgtcttcaacaaccttcta 13081848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 365
Target Start/End: Original strand, 28859188 - 28859275
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataa 365  Q
    ||||||||||||| | | ||||||  |||||||||||| |  ||||||||| |||||||||| ||||| ||||| |||| || |||||    
T  28859188 cttcatgtgatgtttaggtttgtccatttacatgatttcttactacaaaaccctcaaaacacatatggtgttgcgtgatttaggataa 28859275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 30543926 - 30543804
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||| ||||| |||  |  |||||||||||| || | | |||| ||||||||||| |||  | ||||||||| || ||||||| | |||||||    
T  30543926 cttcatgtgatatcttgttttaccgatttacatgatttctcacca-aaaagactcaaaacacctatataattgcatgatttaggataaaagtgaattaca 30543828  T
Q  378 acgactcgagtgaaaacaatacaa 401  Q
    || |||| | ||||||||||||||    
T  30543827 acaactcaaatgaaaacaatacaa 30543804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 28901204 - 28901245
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtatt 223  Q
    |||||||||| |  ||||||||||||||||||||||||||||    
T  28901204 aaactcctaggagcttgaaatgaattttcttcactttgtatt 28901245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 30850968 - 30851004
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  30850968 ttgaaattaattttcttcactttgtattatattcaaa 30851004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 414
Target Start/End: Complemental strand, 21658 - 21427
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatactt 280  Q
    ||||||||| ||| ||||||||||| ||||| |||||||||| | || |||| |||||||  ||| |||||| |||||||| | || | | | ||| |||    
T  21658 aaactcctataaacttgaaatgaatattcttaactttgtattgtctttaaaaaccttcta--agaaccattgatcttcaatcttcatatcattgatcctt 21561  T
Q  281 catgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacg 380  Q
    ||||| |||||||| ||||||  |||||||||||  || || |||||||| ||||||| ||||| ||||||||||| || ||||||| | ||||||||||    
T  21560 catgtaatgtcttggtttgtcgatttacatgattcctcactgcaaaacacccaaaacaattatgaagttgcatgatttaggataaaagtgaattacaacg 21461  T
Q  381 actcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||||||||||||| ||||||||||    
T  21460 actcgagtgaaaacaatacaataagttcctcaaa 21427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 182 - 414
Target Start/End: Complemental strand, 6455 - 6226
Alignment:
Q  182 aaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttggatacttc 281  Q
    |||||||||| || ||||| ||| |||||||||||||||||||| |||||||  |||||||  || ||||||||||||||| ||| | | | ||| ||||    
T  6455 aaactcctaggaacttgaattgatttttcttcactttgtattttcttcaaaaatcttctag--gaaccattggtcttcaatttcatatccttgatccttc 6358  T
Q  282 atgtgatgtcttgatttgtcagtttacatgatttgtctc--tacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaac 379  Q
    | ||||||||||||||||||  |||||||||||| ||||  ||||||||||| | ||||| |   ||| |||| | |||| ||||||| ||||||||||     
T  6357 acgtgatgtcttgatttgtcgatttacatgattt-tctcaatacaaaacacttataacacctt--gaggtgcaagctctaggataaaagtaaattacaat 6261  T
Q  380 gactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||| |||||| |||||||||||||    
T  6260 gacttgagtgaaaataatacattatgttcctcaaa 6226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 414
Target Start/End: Complemental strand, 21018170 - 21017907
Alignment:
Q  149 ttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagc 248  Q
    ||||||| || ||| |||||||| ||| |||| ||| |||||| || ||||||||||||| ||||| |||||||| | |||||||   || |||||   |    
T  21018170 ttttgtcatgtttttgatcgttcttccatttgtaaattcctaggaacttgaaatgaatttccttcattttgtattatcttcaaaaaagttatagaaa--c 21018073  T
Q  249 cattggtcttcaatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagt 348  Q
    |||||||||||||| ||| | | | ||| ||||| || ||||||||||||||    ||||||||||| ||  ||||||||||||||||||| | | ||||    
T  21018072 cattggtcttcaatttcatatcattgatccttcacgtaatgtcttgatttgttgaattacatgatttctcaatacaaaacactcaaaacacatttagagt 21017973  T
Q  349 tgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||| ||||||| | |||||||||||||||  |||||| |||| |||||||||||||||    
T  21017972 tgcatgatctaggataaaactgaattacaacgactcggttgaaaataatataatatgttcctcaaa 21017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 415
Target Start/End: Complemental strand, 25883385 - 25883132
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    ||||||| |||| | ||| ||||||||||||| || |||||||||||||||||||||||||||| | ||||| | |||||||  ||| || ||| |||||    
T  25883385 tttcgattgttctttcgtctgaaaactcctaggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttcta--agaacccttgatcttc 25883288  T
Q  260 aatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatcta 359  Q
    |||    || | | ||| ||| |   ||||||||||||||    | |||||||||  || ||| |||||||||||||||| |||| |||||||| |||||    
T  25883287 aattcttcatccttgatccttaacaagatgtcttgatttgatgatgtacatgattcctcactataaaacactcaaaacacctatgtagttgcataatcta 25883188  T
Q  360 agataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaa 415  Q
     ||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||    
T  25883187 ggataaaactgaattacaacgattcgagtgaaaacaatataatatgttcctcaaaa 25883132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 193 - 414
Target Start/End: Original strand, 19219076 - 19219296
Alignment:
Q  193 aatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtc 291  Q
    ||||||||||||||||| ||||||||||||| | ||||||| |||||||  ||| |||||| |||||||| | || | | | ||| ||||||||||||||    
T  19219076 aatttgaaatgaattttattcactttgtattgtcttcaaaaaccttcta--agaaccattgatcttcaatcttcatatccttgatccttcatgtgatgtc 19219173  T
Q  292 ttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaa 391  Q
    ||| ||||    |||||||||||  || ||||||||||||||||||| |||||| |||||||||| |  ||||||| | |||||||||||||| ||||||    
T  19219174 ttggtttgaagatttacatgattcctcactacaaaacactcaaaacatttatggtgttgcatgattttggataaaagtgaattacaacgactctagtgaa 19219273  T
Q  392 aacaatacaatatgttcctcaaa 414  Q
    |  |||| |||||| ||||||||    
T  19219274 agtaataaaatatgctcctcaaa 19219296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 410
Target Start/End: Complemental strand, 27415449 - 27415205
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttc 259  Q
    |||||||||||| | ||| |  |||||||||| || ||||||||||||||||||||||| ||| |  | ||||| | |||||  ||| | | ||||||||    
T  27415449 tttcgatcgttctttcgtcttgaaactcctaggaagttgaaatgaattttcttcactttttatgtc-tccaaaaacattcta--agaactaatggtcttc 27415353  T
Q  260 aatatcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatcta 359  Q
    |||  |  | | | ||| ||| |||||||||||||||| |||  |||||||||||| |  |||||||||||||||||||| |||| ||||||||||| ||    
T  27415352 aattccttatccttgatcctttatgtgatgtcttgattggtctatttacatgatttcttactacaaaacactcaaaacacctatgaagttgcatgattta 27415253  T
Q  360 agataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcct 410  Q
     ||||||| | ||||   |||||||||||||||||||||||||||||||||    
T  27415252 cgataaaagtgaatt---acgactcgagtgaaaacaatacaatatgttcct 27415205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 2729573 - 2729699
Alignment:
Q  284 gtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgact 383  Q
    |||||||||| |||| ||  |||||| ||||| || |||||||||||||||||||| |||| ||||||||| | || ||||||||| |||||||| ||||    
T  2729573 gtgatgtcttaatttttcgatttacaagatttatcactacaaaacactcaaaacacatatgaagttgcatggtttaggataaaaatgaattacaaggact 2729672  T
Q  384 cgagtgaaaacaatacaatatgttcct 410  Q
    ||||||||||||||| |||||||||||    
T  2729673 cgagtgaaaacaatataatatgttcct 2729699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 196 - 414
Target Start/End: Original strand, 8402419 - 8402635
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttg 294  Q
    ||||||||||| ||||||||||| |||||| ||||||  |||| | ||||| |||| | |||||||| | || | | | ||| |||||  ||||||||||    
T  8402419 ttgaaatgaatgttcttcactttatattttcttcaaatacctt-tcgaagaaccatagttcttcaatcttcatatcctcgatccttcacttgatgtcttg 8402517  T
Q  295 atttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaac 394  Q
    || | ||  |||||| ||||  || |||  ||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  8402518 atctatcgatttacacgattcctcgcta--aaagactcaaaacacctatggagttgcatgatttaagataaaaatgaattacaacgactcgaatgaaaac 8402615  T
Q  395 aatacaatatgttcctcaaa 414  Q
    |||||||  |||||||||||    
T  8402616 aatacaaattgttcctcaaa 8402635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 13911405 - 13911295
Alignment:
Q  304 tttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaata 403  Q
    |||||||||||| || |||||||||||| ||||||| |||| |||||||||||||| ||||||| | |||||||| || || |||||||||||||| |||    
T  13911405 tttacatgatttctcactacaaaacactaaaaacacatatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaataccata 13911306  T
Q  404 tgttcctcaaa 414  Q
    |||||||||||    
T  13911305 tgttcctcaaa 13911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 11475012 - 11474876
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||| |||| |  |||||||||||| || ||| |||| ||||||||||| |||| ||||||||||| || ||||||| | |||||||    
T  11475012 cttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaaattgaattaca 11474913  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||| |||||| ||||||| | ||||||||||    
T  11474912 acgagtcgaatgaaaataatacaaaaagttcctcaaa 11474876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 414
Target Start/End: Original strand, 1475117 - 1475365
Alignment:
Q  165 atcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat 264  Q
    ||||||| | ||| ||||||||||||| || ||||||| |||||||||||||||||||| | ||||| | |||||||  ||| |  ||| |||||||       
T  1475117 atcgttctttcgtctgaaaactcctaggaacttgaaataaattttcttcactttgtattatcttcaataaccttcta--agaactcttgatcttcaactc 1475214  T
Q  265 cacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaa-acacttatggagttgcatgatctaagat 363  Q
      || | | ||| |||||  |||||||||||||||    ||||||| |||  || |||| ||||||||||| | ||  |||||||||||||||||| |||    
T  1475215 ttcatccttgatccttcacatgatgtcttgatttgatgatttacattattcttcactacgaaacactcaaatatacccatggagttgcatgatctaggat 1475314  T
Q  364 aaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | || | ||||||||||||||||||||||| |||||||||| |||||||||    
T  1475315 ataattgaattacaacgactcgagtgaaaataatacaatatattcctcaaa 1475365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 12573456 - 12573333
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| || ||||||| ||||||   |||||||||||  || |||||||||||| |||| || || |||| ||||||||||| ||||||||| |||||||    
T  12573456 cttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaattaca 12573357  T
Q  378 acgactcgagtgaaaacaatacaa 401  Q
    ||| ||||||||||||||||||||    
T  12573356 acgtctcgagtgaaaacaatacaa 12573333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 401
Target Start/End: Complemental strand, 13549920 - 13549797
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| || ||||||| ||||||   |||||||||||  || |||||||||||| |||| || || |||| ||||||||||| ||||||||| |||||||    
T  13549920 cttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaattaca 13549821  T
Q  378 acgactcgagtgaaaacaatacaa 401  Q
    ||| ||||||||||||||||||||    
T  13549820 acgtctcgagtgaaaacaatacaa 13549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 414
Target Start/End: Original strand, 33914516 - 33914647
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| |||||||||||||| |||  |||||||||||| || |||||||||||||||||||    | |||||||||||| |  |||||   | |||||||    
T  33914516 cttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaaaaca----tagagttgcatgatttgggataacg-tgaattaca 33914610  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33914611 acgactcgagtaaaaacaatacaatatgttcctcaaa 33914647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 414
Target Start/End: Complemental strand, 12409556 - 12409488
Alignment:
Q  346 agttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||    
T  12409556 agttgcatgatccaagataaaaatgaattacaacgactcaagtgaaaataatacaatatgttcttcaaa 12409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 414
Target Start/End: Complemental strand, 28422618 - 28422483
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||| ||||||| ||||||||||  | |||||||||| || |||||||||| |||||||||  || |||||||||||| | |||||||| | |||||||    
T  28422618 cttcacgtgatgtattgatttgtcgatctacatgatttctcactacaaaacattcaaaacaccaattgagttgcatgat-ttagataaaagtgaattaca 28422520  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    | || |||| |||||||||||||| |  |||||||||    
T  28422519 atgattcgaatgaaaacaatacaaaaaattcctcaaa 28422483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 414
Target Start/End: Complemental strand, 11521296 - 11521170
Alignment:
Q  287 atgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcga 386  Q
    |||| |||||||||   |||||||||||  || |||||||||||||||||||  |||||| |||||||||||| ||||||| | |||||| || | || |    
T  11521296 atgttttgatttgttgatttacatgattcctcactacaaaacactcaaaacaactatggacttgcatgatctaggataaaactgaattac-acaaatcaa 11521198  T
Q  387 gtgaaaacaatacaatatgttcctcaaa 414  Q
    || |||| ||||||||||||||||||||    
T  11521197 gtaaaaataatacaatatgttcctcaaa 11521170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 330
Target Start/End: Complemental strand, 18066063 - 18065910
Alignment:
Q  176 gtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatcacaccttgga 275  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||| |||||||  ||| |  |||| ||||||||||| |||  |    | | ||    
T  18066063 gtttggaaactcctaggaagttgaaatgaattttcttcactttgtattttcttcaaaaaactt-tctaagaaccattggtctttaattccttgtcattga 18065965  T
Q  276 tacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacac 330  Q
    | ||| ||||||||||||||||||||  |||||||||||| |  |||||||||||    
T  18065964 tcctttatgtgatgtcttgatttgtctatttacatgatttcttactacaaaacac 18065910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 11521447 - 11521366
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||| ||||| ||||||||||||| || |||||||||||||||||| ||||||||| | ||||| | |||||||    
T  11521447 tttcgatcgttcttccgtctgaaaactcctaggaacttgaaatgaattttcttcgctttgtattatcttcaacaaccttcta 11521366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 30493259 - 30493349
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||||||||||  ||||| ||||||||| || ||||||| |||| ||||||||||||| |||||||||||||| | ||| ||||||    
T  30493259 aaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaaacaatacaaaaagtttctcaaa 30493349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 10341907 - 10341826
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    |||||||| |||||||||||||||| |   |||||| | |||||||||||||  ||||||||||||||||| ||||||||||    
T  10341907 caaaacacctatggagttgcatgattttgaataaaagtgaattacaacgactttagtgaaaacaatacaatttgttcctcaa 10341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 23007057 - 23007150
Alignment:
Q  321 tacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| |||||||||||||  |||||||||| ||||| || ||||||| | | ||| || |||||||| |||||||||||||||| |||||||||    
T  23007057 tacataacactcaaaacatctatggagttgtatgatttaggataaaagtgatttataatgactcgagggaaaacaatacaatatattcctcaaa 23007150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 414
Target Start/End: Complemental strand, 18474416 - 18474201
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatatc-acaccttggatacttcatgtgatgtcttg 294  Q
    |||||||||||||||||||||||||||| | ||||||  |||||||  ||  ||||||   |||||| |  ||| ||| ||| |||||||| ||||||||    
T  18474416 ttgaaatgaattttcttcactttgtattgtcttcaaataccttcta--agtaccattgaaattcaatctttacatcttcgatccttcatgtaatgtcttg 18474319  T
Q  295 atttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaac 394  Q
      ||  |  |||||||||||| || ||  |||| ||||||||||| |||||||||||||||| || ||||| | | |||||||| || |||| || ||||    
T  18474318 tgttcccgatttacatgatttctcactg-aaaagactcaaaacacctatggagttgcatgatttaggataacagtgaattacaatgaatcgaatg-aaac 18474221  T
Q  395 aatacaatatgttcctcaaa 414  Q
    ||||||||  ||||||||||    
T  18474220 aatacaatcagttcctcaaa 18474201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 414
Target Start/End: Original strand, 21829078 - 21829217
Alignment:
Q  274 gatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaat 373  Q
    ||||||||||||||||||||| || | |  |||||| ||||| || ||| | || || |||||| | |||| ||||| ||||| || ||||||| | |||    
T  21829078 gatacttcatgtgatgtcttgtttcgacgatttacaagatttctcacta-acaagacccaaaactcatatgaagttgtatgatttaggataaaactgaat 21829176  T
Q  374 tacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||| | |||||| ||||||| ||||||||||||    
T  21829177 tacaacgactcaaatgaaaataatacaaaatgttcctcaaa 21829217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 4775698 - 4775792
Alignment:
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||| |||| |||| |  |||| |||||||||||||| ||||| | | ||||||||||||||  |||||||||||| |||||||||| ||||    
T  4775698 ctacaaaccacttaaaatatatatgaagttgcatgatctaggataagagtgaattacaacgactcaggtgaaaacaataaaatatgttccacaaa 4775792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 413
Target Start/End: Original strand, 23908220 - 23908354
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||| ||||||||| |||| |  |||||||||||| || ||| |||  ||||||| ||| |||| | |||||| || |  |||||||   |||||||    
T  23908220 cttcatgagatgtcttgctttgccgctttacatgatttctccctagaaag-actcaaagcacctatgaaattgcattattttggataaaagggaattaca 23908318  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    |||| |||| |||||||||||||| |||||||||||    
T  23908319 acgaatcgaatgaaaacaatacaaaatgttcctcaa 23908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 26297858 - 26297795
Alignment:
Q  335 aacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaata 398  Q
    ||||| |||| ||||||||||| || ||||||| | |||||||||||||||| |||||||||||    
T  26297858 aacacatatgaagttgcatgatttaggataaaattgaattacaacgactcgaatgaaaacaata 26297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 5632536 - 5632605
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaa 401  Q
    |||||||| ||||||||||||||||  ||||||||| | ||||||||||| || | ||||||||| ||||    
T  5632536 caaaacacctatggagttgcatgattcaagataaaagtgaattacaacgaatcaaatgaaaacaacacaa 5632605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 10342069 - 10341988
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||| ||||| |  |||||||||| || ||||||||| ||||  |||||||||||| | ||||||| |||||||    
T  10342069 tttcgatcgttcttccgtctagaaactcctaggaacttgaaatgagtttttctcactttgtattgtcttcaaaaaccttcta 10341988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 18065882 - 18065846
Alignment:
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18065882 acgactcgagtgaaaacaatacaatatgtttctcaaa 18065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 26797205 - 26797311
Alignment:
Q  285 tgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactc 384  Q
    |||||||||| ||||||  |||||||||| | |||||| |||| ||||||| ||| |||| ||||||||||| || |||||||   ||||| ||||||||    
T  26797205 tgatgtcttgttttgtcgatttacatgatatctctcta-aaaagactcaaa-cacctatgaagttgcatgatttaggataaaacagaattataacgactc 26797302  T
Q  385 gagtgaaaa 393  Q
    || ||||||    
T  26797303 gaatgaaaa 26797311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 406
Target Start/End: Original strand, 4780678 - 4780764
Alignment:
Q  320 ctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgt 406  Q
    ||||||| ||||||||| |  |||| ||||| ||||| || ||||| | | |||||||| || || |||||||||||||||||||||    
T  4780678 ctacaaaccactcaaaatatctatgaagttgaatgatgtaggataagagtgaattacaatgattcaagtgaaaacaatacaatatgt 4780764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 414
Target Start/End: Original strand, 19263901 - 19263983
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    ||||||||||||| ||   | |||| || ||||||| | |||||||||||||| ||||| ||||||| |||||| ||||||||    
T  19263901 caaaacacttatgcagcatcctgatttaggataaaagtgaattacaacgactctagtgacaacaatataatatgatcctcaaa 19263983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 26387839 - 26387929
Alignment:
Q  324 aaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||| ||||||||||  |||||||||||||||| || ||||||| | |||||| ||||| | | |||||| ||||||| | ||| ||||||    
T  26387839 aaaagactcaaaacatctatggagttgcatgatttaggataaaacttaattactacgacacaaatgaaaagaatacaaaacgtttctcaaa 26387929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 19542992 - 19543037
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||||||||||||||||||||||||||| | ||||||  |||||||    
T  19542992 ttgaaatgaattttcttcactttgtattgtcttcaaataccttcta 19543037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 414
Target Start/End: Original strand, 25919465 - 25919549
Alignment:
Q  332 caaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaacaataca--atatgttcctcaaa 414  Q
    |||||||  |||||||||||||||| || ||||||| | |||||| | ||||| ||| ||||||| |||  ||||||||||||||    
T  25919465 caaaacatctatggagttgcatgatttaggataaaagtgaattacgatgactcaagtaaaaacaacacaatatatgttcctcaaa 25919549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 19263767 - 19263799
Alignment:
Q  191 gaaatttgaaatgaattttcttcactttgtatt 223  Q
    |||| ||||||||||||||||||||||||||||    
T  19263767 gaaacttgaaatgaattttcttcactttgtatt 19263799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 196 - 414
Target Start/End: Original strand, 228055 - 228269
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggatacttcatgtgatgtcttg 294  Q
    |||||||||||||||||||||||||||| | ||||||  |||||||  ||| |||||| |||||||||| || ||  | ||| ||||| |||||||||||    
T  228055 ttgaaatgaattttcttcactttgtattgtcttcaaataccttcta--agaaccattg-tcttcaatattcatacactcgatccttcacgtgatgtcttg 228151  T
Q  295 atttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattacaacgactcgagtgaaaac 394  Q
    |||||||  |||||||||||| || ||| ||||||  |||  ||||| | | |||||||||| || ||||||||| |||||||||||||||| |||||||    
T  228152 atttgtcgatttacatgatttctcactataaaacatacaa--cacttttagggttgcatgatttatgataaaaatgaattacaacgactcgaatgaaaac 228249  T
Q  395 aatacaatatgttcctcaaa 414  Q
    |||  || ||||||| ||||    
T  228250 aatttaaaatgttccacaaa 228269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 413
Target Start/End: Original strand, 26806 - 27038
Alignment:
Q  179 tgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagccattggtcttcaatat-cacaccttggata 277  Q
    ||||||||||||  || |||||| ||||||||||||||||||||| | ||||| | | |||||  ||| ||||||  ||||||| | || | | | |||     
T  26806 tgaaaactcctatgaacttgaaacgaattttcttcactttgtattgtcttcaagaactttcta--agaaccattgaacttcaattttcatatccttgatc 26903  T
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
     |||| |||||||||| |||||||  |||||||||||| || |||| ||||||||||||||| |||| ||||| ||||| || ||||||| |||||||||    
T  26904 tttcacgtgatgtcttaatttgtcgatttacatgatttctcactactaaacactcaaaacacctatgtagttgtatgatttaggataaaagtaaattaca 27003  T
Q  378 acgactcgagtgaaaacaatacaatatgttcctcaa 413  Q
    | |||| ||| |||||| ||||||| || |||||||    
T  27004 atgacttgagcgaaaac-atacaatttgctcctcaa 27038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 278 - 404
Target Start/End: Original strand, 13020 - 13146
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    ||||||||||||||||||||||||  |||||||||||  || |||||||||||||||||||| | ||||||||||| || || ||||||| | |||| ||    
T  13020 cttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaacacctgtggagttgcataatttaggataaaagtgaattcca 13119  T
Q  378 acgactcgagtgaaaacaatacaatat 404  Q
    || ||||| ||| ||| ||||||||||    
T  13120 acaactcgtgtggaaagaatacaatat 13146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 403
Target Start/End: Original strand, 8658 - 8783
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgatctaagataaaaataaattaca 377  Q
    |||||| | |||||||||||||||  |||||||||||  || |||||||||| ||||||||  ||||||||||||  || || ||||||| | ||||||     
T  8658 cttcattttatgtcttgatttgtcgatttacatgattcctcactacaaaacattcaaaacatatatggagttgcacaatttaggataaaagtgaattact 8757  T
Q  378 acgactcgagtgaaaacaatacaata 403  Q
    || | |||||||||||||||||||||    
T  8758 acaagtcgagtgaaaacaatacaata 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 8513 - 8619
Alignment:
Q  132 tgtgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaa 231  Q
    |||||||  ||||| ||||| |||| | |||||||||||| |||||||||||| |||||| || | ||||||||||| |||||  ||||||| | |||||    
T  8513 tgtgtgaattcttgcgttttcgtcccgttttcgatcgttcttccgtttgaaaattcctaggaactcgaaatgaatttccttcatcttgtattgtcttcaa 8612  T
Q  232 aagcctt 238  Q
    || ||||    
T  8613 aaacctt 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 325
Target Start/End: Original strand, 5591 - 5765
Alignment:
Q  149 ttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttctagaagagc 248  Q
    |||| ||||| |||||||||||| ||||| |||||||||||| ||| ||||| |||||||||||||||||||||||| || |||  ||||||  |||| |    
T  5591 ttttctcctgttttcgatcgttcttccgtctgaaaactcctacaaacttgaattgaattttcttcactttgtattttctttaaagaccttct--aagaac 5688  T
Q  249 cattggtcttcaat-atcacaccttggatacttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaa 325  Q
    |||| |  ||||||  ||| | | | ||| |||||||||||||||| |||||||| |||||||||||| || ||||||    
T  5689 catt-gaattcaatcttcatatcctcgatccttcatgtgatgtctttatttgtcaatttacatgatttctcactacaa 5765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 278 - 356
Target Start/End: Complemental strand, 12410 - 12332
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgat 356  Q
    ||||| ||||||||||||||||||  |||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  12410 cttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagttgcatgat 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 7927 - 7801
Alignment:
Q  134 tgtgatatcttgtgtttttgtcctgctttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaa 233  Q
    |||||| ||||||||||| |||| | |||||||| ||| ||||| ||||||||||||| || ||||||||||||||||| |||||||| | | ||||| |    
T  7927 tgtgatttcttgtgttttcgtccagttttcgatcattcttccgtctgaaaactcctaggaacttgaaatgaattttcttgactttgtactgtcttcaaca 7828  T
Q  234 gccttctagaagagccattggtcttcaat 262  Q
     ||||||  |||| ||||||| |||||||    
T  7827 accttct--aagaaccattggccttcaat 7801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 356
Target Start/End: Complemental strand, 1974 - 1896
Alignment:
Q  278 cttcatgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgcatgat 356  Q
    ||||| |||||||||||||||||   |||||| ||||| || ||||||||| |||||||||| ||||||||||||||||    
T  1974 cttcacgtgatgtcttgatttgttgatttacaggatttctcactacaaaactctcaaaacacctatggagttgcatgat 1896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 29291 - 29359
Alignment:
Q  281 catgtgatgtcttgatttgtcagtttacatgatttgtctctacaaaacactcaaaacacttatggagttgc 351  Q
    |||||||||||||||| ||||| |||||||||||| |  ||  |||| ||||||||||| |||||||||||    
T  29291 catgtgatgtcttgatatgtcaatttacatgatttttgact--aaaatactcaaaacacctatggagttgc 29359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 414
Target Start/End: Original strand, 22596 - 22630
Alignment:
Q  380 gactcgagtgaaaacaatacaatatgttcctcaaa 414  Q
    |||||||||||||||||||||||||||| ||||||    
T  22596 gactcgagtgaaaacaatacaatatgttactcaaa 22630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 22446 - 22527
Alignment:
Q  160 tttcgatcgttcctccgtttgaaaactcctagaaatttgaaatgaattttcttcactttgtattttattcaaaagccttcta 241  Q
    |||| ||||||| ||| | || ||| |||||| || |||||||||||||||||||| ||||||| | || |||| |||||||    
T  22446 tttcaatcgttcttccctctggaaaatcctaggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttcta 22527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 11566 - 11602
Alignment:
Q  196 ttgaaatgaattttcttcactttgtattttattcaaa 232  Q
    |||||||||||||||||||||||||||| | ||||||    
T  11566 ttgaaatgaattttcttcactttgtattgtcttcaaa 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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