View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1860_high_18 (Length: 362)

Name: NF1860_high_18
Description: NF1860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1860_high_18
NF1860_high_18
[»] chr3 (5 HSPs)
chr3 (21-346)||(27540024-27540349)
chr3 (24-346)||(20304856-20305178)
chr3 (129-346)||(25808572-25808790)
chr3 (129-346)||(2290381-2290598)
chr3 (206-274)||(14243096-14243164)
[»] chr6 (1 HSPs)
chr6 (21-346)||(7653897-7654217)
[»] scaffold0741 (1 HSPs)
scaffold0741 (24-346)||(5286-5608)
[»] chr7 (1 HSPs)
chr7 (24-346)||(26176428-26176750)
[»] chr5 (1 HSPs)
chr5 (24-346)||(37635583-37635905)
[»] scaffold0065 (1 HSPs)
scaffold0065 (24-346)||(41270-41592)
[»] chr4 (1 HSPs)
chr4 (134-346)||(16599892-16600109)
[»] chr1 (2 HSPs)
chr1 (47-346)||(15200469-15200758)
chr1 (130-346)||(15219524-15219740)
[»] chr2 (1 HSPs)
chr2 (157-325)||(12398296-12398464)


Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 21 - 346
Target Start/End: Original strand, 27540024 - 27540349
Alignment:
Q  21 catgtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27540024 catgtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttc 27540123  T
Q  121 tacatacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctc 220  Q
    |||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  27540124 tacagacggtgacgtcatgcccgatattctgacagtgagaacaaaaatcgggcatccattcataggccacgacaaccgggaaagcatatccttccctctc 27540223  T
Q  221 aacaacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattaca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27540224 aacaacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctatcaca 27540323  T
Q  321 agaggggtgcccaccgcacttgcaat 346  Q
    ||||||||||||||||||||||||||    
T  27540324 agaggggtgcccaccgcacttgcaat 27540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 24 - 346
Target Start/End: Original strand, 20304856 - 20305178
Alignment:
Q  24 gtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctac 123  Q
    ||||||||| ||| |||||||||||| || ||| ||  ||||| ||| ||||||| |||| |  |||||||| || ||||||| ||||||| |||||| |    
T  20304856 gtatctttcgttgcctgaacttgctttttcccatgccatattttttctttggcagttgttatgtcctttgtgatttcctttcttggatacagtcttctgc 20304955  T
Q  124 atacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaac 223  Q
    | || ||||||||||| ||||||||||| ||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  20304956 agacagtgacgtcatggccgatattctgacagtgagaacagaagtcgggcatccattcataggccacgacaaccgggaaagcatatcattccctctcaac 20305055  T
Q  224 aacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaaga 323  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||||||| || ||| ||||||||||||||| |||||| |||||||| ||||||    
T  20305056 aacaatttcatgaaaaatcttacgggaggaatccatatcaactagaattctcgcgtagtgtccaaacaatctctttgttgtcgcattgtctatcacaaga 20305155  T
Q  324 ggggtgcccaccgcacttgcaat 346  Q
    ||||| |||||||||||||||||    
T  20305156 ggggttcccaccgcacttgcaat 20305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 346
Target Start/End: Original strand, 25808572 - 25808790
Alignment:
Q  129 gtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaa 228  Q
    |||||||| || || |||||||| ||  ||||||| ||||| | || |||||| ||||||||  |||||| ||| ||| |  ||||||| || |||||||    
T  25808572 gtgacgtcgtgaccaatattctgacaatgagaacaaaaatcagtcaaccattcataggccaccgcaaccgtgaaggcaaacccttccctttcgacaacaa 25808671  T
Q  229 tttcatgaaaa-atcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaagagggg 327  Q
    | ||||||||| | ||||| |||||||||||||||||| || ||||| ||||||||| |||||||   |||||  || || |||||||| |||||||| |    
T  25808672 tctcatgaaaataacttacgggagaaatccatatcaacaagaattcttgcataatgtccaaacaaatgctttgtcgttgcattgtctatcacaagaggtg 25808771  T
Q  328 tgcccaccgcacttgcaat 346  Q
    | |||| ||| | ||||||    
T  25808772 tccccaacgctcctgcaat 25808790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 346
Target Start/End: Original strand, 2290381 - 2290598
Alignment:
Q  129 gtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaa 228  Q
    ||||| ||||| || |||||||| ||| | |||||  |||| | ||||||||| || |||||  | |||| ||| |||||  ||||||| || || |  |    
T  2290381 gtgacatcatgtccaatattctgacagtgtgaacagtaatcagacatccattcataagccacctccaccgtgaaggcatacccttccctttcgacgatga 2290480  T
Q  229 tttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaagaggggt 328  Q
    |||||||||| | ||||   ||||||||||| |||||||| ||||  ||||||||  ||||||| | ||| || || || || || || | |||||| ||    
T  2290481 tttcatgaaataacttatgtgagaaatccatgtcaactagaattcgtgcataatggccaaacaaacgcttcgacgttgcattatcaatcaaaagaggagt 2290580  T
Q  329 gcccaccgcacttgcaat 346  Q
    |||||||||| |||||||    
T  2290581 gcccaccgcaattgcaat 2290598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 14243096 - 14243164
Alignment:
Q  206 atattcttccctctcaacaacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattct 274  Q
    |||| ||||||| |||||||||||||||||||| | ||||   |  ||||||||||||||||| |||||    
T  14243096 atatccttccctttcaacaacaatttcatgaaagagcttaagtgcaaaatccatatcaactagaattct 14243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 21 - 346
Target Start/End: Complemental strand, 7654217 - 7653897
Alignment:
Q  21 catgtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttc 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7654217 catgtatctttctttgtctaaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttc 7654118  T
Q  121 tacatacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctc 220  Q
    |||||||||||| |||||||||||||||||| ||| || |||| ||||| ||||||||||| ||||||||| |||||||||||||     ||||||||||    
T  7654117 tacatacggtgatgtcatgcccgatattctgacagtgacaacagaaatccggcatccattcataggccacggcaaccgggaaagc-----cttccctctc 7654023  T
Q  221 aacaacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattaca 320  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| |||    
T  7654022 accaacaatttcatgaaaaatcttacgggagaaatccatatcaactagtattctcacataatgtccaaacaatctctttgatgtcgtgttgtctatcaca 7653923  T
Q  321 agaggggtgcccaccgcacttgcaat 346  Q
    |||||||||||||| |||||||||||    
T  7653922 agaggggtgcccactgcacttgcaat 7653897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 346
Target Start/End: Complemental strand, 5608 - 5286
Alignment:
Q  24 gtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctac 123  Q
    ||||||||| ||| |||||||||||| || ||| ||||||||| ||| |||||||||||| |  |||||||| || ||||||||||||||| |||||| |    
T  5608 gtatctttcgttgcctgaacttgctttttcccatgcgctattttttctttggcagctgttatgtcctttgtgatttcctttctaggatacagtcttctgc 5509  T
Q  124 atacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaac 223  Q
    | || ||||||||||| | ||||||||| ||| ||||||| || |||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  5508 agacagtgacgtcatggctgatattctgacagtgagaacagaagtcgggcatccattcataggccacggcaaccgggaaagcatatccttccctctcaac 5409  T
Q  224 aacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaaga 323  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||| ||||||||||||||| |||||| |||||||| ||||||    
T  5408 aacaatttcatgaaaaatcttacgggagaaatccatatcaactagaattctcgcgtagtgtccaaacaatctctttgttgtcgcattgtctatcacaaga 5309  T
Q  324 ggggtgcccaccgcacttgcaat 346  Q
    ||||| |||||||||||||||||    
T  5308 ggggttcccaccgcacttgcaat 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 346
Target Start/End: Complemental strand, 26176750 - 26176428
Alignment:
Q  24 gtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctac 123  Q
    ||||||||  ||| |||||||||||| || ||| ||||||||  ||| |||||||||||| |  |||||||| || ||||||||||||||| |||||| |    
T  26176750 gtatcttttgttgcctgaacttgctttttcccatgcgctattatttctttggcagctgttatgtcctttgtgatttcctttctaggatacagtcttctgc 26176651  T
Q  124 atacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaac 223  Q
    | || ||||||||||| ||||||||||| ||| ||||||| || ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  26176650 agacagtgacgtcatggccgatattctgacagtgagaacagaagtcgggaatccattcataggccacgacaaccgggaaagcatatccttccctgtcaac 26176551  T
Q  224 aacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaaga 323  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||||| || ||| ||||||||||||||| |||||| |||||||| ||||||    
T  26176550 aacaatttcatgaaaaatcttacgggtgaaatccatatcaactagaattctcgcgtagtgtccaaacaatctctttgttgtcgcattgtctatcacaaga 26176451  T
Q  324 ggggtgcccaccgcacttgcaat 346  Q
    ||||| |||||||||||||||||    
T  26176450 ggggttcccaccgcacttgcaat 26176428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 9e-92; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 24 - 346
Target Start/End: Original strand, 37635583 - 37635905
Alignment:
Q  24 gtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctac 123  Q
    ||||||||| ||| |||||||||||| || ||| ||| ||||| ||| |||||| ||||| |  |||||||| || ||||||||||||||| |||||| |    
T  37635583 gtatctttcgttgcctgaacttgctttttcccatgcgttattttttctttggcaactgttatgtcctttgtgatttcctttctaggatacagtcttctgc 37635682  T
Q  124 atacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaac 223  Q
    | || ||||||||||| ||||||||||| ||| ||||||| || ||| |||||||||| ||||||||| ||||| ||||| ||||| |||||||||||||    
T  37635683 agacagtgacgtcatggccgatattctgacagtgagaacagaagtcgagcatccattcataggccacggcaaccaggaaaacatatccttccctctcaac 37635782  T
Q  224 aacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaaga 323  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||| ||||||||||||||| |||||| |||||||| ||||||    
T  37635783 aacaatttcatgaaaaatcttacgggagaaatccatatcaactagaattctcgcgtagtgtccaaacaatctctttgttgtcgcattgtctatcacaaga 37635882  T
Q  324 ggggtgcccaccgcacttgcaat 346  Q
    ||||| |||||||||||||||||    
T  37635883 ggggttcccaccgcacttgcaat 37635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 24 - 346
Target Start/End: Complemental strand, 41592 - 41270
Alignment:
Q  24 gtatctttctttgtctgaacttgcttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctac 123  Q
    ||||||||| ||| |||||||||||| || ||| || |||||| ||| |||||||||||| |  |||| ||| || ||||||||||||||| |||| | |    
T  41592 gtatctttcgttgcctgaacttgctttttcccatgcactattttttctttggcagctgttatgtccttcgtgatttcctttctaggatacagtcttttgc 41493  T
Q  124 atacggtgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaac 223  Q
    | || |||||||||||  |||||||||| ||| |||| || || | |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  41492 agacagtgacgtcatggacgatattctgacagtgagagcagaagttgggcatccattcatagaccacgacaaccgggaaagcatatccttccctctcaac 41393  T
Q  224 aacaatttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaaga 323  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||| ||||||||||||||| |||||| |||||||| ||||||    
T  41392 aacaatttcatgaaaaatcttacgggagaaatccatatcaactagaattctcgcgtagtgtccaaacaatctctttgttgtcgcattgtctatcacaaga 41293  T
Q  324 ggggtgcccaccgcacttgcaat 346  Q
    ||||| |||||||||||||||||    
T  41292 ggggttcccaccgcacttgcaat 41270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 134 - 346
Target Start/End: Original strand, 16599892 - 16600109
Alignment:
Q  134 gtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaatttca 233  Q
    |||||||||||||||||| ||| ||||| | ||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  16599892 gtcatgcccgatattctgacagtgagaatagaaatccggcatccattcataggccacggcaaccgggaaagcatatccttccctctcaacaacaatttca 16599991  T
Q  234 tgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctc-----tttgatgtcgcgttgtctattacaagaggggt 328  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||     |||||||||||||||||||| |||||||||||    
T  16599992 tgaaaaatcttacgggagaaatccatatcaactagtactctcgcataatgtccaaacaaactctttaatttgatgtcgcgttgtctatcacaagaggggt 16600091  T
Q  329 gcccaccgcacttgcaat 346  Q
    |||||| |||||||||||    
T  16600092 gcccactgcacttgcaat 16600109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 47 - 346
Target Start/End: Original strand, 15200469 - 15200758
Alignment:
Q  47 cttctttccaagcgctatttgttccttggcagctgttgttacctttgtgtttacctttctaggatacaatcttctacatacggtgacgtcatgcccgata 146  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||            ||||| ||||||||||| || ||  |||| ||||||||||||    
T  15200469 cttcttcccaagcgctatttgttccttggcagctgttgtttccttt------------ctagggtacaatcttctgcagacaatgacatcatgcccgata 15200556  T
Q  147 t--tctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaatttcatgaaaaatctt 244  Q
    |  |||  ||| ||||||| |||||||||||||||| ||||||||| | ||  |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  15200557 tgatcttacagtgagaacagaaatcgggcatccatttgtaggccacaaaaattgggaaagcatatccttccctctcgacaacaatttcgtgaaaaatctt 15200656  T
Q  245 acaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaagaggggtgcccaccgcacttgca 344  Q
    || |||||| |||||||| ||||| ||||| |||||||||  ||||| || |||||| ||||| ||||| || |||||||||||||||||||||||||||    
T  15200657 acgggagaagtccatatcgactagaattcttgcataatgtctaaacagtcgctttgacgtcgcattgtcgatcacaagaggggtgcccaccgcacttgca 15200756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 130 - 346
Target Start/End: Original strand, 15219524 - 15219740
Alignment:
Q  130 tgacgtcatgcccgatattctgtcagggagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaat 229  Q
    |||| ||||||||||||||||  ||| ||||||| |||||||||||||||| ||||||||| | || ||||||||||||| |||||||||| ||||||||    
T  15219524 tgacatcatgcccgatattcttacagtgagaacagaaatcgggcatccatttgtaggccacaaaaatcgggaaagcatatccttccctctcgacaacaat 15219623  T
Q  230 ttcatgaaaaatcttacaggagaaatccatatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaagaggggtg 329  Q
    ||||||||||||||||| |||||| |||||||| ||||| ||||| ||||||||| |||| | || |||||| | ||  ||||| || ||||||||||||    
T  15219624 ttcatgaaaaatcttacgggagaagtccatatcgactagaattcttgcataatgtccaaatagtcgctttgacgacgaattgtcgatcacaagaggggtg 15219723  T
Q  330 cccaccgcacttgcaat 346  Q
    |||||||||||||||||    
T  15219724 cccaccgcacttgcaat 15219740  T

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Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 12398296 - 12398464
Alignment:
Q  157 gagaacataaatcgggcatccattcgtaggccacgacaaccgggaaagcatattcttccctctcaacaacaatttcatgaaaaatcttacaggagaaatc 256  Q
    ||||||| ||||| |||| |||||| ||||||||  |||||| ||| ||| |  ||||| | |||||||||||||||||||| | ||||| |||||||||    
T  12398296 gagaacagaaatcaggcaaccattcataggccaccgcaaccgtgaaggcaaacccttccttttcaacaacaatttcatgaaataacttacgggagaaatc 12398395  T
Q  257 catatcaactagtattctcgcataatgttcaaacaatctctttgatgtcgcgttgtctattacaagagg 325  Q
    ||||||||| || ||||| ||||||||| ||||||| | |||||  |||||||||||||| ||||||||    
T  12398396 catatcaacaagaattcttgcataatgtccaaacaaacgctttgtcgtcgcgttgtctatcacaagagg 12398464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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