View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1860_high_33 (Length: 288)
Name: NF1860_high_33
Description: NF1860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1860_high_33 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 6134968 - 6134698
Alignment:
| Q |
1 |
tctgttttttaaatactttggcaaactgtgaacttcattggctatgagagatcagagtgaaagtcttttcaggttagtctccattccctctctgaatagt |
100 |
Q |
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| T |
6134968 |
tctgttttttaaatactttggcaaactgtgaacttcattggctatgagagatcagagtgaaagtcttttcaggttagtctccattccctctctgaatagt |
6134869 |
T |
|
| Q |
101 |
tagtgtatgcagaaaagtgatttttgtgtattatttattagttctaattttggagaattgataattaatgttaatgtaacgagtctaatatcaaatgata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6134868 |
tagtgtatgcagaaaagtgatttttgtgtattatttattaattctaattttggagaattgataattaatgttaatgtaacgagtctaatatcaaatgata |
6134769 |
T |
|
| Q |
201 |
ttgaaaagcaacacttccagactgagttggaaggatcagaattattatagaaataaaaagagaaggaagaa |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6134768 |
ttgaaaagcaacacttccagactgagttggaaggatcagaattattatagaaataaaaagagaaggaagaa |
6134698 |
T |
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