View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1860_low_17 (Length: 363)

Name: NF1860_low_17
Description: NF1860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1860_low_17
NF1860_low_17
[»] chr5 (53 HSPs)
chr5 (24-337)||(4160465-4160777)
chr5 (17-250)||(40147086-40147321)
chr5 (17-250)||(27015357-27015591)
chr5 (17-250)||(38746830-38747065)
chr5 (17-250)||(5057872-5058105)
chr5 (17-250)||(213294-213525)
chr5 (17-250)||(28278141-28278376)
chr5 (36-250)||(316609-316822)
chr5 (17-170)||(27637802-27637959)
chr5 (31-171)||(16641128-16641269)
chr5 (261-330)||(27637610-27637679)
chr5 (39-98)||(33906291-33906350)
chr5 (35-148)||(14689622-14689735)
chr5 (51-236)||(35616030-35616215)
chr5 (262-303)||(5058148-5058189)
chr5 (262-303)||(13239854-13239895)
chr5 (262-303)||(16640964-16641005)
chr5 (262-303)||(18441672-18441713)
chr5 (262-303)||(25412863-25412904)
chr5 (262-303)||(28278419-28278460)
chr5 (262-303)||(37439244-37439285)
chr5 (262-303)||(40147364-40147405)
chr5 (262-322)||(13343163-13343223)
chr5 (266-325)||(316870-316929)
chr5 (62-250)||(10700756-10700946)
chr5 (262-303)||(213568-213609)
chr5 (262-303)||(9789248-9789289)
chr5 (262-303)||(16409578-16409619)
chr5 (262-303)||(26170865-26170906)
chr5 (262-303)||(26177985-26178026)
chr5 (262-303)||(29720467-29720508)
chr5 (262-330)||(16452183-16452250)
chr5 (17-129)||(21205883-21205995)
chr5 (262-325)||(33906032-33906095)
chr5 (196-250)||(39468657-39468712)
chr5 (197-250)||(13488209-13488263)
chr5 (205-247)||(22097879-22097921)
chr5 (205-250)||(3325928-3325973)
chr5 (262-303)||(10593361-10593402)
chr5 (205-250)||(13239766-13239811)
chr5 (262-303)||(13488306-13488347)
chr5 (262-303)||(19806466-19806507)
chr5 (262-303)||(25078224-25078265)
chr5 (262-303)||(25136193-25136234)
chr5 (262-303)||(28750679-28750720)
chr5 (262-303)||(29722627-29722668)
chr5 (262-303)||(29751184-29751225)
chr5 (262-303)||(30182691-30182732)
chr5 (262-303)||(30682946-30682987)
chr5 (262-303)||(32636927-32636968)
chr5 (262-303)||(36074067-36074108)
chr5 (262-303)||(40380194-40380235)
chr5 (262-303)||(40382405-40382446)
[»] chr3 (73 HSPs)
chr3 (17-250)||(46860296-46860534)
chr3 (17-171)||(34491038-34491194)
chr3 (17-170)||(6095787-6095942)
chr3 (17-250)||(4569776-4570012)
chr3 (17-160)||(40913164-40913309)
chr3 (17-250)||(30235950-30236185)
chr3 (17-250)||(54593530-54593764)
chr3 (17-250)||(5433984-5434220)
chr3 (17-170)||(36018676-36018831)
chr3 (21-250)||(49199578-49199810)
chr3 (17-170)||(55302153-55302308)
chr3 (17-170)||(41819712-41819865)
chr3 (17-117)||(43403975-43404076)
chr3 (50-250)||(26323182-26323385)
chr3 (17-117)||(43402032-43402133)
chr3 (17-144)||(1683313-1683440)
chr3 (261-333)||(41819517-41819589)
chr3 (17-147)||(47304077-47304208)
chr3 (36-118)||(34795713-34795795)
chr3 (262-337)||(55301962-55302037)
chr3 (36-247)||(20937501-20937713)
chr3 (262-303)||(45095266-45095307)
chr3 (262-322)||(43403749-43403809)
chr3 (262-309)||(46860577-46860624)
chr3 (262-303)||(6095623-6095664)
chr3 (262-303)||(7762368-7762409)
chr3 (262-303)||(9581385-9581426)
chr3 (262-303)||(34491315-34491356)
chr3 (262-322)||(43401806-43401866)
chr3 (262-322)||(49199474-49199534)
chr3 (262-322)||(54593807-54593866)
chr3 (265-308)||(5433901-5433944)
chr3 (262-303)||(7764567-7764608)
chr3 (262-303)||(7780028-7780069)
chr3 (262-303)||(19683913-19683954)
chr3 (262-303)||(27305734-27305775)
chr3 (262-303)||(37408561-37408602)
chr3 (262-322)||(9636131-9636191)
chr3 (262-330)||(33191934-33192001)
chr3 (262-301)||(4570055-4570094)
chr3 (196-250)||(5236564-5236619)
chr3 (262-301)||(16499132-16499171)
chr3 (40-247)||(35138817-35139026)
chr3 (17-87)||(36796236-36796307)
chr3 (66-250)||(39127421-39127607)
chr3 (196-242)||(45095169-45095215)
chr3 (262-303)||(760950-760991)
chr3 (262-303)||(801195-801236)
chr3 (262-303)||(2075099-2075140)
chr3 (262-303)||(3617553-3617594)
chr3 (262-303)||(4600768-4600809)
chr3 (262-303)||(5258168-5258209)
chr3 (205-250)||(7762280-7762325)
chr3 (262-303)||(23197963-23198004)
chr3 (262-303)||(23200162-23200203)
chr3 (212-249)||(25491077-25491114)
chr3 (262-303)||(25637530-25637571)
chr3 (262-295)||(29682462-29682495)
chr3 (262-303)||(29810971-29811012)
chr3 (261-322)||(29813165-29813225)
chr3 (262-303)||(30236228-30236269)
chr3 (103-250)||(31340309-31340457)
chr3 (262-303)||(40735486-40735527)
chr3 (262-303)||(40913396-40913437)
chr3 (262-303)||(44331648-44331689)
chr3 (262-303)||(45283089-45283130)
chr3 (262-303)||(46173460-46173501)
chr3 (262-303)||(47304354-47304395)
chr3 (211-247)||(8166568-8166604)
chr3 (262-322)||(10209278-10209338)
chr3 (210-250)||(24635277-24635317)
chr3 (210-250)||(29813083-29813123)
chr3 (210-250)||(51398834-51398874)
[»] chr1 (75 HSPs)
chr1 (17-250)||(11348523-11348758)
chr1 (17-250)||(37033181-37033416)
chr1 (17-160)||(34603401-34603545)
chr1 (17-250)||(37879019-37879254)
chr1 (19-250)||(29136074-29136307)
chr1 (17-250)||(13547197-13547432)
chr1 (27-247)||(41135656-41135877)
chr1 (17-250)||(42298083-42298318)
chr1 (17-250)||(47114996-47115231)
chr1 (17-231)||(13549127-13549343)
chr1 (17-130)||(34602569-34602682)
chr1 (17-160)||(7482430-7482573)
chr1 (17-250)||(37168122-37168357)
chr1 (17-170)||(28242213-28242368)
chr1 (17-250)||(6808272-6808512)
chr1 (17-160)||(193436-193581)
chr1 (17-250)||(47255448-47255682)
chr1 (17-170)||(31925895-31926049)
chr1 (17-155)||(19752510-19752650)
chr1 (17-144)||(19754316-19754448)
chr1 (27-148)||(22079158-22079278)
chr1 (261-322)||(28242406-28242467)
chr1 (262-322)||(47255345-47255405)
chr1 (262-322)||(47115275-47115335)
chr1 (262-303)||(31925731-31925772)
chr1 (162-250)||(12318631-12318719)
chr1 (40-116)||(12318725-12318801)
chr1 (262-322)||(42297980-42298040)
chr1 (263-325)||(2926613-2926675)
chr1 (262-303)||(8550811-8550852)
chr1 (262-303)||(11348801-11348842)
chr1 (262-303)||(13547113-13547154)
chr1 (262-303)||(13549024-13549065)
chr1 (262-303)||(37168401-37168442)
chr1 (262-330)||(9109416-9109484)
chr1 (266-330)||(22079424-22079488)
chr1 (29-250)||(25651922-25652146)
chr1 (262-309)||(5460009-5460056)
chr1 (265-303)||(29136353-29136391)
chr1 (262-303)||(3189433-3189474)
chr1 (262-303)||(3198250-3198291)
chr1 (262-303)||(3207089-3207130)
chr1 (262-303)||(13316376-13316417)
chr1 (262-303)||(20762775-20762816)
chr1 (262-303)||(46065021-46065062)
chr1 (28-96)||(9109665-9109733)
chr1 (262-322)||(37033077-37033137)
chr1 (262-301)||(13659362-13659401)
chr1 (196-250)||(28220334-28220389)
chr1 (205-243)||(2926523-2926561)
chr1 (261-330)||(6808555-6808624)
chr1 (262-304)||(13137999-13138041)
chr1 (265-303)||(34603683-34603721)
chr1 (262-300)||(51765500-51765538)
chr1 (262-303)||(193714-193755)
chr1 (262-303)||(834191-834232)
chr1 (262-303)||(1833625-1833666)
chr1 (262-303)||(7482254-7482295)
chr1 (194-247)||(9109531-9109584)
chr1 (262-303)||(9987304-9987345)
chr1 (262-303)||(20622261-20622302)
chr1 (262-303)||(28220250-28220291)
chr1 (262-303)||(28265578-28265619)
chr1 (205-250)||(33775924-33775969)
chr1 (262-303)||(40282480-40282521)
chr1 (262-303)||(44203735-44203776)
chr1 (262-303)||(44455263-44455304)
chr1 (262-303)||(50169234-50169275)
chr1 (262-330)||(2262971-2263039)
chr1 (210-250)||(3156885-3156925)
chr1 (41-144)||(3331403-3331505)
chr1 (196-231)||(8871175-8871211)
chr1 (263-303)||(37282715-37282755)
chr1 (262-298)||(37876795-37876831)
chr1 (210-250)||(49918370-49918410)
[»] chr6 (45 HSPs)
chr6 (17-250)||(21593491-21593724)
chr6 (17-250)||(5043452-5043687)
chr6 (17-160)||(603278-603423)
chr6 (17-250)||(17762814-17763050)
chr6 (17-250)||(2973047-2973282)
chr6 (17-170)||(3808897-3809051)
chr6 (29-250)||(26830231-26830455)
chr6 (81-250)||(25073457-25073628)
chr6 (17-170)||(22425016-22425168)
chr6 (17-81)||(17757909-17757973)
chr6 (261-320)||(26800689-26800748)
chr6 (261-322)||(22424831-22424892)
chr6 (262-322)||(5043730-5043790)
chr6 (262-322)||(5406205-5406265)
chr6 (262-322)||(5410530-5410590)
chr6 (262-304)||(3808731-3808773)
chr6 (262-303)||(2972963-2973004)
chr6 (262-303)||(5409093-5409134)
chr6 (262-303)||(5413418-5413459)
chr6 (30-173)||(5740975-5741120)
chr6 (262-303)||(21589034-21589075)
chr6 (262-303)||(21593767-21593808)
chr6 (262-325)||(9572694-9572757)
chr6 (205-247)||(186729-186771)
chr6 (262-300)||(31404702-31404740)
chr6 (262-303)||(2171556-2171597)
chr6 (262-303)||(6097475-6097516)
chr6 (262-303)||(16452353-16452394)
chr6 (262-303)||(16569125-16569166)
chr6 (262-299)||(17758126-17758163)
chr6 (262-303)||(26830147-26830188)
chr6 (262-303)||(28137432-28137473)
chr6 (262-303)||(30834560-30834601)
chr6 (196-242)||(5406316-5406362)
chr6 (196-242)||(5410641-5410687)
chr6 (196-242)||(31404791-31404837)
chr6 (261-303)||(33211209-33211251)
chr6 (262-303)||(412205-412246)
chr6 (262-303)||(3072783-3072824)
chr6 (262-291)||(9183067-9183096)
chr6 (262-299)||(17763093-17763130)
chr6 (262-303)||(25421409-25421450)
chr6 (262-303)||(26954310-26954351)
chr6 (265-298)||(33160381-33160414)
chr6 (56-84)||(25073048-25073076)
[»] chr4 (82 HSPs)
chr4 (17-250)||(379204-379440)
chr4 (17-166)||(33989687-33989837)
chr4 (17-250)||(12073217-12073452)
chr4 (17-170)||(50674034-50674189)
chr4 (17-250)||(55085473-55085708)
chr4 (17-250)||(54882845-54883080)
chr4 (17-160)||(41964240-41964384)
chr4 (17-147)||(26364090-26364222)
chr4 (17-155)||(35662267-35662405)
chr4 (17-250)||(8665232-8665468)
chr4 (17-170)||(6655781-6655936)
chr4 (19-250)||(46703327-46703560)
chr4 (37-246)||(32091324-32091534)
chr4 (17-170)||(50262886-50263041)
chr4 (17-250)||(12119364-12119599)
chr4 (54-250)||(2209575-2209773)
chr4 (17-87)||(40630809-40630879)
chr4 (45-241)||(41961264-41961468)
chr4 (17-170)||(8647963-8648118)
chr4 (17-129)||(34112437-34112549)
chr4 (17-129)||(33089724-33089825)
chr4 (19-170)||(26699634-26699786)
chr4 (100-250)||(40632354-40632505)
chr4 (262-320)||(379483-379541)
chr4 (261-322)||(46703603-46703664)
chr4 (27-119)||(3785926-3786017)
chr4 (50-154)||(27417165-27417271)
chr4 (262-322)||(2209817-2209877)
chr4 (262-318)||(12073495-12073551)
chr4 (261-337)||(26699432-26699508)
chr4 (262-322)||(48143146-48143206)
chr4 (36-119)||(22882994-22883077)
chr4 (36-119)||(22934658-22934741)
chr4 (262-309)||(33089982-33090029)
chr4 (27-121)||(35370576-35370669)
chr4 (139-248)||(44967939-44968049)
chr4 (262-303)||(8665511-8665552)
chr4 (261-318)||(12119642-12119698)
chr4 (262-303)||(29999830-29999871)
chr4 (262-303)||(41639529-41639570)
chr4 (262-303)||(41964519-41964560)
chr4 (262-303)||(50673871-50673912)
chr4 (262-303)||(56178661-56178702)
chr4 (266-322)||(8648246-8648301)
chr4 (262-330)||(33989948-33990016)
chr4 (262-330)||(40632548-40632615)
chr4 (262-322)||(50262706-50262766)
chr4 (134-250)||(6677412-6677529)
chr4 (262-300)||(52095389-52095427)
chr4 (262-303)||(6656059-6656100)
chr4 (262-303)||(13992317-13992358)
chr4 (262-303)||(35662544-35662585)
chr4 (262-330)||(6542177-6542244)
chr4 (203-247)||(34788886-34788930)
chr4 (196-250)||(9927566-9927621)
chr4 (196-250)||(26364241-26364296)
chr4 (196-250)||(34570522-34570577)
chr4 (36-119)||(35369681-35369763)
chr4 (196-250)||(54200014-54200069)
chr4 (212-250)||(33089900-33089938)
chr4 (262-303)||(5370107-5370148)
chr4 (262-303)||(7125005-7125046)
chr4 (262-303)||(8393497-8393538)
chr4 (262-303)||(8395706-8395747)
chr4 (262-303)||(9927482-9927523)
chr4 (262-303)||(12739574-12739615)
chr4 (262-303)||(26175660-26175701)
chr4 (262-303)||(26364339-26364380)
chr4 (262-303)||(27416989-27417030)
chr4 (205-242)||(27994835-27994871)
chr4 (262-303)||(31495340-31495381)
chr4 (205-246)||(44570478-44570519)
chr4 (262-303)||(47038435-47038476)
chr4 (205-250)||(48143058-48143103)
chr4 (262-303)||(48893662-48893703)
chr4 (262-303)||(52467378-52467419)
chr4 (205-250)||(56178745-56178790)
chr4 (262-298)||(3913551-3913586)
chr4 (210-250)||(5349930-5349970)
chr4 (261-289)||(37229759-37229787)
chr4 (21-85)||(46569821-46569885)
chr4 (210-250)||(52467462-52467502)
[»] chr8 (46 HSPs)
chr8 (17-250)||(44353617-44353853)
chr8 (17-231)||(40328604-40328820)
chr8 (17-250)||(4283349-4283584)
chr8 (19-250)||(11383813-11384045)
chr8 (17-170)||(40221570-40221725)
chr8 (21-250)||(42435099-42435330)
chr8 (37-250)||(18655246-18655460)
chr8 (27-119)||(40585561-40585652)
chr8 (262-333)||(7597718-7597789)
chr8 (262-303)||(34254355-34254396)
chr8 (262-303)||(34256531-34256572)
chr8 (262-303)||(4283627-4283668)
chr8 (28-81)||(9633816-9633869)
chr8 (262-303)||(42498297-42498338)
chr8 (262-322)||(19945364-19945424)
chr8 (36-116)||(33655548-33655628)
chr8 (262-321)||(18141923-18141981)
chr8 (262-301)||(40328883-40328922)
chr8 (262-303)||(2627839-2627880)
chr8 (262-303)||(17982756-17982797)
chr8 (261-330)||(29796317-29796386)
chr8 (262-303)||(42435015-42435056)
chr8 (262-303)||(44303958-44303999)
chr8 (210-250)||(4162517-4162557)
chr8 (190-249)||(29796431-29796491)
chr8 (196-250)||(15212791-15212846)
chr8 (204-250)||(11137039-11137085)
chr8 (262-312)||(32902188-32902238)
chr8 (204-245)||(41266982-41267024)
chr8 (261-303)||(41366639-41366680)
chr8 (262-303)||(1746243-1746284)
chr8 (262-303)||(3439606-3439647)
chr8 (262-330)||(3772295-3772362)
chr8 (262-303)||(4743238-4743279)
chr8 (262-303)||(10930223-10930264)
chr8 (266-303)||(12702658-12702695)
chr8 (205-250)||(12702742-12702787)
chr8 (262-303)||(18655503-18655544)
chr8 (262-303)||(31218360-31218401)
chr8 (262-303)||(33352253-33352294)
chr8 (262-303)||(40221848-40221889)
chr8 (262-303)||(40321183-40321224)
chr8 (205-250)||(42498209-42498254)
chr8 (262-303)||(43036526-43036567)
chr8 (262-330)||(11711997-11712065)
chr8 (162-250)||(32902282-32902370)
[»] chr7 (66 HSPs)
chr7 (17-250)||(2361080-2361314)
chr7 (17-250)||(34310824-34311059)
chr7 (17-250)||(6431796-6432031)
chr7 (17-170)||(4512578-4512733)
chr7 (19-250)||(48599442-48599675)
chr7 (17-160)||(2390107-2390252)
chr7 (17-160)||(6360110-6360255)
chr7 (17-155)||(29608561-29608701)
chr7 (17-250)||(4508814-4509049)
chr7 (17-170)||(4510736-4510891)
chr7 (21-160)||(3258825-3258964)
chr7 (19-155)||(22328601-22328739)
chr7 (17-250)||(22269798-22270033)
chr7 (36-248)||(1360263-1360478)
chr7 (17-231)||(8359444-8359661)
chr7 (262-330)||(22328387-22328455)
chr7 (262-322)||(8359321-8359381)
chr7 (262-322)||(3259098-3259157)
chr7 (262-325)||(18396421-18396484)
chr7 (203-246)||(43363586-43363629)
chr7 (261-303)||(2390384-2390426)
chr7 (262-303)||(22270076-22270117)
chr7 (262-303)||(23555143-23555184)
chr7 (262-303)||(29991156-29991197)
chr7 (262-303)||(32358078-32358119)
chr7 (262-303)||(34310740-34310781)
chr7 (37-107)||(43363667-43363737)
chr7 (262-303)||(496007-496048)
chr7 (32-97)||(5116475-5116540)
chr7 (150-247)||(5116564-5116661)
chr7 (262-303)||(6432074-6432115)
chr7 (262-303)||(14379885-14379926)
chr7 (262-303)||(19502281-19502322)
chr7 (205-250)||(23555055-23555100)
chr7 (262-303)||(23565085-23565126)
chr7 (262-303)||(25615956-25615997)
chr7 (262-303)||(25766984-25767025)
chr7 (262-303)||(35854017-35854058)
chr7 (262-303)||(39731472-39731513)
chr7 (196-250)||(4586166-4586221)
chr7 (266-325)||(26639432-26639491)
chr7 (196-250)||(27347822-27347877)
chr7 (196-250)||(48489436-48489491)
chr7 (262-325)||(48489534-48489596)
chr7 (196-250)||(48491584-48491639)
chr7 (262-324)||(1560669-1560731)
chr7 (262-296)||(48599365-48599399)
chr7 (132-225)||(3904751-3904844)
chr7 (262-303)||(4510572-4510613)
chr7 (262-303)||(4512414-4512455)
chr7 (262-303)||(8153445-8153486)
chr7 (262-303)||(14069857-14069898)
chr7 (262-303)||(18388784-18388825)
chr7 (262-303)||(18392220-18392261)
chr7 (262-303)||(20344000-20344041)
chr7 (262-303)||(24525526-24525567)
chr7 (204-245)||(26639334-26639375)
chr7 (262-303)||(29608840-29608881)
chr7 (262-303)||(30024756-30024797)
chr7 (262-303)||(32060346-32060387)
chr7 (262-303)||(41317458-41317499)
chr7 (262-303)||(48491682-48491723)
chr7 (50-110)||(22552683-22552743)
chr7 (262-330)||(36574514-36574580)
chr7 (210-250)||(43864264-43864304)
chr7 (210-250)||(47674051-47674091)
[»] chr2 (46 HSPs)
chr2 (17-250)||(1631840-1632075)
chr2 (17-246)||(35446996-35447227)
chr2 (17-250)||(45726754-45726989)
chr2 (17-170)||(42288298-42288453)
chr2 (30-250)||(17450429-17450651)
chr2 (262-333)||(33648275-33648346)
chr2 (17-155)||(24397883-24398018)
chr2 (264-328)||(28672036-28672100)
chr2 (262-301)||(5723282-5723321)
chr2 (262-337)||(45727032-45727106)
chr2 (262-303)||(2334442-2334483)
chr2 (262-303)||(6595030-6595071)
chr2 (21-250)||(33647999-33648231)
chr2 (262-303)||(36988100-36988141)
chr2 (193-250)||(42261594-42261651)
chr2 (262-330)||(17490146-17490213)
chr2 (262-337)||(1631723-1631797)
chr2 (283-325)||(16388519-16388561)
chr2 (266-320)||(24398165-24398219)
chr2 (262-303)||(4484354-4484395)
chr2 (262-303)||(4503157-4503198)
chr2 (205-250)||(6595114-6595159)
chr2 (262-303)||(7451221-7451262)
chr2 (262-303)||(30833449-30833490)
chr2 (262-303)||(35446908-35446949)
chr2 (262-303)||(36318033-36318074)
chr2 (262-303)||(45099857-45099898)
chr2 (17-48)||(7451125-7451156)
chr2 (167-250)||(30218153-30218236)
chr2 (36-119)||(43730992-43731074)
chr2 (36-126)||(30218269-30218358)
chr2 (262-303)||(723768-723809)
chr2 (262-303)||(6266794-6266835)
chr2 (262-303)||(12647410-12647451)
chr2 (262-303)||(13656056-13656097)
chr2 (262-303)||(14633849-14633890)
chr2 (262-303)||(17057393-17057434)
chr2 (262-303)||(17085376-17085417)
chr2 (262-303)||(17450681-17450721)
chr2 (262-303)||(26353287-26353328)
chr2 (262-303)||(33162474-33162515)
chr2 (262-303)||(34139794-34139835)
chr2 (262-303)||(39284939-39284980)
chr2 (205-250)||(41446154-41446199)
chr2 (205-250)||(41454249-41454294)
chr2 (262-303)||(42412121-42412161)
[»] scaffold0466 (2 HSPs)
scaffold0466 (17-250)||(7153-7387)
scaffold0466 (262-301)||(7430-7469)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-250)||(80391-80626)
[»] scaffold0286 (2 HSPs)
scaffold0286 (17-242)||(11383-11609)
scaffold0286 (262-303)||(11660-11701)
[»] scaffold0176 (2 HSPs)
scaffold0176 (17-250)||(18111-18344)
scaffold0176 (262-303)||(18028-18069)
[»] scaffold0219 (1 HSPs)
scaffold0219 (262-333)||(27436-27507)
[»] scaffold0002 (2 HSPs)
scaffold0002 (193-250)||(490429-490486)
scaffold0002 (262-303)||(434636-434677)
[»] scaffold0236 (1 HSPs)
scaffold0236 (262-330)||(10592-10659)
[»] scaffold0197 (1 HSPs)
scaffold0197 (28-87)||(1679-1737)
[»] scaffold0016 (1 HSPs)
scaffold0016 (262-301)||(114705-114744)
[»] scaffold1519 (1 HSPs)
scaffold1519 (262-303)||(1018-1059)
[»] scaffold0674 (1 HSPs)
scaffold0674 (262-303)||(3750-3791)
[»] scaffold0491 (2 HSPs)
scaffold0491 (262-303)||(8759-8800)
scaffold0491 (262-303)||(11185-11226)
[»] scaffold0006 (1 HSPs)
scaffold0006 (262-301)||(149123-149162)
[»] scaffold0565 (1 HSPs)
scaffold0565 (262-303)||(2628-2669)


Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 24 - 337
Target Start/End: Original strand, 4160465 - 4160777
Alignment:
Q  24 agtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggt 123  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  4160465 agtggagagtcatttgtgagcaactagggtgaatcttgggaaaccaaaagagaagatccttaggtaattaaaggctaagggttggttctcttttgggggt 4160564  T
Q  124 tagattcagagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggt 223  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4160565 tagattcagagttgagaaacaattgtaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggt 4160664  T
Q  224 ttgttcttggagaacttgttgaagctannnnnnnnngtatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggta 323  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  4160665 ttgttcttggagaacttgttgaagct-tttttttttgtatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggta 4160763  T
Q  324 aatatttattagtg 337  Q
    ||||||||||||||    
T  4160764 aatatttattagtg 4160777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 40147086 - 40147321
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  40147086 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 40147185  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagt-gaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  |||| |||||| |||| ||| ||| ||||  |  |||||| ||||||| |||    
T  40147186 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtggaaatc-atgagtgtcttgttcat-tggtgagattgggaaaatgggt 40147283  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||||| | || |||||||||||||    
T  40147284 agaaattagggttgttcttcgtgagcttgttgaagcta 40147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 27015357 - 27015591
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  27015357 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 27015456  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||  ||||  ||||||||   |||| || |||| ||||  |  |||||| ||||||| ||||    
T  27015457 ttgggggttagattctagagttgggaaacaattgtaaacatcttgggagagtgaaaatcatgagtg-tttggtcat-tggtgagattgggaaaataggta 27015554  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | ||||||||||||||||    
T  27015555 gaaattagggttgttctttgtgaacttgttgaagcta 27015591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 38746830 - 38747065
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatcctta-ggtaattaaaggccaagggttggttctctt 115  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||  | ||| |||||| ||||||||||||||||    
T  38746830 acacgtgagtggagagtcatttgcgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttattgaaatcaaaggctaagggttggttctctt 38746929  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| | | ||| |||| | | |||||| ||||||| ||||    
T  38746930 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtatcttgttcatta-atgagattgggaaaatgggta 38747028  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  38747029 gaaattagggttgttctttgtgagcttgttgaagcta 38747065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 5057872 - 5058105
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||   ||| |||||| ||||||||||||||||    
T  5057872 acacatgagtggagagtcatttgtgagcaacttgggcgagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctctt 5057971  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| |||||||  ||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  5057972 ttgggggttagattctagagttggaaaacaattgtaaacaccttggaagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 5058070  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||  | || |||||||||||||    
T  5058071 gaaattagggttgttct--gtgagcttgttgaagcta 5058105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 213294 - 213525
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| |||    |||||||||    
T  213294 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaag----ggttctctt 213389  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  213390 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 213488  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||| ||||||    
T  213489 gaaattagggttgttctttgtgagcttgttaaagcta 213525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 28278141 - 28278376
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||| |  |||||||||||| |||||||||||| |||| |||||||||||||  |||| | ||| ||| || ||||||||| ||||||    
T  28278141 acacatgagtggagagactattgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagattgttagtgaaatcaaatgctaagggttggctctctt 28278240  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    || | |||||||||| ||||||| |||||||||| |||||||||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  28278241 ttaggggttagattctagagttgggaaacaattgtaaacacattgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 28278339  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| | |||||||| | || |||||||||||||    
T  28278340 gaaattatggttgttctttgtgagcttgttgaagcta 28278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 250
Target Start/End: Original strand, 316609 - 316822
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttaga-ttcagag 134  Q
    ||||||||||||| || ||| |||||||| |||||||||||| ||||| ||| ||| |||||| |||||||||||||||||||| ||||||| || | ||    
T  316609 tttgtgagcaacttgg-tgaatcttgggagaccaaaagagaaaatcct-aggaaatcaaaggctaagggttggttctcttttgggggttagattttaaag 316706  T
Q  135 ttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttgga 234  Q
    |||  |||||||||  || |  | || |||||||||||| ||  | | ||| | | | ||  |||||  ||||| |||||||||||||||||||||||||    
T  316707 ttggaaaacaattgggaaaaactcgggtgagtgaaatcattgggtctcttgtttaggggaaaagattgagaaaaaggtagaaattaggtttgttcttgga 316806  T
Q  235 gaacttgttgaagcta 250  Q
    || |||||||||||||    
T  316807 gagcttgttgaagcta 316822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 27637959 - 27637802
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaa--gagaagatccttag-gtaattaaaggccaagggttggttctc 113  Q
    ||||||||||| |||||| ||| ||||||||| |||||||||||| ||||||||||  |||||||||||||| | ||| |||| | ||  ||| ||||||    
T  27637959 acacatgagtgaagagtcttttatgagcaacttgggtgagtcttgtgaaaccaaaagagagaagatccttagtgaaatcaaagactaaaagtttgttctc 27637860  T
Q  114 ttttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||||| |||||||| | ||||||| ||||||||||  ||||| ||||  ||||||||    
T  27637859 ttttgggggttagatgctagagttgggaaacaattgtgaacaccttggaagagtgaaa 27637802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 16641269 - 16641128
Alignment:
Q  31 agtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc 130  Q
    ||||| |||||| |||||  ||||||||||| |||||||||||||||||| ||||   ||| |||||| || ||||||||||||||||| | ||||||||    
T  16641269 agtcaattgtgaacaactttggtgagtcttgtgaaaccaaaagagaagatacttaaaaaatcaaaggctaaaggttggttctcttttggggattagattc 16641170  T
Q  131 -agagttgagaaacaattgcaaacacattggttgagtgaaat 171  Q
     ||||||| | |||| ||| |||||| |||  ||||||||||    
T  16641169 tagagttggggaacatttgtaaacaccttgagtgagtgaaat 16641128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 27637679 - 27637610
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||| |||||||    
T  27637679 tatagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaatattt 27637610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 33906350 - 33906291
Alignment:
Q  39 gtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggc 98  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  33906350 gtgagcaacttgggtgagtcttgggaaaccaaaagagaagatccttaggaaatcaaaggc 33906291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 14689735 - 14689622
Alignment:
Q  35 atttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-aga 133  Q
    ||||||||||||||  | | |||||||||| ||||||||| |||||||||||  ||| |||||| | |||||||||||||||||| || ||||||| |||    
T  14689735 atttgtgagcaacttagataagtcttgggacaccaaaagaaaagatccttagaaaatcaaaggctaggggttggttctcttttgg-ggatagattctaga 14689637  T
Q  134 gttgagaaacaattg 148  Q
    |||| ||||||||||    
T  14689636 gttgtgaaacaattg 14689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 35616030 - 35616215
Alignment:
Q  51 ggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaatt-g 148  Q
    ||||||||||||||||||||||| ||||||| | | | ||| ||||| | || |||| ||||||||| | |||||||||| ||||||  ||||||||| |    
T  35616030 ggtgagtcttgggaaaccaaaagcgaagatcatcaagaaatcaaagg-ctagagttgattctctttt-gtggttagattctagagtttggaaacaattag 35616127  T
Q  149 caaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggaga 236  Q
     |||||| |||| |||||||||||| ||| | | ||| ||| | || ||||||  ||||   ||||||||||||||||||||||||||    
T  35616128 gaaacaccttgggtgagtgaaatcattgagtctcttgttcacgggaagagattgagaaatgagtagaaattaggtttgttcttggaga 35616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 5058148 - 5058189
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5058148 atagtggattggagagatcaatctctcctctagagtaggtca 5058189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 13239854 - 13239895
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  13239854 atagtggattggagagatcaatctctcctccagagtaggtca 13239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 16641005 - 16640964
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16641005 atagtggattggagagatcaatctctcctccagagtaggtca 16640964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 18441713 - 18441672
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  18441713 atagtggattggagagttcaatctctcctctagagtaggtca 18441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25412863 - 25412904
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  25412863 atagtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 28278419 - 28278460
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  28278419 atagtggattggagagatcaatctctcctccagagtaggtca 28278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 37439244 - 37439285
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  37439244 atagtggattggagagatcaatctctcctccagagtaggtca 37439285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40147364 - 40147405
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  40147364 atagtggattggagagatcaatctctcctccagagtaggtca 40147405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 13343163 - 13343223
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  ||| ||| ||||||||    
T  13343163 atagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggt 13343223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 316870 - 316929
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| ||| |||| ||||||    
T  316870 tggatcggagggatcaatctctcccctagagtaggtcattgttggaccgaacttggtaaa 316929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 10700946 - 10700756
Alignment:
Q  62 ggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaatt-gcaaacacattg 159  Q
    |||||||||| | ||||||||| ||| ||| |||||| |||| |||||   ||||||| || ||||||| | |  || ||||||||| | |||||| |||    
T  10700946 ggaaaccaaacgtgaagatcctcaggaaataaaaggctaaggtttggtga-cttttgggggctagattctaaaaatgggaaacaattaggaaacaccttg 10700848  T
Q  160 gttgagtgaaa-tcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    | || |||||| ||| ||| | ||||| |||||| |  ||||| | |||| |||||||||||||||||||||| |||| |||||||||||||    
T  10700847 ggtgcgtgaaaatcattgagtattttgttcatgaaaatagattggaaaaaaggtagaaattaggtttgttcttagagagcttgttgaagcta 10700756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 213568 - 213609
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  213568 atagtggattggagagatcaatctctcctccatagtaggtca 213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 9789289 - 9789248
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  9789289 atagtggattggagagttcaatctctcctccagagtaggtca 9789248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 16409578 - 16409619
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  16409578 atagtggattggagagttcaatctctcctccagagtaggtca 16409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 26170865 - 26170906
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  26170865 atagtggattggagagttcaatctctcctccagagtaggtca 26170906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 26177985 - 26178026
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  26177985 atagtggattggagagttcaatctctcctccagagtaggtca 26178026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 29720467 - 29720508
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  29720467 atagtggattggagagtacaatctctcctctagagtaggtca 29720508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 16452183 - 16452250
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||| ||||||||| | |||||||||||  |||| ||| ||||||||||| ||||    
T  16452183 atagtggattggagagataaatctctcccccagagtaggtca-agttggaccgaactgggtaaacattt 16452250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 21205995 - 21205883
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||  ||||||||||| || || | |||||| | || |||||| ||||| ||||| ||||| | ||| |||| | |||| ||||||||||||    
T  21205995 acacatgagtgaggagtcatttgtcagaaatttgggtgaattttaggaaactaaaagtgaagaaccttatgaaatcaaagactaaggattggttctcttt 21205896  T
Q  117 tggaggttagatt 129  Q
    ||  |||||||||    
T  21205895 tgagggttagatt 21205883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 33906095 - 33906032
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    ||||| ||||||| |||||||||||| | ||||||||||||| ||||| ||| | |||||||||    
T  33906095 atagtagattggaaagatcaatctcttccctagagtaggtcaatgttggaccgagctgggtaaa 33906032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 39468712 - 39468657
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  39468712 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 39468657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 13488209 - 13488263
Alignment:
Q  197 agatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  13488209 agattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 13488263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 22097879 - 22097921
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    |||| ||||||||||||| |||||||||||||| |||||||||    
T  22097879 aaaagggtagaaattagggttgttcttggagaatttgttgaag 22097921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 3325928 - 3325973
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| |||||||||||| |||||||||| ||| |||||||||||||    
T  3325928 aaaaaggtagaaattagttttgttcttgaagagcttgttgaagcta 3325973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 10593361 - 10593402
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  10593361 atagtggattggagagtacaatctctcctccagagtaggtca 10593402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 13239766 - 13239811
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| || ||||| | ||||||||||||||||    
T  13239766 aaaatggtagaaattagggtttttctttgtgaacttgttgaagcta 13239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 13488306 - 13488347
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  13488306 atagtggattggagagatcaatctctccccgagattaggtca 13488347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 19806466 - 19806507
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  19806466 atagtggattggagagatcaatctctcccccagattaggtca 19806507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25078224 - 25078265
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  25078224 atagtggattggagagtacaatctctcctccagagtaggtca 25078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25136193 - 25136234
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  25136193 atagtggattggagagtacaatctctcctccagagtaggtca 25136234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 28750720 - 28750679
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  28750720 atagtggattggagagatcaatctctcccccagattaggtca 28750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 29722627 - 29722668
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  29722627 atagtggattggagagtacaatctctcctccagagtaggtca 29722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 29751225 - 29751184
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  29751225 atagtggattggagagtacaatctctcctccagagtaggtca 29751184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 30182691 - 30182732
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||| ||||    
T  30182691 atagtggattggagagttcaatctctcctccagagtatgtca 30182732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 30682987 - 30682946
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  30682987 atagtggattggagagatcaatctctcccccagattaggtca 30682946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 32636927 - 32636968
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  32636927 atagtggattggagagatcaatctctcccccagattaggtca 32636968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 36074108 - 36074067
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| | |||||||||    
T  36074108 atagtggattggagagttcaatctctcctccaaagtaggtca 36074067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40380194 - 40380235
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  40380194 atagtggattggagagttcaaactctcctccagagtaggtca 40380235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40382405 - 40382446
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  40382405 atagtggattggagagttcaaactctcctccagagtaggtca 40382446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 46860296 - 46860534
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggcca--agggttggttctct 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||| | |  ||||||||||||||    
T  46860296 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaagactaagagggttggttctct 46860395  T
Q  115 tttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa--tcaatgaatgttttgctcatgagaggagatttggaaaat-g 210  Q
    ||||| |||||||||| |||||||||||||||||| |||||| ||||  ||||||||  ||||||| ||| ||| ||||  |  ||||||  |||||| |    
T  46860396 tttgggggttagattctagagttgagaaacaattgtaaacaccttgggagagtgaaaattcaatgagtgtcttgttcat-tggtgagattgagaaaatgg 46860494  T
Q  211 gtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||||||||||| | || |||||||||||||    
T  46860495 gtagaaattaggtttgttctttgtgagcttgttgaagcta 46860534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 34491038 - 34491194
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  34491038 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 34491137  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaat 171  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  |||||||||    
T  34491138 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaat 34491194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 6095942 - 6095787
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| ||| || || |||||||||||||    
T  6095942 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaaaggttggttctctt 6095843  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  6095842 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 6095787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 4569776 - 4570012
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| |||| | ||| |||||| ||||||||||||||||    
T  4569776 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagatgatctttagtgaaatcaaaggctaagggttggttctctt 4569875  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| |||||||  ||||||||| |||||| |||| |||||| |||||| ||| ||||||| || |  |  |||||| ||||||| |||    
T  4569876 ttggtggttagattctagagttggaaaacaattgtaaacaccttgggtgagtgaaaatcattgagtgttttgttc-tttggtgagattgggaaaatgggt 4569974  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||| | | || ||| |||||||||    
T  4569975 agaaattagggttgttcattgtgagcttattgaagcta 4570012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 40913164 - 40913309
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||||||||||| | |||||||||  ||||||||||||||||    
T  40913164 acacatgagtggagagtcatttgtgagcaaattgggtgagtcttgtgaaagcaaaagagaagatccttagtgaaattaaaggttaagggttggttctctt 40913263  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||    
T  40913264 ttgggggttagattctagagttgggaaacaattgtaaacaccttgg 40913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 30235950 - 30236185
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| | |||  ||||| || | |||||||||||    
T  30235950 acacaagagtggagagtcatttgtgagcaagttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcgaaggctaatgattggttctctt 30236049  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||   |||||||   |||| ||| ||| ||||  || |||||| ||||||| ||||    
T  30236050 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggatagtgaaaatcatgagtgtcttgttcat-tgatgagattgggaaaatgggta 30236148  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  30236149 gaaattagggttgttctttgtgagcttgttgaagcta 30236185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 54593530 - 54593764
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| | |||||||||| |||||||||| ||||||||||||| | ||| |||||| ||||||| ||||||||    
T  54593530 acacatgagtggagagtcttttgtgagcaacttgagtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcaaaggctaagggtt-gttctctt 54593628  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatg-gta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| |||||||| | |    
T  54593629 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgtgca 54593727  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  54593728 gaaattagggttgttctttgtgagcttgttgaagcta 54593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 5434220 - 5433984
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||| | || | ||| ||||||||    
T  5434220 acacatgagtggagagtcttttgtgagcaagttgggtgagtcttgggaaaccaaaagagaagatccttatgtaatcaaagactaaagattgattctcttt 5434121  T
Q  117 tggaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttg--gaaaatggt 212  Q
    ||| |||||||||  ||||||| |||||||||| |||||| |||| |||||| |||||| ||| ||| ||| ||||  |  |||||| |  |||||||||    
T  5434120 tgggggttagattatagagttgggaaacaattgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcat-tggtgagattgggagaaaatggt 5434023  T
Q  213 agaaatta-ggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||| ||||||||||| | || |||||| ||||||    
T  5434022 agaaattagggtttgttctttgtgagcttgttaaagcta 5433984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 36018676 - 36018831
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| | || |||||||||||    
T  36018676 acacatgaatggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatggattggttctctt 36018775  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| | |||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  36018776 ttggggtttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 36018831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 49199810 - 49199578
Alignment:
Q  21 atgagtggagagtcatttgtgagcaactagggt-gagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttg 118  Q
    |||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||| | ||| |||||| || ||||||||||||||||    
T  49199810 atgagtggagagtcttttgtgagcaacttgggttgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttg 49199711  T
Q  119 gaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaa 216  Q
    | |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| || |  |  |||||| ||||||| |||||||    
T  49199710 ggggttagattctagagttgggaaacaattgtaaacactttgggagagtgaaaatcatgagtgtcttgttcgt-tggtgagattgggaaaatgggtagaa 49199612  T
Q  217 attaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| | |||||||| | || |||||||||||||    
T  49199611 attaaggttgttctttgtgagcttgttgaagcta 49199578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 55302308 - 55302153
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||| || ||||||||||||| | |||||||||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||||    
T  55302308 acacatgagtggagattcttttgtgagcaacttgagtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaggggttggttctctt 55302209  T
Q  116 ttggaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    ||| ||||||||||  ||||||| |||||||||| ||| || ||||  ||||||||    
T  55302208 ttgtaggttagattatagagttgggaaacaattgtaaataccttgggagagtgaaa 55302153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 41819865 - 41819712
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||||||| |||||||||||||||| | |||||||||  ||||||||||||||||||| ||| | ||| ||| || |||||||||||||||||    
T  41819865 acacatgagtggagactcatttgtgagcaacttgagtgagtcttatgaaaccaaaagagaagatctttatgaaatcaaa-gctaagggttggttctcttt 41819767  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    | | |||||||||| ||||||| |||| ||||| |||||| ||||  ||||||||    
T  41819766 tagcggttagattctagagttgggaaataattgtaaacaccttgggagagtgaaa 41819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 43404076 - 43403975
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||| | ||| |||||| | ||||||||||||||    
T  43404076 acacatgagtggagagtcatttgggagcaacttgggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctt 43403977  T
Q  116 tt 117  Q
    ||    
T  43403976 tt 43403975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 26323385 - 26323182
Alignment:
Q  50 gggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttaga-ttcagagttgagaaacaatt- 147  Q
    ||||||||||||||| ||||||| |||| ||||||||| ||| ||| || |||||||||||||||||||  ||||||| || ||||||| |||||||||     
T  26323385 gggtgagtcttgggagaccaaaaaagaatatccttaggaaatcaaaagctaagggttggttctcttttgagggttagattttagagttgggaaacaattg 26323286  T
Q  148 gcaaacacattggttgagtgaa-atcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaa 246  Q
    | |||||| |||  |||||||| |||| | | ||| ||| ||||| || ||||||  ||||| |||| |||||||||||||| ||| |||  ||||||||    
T  26323285 ggaaacaccttgagtgagtgaacatcattaagtgtcttgttcatgggatgagattgagaaaagggtaaaaattaggtttgtttttgaagagtttgttgaa 26323186  T
Q  247 gcta 250  Q
    ||||    
T  26323185 gcta 26323182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 43402133 - 43402032
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||||    
T  43402133 acacatgagtggagaatcatttgtgaacaacttgggtaagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctt 43402034  T
Q  116 tt 117  Q
    ||    
T  43402033 tt 43402032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 1683313 - 1683440
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||||| | |||||| |||||||||  ||||||||||| || |||||||||||||||||||||  ||| |||||| ||||||||||| |||||    
T  1683313 acacatgagtggataatcatttatgagcaactttggtgagtcttgtgagaccaaaagagaagatccttagaaaatcaaaggctaagggttggttatcttt 1683412  T
Q  117 tggaggttagattc-agagttgagaaaca 144  Q
    ||| ||||||| || ||||||| ||||||    
T  1683413 tgg-ggttagaatctagagttgggaaaca 1683440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 41819589 - 41819517
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttatt 333  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| || |||||||    
T  41819589 tatagtggattggagacatcaatctctcctccagagtaggtcattgttggaccaaactgggtgaacatttatt 41819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 47304077 - 47304208
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||  |||||||||||||  |||||||||||  |||||||||||||| |||||||| | ||| |||  | ||||||||||||||||    
T  47304077 acacatgagtggagagtt-tttgtgagcaacttaggtgagtcttgtaaaaccaaaagagaatatccttagtgaaatcaaaaactaagggttggttctctt 47304175  T
Q  116 ttggaggttagattc-agagttgagaaacaatt 147  Q
    |||| |||||||||| |||||||  ||||||||    
T  47304176 ttgggggttagattctagagttggaaaacaatt 47304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 34795713 - 34795795
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttg 118  Q
    ||||| || |||| ||||||||||||||| |||||||||||||||||||||  ||| |||||| ||||| |||||||||||||    
T  34795713 tttgtaagaaacttgggtgagtcttgggagaccaaaagagaagatccttagaaaatcaaaggctaagggatggttctcttttg 34795795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 55302037 - 55301962
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttattagtg 337  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| ||| |||| ||| || |||| ||||||    
T  55302037 atagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacatttcttagtg 55301962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 20937501 - 20937713
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agag 134  Q
    |||||||  |||| |||||| |||||||| ||||||||||||||| |||||| ||| |||||  || ||||||||||||||||| |  ||||||| ||||    
T  20937501 tttgtgacaaacttgggtgattcttgggagaccaaaagagaagattcttaggaaatcaaaggataaaggttggttctcttttgg-gagtagattctagag 20937599  T
Q  135 ttgagaaacaatt-gcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaaattaggtttgttcttg 232  Q
    |||||||| |||| | |||||  || | |||||| ||||| ||| | | ||| ||||   | |||| | ||||||| ||||||||||| ||||||| |||    
T  20937600 ttgagaaataattggaaaacagcttagatgagtgcaatcattgagtctcttgttcatagaaagaga-tcggaaaataggtagaaattatgtttgtttttg 20937698  T
Q  233 gagaacttgttgaag 247  Q
    |||| ||||||||||    
T  20937699 gagagcttgttgaag 20937713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 45095266 - 45095307
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45095266 atagtggattggagagatcaatctctcctctagagtaggtca 45095307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 43403809 - 43403749
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||    
T  43403809 atagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggt 43403749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 46860577 - 46860624
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttg 309  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  46860577 atagtggattggagagatcaatctttcctccagagtaggtcattgttg 46860624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 6095664 - 6095623
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  6095664 atagtggattggagagatcaatctctcctccagagtaggtca 6095623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 7762368 - 7762409
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  7762368 atagtggattggagagatcaatctctcctccagagtaggtca 7762409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 9581385 - 9581426
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  9581385 atagtggattggagagatcaatctctcctccagagtaggtca 9581426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 34491315 - 34491356
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  34491315 atagtggattggagagatcaatctctcctccagagtaggtca 34491356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 43401866 - 43401806
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| ||| ||||||||    
T  43401866 atagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggt 43401806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 49199534 - 49199474
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| |||| ||| ||||||||    
T  49199534 atagtggattggagagattaatctctcctccagactaggtcatggttggaccgaactgggt 49199474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 54593807 - 54593866
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| |||||| ||||  |||| ||||||||||||    
T  54593807 atagtggattggagagatcaatctctcctccagagtatgtca-agttggaccaaactgggt 54593866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 5433944 - 5433901
Alignment:
Q  265 gtggattggagagatcaatctctcctctagagtaggtcattgtt 308  Q
    ||||||||||||||||||||||||||| | ||||||||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 7764567 - 7764608
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  7764567 atagtggattggagagatgaatctctcctccagagtaggtca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 7780069 - 7780028
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  7780069 atagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 19683954 - 19683913
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  19683954 atagtggattggagagatcaatctctcctccatagtaggtca 19683913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 27305775 - 27305734
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  27305775 atagtggattggagagatcaatctctcctccaaagtaggtca 27305734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 37408561 - 37408602
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  37408561 atagtggattgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 9636191 - 9636131
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||| ||||||||||||| | |||||||||   ||||||| ||||||||    
T  9636191 atagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggt 9636131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 33191934 - 33192001
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||||||| || ||||| |||||| ||||    
T  33191934 atagtggattagagagatcaatctct-ctccagaggaggtcattgttggacaaaacttggtaaacattt 33192001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 4570055 - 4570094
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  4570055 atagtggattggagagatcaatctctactccagagtaggt 4570094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 5236619 - 5236564
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  5236619 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 5236564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 16499132 - 16499171
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  16499132 atagtggattggagagatcaatctctcccccagagtaggt 16499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 247
Target Start/End: Complemental strand, 35139026 - 35138817
Alignment:
Q  40 tgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaat-taaaggccaagggttggttctcttttggaggttaga-ttcagagttg 137  Q
    ||||||||| |  |||||||||||| ||||||| |||||||||||||| |||  ||| || |||||||  ||||||||||| ||||| | || | |||||    
T  35139026 tgagcaacttgaatgagtcttgggagaccaaaatagaagatccttaggaaataaaaaagctaagggttaattctcttttgg-ggttaaattttaaagttg 35138928  T
Q  138 agaaacaattg-caaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggag 235  Q
     ||||||||||  |||||| ||||  ||||| |||||| ||| ||| ||| |||||  | ||||||  ||||  ||||||||||| |||||||||||| |    
T  35138927 -gaaacaattgtgaaacaccttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgtttgttcttggtg 35138829  T
Q  236 aacttgttgaag 247  Q
    |  |||||||||    
T  35138828 agtttgttgaag 35138817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 36796236 - 36796307
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtctt-gggaaaccaaaagagaagatccttagg 87  Q
    ||||| ||||||||||||||| || ||||||| |||||| ||||  |||||||||||| | |||||||||||    
T  36796236 acacaagagtggagagtcattggttagcaacttgggtgaatcttaaggaaaccaaaagtgtagatccttagg 36796307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 39127421 - 39127607
Alignment:
Q  66 accaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaatt-gcaaacacattggttg 163  Q
    |||||||||||| | ||||||| ||| |||||| ||||||| |||||||||| | ||||| |||| ||||||  ||||||||| | ||| || ||||  |    
T  39127421 accaaaagagaatacccttaggaaatcaaaggctaagggttagttctctttt-gtggttaaattctagagtttggaaacaattggaaaataccttggaag 39127519  T
Q  164 agtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| |||||| |||  || ||  |||||||| ||||||  ||||   ||| |||||| |||||||||||| || |||||||||||||    
T  39127520 agtgaaaatcattgagcgtcttattcatgagaagagattgagaaataagtataaattatgtttgttcttggtgagcttgttgaagcta 39127607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 45095169 - 45095215
Alignment:
Q  196 gagatttggaaaatggtagaaattaggtttgttcttggagaacttgt 242  Q
    |||||| |||||||||||||||||||| |||||||| | ||||||||    
T  45095169 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgt 45095215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 760950 - 760991
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  760950 atagtggattggagagatcaatctctcccccagattaggtca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 801195 - 801236
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  801195 atagtggattggagagtacaatctctcctccagagtaggtca 801236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2075140 - 2075099
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||||||||||||||| | |||||||||||    
T  2075140 atagtggatttgagagatcaatctctccccgagagtaggtca 2075099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3617553 - 3617594
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  3617553 atagtggattggagagtacaatctctcctccagagtaggtca 3617594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4600809 - 4600768
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  ||| ||||||||||||||||||||    
T  4600809 atagtggattggagagtacaaactctcctctagagtaggtca 4600768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 5258209 - 5258168
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  5258209 atagtggattggagagttcaatctcttctccagagtaggtca 5258168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 7762280 - 7762325
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||||| |||||||| | ||||||||||||||||    
T  7762280 aaaagggtagaaattagggttgttctttgtgaacttgttgaagcta 7762325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 23198004 - 23197963
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  23198004 atagtgaattggagagttcaatctctcctccagagtaggtca 23197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 23200203 - 23200162
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  23200203 atagtgaattggagagttcaatctctcctccagagtaggtca 23200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 25491114 - 25491077
Alignment:
Q  212 tagaaattaggtttgttcttggagaacttgttgaagct 249  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  25491114 tagaaattaggtttgttctttgagagcttgttgaagct 25491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25637530 - 25637571
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  25637530 atagtggattggagagtacaatctctcctccagagtaggtca 25637571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 29682462 - 29682495
Alignment:
Q  262 atagtggattggagagatcaatctctcctctaga 295  Q
    |||||||||||||||||||||||||||| |||||    
T  29682462 atagtggattggagagatcaatctctcccctaga 29682495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 29810971 - 29811012
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  29810971 atagtggattggagagatcaatctctcccccagattaggtca 29811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 29813165 - 29813225
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||||||||||||||||| | ||| | ||||| ||||| ||| ||||||||    
T  29813165 tatagtggattggagagatcaatctctcccccagatttggtca-tgttggaccgaactgggt 29813225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 30236228 - 30236269
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  30236228 atagtggattggagagatcaatctctcccccagattaggtca 30236269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 31340457 - 31340309
Alignment:
Q  103 ggttggttctcttttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatt 201  Q
    ||||||| | ||||| | |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||||||| ||||  | | |||||    
T  31340457 ggttggtgcccttttaggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgttttgttcattggtg-agatt 31340359  T
Q  202 tggaaaat-ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
     ||||||| ||||||||||  | |||||||| | || |||||||||||||    
T  31340358 gggaaaattggtagaaattgaggttgttctttgtgagcttgttgaagcta 31340309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40735486 - 40735527
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  40735486 atagtggattggagagatcaatctctcccccagattaggtca 40735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40913396 - 40913437
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  40913396 atagtggattggagagatcaatctctcccccagattaggtca 40913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 44331648 - 44331689
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  44331648 atagtggattggagagatcaatctctcccccagattaggtca 44331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 45283089 - 45283130
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  45283089 atagtggattggagagtacaatctctcctccagagtaggtca 45283130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 46173460 - 46173501
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  46173460 atagtggattggagagatcaatctctcccccagattaggtca 46173501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 47304354 - 47304395
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  47304354 atagtggattggagagatcaatctctccccaagattaggtca 47304395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 8166604 - 8166568
Alignment:
Q  211 gtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    ||||||||||||||||||||||||||  |||||||||    
T  8166604 gtagaaattaggtttgttcttggagagtttgttgaag 8166568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 10209278 - 10209338
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||||  ||| |||||||| |||||||||||   ||| ||||||||||||    
T  10209278 atagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggt 10209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 24635277 - 24635317
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||| |||||||||||||||  ||||||||||||    
T  24635277 ggtagaaattaagtttgttcttggagagtttgttgaagcta 24635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 29813083 - 29813123
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  29813083 ggtagaaattagggttgttctttgtgaacttgttgaagcta 29813123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 51398834 - 51398874
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  51398834 ggtagaaattagggttgttcttagtgaacttgttgaagcta 51398874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 11348523 - 11348758
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  11348523 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 11348622  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaa-tggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| |||||| |||||    
T  11348623 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaattggta 11348721  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  11348722 gaaattagggttgttctttgtgagcttgttgaagcta 11348758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 37033416 - 37033181
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| | ||||||||||||||    
T  37033416 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctt 37033317  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    || | |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  37033316 tttggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 37033218  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  37033217 gaaattagggttgttctttgtgagcttgttgaagcta 37033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 34603401 - 34603545
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  34603401 acacatgagtgaaaagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttt 34603500  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||||||||||||| ||||||| |||||||||| |||||| ||||    
T  34603501 tggaggttagattctagagttgggaaacaattgtaaacaccttgg 34603545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 37879254 - 37879019
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||||||| | ||| |||||| |||| |||||||||||    
T  37879254 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaaggattggttctctt 37879155  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  37879154 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaataggta 37879056  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  37879055 gaaattagggttgttctttgtgagcttgttgaagcta 37879019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 29136074 - 29136307
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctttt 117  Q
    |||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||| ||||||||||    
T  29136074 acatgagtggagagttttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctctttt 29136173  T
Q  118 ggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtaga 215  Q
    || |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||||    
T  29136174 gggggttagattctagagttgtgaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggtaga 29136272  T
Q  216 aattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| |||||||| | || |||||||||||||    
T  29136273 aattagggttgttctttgtgagcttgttgaagcta 29136307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 13547432 - 13547197
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| ||||| | ||| |||||| ||||||||||||||||    
T  13547432 acacatgagtggagagtcttttgtgagcaacttgggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctctt 13547333  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||| ||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  13547332 ttgggggttagattctagatttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 13547234  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  13547233 gaaattagggttgttctttgtgagcttgttgaagcta 13547197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 41135656 - 41135877
Alignment:
Q  27 ggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttag 126  Q
    |||||||| |||||||| |||| ||||||||||| |||||||||||||||||||| || || |||||||||| |||| ||||||||||||||| ||||||    
T  41135656 ggagagtc-tttgtgagaaacttgggtgagtcttaggaaaccaaaagagaagatcatttggaaattaaaggctaaggattggttctcttttgggggttag 41135754  T
Q  127 attc-agagttgagaaacaattg-caaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtt 224  Q
    |||| |||||||||||||| |||  |||||| |||| |||| ||||||| ||| | | ||| || || ||||||| | | |||| |||||||||||| ||    
T  41135755 attctagagttgagaaacatttgaaaaacaccttgggtgagggaaatcattgagtctcttgttcctgtgaggagaatagaaaaagggtagaaattagatt 41135854  T
Q  225 tgttcttggagaacttgttgaag 247  Q
    |||||||| ||||||| ||||||    
T  41135855 tgttcttgaagaactttttgaag 41135877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 42298318 - 42298083
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| || | ||| |||||| ||| ||||||||||||    
T  42298318 acacatgagtggagagtcatttgcgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcctaagtgaaatcaaaggctaagagttggttctctt 42298219  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaa-tggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  |||| |||   |||| ||| ||| ||||  |  |||||| |||||| |||||    
T  42298218 ttgggggttagattctagagttgtgaaacaattgtaaacaccttgggagagtaaaaatcatgagtgtcttgttcat-tggtgagattgggaaaattggta 42298120  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| ||||| || | || |||||||||||||    
T  42298119 gaaattagggttgttttttgtgagcttgttgaagcta 42298083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 47114996 - 47115231
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatcctt-aggtaattaaaggccaagggttggttctctt 115  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| | | ||| |||||| ||||||||||||||||    
T  47114996 acacatgaatggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaatgaaatcaaaggctaagggttggttctctt 47115095  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaa-tggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||  ||||  ||||||||   |||| ||| ||| ||||  |  |||||| |||||| |||||    
T  47115096 ttgggggttagattctagagttgggaaacaattgtaaacatcttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaattggta 47115194  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||| ||||||    
T  47115195 gaaattagggttgttctttgtgagcttgtttaagcta 47115231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 13549343 - 13549127
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| ||||| | ||| |||||| ||||||||||||||||    
T  13549343 acacatgagtggagagtcttttgtgagcaacttgggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctctt 13549244  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||| ||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  13549243 ttgggggttagattctagatttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 13549145  T
Q  214 gaaattaggtttgttctt 231  Q
    ||||||||| ||||||||    
T  13549144 gaaattagggttgttctt 13549127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 34602682 - 34602569
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  34602682 acacatgagtgaaaagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttt 34602583  T
Q  117 tggaggttagattc 130  Q
    ||||||||||||||    
T  34602582 tggaggttagattc 34602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 7482573 - 7482430
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||| ||| || |||||||||||||||||    
T  7482573 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaacaaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttt 7482475  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    ||| |||||||||| ||||||| ||| |||||| |||||| ||||    
T  7482474 tgggggttagattctagagttgggaagcaattgtaaacaccttgg 7482430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 37168122 - 37168357
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||| | ||| |||||| || ||||| |||||||    
T  37168122 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctaaaggttgattctctt 37168221  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| |||   ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  37168222 ttgggggttagattctagagttgggaaacaattgtaaacaccttgagagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 37168320  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||| ||||||    
T  37168321 gaaattagggttgttctttgtgagcttgtttaagcta 37168357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 28242213 - 28242368
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| | ||| |||||| | ||||||||||||||    
T  28242213 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaatatccttagtgaaatcaaaggctatgggttggttctctt 28242312  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    || | |||||||||| |||||||  ||||||||| |||||| ||||  ||||||||    
T  28242313 ttaggggttagattctagagttggaaaacaattgtaaacaccttgggagagtgaaa 28242368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 6808272 - 6808512
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||| || |||||||||||||||||||||||||||||  ||| |||||||||||||||||| ||| ||||| |||| |  | ||||||||||| ||    
T  6808272 acacatgaatgaagagtcatttgtgagcaactagggtgagtaatggaaaaccaaaagagaagatcattatgtaatcaaagacggaaggttggttctc-tt 6808370  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatggtag 214  Q
    | |||||||||||| |||||||||||||| | | |||||| ||||  ||||| |||| | ||| ||| ||| |||||||  |||||| || |||||||||    
T  6808371 tcgaggttagattctagagttgagaaacattgggaaacactttgggagagtgaaaattattgagtgtcttgttcatgagtagagattagggaaatggtag 6808470  T
Q  215 aa------attaggtttgttcttggagaacttgttgaagcta 250  Q
    ||      |||||||||||||||||||| |||||||||||||    
T  6808471 aaattaggattaggtttgttcttggagagcttgttgaagcta 6808512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 193436 - 193581
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||| ||| |||||| ||||||||||||| || ||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  193436 acacatgtgtgaagagtcttttgtgagcaacttggatgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 193535  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||    
T  193536 ttgggggttagattctagagttgggaaacaattgtaaacaccttgg 193581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 47255682 - 47255448
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||| ||||||||| |||||||||||||  | ||||||||| |||||||||||||||||||||||| | ||| |||| | ||||||||||||||||    
T  47255682 acacatgattggagagtcttttgtgagcaacttag-tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaagactaagggttggttctctt 47255584  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||| ||||| |||  | ||||  ||||||||   |||| ||| ||| ||||  |  |||||| | ||||| ||||    
T  47255583 ttgggggttagattctagagttgggaaataattgtaaatgccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattggaaaaatgggta 47255485  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  47255484 gaaattagggttgttctttgtgagcttgttgaagcta 47255448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 31926049 - 31925895
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||| |||||||||| || ||||||||||||| ||||||| |||| |||||||||||||||||||||||| | ||| |||||| || |||||||||||||    
T  31926049 acacgtgagtggagaatcttttgtgagcaacttgggtgagacttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctctt 31925950  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| ||||||| ||| || ||| |||||| ||||  ||||||||    
T  31925949 ttgggggttagattctagagttg-gaagcagttgtaaacaccttgggagagtgaaa 31925895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 19752510 - 19752650
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||  |||||||||||||  | ||||||||| |||||||||||||||||||||||| | ||| |||||| || | |||||||||||    
T  19752510 acacatgagtggagagtattttgtgagcaacttagatgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatgattggttctctt 19752609  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacac 155  Q
    |||| |||||||||| ||||||| |||| ||| | ||||||    
T  19752610 ttgggggttagattctagagttgggaaataatcgtaaacac 19752650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 19754316 - 19754448
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatcctta----ggtaattaaaggccaagggttggttct 112  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||     | ||| |||||  || ||||||||||    
T  19754316 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaaaatccttataagtgaaatcaaaggataatggttggttct 19754415  T
Q  113 cttttggaggttagattc-agagttgagaaaca 144  Q
    ||||||| |||||||||| ||||||| ||||||    
T  19754416 cttttgggggttagattctagagttgggaaaca 19754448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 22079158 - 22079278
Alignment:
Q  27 ggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttag 126  Q
    |||||||| |||||||||||||  |||||||||||| ||||||||| | ||||| |||| | ||| |||||| |||| || |||||||||||| ||||||    
T  22079158 ggagagtc-tttgtgagcaacttaggtgagtcttggcaaaccaaaatataagatgcttatgaaatcaaaggctaaggatt-gttctcttttgggggttag 22079255  T
Q  127 attc-agagttgagaaacaattg 148  Q
    |||| ||||||||||||||||||    
T  22079256 attctagagttgagaaacaattg 22079278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 28242406 - 28242467
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  28242406 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggt 28242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 47255405 - 47255345
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  47255405 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggt 47255345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 47115275 - 47115335
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||    
T  47115275 atagtggattggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggt 47115335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 31925772 - 31925731
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31925772 atagtggattggagagatcaatctctcctctagagtaggtca 31925731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 12318719 - 12318631
Alignment:
Q  162 tgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||| ||| | | ||| ||||| |  ||||||||||||  |||||||||||||||||||| |||||| |||||||||||||    
T  12318719 tgagtgaaatcattgagtttcttgttcatgggtagagatttggaaatgggtagaaattaggtttgttcatggagagcttgttgaagcta 12318631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 12318801 - 12318725
Alignment:
Q  40 tgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||| ||||||||||||||| ||||||| |||| ||| || || ||| |||||| |||||||||||||||||    
T  12318801 tgagcaacttgggtgagtcttgggagaccaaaatagaaaatcttttggaaatcaaaggctaagggttggttctcttt 12318725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 42298040 - 42297980
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||| ||| ||||||||    
T  42298040 atagtggattgaagagatcaatctctcctccagagtaggtcatggttggaccgaactgggt 42297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 2926613 - 2926675
Alignment:
Q  263 tagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||| ||||||    
T  2926613 tagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggtaaa 2926675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 8550852 - 8550811
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  8550852 atagtggattggagagatcaatctctcctccagagtaggtca 8550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 11348801 - 11348842
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  11348801 atagtggattggagagatcaatctctcctccagagtaggtca 11348842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 13547154 - 13547113
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  13547154 atagtggattggagagatcaatctctcctccagagtaggtca 13547113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 13549065 - 13549024
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  13549065 atagtggattggagagatcaatctctcctccagagtaggtca 13549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 37168401 - 37168442
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  37168401 atagtggattggagagatcaatctctcctccagagtaggtca 37168442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 9109484 - 9109416
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||| ||||||||||||||||||| |  ||||||| ||||| ||||||||||||| |||||| ||||    
T  9109484 atagtgtattggagagatcaatctcttccatagagtaagtcatcgttgaaccaaactaggtaaacattt 9109416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 22079424 - 22079488
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |||||||| |||||| ||||    
T  22079424 tggattggagagatcaatttctcctccaaagtaggtcattgctggaccaaacttggtaaacattt 22079488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 25651922 - 25652146
Alignment:
Q  29 agagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctctttt-ggaggttaga 127  Q
    ||||| || ||||||||||| |||||| |||||||||| |||||| ||||||||||||  ||| |||    |||  |||||||||||||  || | ||||    
T  25651922 agagttatatgtgagcaacttgggtgaatcttgggaaagcaaaagtgaagatccttagaaaatcaaatattaagaattggttctcttttatgaaggtaga 25652021  T
Q  128 ttc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggttt 225  Q
    ||| ||||||| |||||||||| |||||| ||   || ||| |||||| ||| | ||||| ||||||||  | |||  |||| |||||||||||| || |    
T  25652022 ttctagagttgggaaacaattgtaaacaccttaagtgtgtgaaaatcattgagtattttgttcatgagaaaatattgagaaattggtagaaattaagtgt 25652121  T
Q  226 gttcttggagaacttgttgaagcta 250  Q
    ||| || ||||  ||||||||||||    
T  25652122 gttatttgagagtttgttgaagcta 25652146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 5460009 - 5460056
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttg 309  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  5460009 atagtagattggagagatcaatctctcatctagagtagatcattgttg 5460056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 303
Target Start/End: Original strand, 29136353 - 29136391
Alignment:
Q  265 gtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  29136353 gtggattggagagatcaatctctcctccagagtaggtca 29136391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3189433 - 3189474
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  3189433 atagtggattggagagatcaatctctcatccagagtaggtca 3189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3198250 - 3198291
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  3198250 atagtggattggagagatcaatctctcatccagagtaggtca 3198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3207089 - 3207130
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  3207089 atagtggattggagagatcaatctctcatccagagtaggtca 3207130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 13316417 - 13316376
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  13316417 atagtggattggagagttcaatctctcctccagagtaggtca 13316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 20762775 - 20762816
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  20762775 atagtggattggagagatcaatctctcctacagagtaggtca 20762816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 46065021 - 46065062
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  46065021 atagtggattggagagatcaatctctcccccagagtaggtca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 9109733 - 9109665
Alignment:
Q  28 gagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaag 96  Q
    ||||||| ||||||||||| | || |||||||||||||| ||||| |||||||| | ||||||| ||||    
T  9109733 gagagtcttttgtgagcaatttggatgagtcttgggaaatcaaaatagaagatcatgaggtaatcaaag 9109665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 37033137 - 37033077
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||| ||||||| ||| | |||||||||| |||| ||| ||||||||    
T  37033137 atagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaactgggt 37033077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 13659401 - 13659362
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  13659401 atagtggattggagagatcaatctctcccccagagtaggt 13659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 28220389 - 28220334
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  28220389 gagattcggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 28220334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 2926523 - 2926561
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgtt 243  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  2926523 aaaatggtagaaattaggtttgtgcttgaagaacttgtt 2926561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 6808555 - 6808624
Alignment:
Q  261 tatagtggattggagagatcaatctc-tcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||  || |||| | |||||||||    
T  6808555 tatagtggattggagagatcaatctcttcctc-agagtaggttattgttggtccgaactagataaatattt 6808624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 13138041 - 13137999
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcat 304  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||    
T  13138041 atagtggattgaagagagcaatctctcccctagagtaggtcat 13137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 303
Target Start/End: Original strand, 34603683 - 34603721
Alignment:
Q  265 gtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  34603683 gtggattgaagagatcaatctctcctccagagtaggtca 34603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 51765500 - 51765538
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtagg 300  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  51765500 atagtggattggagagttcaatctctcctccagagtagg 51765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 193714 - 193755
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||| ||| |||||| ||||    
T  193714 atagtggattggagagatcaatctcttctccagagtatgtca 193755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 834232 - 834191
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||| |||||||| | |||||||||||    
T  834232 atagtggattggagagatctatctctcccccagagtaggtca 834191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 1833625 - 1833666
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  1833625 atagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 7482295 - 7482254
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||| ||||||||||||||||||||||  |||||||||||    
T  7482295 atagtgaattggagagatcaatctctccttcagagtaggtca 7482254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 9109584 - 9109531
Alignment:
Q  194 aggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    ||||||||  |||||||| |||||||| |||| | |||||||||||||||||||    
T  9109584 aggagattgagaaaatggaagaaattaagtttttacttggagaacttgttgaag 9109531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 9987304 - 9987345
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  9987304 atagtggattggagagtacaatctctcctccagagtaggtca 9987345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 20622302 - 20622261
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  20622302 atagtggattggagagtacaatctctcctccagagtaggtca 20622261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 28220291 - 28220250
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  28220291 atagtggattggagagatcaatctctcccccagattaggtca 28220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 28265619 - 28265578
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  28265619 atagtggattggagagatcaatctctcccccagattaggtca 28265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 33775924 - 33775969
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||||| ||| ||||||||||||| |||||||||    
T  33775924 aaaatgatagaaattaggattgctcttggagaacttcttgaagcta 33775969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40282480 - 40282521
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  40282480 atagtggattggagagtacaatctctcctccagagtaggtca 40282521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 44203735 - 44203776
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  44203735 atagtggattggagagtacaatctctcctccagagtaggtca 44203776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 44455263 - 44455304
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  44455263 atagtggattggagagatcaatctctcccccagattaggtca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 50169275 - 50169234
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||| |||||||||||||||| ||||| |||||||    
T  50169275 atagtggattgaagagatcaatctctcccctagattaggtca 50169234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 2263039 - 2262971
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||||||| |||||||||||| |||  ||| ||||||||||||||  || ||||| ||||| ||||    
T  2263039 atagtggattgaagagatcaatctttcccttagggtaggtcattgttggtccgaactgagtaaacattt 2262971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 3156885 - 3156925
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  3156885 ggtagaaattagggttgttctttgtgaacttgttgaagcta 3156925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 3331403 - 3331505
Alignment:
Q  41 gagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgag 139  Q
    ||||||||  ||||| |||| ||  |||||||||| ||||||||||| ||| |||||| ||||||| ||| |||||||| |||| ||||| ||||||| |    
T  3331403 gagcaacttaggtgaatcttagggtaccaaaagaggagatccttaggaaatcaaaggctaagggtttgtt-tcttttgg-ggttggattctagagttggg 3331500  T
Q  140 aaaca 144  Q
    |||||    
T  3331501 aaaca 3331505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 8871211 - 8871175
Alignment:
Q  196 gagatttggaaaatggtagaaatta-ggtttgttctt 231  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8871211 gagatttggaaaatggtagaaattagggtttgttctt 8871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 37282755 - 37282715
Alignment:
Q  263 tagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  37282755 tagtggattggagagataaatctctcctttggagtaggtca 37282715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 37876831 - 37876795
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagta 298  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  37876831 atagtggattgcagagatcaatctctcctccagagta 37876795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 49918370 - 49918410
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  49918370 ggtagaaattagggttgttctttgtgaacttgttgaagcta 49918410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 21593491 - 21593724
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||| || |||||||||||||||||    
T  21593491 acacatgagtggagagtcatttttgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttt 21593589  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtag 214  Q
    ||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| |||||    
T  21593590 tgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggtag 21593688  T
Q  215 aaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||| |||||||| | || |||||||||||||    
T  21593689 aaattagggttgttctttgtgagcttgttgaagcta 21593724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 5043452 - 5043687
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||| ||||||||||||    
T  5043452 acacatgagtggagagtcttttgtgagcaatttgggtgagtcttgtgaaaccaaaagagaagatccttagtggaatcaaaggctaagagttggttctctt 5043551  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatg-gta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| |||   ||||||||   |||| ||| ||| ||||  |  ||||||  ||||||| |||    
T  5043552 ttgggggttagattctagagttgggaaacaattgtaaacaccttgtgagagtgaaaatcatgagtgtcttgttcattcg-tgagattgagaaaatgagta 5043650  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| | || |||||||||||||    
T  5043651 gaaattaggtttgttctttgtgagcttgttgaagcta 5043687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 603423 - 603278
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| || |||||||||||||    
T  603423 acacatgagtggagtgtcctttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctctt 603324  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||    
T  603323 ttgggggttagattctagagttgggaaacaattgtaaacaccttgg 603278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 17762814 - 17763050
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| ||||| |||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  17762814 acacatgagtggagagtcttttgggagcaacttgggtgagtcttgtgaaacaaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 17762913  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| ||||||| |||||||||| |||||| |||   ||||| ||||  |||| ||| ||| ||||  |  ||||||  |||||| |||    
T  17762914 ttgggggttagattctagagttgggaaacaattgtaaacactttgagagagtgaaaattcatgagtgtcttgttcat-tggtgagattgagaaaatgggt 17763012  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||||| | || |||||||||||||    
T  17763013 agaaattagggttgttctttgtgagcttgttgaagcta 17763050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 2973282 - 2973047
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||| || |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  2973282 acacatgaatgcagagtcatttgtgaacaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 2973183  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    || | | |||||||| ||||||| |||||||||| |||||| ||||  ||||||||   || | |||  || ||||  |  |||||| ||||||| ||||    
T  2973182 ttagggattagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcataagtgtcgtgttcat-tggtgagattgggaaaatgggta 2973084  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| | || |||||||||||||    
T  2973083 gaaattaggtttgttctttgtgagcttgttgaagcta 2973047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 3809051 - 3808897
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||||| | ||| |||||| ||||||||||||| ||    
T  3809051 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtaaaaccaaaagagaaaatccttagtgaaatcaaaggctaagggttggttct-tt 3808953  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  3808952 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 3808897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 26830455 - 26830231
Alignment:
Q  29 agagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttggaggttaga 127  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||| | ||| |||||| |||||||||||||||||||| |||||||    
T  26830455 agagtcatttgtgagcaacttgggcgagtcttgtgaaaccaaaagagaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttaga 26830356  T
Q  128 ttc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaaattaggttt 225  Q
    ||| |||||||  ||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| | ||||| ||||||||||||  ||    
T  26830355 ttctagagttggaaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcattgggtgagattggaaaaatgggtagaaattagagtt 26830256  T
Q  226 gttcttggagaacttgttgaagcta 250  Q
    |||||| | || |||||||||||||    
T  26830255 gttctttgtgagcttgttgaagcta 26830231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 25073457 - 25073628
Alignment:
Q  81 ccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaatt-gcaaacacattggttgagtgaaatcaatgaa 178  Q
    ||||||| |||||||||| |||||||| ||||||||||| |||||||||| ||||||| ||||||||| | |||||  |||| |||||||||||| |||     
T  25073457 ccttaggaaattaaaggctaagggttgattctcttttgggggttagattctagagttgggaaacaattgggaaacatcttgggtgagtgaaatcattgag 25073556  T
Q  179 tgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    | | ||| ||||| |||||||||   ||||||||||||||||| ||| ||||| | || |||||| ||||||    
T  25073557 tatcttgttcatgggaggagattgaaaaaatggtagaaattagatttattcttcgtgagcttgttaaagcta 25073628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 22425168 - 22425016
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||| ||| ||||||||||  ||||||||  ||| ||||||| ||||||||||||||| ||||||||| ||| ||| || |||||||||||||||||    
T  22425168 acacatgggtgaagagtcatttaagagcaacttcggttagtcttgtgaaaccaaaagagaatatccttaggaaatcaaa-gctaagggttggttctcttt 22425070  T
Q  117 tggaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    ||| |||||||||  ||||||| |||||||||| |||||| ||||  ||||||||    
T  22425069 tgg-ggttagattatagagttgggaaacaattgtaaacactttgggagagtgaaa 22425016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 17757909 - 17757973
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatc 81  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||    
T  17757909 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaacaaaaagagaagatc 17757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 26800689 - 26800748
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgg 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  26800689 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgg 26800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 22424892 - 22424831
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||||||    
T  22424892 tatagtggattggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggt 22424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 5043730 - 5043790
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||    
T  5043730 atagtagattggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggt 5043790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 5406265 - 5406205
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||||||    
T  5406265 atagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggt 5406205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 5410590 - 5410530
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||||||    
T  5410590 atagtggattggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggt 5410530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 3808773 - 3808731
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcat 304  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  3808773 atagtggattggagagatcaatctctcctccagagtaggtcat 3808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2973004 - 2972963
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  2973004 atagtggattggagagatcaatctctcctcaagagtaggtca 2972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 5409134 - 5409093
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  5409134 atagtggattggagagatcaatctctcctccagagtaggtca 5409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 5413459 - 5413418
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  5413459 atagtggattggagagatcaatctctcctccagagtaggtca 5413418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 5741120 - 5740975
Alignment:
Q  30 gagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagatt 129  Q
    ||||| ||||||||||| | |||||| ||||| ||||| ||||| ||||||||||||  ||| |||||| |||||||||||   ||| || |||||||||    
T  5741120 gagtcttttgtgagcaatttgggtgaatcttgagaaacaaaaagtgaagatccttagtaaatcaaaggctaagggttggttacttttggggggttagatt 5741021  T
Q  130 c-agagttgagaaacaatt-gcaaacacattggttgagtgaaatca 173  Q
    | | |||||  |||||||| | |||||| || | ||||||||||||    
T  5741020 ctaaagttggaaaacaattggaaaacaccttcggtgagtgaaatca 5740975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 21589034 - 21589075
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21589034 atagtggattggagagatcaatctctcctccagagtaggtca 21589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 21593767 - 21593808
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21593767 atagtggattggagagatcaatctctcctccagagtaggtca 21593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 9572694 - 9572757
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    ||||||||||| |||||||||||||| || |||||||||||||  ||||| | |||||||||||    
T  9572694 atagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaa 9572757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 186729 - 186771
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  186729 aaaatggtagaaataaggtttgttcttggagagcttgttgaag 186771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 31404740 - 31404702
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtagg 300  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31404740 atagtggattggagagatcaatctctcctccagagtagg 31404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2171597 - 2171556
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  2171597 atagtggattggagagttcaatctctcctccagagtaggtca 2171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 6097516 - 6097475
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  6097516 atagtggattggagagttcaatctctcctccagagtaggtca 6097475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 16452394 - 16452353
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  16452394 atagtggattggagagttcaatctctcctccagagtaggtca 16452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 16569125 - 16569166
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  16569125 atagtggattggagagatcaatctctcctccagattaggtca 16569166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 17758126 - 17758163
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtag 299  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17758126 atagtggattggagagatcaatctcccctctagagtag 17758163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 26830188 - 26830147
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  26830188 atagtggattggagagatcaatctctcctccaaagtaggtca 26830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 28137473 - 28137432
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  28137473 atagtggattggagagatcaatctctcccccagagtaggtca 28137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 30834601 - 30834560
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  30834601 atagtggattggagagttcaatctctcctccagagtaggtca 30834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 5406362 - 5406316
Alignment:
Q  196 gagatttggaaaatggtagaaattaggtttgttcttggagaacttgt 242  Q
    |||||| |||||||||||||||||||| |||||||| | ||||||||    
T  5406362 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgt 5406316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 5410687 - 5410641
Alignment:
Q  196 gagatttggaaaatggtagaaattaggtttgttcttggagaacttgt 242  Q
    |||||| |||||||||||||||||||| |||||||| | ||||||||    
T  5410687 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgt 5410641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 31404837 - 31404791
Alignment:
Q  196 gagatttggaaaatggtagaaattaggtttgttcttggagaacttgt 242  Q
    |||||| |||||||||||||||||||| |||||||| | ||||||||    
T  31404837 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgt 31404791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 33211251 - 33211209
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||| |||||||||||||||||||||||| | |||||||||||    
T  33211251 tataatggattggagagatcaatctctcccccagagtaggtca 33211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 412205 - 412246
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  412205 atagtggattagagagttcaatctctcctccagagtaggtca 412246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 3072824 - 3072783
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||| ||||||||| ||||||||||||| |||||||||||    
T  3072824 atagtgaattggagagttcaatctctcctccagagtaggtca 3072783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 291
Target Start/End: Complemental strand, 9183096 - 9183067
Alignment:
Q  262 atagtggattggagagatcaatctctcctc 291  Q
    ||||||||||||||||||||||||||||||    
T  9183096 atagtggattggagagatcaatctctcctc 9183067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 17763093 - 17763130
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtag 299  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  17763093 atagtggattggagtgatcaatctctcctccagagtag 17763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25421409 - 25421450
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  25421409 atagtggattggagagtacaatctctcctccagagtaggtca 25421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 26954351 - 26954310
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | | |||||||||    
T  26954351 atagtggattggagagatcaatctctcccccaaagtaggtca 26954310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 298
Target Start/End: Complemental strand, 33160414 - 33160381
Alignment:
Q  265 gtggattggagagatcaatctctcctctagagta 298  Q
    ||||||||||||||||||||||||||| ||||||    
T  33160414 gtggattggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 25073048 - 25073076
Alignment:
Q  56 gtcttgggaaaccaaaagagaagatcctt 84  Q
    |||||||||||||||||||||||||||||    
T  25073048 gtcttgggaaaccaaaagagaagatcctt 25073076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 8e-49; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 379204 - 379440
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  379204 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttaggaaatcaaaggctaagggttggttctcttt 379303  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa--tcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    ||  |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||  ||||| | | | ||| ||||  |  ||||||  |||||| |||    
T  379304 tgtgggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaattcaattagtatcttgttcatttg-tgagattgagaaaatgggt 379402  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||||||||| | || |||||||||||||    
T  379403 agaaattaggtttgttctttgtgagcttgttgaagcta 379440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 33989687 - 33989837
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| |||||| |||| || |||||||||    
T  33989687 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttttgaaaccaaaagagaagatccttaggtaatcaaaggctaaggatttgttctcttt 33989786  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacacattggttgagt 166  Q
    |||||||||||||| ||||||| ||||||| || |||||| ||||||||||    
T  33989787 tggaggttagattctagagttgggaaacaactgtaaacaccttggttgagt 33989837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 12073217 - 12073452
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||| | ||| ||| || ||||||||||||||||    
T  12073217 acacatgagtgaagagtcttttgtgagcaacttgggtgagtcttatgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctctt 12073316  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  | ||||||   |||| ||| ||||| ||  |  |||||| ||||||| ||||    
T  12073317 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagtgtgaaaatcatgagtgtcttgcttat-tggtgagattgggaaaatgggta 12073415  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| | || |||||||||||||    
T  12073416 gaaattaggtttgttctttgtgagcttgttgaagcta 12073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 50674189 - 50674034
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  50674189 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 50674090  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| |||||||  ||||||||| |||||| ||||  ||||||||    
T  50674089 ttgggggttagattctagagttggaaaacaattgtaaacaccttgggagagtgaaa 50674034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 55085708 - 55085473
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| | ||| |||||| |||||||| ||||| |    
T  55085708 acacatgagtggagagtcatttgtgagcaacttgtgtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcct 55085609  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| ||||||  |||||||||| |||||| |||| |||||| |||||| ||| ||| ||| ||||  |  |||| ||||||||| |||    
T  55085608 ttgggggttagattctagagttcggaaacaattgtaaacaccttgggtgagtgaaaatcattgactgtcttgttcat-tggtgaga-ttggaaaataggt 55085511  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||| | |||||||| | || |||||||||||||    
T  55085510 agaaattaaggttgttctttgtgagcttgttgaagcta 55085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 54882845 - 54883080
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||| |||||| |||||||| |||| |||||||||| | |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  54882845 acacatgagtgtagagtcttttgtgagaaacttgggtgagtctcgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 54882944  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  54882945 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 54883043  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| ||||| || | || |||||||||||||    
T  54883044 gaaattagggttgttttttgtgagcttgttgaagcta 54883080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 41964240 - 41964384
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  41964240 acacatgagtagagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 41964339  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||    
T  41964340 ttgg-ggttagattctagagttgggaaacaattgtaaacaccttgg 41964384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 26364090 - 26364222
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| ||| || ||||||||||||||||    
T  26364090 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctctt 26364189  T
Q  116 ttggaggttaga-ttcagagttgagaaacaatt 147  Q
    |||| ||||||| || ||||||| |||||||||    
T  26364190 ttggtggttagattttagagttgggaaacaatt 26364222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 35662267 - 35662405
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||| ||||||||  ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||| || |||||||||||||||||    
T  35662267 acacatgaatggagagttctttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-gctaagggttggttctcttt 35662365  T
Q  117 tggaggttagattc-agagttgagaaacaattgcaaacac 155  Q
    |||  ||||||||| ||||||| |||||||||| ||||||    
T  35662366 tgggtgttagattctagagttgggaaacaattgtaaacac 35662405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 8665232 - 8665468
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||  | | ||||||| ||||    
T  8665232 acacaggagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggttatgtgttggttttctt 8665331  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| ||||||||||  |||||| |||||||||| |||||| ||||  ||||| ||||  |||| ||| ||| ||||  |  |||| | ||||||| |||    
T  8665332 ttgggggttagattctggagttgggaaacaattgtaaacaccttggaagagtgaaaattcatgagtgtcttgttcat-tggtgagaatgggaaaatgggt 8665430  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||||| |||| |||||||||||||    
T  8665431 agaaattagggttgttctttgagagcttgttgaagcta 8665468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 6655781 - 6655936
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||   ||| |||||| || ||||| |||||||    
T  6655781 acacatgagtggagagtcatttctgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctt 6655880  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    || | |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  6655881 tttggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 6655936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 46703327 - 46703560
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttg 118  Q
    |||||| ||||||||| ||||| ||||||| |||||||||||| ||||||||||||||| ||||||||| ||| |||||| ||  |||||||||||||||    
T  46703327 acatgaatggagagtcttttgtcagcaacttgggtgagtcttgtgaaaccaaaagagaaaatccttaggaaatcaaaggctaaaagttggttctcttttg 46703426  T
Q  119 gaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatg-gtaga 215  Q
    | |||||||||  || |||| |||||||||| |||||| ||||  ||||| ||||  |||| ||| ||| ||||  |  |||||| |||||||| |||||    
T  46703427 ggggttagattatagtgttgggaaacaattgtaaacaccttgggagagtgaaaattcatgagtgtcttgttcat-tggtgagattgggaaaatgagtaga 46703525  T
Q  216 aattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| |||||||| | || |||||| ||||||    
T  46703526 aattagggttgttctttgtgagcttgtttaagcta 46703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 246
Target Start/End: Original strand, 32091324 - 32091534
Alignment:
Q  37 ttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagt 135  Q
    |||||| ||||| |||| ||| |||||| |||| | ||||||||||||||| ||| |||||| ||| ||||||||| |||||| ||| |||||| | |||    
T  32091324 ttgtgaacaacttgggtaagttttgggagaccagaggagaagatccttaggaaatcaaaggcaaagtgttggttcttttttgg-ggtaagattctaaagt 32091422  T
Q  136 tgagaaacaattgc-aaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttgga 234  Q
    |  ||||||||||  ||||||||||| |||| ||||||| ||| | | ||| ||||| ||| ||||| |||||||| |||||||||||||||||||||||    
T  32091423 ttggaaacaattgagaaacacattgggtgagcgaaatcattgagtctcttgttcatgggagaagattgggaaaatgctagaaattaggtttgttcttgga 32091522  T
Q  235 gaacttgttgaa 246  Q
    ||  ||||||||    
T  32091523 gagtttgttgaa 32091534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 50263041 - 50262886
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||   ||||| ||||| ||||||||||||||||| |||||| | ||| |||||| || |||||||||||||    
T  50263041 acacatgagtggagagtcttttgtgagcaacctcggtgactcttgtgaaaccaaaagagaagacccttagtgaaatcaaaggctaatggttggttctctt 50262942  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| ||||||| |||||||||| ||| || ||||  ||||||||    
T  50262941 ttgggggttagattctagagttgggaaacaattgtaaataccttgggagagtgaaa 50262886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 12119364 - 12119599
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||| ||||| || |||||||||||||| | ||||| |||||| ||||||||||||||||||||||| | |||  || |  |||||||||||||||||    
T  12119364 acacattagtggtgaatcatttgtgagcaatttgggtgtgtcttgtgaaaccaaaagagaagatccttaagaaatcgaa-gttaagggttggttctcttt 12119462  T
Q  117 tggaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatg-gta 213  Q
    ||| |||||||||  ||||||| |||||||||| ||| || ||||  ||||| |||||||||| ||| ||| |||| ||  |||||| | |||| | |||    
T  12119463 tgggggttagattatagagttgggaaacaattgtaaataccttgggagagtgaaaatcaatgagtgtcttgttcat-aggtgagattggaaaaaagagta 12119561  T
Q  214 gaaatta-ggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| ||||||||||| | |||||| |||||||||    
T  12119562 gaaattatggtttgttctttgtgaactttttgaagcta 12119599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 2209575 - 2209773
Alignment:
Q  54 gagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaattgcaa 151  Q
    |||||||| |||||||||||||||||||||||| | ||| |||||| | |||||||||||||||||| |||||||||| ||||||| |||| ||||| ||    
T  2209575 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctcttttgggggttagattctagagttgggaaataattgtaa 2209674  T
Q  152 acacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||||||||||| || ||||| | || |||||||||||||    
T  2209675 acaccttgggagagtgaaaatcatgagtgtcttgttcat-tgttgagattgggaaaatgggtagaaattagggtttttctttgtgagcttgttgaagcta 2209773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 40630809 - 40630879
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttagg 87  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  40630809 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagg 40630879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 41961264 - 41961468
Alignment:
Q  45 aactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaac 143  Q
    |||| ||||||||||||||| ||||||| |||| ||||||||| ||| ||| || |||||||||||||||||||  |||||||||| ||||||| |||||    
T  41961264 aacttgggtgagtcttgggagaccaaaaaagaatatccttaggaaatcaaaagctaagggttggttctcttttgagggttagattctagagttgggaaac 41961363  T
Q  144 aatt-------gcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggaga 236  Q
    ||||       | |||||| |||| ||| |||||||| ||| | | ||| |||||||| |||||| | ||||  |||||||||| |||||||| ||||||    
T  41961364 aattgggaaagggaaacaccttggctgattgaaatcattgagtctcttgttcatgagaagagattggaaaaagagtagaaattaagtttgttcatggaga 41961463  T
Q  237 acttg 241  Q
     ||||    
T  41961464 gcttg 41961468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 8647963 - 8648118
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||||||| | ||| ||| |  | | ||||||||||||    
T  8647963 acacaggagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaatgttatgtgttggttctctt 8648062  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| ||||||||||  |||||  ||||||| || |||||| ||||  ||||||||    
T  8648063 ttgggggttagattctggagttaggaaacaactgtaaacaccttggaagagtgaaa 8648118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 34112437 - 34112549
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||||| ||||||||||| || ||| |||||| ||| |||||  ||||||||||||| ||| |||||| || | ||||||||||||    
T  34112437 acacatgagtggagagtcatctgtgagcaacttggatgaatcttggaaaaacaaaactgaagatccttaggaaatcaaaggctaaagtttggttctcttt 34112536  T
Q  117 tggaggttagatt 129  Q
    |||| | ||||||    
T  34112537 tggaaggtagatt 34112549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 33089724 - 33089825
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||||||||||||||||||||||||           ||||| |||||||||||||||||||||  ||| |||||| || ||||||||||||||    
T  33089724 acacatgagtggagagtcatttgtgagcaact-----------tgggagaccaaaagagaagatccttagaaaatcaaaggctaaaggttggttctcttt 33089812  T
Q  117 tggaggttagatt 129  Q
    |||||||||||||    
T  33089813 tggaggttagatt 33089825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 26699786 - 26699634
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttg 118  Q
    ||||||||||||| ||||| |||| |||||  | |||||||| | |||| |||||||| |||| ||| ||||| |||||  || |||||||||||||||     
T  26699786 acatgagtggagattcattagtgaacaactcagatgagtcttagaaaactaaaagagatgatctttatgtaatcaaaggttaaaggttggttctctttta 26699687  T
Q  119 gaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    | |||||||||  | ||||| |||||||||| |||||| |||| |||||||||    
T  26699686 ggggttagattataaagttgggaaacaattgtaaacactttgggtgagtgaaa 26699634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 40632354 - 40632505
Alignment:
Q  100 aagggttggttctcttttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggag 198  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||    
T  40632354 aagggttggttctcttttgggggttagattctagagttgagaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgag 40632452  T
Q  199 atttggaaaat-ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||| ||||||| ||||||||||||  |||||||| | || |||||||||||||    
T  40632453 attgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagcta 40632505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 379483 - 379541
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgg 320  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  379483 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgg 379541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 46703603 - 46703664
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||    
T  46703603 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggt 46703664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 3785926 - 3786017
Alignment:
Q  27 ggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    |||||||| ||||||||||| | | | ||||||||||| |||||||||||| ||||||||| ||| |||||| ||| ||||||||||||||||    
T  3785926 ggagagtc-tttgtgagcaaattgtgcgagtcttgggagaccaaaagagaatatccttaggaaatcaaaggctaagagttggttctcttttgg 3786017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 27417271 - 27417165
Alignment:
Q  50 gggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttggaggttagattc-agagttgagaaacaatt 147  Q
    ||||||||||||  ||||||||| ||||||||||||| | ||| |||| | |||||||||||||||||||| ||||||||||  |||||  |||||||||    
T  27417271 gggtgagtcttgtaaaaccaaaaaagaagatccttagtgaaatcaaagactaagggttggttctcttttgggggttagattcttgagttttgaaacaatt 27417172  T
Q  148 gcaaaca 154  Q
    | |||||    
T  27417171 gtaaaca 27417165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 2209817 - 2209877
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||    
T  2209817 atagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaactgggt 2209877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 12073495 - 12073551
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaact 318  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| ||| ||||    
T  12073495 atagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaact 12073551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 26699508 - 26699432
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttattagtg 337  Q
    |||| ||||||||||||||||||||||   | ||||||||||||||||| ||| ||||||||||| |||| ||||||    
T  26699508 tataatggattggagagatcaatctctatcccagagtaggtcattgttggaccgaactgggtaaaaatttcttagtg 26699432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 48143146 - 48143206
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| |||||||||||   ||| ||||||||||||    
T  48143146 atagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggt 48143206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 22883077 - 22882994
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    ||||||||||| | ||| ||||||| ||| |||||||||||||||||||||  ||| |||||  || |||||||||||||||||    
T  22883077 tttgtgagcaatttgggcgagtcttaggagaccaaaagagaagatccttagaaaatcaaaggataatggttggttctcttttgg 22882994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 22934741 - 22934658
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    ||||||||||| | ||| ||||||| ||| |||||||||||||||||||||  ||| |||||  || |||||||||||||||||    
T  22934741 tttgtgagcaatttgggcgagtcttaggagaccaaaagagaagatccttagaaaatcaaaggataatggttggttctcttttgg 22934658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 33089982 - 33090029
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttg 309  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  33089982 atagtggattagagagatcaatctctcctctagagtaggttattgttg 33090029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 35370669 - 35370576
Alignment:
Q  27 ggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggag 121  Q
    |||||||| ||||| ||||||| ||||||||||  ||| ||||||| |||||||| || || ||| |||||| || |||||||||||||||||||    
T  35370669 ggagagtc-tttgtaagcaacttgggtgagtctatggataccaaaatagaagatctttgggaaatcaaaggctaatggttggttctcttttggag 35370576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 44968049 - 44967939
Alignment:
Q  139 gaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattagg-tttgttcttggagaa 237  Q
    |||||| ||| ||||| |||||||||||||||||| |||   | ||| || || || |||||| |||||||||||||||||||| |||| |||||||||     
T  44968049 gaaacatttgtaaacaaattggttgagtgaaatcattgagcctgttgttcttgggaagagattgggaaaatggtagaaattaggttttgctcttggagag 44967950  T
Q  238 cttgttgaagc 248  Q
    |||| ||||||    
T  44967949 cttgctgaagc 44967939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8665511 - 8665552
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  8665511 atagtggattggagagatcaatctctcctccagagtaggtca 8665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 12119642 - 12119698
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaact 318  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||||    
T  12119642 tatagtggattggagagatcaatctctcc-caagagtaggtcattgttggaccgaact 12119698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 29999871 - 29999830
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  29999871 atagtggattggagagatcaatctctcctccagagtaggtca 29999830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 41639529 - 41639570
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  41639529 atagtggattggagagatcaatctctcctccagagtaggtca 41639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 41964519 - 41964560
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  41964519 atagtggattggagagatcaatctctcctccagagtaggtca 41964560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 50673912 - 50673871
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  50673912 atagtggattggagagatcaatctctcctccagagtaggtca 50673871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 56178702 - 56178661
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  56178702 atagtggattggagagatcaatctctcctccagagtaggtca 56178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 8648246 - 8648301
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||    
T  8648246 tggattggagagatcaatctctcctccagagtaggtca-agttggaccaaactgggt 8648301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 33989948 - 33990016
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||| |   ||||||||||| ||||    
T  33989948 atagtggattggagagatcaatctctccaccagagtaggtcattcttggattgaactgggtaaacattt 33990016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 40632548 - 40632615
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||||||||||||||||| |||| ||||  |||| ||| ||||||||||| ||||    
T  40632548 atagtggattggagagatcaatctctcctctaaagtaagtca-agttggaccgaactgggtaaacattt 40632615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 50262766 - 50262706
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||||||||| ||| ||||||||    
T  50262766 atagttgattggagatatcaatctttcctccagagtaggtcattgttggaccgaactgggt 50262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 6677412 - 6677529
Alignment:
Q  134 gttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattagg--tttgttctt 231  Q
    |||| |||||| ||| ||||||||||| |||||||||| | ||| | | ||| || || || || ||| ||||||||||||||||||||  ||| |||||    
T  6677412 gttgggaaacatttgtaaacacattggatgagtgaaataattgagtctcttgttcttgggaagaaatt-ggaaaatggtagaaattaggttttttttctt 6677510  T
Q  232 ggagaacttgttgaagcta 250  Q
    ||||| |||||||||||||    
T  6677511 ggagagcttgttgaagcta 6677529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 52095427 - 52095389
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtagg 300  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  52095427 atagtggattggagagatcaatctctcctccagagtagg 52095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 6656059 - 6656100
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  6656059 atagtggattggagagatcaatctctcatccagagtaggtca 6656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 13992358 - 13992317
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  13992358 atagtggattggagagttcaatctctcctccagagtaggtca 13992317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 35662544 - 35662585
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  35662544 atagtggattggagagatcaatatctcctcaagagtaggtca 35662585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 6542244 - 6542177
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||||||||||||| | || ||||||||  |||| ||| ||||||||||| ||||    
T  6542244 atagtggattggagagatcaatctctcccccagggtaggtca-agttggaccgaactgggtaaacattt 6542177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 34788930 - 34788886
Alignment:
Q  203 ggaaaatggtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  34788930 ggaaaatggtagaaattaggattgctcttggagagcttgttgaag 34788886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 9927621 - 9927566
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  9927621 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 9927566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 26364241 - 26364296
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  26364241 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 26364296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 34570577 - 34570522
Alignment:
Q  196 gagatttggaaaat-ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||| ||||||||||||| |||||||| | ||||||||||||||||    
T  34570577 gagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagcta 34570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 35369763 - 35369681
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    ||||| ||||||| ||||||||||  ||| | ||||| |||||||| || || ||| |||||| ||||||||||||||||||||    
T  35369763 tttgtaagcaacttgggtgagtctatggatagcaaaatagaagatctttggg-aatcaaaggctaagggttggttctcttttgg 35369681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 54200069 - 54200014
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  54200069 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 54200014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 33089900 - 33089938
Alignment:
Q  212 tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  33089900 tagaaattatgtttgttcttggagagcttgttgaagcta 33089938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 5370148 - 5370107
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||| | ||||||||||||||||||| |||||||||||    
T  5370148 atagtggactagagagatcaatctctcctccagagtaggtca 5370107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 7125005 - 7125046
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  7125005 atagtggattggagagtacaatctctcctccagagtaggtca 7125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8393497 - 8393538
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  8393497 atagtggattggagagtacaatctctcctccagagtaggtca 8393538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8395706 - 8395747
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  8395706 atagtggattggagagtacaatctctcctccagagtaggtca 8395747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 9927523 - 9927482
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  9927523 atagtggattggagagatcaatctctcccccagattaggtca 9927482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 12739615 - 12739574
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  12739615 atagtggattggagagatcaatctctcccccagattaggtca 12739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 26175701 - 26175660
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  26175701 atagtggattggagagatcaatctctcccccagattaggtca 26175660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 26364339 - 26364380
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  26364339 atagtggattggagagatcaatctctcccccagattaggtca 26364380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 27417030 - 27416989
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  27417030 atagtggattggagagatcaatctctcccccagattaggtca 27416989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 27994835 - 27994871
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgt 242  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27994835 aaaatggtagaaattagg-ttgttcttggagaacttgt 27994871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 31495381 - 31495340
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||| |||||||||| ||||||||||||| |||||||||||    
T  31495381 atagttgattggagagttcaatctctcctccagagtaggtca 31495340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 44570519 - 44570478
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaa 246  Q
    |||||||||||||||| ||||||| ||||||| |||||||||    
T  44570519 aaaatggtagaaattatgtttgttgttggagagcttgttgaa 44570478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 47038476 - 47038435
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | |||||| ||||    
T  47038476 atagtggattggagagatcaatctctcccccagagtaagtca 47038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 48143058 - 48143103
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||||| |||||||| | ||||||||||||||||    
T  48143058 aaaaaggtagaaattagggttgttctttgtgaacttgttgaagcta 48143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 48893703 - 48893662
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  48893703 atagtggattggagagatcaatctctcccccagattaggtca 48893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 52467419 - 52467378
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  52467419 atagtggattggagagatcaatctctccccgagattaggtca 52467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 56178790 - 56178745
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||||| |||||||| | ||||||||||||||||    
T  56178790 aaaagggtagaaattagggttgttctttgtgaacttgttgaagcta 56178745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 3913551 - 3913586
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagta 298  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3913551 atagtggattggagagatcaatctctcc-ctagagta 3913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 5349930 - 5349970
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||||||| | |||||||| |||||||    
T  5349930 ggtagaaattaggtttgttctttgtgaacttgtcgaagcta 5349970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 289
Target Start/End: Complemental strand, 37229787 - 37229759
Alignment:
Q  261 tatagtggattggagagatcaatctctcc 289  Q
    |||||||||||||||||||||||||||||    
T  37229787 tatagtggattggagagatcaatctctcc 37229759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 46569885 - 46569821
Alignment:
Q  21 atgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatcctta 85  Q
    ||||||||| |||| ||||||| |||||  ||||| ||||  |||||||||||||||| ||||||    
T  46569885 atgagtggaaagtcttttgtgaacaacttaggtgaatcttatgaaaccaaaagagaaggtcctta 46569821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 52467502 - 52467462
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||||||| | || |||||||||||||    
T  52467502 ggtagaaattaggtttgttctttgtgagcttgttgaagcta 52467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 44353617 - 44353853
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||||  |||||||||| |||||||||||| |||||||||||| ||||| ||||| | ||| |||||| ||||||||||||||||    
T  44353617 acacatgagtggagagtcatcggtgagcaacttgggtgagtcttgtgaaaccaaaagaaaagattcttagtgaaatcaaaggctaagggttggttctctt 44353716  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagt-gaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| ||||||| |||||||||| ||||||||||| |||||  |||||| ||| | | ||| ||||  |  |||||| ||||||| |||    
T  44353717 ttgggggttagattctagagttgggaaacaattgtaaacacattgggtgagtaaaaatcattgagtatcttgttcatttg-tgagattgggaaaatgggt 44353815  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||||| | ||||||||||||||||    
T  44353816 agaaattagggttgttctttgtgaacttgttgaagcta 44353853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 40328604 - 40328820
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||| | ||| |||||| | | ||||||||||||    
T  40328604 acacatgagtgtagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatctttagtgaaatcaaaggctatgagttggttctctt 40328703  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||  ||||  ||||||||   |||||||| ||| ||||  |  |||||| ||||||| ||||    
T  40328704 ttgggggttagattctagagttgggaaacaattgtaaacatcttgggagagtgaaaatcatgaatgtcttgttcatttg-tgagattgggaaaatgggta 40328802  T
Q  214 gaaattaggtttgttctt 231  Q
    ||||||||||||||||||    
T  40328803 gaaattaggtttgttctt 40328820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 4283349 - 4283584
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||| |||| |||||||| |||| || ||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  4283349 acacatgagtggaaagtcttttgtgagaaacttggttgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 4283448  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| || |  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  4283449 ttgggggttagattctagagttgggaaacaattgtaaacaccttaggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 4283547  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| ||||| || | || |||||||||||||    
T  4283548 gaaattagggttgttttttgtgagcttgttgaagcta 4283584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 11383813 - 11384045
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctttt 117  Q
    |||| |||||| |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||    
T  11383813 acataagtggaaagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctttt 11383912  T
Q  118 ggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtaga 215  Q
    || |||||||||| ||||||| |||| ||||| |||||| ||||  ||||||||   |||| ||| ||| ||||   | |||||| | ||||| ||||||    
T  11383913 gggggttagattctagagttgggaaataattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat--tatgagattggaaaaatgggtaga 11384010  T
Q  216 aattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| |||||||| | ||  ||||||||||||    
T  11384011 aattagggttgttctttgtgagtttgttgaagcta 11384045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 40221570 - 40221725
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| |||||||||||||  |||||||||||  ||||||||||||||||||||||| | ||| |||||| || |||||||||||||    
T  40221570 acacatgagtggagagtcttttgtgagcaacttaggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctctt 40221669  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  40221670 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 40221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 42435330 - 42435099
Alignment:
Q  21 atgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttgg 119  Q
    |||| ||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||     
T  42435330 atgaatggagagtcttttgtgagcaacttgagtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttga 42435231  T
Q  120 aggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaaa 217  Q
     |||||||||| |||||||  ||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| | ||||| ||||||||    
T  42435230 gggttagattctagagttggtaaacaattgtaaacactttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattggaaaaatgggtagaaa 42435132  T
Q  218 ttaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||| |||||||| | || |||||||||||||    
T  42435131 ttagggttgttctttgtgagcttgttgaagcta 42435099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 250
Target Start/End: Original strand, 18655246 - 18655460
Alignment:
Q  37 ttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctcttttggaggttagattc-agag 134  Q
    ||||||||||||  ||||||||||| |||| ||||||||||||||||||| | ||| |||||| |||||||| | ||||||||| |||||||||| |||     
T  18655246 ttgtgagcaacttcggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttgatactcttttgg-ggttagattctagac 18655344  T
Q  135 ttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtagaaattaggtttgttcttgg 233  Q
    ||  |||||||||| |||||| ||||  ||||||||   |||| ||||||| ||||  |  ||||||  |||||| ||||||||||| | |||||||| |    
T  18655345 ttaggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgttttgttcat-tggtgagattgagaaaatgggtagaaattaaggttgttctttg 18655443  T
Q  234 agaacttgttgaagcta 250  Q
     || |||||||||||||    
T  18655444 tgagcttgttgaagcta 18655460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 40585561 - 40585652
Alignment:
Q  27 ggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    |||||||| ||||||||||| | |||||||| |||| | |||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  40585561 ggagagtc-tttgtgagcaatttgggtgagtattggtagaccaaaagagaagatccttaggaaatcaaagactaagggttggttctcttttgg 40585652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 7597718 - 7597789
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttatt 333  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||  ||| |||||| ||||||||||||    
T  7597718 atagtggattggagagatcaatctctcccccatagtaggtcattgttagaccgaactggataaatatttatt 7597789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 34254396 - 34254355
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34254396 atagtggattggagagatcaatctctcctctagagtaggtca 34254355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 34256572 - 34256531
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34256572 atagtggattggagagatcaatctctcctctagagtaggtca 34256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 4283627 - 4283668
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  4283627 atagtggattggagagatcaatctcccctctagagtaggtca 4283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 9633869 - 9633816
Alignment:
Q  28 gagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatc 81  Q
    ||||||||||||||||||||| |||||| |||| |||||||||| |||||||||    
T  9633869 gagagtcatttgtgagcaacttgggtgaatcttaggaaaccaaacgagaagatc 9633816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 42498297 - 42498338
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42498297 atagtggattggagagatcaatctctcctccagagtaggtca 42498338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 19945424 - 19945364
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||| ||||||||||||| |||||||||||   ||||||| ||||||||    
T  19945424 atagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggt 19945364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 33655628 - 33655548
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    ||||||||||| | |||||| |||| ||| | |||||||||||||||||||  ||| |||||  |||||||||||||||||    
T  33655628 tttgtgagcaatttgggtgaatcttaggagaacaaaagagaagatccttagaaaatcaaaggttaagggttggttctcttt 33655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 18141923 - 18141981
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactggg 321  Q
    |||||||||||||||||||||||||||| ||||| |||||||  |||| |||||||||||    
T  18141923 atagtggattggagagatcaatctctcccctagattaggtca-agttggaccaaactggg 18141981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 40328883 - 40328922
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  40328883 atagtggattggagagatcaatctctcctccagagtaggt 40328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 2627839 - 2627880
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  2627839 atagtggattggagagttcaatctctcctccagagtaggtca 2627880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17982756 - 17982797
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  17982756 atagtggattggagagttcaatctctcctccagagtaggtca 17982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 29796386 - 29796317
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||| |||||||||||||||||||||||| | |  |||||||||||||| ||| |||| |||||| ||||    
T  29796386 tataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaacattt 29796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 42435056 - 42435015
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  42435056 atagtggattggagaaatcaatctctcctccagagtaggtca 42435015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 44303958 - 44303999
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  44303958 atagtggattggagagttcaatctctcctccagagtaggtca 44303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 4162517 - 4162557
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  4162517 ggtagaagttaggtttgttctttgagaacttgttgaagcta 4162557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 29796491 - 29796431
Alignment:
Q  190 tgagaggagatttggaaaatggtagaaatta-ggtttgttcttggagaacttgttgaagct 249  Q
    ||||| |||||| ||||||  |||||||| | |||||||||||||||||||||||||||||    
T  29796491 tgagaagagattgggaaaagagtagaaatcaaggtttgttcttggagaacttgttgaagct 29796431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 15212791 - 15212846
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  15212791 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 15212846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 11137039 - 11137085
Alignment:
Q  204 gaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||||    
T  11137039 gaaaatggtagaaattaagtatgtccttgaagaacttgttgaagcta 11137085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 32902238 - 32902188
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaac 312  Q
    |||||| ||| ||||||||||||||||| |  |||||||||||||||||||    
T  32902238 atagtgaatttgagagatcaatctctccccctgagtaggtcattgttgaac 32902188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 41266982 - 41267024
Alignment:
Q  204 gaaaatggtagaaattagg-tttgttcttggagaacttgttga 245  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  41266982 gaaaatggtagaaattaggttttgttcttagagaacttgttga 41267024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 41366680 - 41366639
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  41366680 tatagtggattggagagatcaatctctcc-ctagattaggtca 41366639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 1746284 - 1746243
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| | |||||||||    
T  1746284 atagtggattggagagttcaatctctcctccatagtaggtca 1746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3439606 - 3439647
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  3439606 atagtggattggagagtacaatctctcctccagagtaggtca 3439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 3772295 - 3772362
Alignment:
Q  262 atagtggattggagagatcaatctctc-ctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||||||||||||||||| || ||| |||||||||||  |||| |||||||||| |||||||||    
T  3772295 atagtggattggagagatcaatctatctctc-agagtaggtca-agttggaccaaactggataaatattt 3772362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4743279 - 4743238
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | | |||||||||    
T  4743279 atagtggattggagagatcaatctctcccccaaagtaggtca 4743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 10930264 - 10930223
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  10930264 atagtggattggagagatcaatctctcccccagattaggtca 10930223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 12702695 - 12702658
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  12702695 tggattggagagatcaatctctcccctagattaggtca 12702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 12702787 - 12702742
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||||| |||||||| | ||||||||||||||||    
T  12702787 aaaagggtagaaattagggttgttctttgtgaacttgttgaagcta 12702742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 18655503 - 18655544
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||||||||||||||||| | |||||||||    
T  18655503 atagtggattagagagatcaatctctcctccaaagtaggtca 18655544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 31218360 - 31218401
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  31218360 atagtggattagagagttcaatctctcctccagagtaggtca 31218401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 33352253 - 33352294
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  33352253 atagtggattggagagatcaatctctcccccagattaggtca 33352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40221848 - 40221889
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  40221848 atagtggattggagagatcaatctctcccccagattaggtca 40221889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 40321183 - 40321224
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  40321183 atagtggattggagagatcaatctctcccccagattaggtca 40321224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 42498209 - 42498254
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||||| |||||||| | ||||||||||||||||    
T  42498209 aaaaaggtagaaattagggttgttctttgtgaacttgttgaagcta 42498254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 43036526 - 43036567
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||||||||||||||||| ||| |||||||    
T  43036526 atagtggatttgagagatcaatctctcctccagattaggtca 43036567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 11712065 - 11711997
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||||||| ||||||||||||||||   | |||||||||||||||  || || |||||||| ||||    
T  11712065 atagtggattgaagagatcaatctctccctcaaagtaggtcattgttggtcctaattgggtaaacattt 11711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 32902370 - 32902282
Alignment:
Q  162 tgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||| ||| | | ||| |||||||||||||||   |||  ||||||||||| |||||||| ||||||   |||||||||||    
T  32902370 tgagtgaaatcattgagtctcttgatcatgagaggagattgataaatgggtagaaattatgtttgttcatggagactctgttgaagcta 32902282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 2361314 - 2361080
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  2361314 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttatgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 2361215  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    || |||||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  2361214 tt-gaggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 2361117  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  2361116 gaaattagggttgttctttgtgagcttgttgaagcta 2361080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 34311059 - 34310824
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| || |||||||||||||    
T  34311059 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctctt 34310960  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||| ||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  34310959 ttgggggttagattctagagttgggaaataattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattgggaaaatgggta 34310861  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | ||| ||||||||||||    
T  34310860 gaaattagggttgttctttgtgaaattgttgaagcta 34310824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 6431796 - 6432031
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| ||| || ||||||||||||||||    
T  6431796 acacatgagtgtagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctctt 6431895  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||  |||||||||| ||||||| |||||||||| |||||||||||  ||||||||   |||| ||| ||| ||||  |   ||||| ||||||| ||||    
T  6431896 ttgagggttagattctagagttgggaaacaattgtaaacacattgggagagtgaaaatcatgagtgtcttgttcat-tggttagattgggaaaatgggta 6431994  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  6431995 gaaattaggattgttctttgtgagcttgttgaagcta 6432031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 4512733 - 4512578
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||| ||||||||    
T  4512733 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctctt 4512634  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    |||| ||||| |||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  4512633 ttgggggttatattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 4512578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 48599675 - 48599442
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctttt 117  Q
    |||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||    
T  48599675 acatgagtagagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctttt 48599576  T
Q  118 ggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggtaga 215  Q
    || ||||| |||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  || ||| ||||||| ||||||    
T  48599575 gggggttatattctagagttgggaaacaattgtaaacaccttggaggagtgaaaatcatgattgtcttgttcat-tggtgatattgggaaaatgggtaga 48599477  T
Q  216 aattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| |||||||| | || |||||||||||||    
T  48599476 aattagggttgttctttgtgagcttgttgaagcta 48599442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 2390107 - 2390252
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  2390107 acacatgagtggatagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 2390206  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||    
T  2390207 ttgggggttagattctagagttgggaaacaattgtaaacaccttgg 2390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 6360255 - 6360110
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  6360255 acacatgagtggagagtcatttgtgagcaacttgggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 6360156  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||| |||||||||| ||||||| |||||||||  |||||| ||||    
T  6360155 ttgggggttagattctagagttgggaaacaattttaaacaccttgg 6360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 29608561 - 29608701
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||| ||||| | ||| |||||| ||||||||||||||||    
T  29608561 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaatagaagattcttagtgaaatcaaaggctaagggttggttctctt 29608660  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacac 155  Q
    |||| |||||||||| ||||||| |||||||||| ||||||    
T  29608661 ttgggggttagattctagagttgggaaacaattgtaaacac 29608701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 4509049 - 4508814
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||||| | ||| |||||| |||| |||||||||||    
T  4509049 acacatgagtggagagtcatttgtgagcaactttggtgagtcttgtgaaaccaaaagataagatccttagtgaaatcaaaggctaaggattggttctctt 4508950  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatg-gta 213  Q
    ||   |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| | ||  |  |||||| |||||||| |||    
T  4508949 ttatgggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttgat-tggtgagattgggaaaatgagta 4508851  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || ||| |||||||||    
T  4508850 gaaattagggttgttctttgtgagcttattgaagcta 4508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 4510891 - 4510736
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||| | ||| |||||| || | |||||||||||    
T  4510891 acacatgagtggagagtcatttgtgagcaactttggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaacgattggttctctt 4510792  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    ||   |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  4510791 ttatgggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 4510736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 3258825 - 3258964
Alignment:
Q  21 atgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgga 120  Q
    |||||||||||||| ||| | ||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||  | |||||||||||||| |||||     
T  3258825 atgagtggagagtcttttattagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttaggaaatcaaa-cctaagggttggttctcatttggg 3258923  T
Q  121 ggttagattc-agagttgagaaacaattgcaaacacattgg 160  Q
    |||||||||| ||||||| |||||||||| |||||| ||||    
T  3258924 ggttagattctagagttgggaaacaattgtaaacaccttgg 3258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 22328739 - 22328601
Alignment:
Q  19 acatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctctttt- 117  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||| ||||| ||| || ||||||||||||||||||     
T  22328739 acatgagtagagagtcatttgtgagcaacttgggtgaatcttgggaaactaaaagagaatatccttatgtaatcaaaagctaagggttggttctcttttg 22328640  T
Q  118 ggaggttagattc-agagttgagaaacaattgcaaacac 155  Q
    || |||||||| | | ||||| |||||||||| ||||||    
T  22328639 gggggttagatcctaaagttgggaaacaattgtaaacac 22328601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 22269798 - 22270033
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||||  ||| ||| |||| |||||||||||| |||||||||| ||||||||||||| | ||| | |||| | ||||||||||||||    
T  22269798 acacatgagtggagagtctattgagagaaacttgggtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcataggctatgggttggttctctt 22269897  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| |||||||||| ||||||| |||||||||  |||||| ||||  ||||| ||||  |||| ||| ||| ||||  |  |||||| ||||||| |||    
T  22269898 ttgggggttagattctagagttg-gaaacaattctaaacaccttgggagagtgaaaattcatgagtgtcttgttcat-tggtgagattgggaaaatgggt 22269995  T
Q  213 agaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||| |||||||| | || |||||||||||||    
T  22269996 agaaattagggttgttctttgtgagcttgttgaagcta 22270033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 36 - 248
Target Start/End: Complemental strand, 1360478 - 1360263
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggagg-ttagattc-aga 133  Q
    |||| |||||||| | ||||||||||| |||||||||||||| ||  || || ||| |||||  | || ||||||||||||||| || |||||||| |||    
T  1360478 tttgcgagcaacttgagtgagtcttggaaaaccaaaagagaatatttttgggaaatcaaaggatatggattggttctcttttggggggttagattctaga 1360379  T
Q  134 gttgagaaacaattgc-aaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttg 232  Q
    ||||| |||||||||  |||||| || | |||||||||||| ||| | | ||| |||||  | |||||| |||||| ||||||||||||||||  |||||    
T  1360378 gttgaaaaacaattgggaaacacctttggtgagtgaaatcattgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttgtcttg 1360279  T
Q  233 gagaacttgttgaagc 248  Q
    ||||||||||||||||    
T  1360278 gagaacttgttgaagc 1360263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 8359661 - 8359444
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||| |||||||| | ||| |||||| ||| ||||||| | ||    
T  8359661 acacatgagtggagagtcttttgtgagcaacttggatgagtcttgtgaaaccaaaagagaaaatccttagtgaaatcaaaggctaagagttggttatttt 8359562  T
Q  116 ttggagg-ttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggt 212  Q
    |||| || ||||||||  ||||||  ||||||||| |||||| |||   ||||||||   |||| ||| ||| ||||  | ||||||| ||||||| |||    
T  8359561 ttgggggtttagattcttgagttggaaaacaattgtaaacaccttgagagagtgaaaatcatgagtgtcttgttcat-tggggagattgggaaaatgggt 8359463  T
Q  213 agaaattaggtttgttctt 231  Q
    |||||||||| || |||||    
T  8359462 agaaattagggtttttctt 8359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 22328455 - 22328387
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  22328455 atagtggatttgagagatcaatctctcccctagagtaggtcattgttggaccgaactgggtaaatattt 22328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 8359381 - 8359321
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  8359381 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggt 8359321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 3259098 - 3259157
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggt 322  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||    
T  3259098 atagtggattggagagatcaatctctcctccagagtaggtca-agttgaaccgaactgggt 3259157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 18396421 - 18396484
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    |||| ||||||||||||||||||||||||| ||||||||||| || || ||| |||||||||||    
T  18396421 atagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaa 18396484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 43363629 - 43363586
Alignment:
Q  203 ggaaaatggtagaaattaggtttgttcttggagaacttgttgaa 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  43363629 ggaaaatggtagaaattaggtttgttcttggagagcttgttgaa 43363586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 2390384 - 2390426
Alignment:
Q  261 tatagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  2390384 tatagtggattggagagatcaatctctcctccagagtaggtca 2390426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 22270076 - 22270117
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  22270076 atagtggattggagagatcaatctctcctccagagtaggtca 22270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 23555143 - 23555184
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  23555143 atagtggattggagagatcaatctctcctccagagtaggtca 23555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 29991156 - 29991197
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  29991156 atagtggattggagagatcaatctctcctccagagtaggtca 29991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 32358119 - 32358078
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  32358119 atagtggattggagagatcaatctctcctccagagtaggtca 32358078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 34310781 - 34310740
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  34310781 atagtggattggagagatcaatctctcctccagagtaggtca 34310740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 43363737 - 43363667
Alignment:
Q  37 ttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttg 107  Q
    |||||||||| | |||||| ||||| || |||||||||||||||| ||||| ||||||| || ||||||||    
T  43363737 ttgtgagcaatttgggtgaatcttgagagaccaaaagagaagatctttaggaaattaaatgctaagggttg 43363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 496048 - 496007
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  496048 atagtggattggagagatcaatctctcccctatagtaggtca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 5116475 - 5116540
Alignment:
Q  32 gtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaagg 97  Q
    |||||||||||  ||||  ||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  5116475 gtcatttgtgataaacttaggtgagtcttgggtaaccaaaagagaagatcctcaggaaatcaaagg 5116540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 5116564 - 5116661
Alignment:
Q  150 aaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaag 247  Q
    |||||||||||  | ||||||||| ||| | | ||| | ||| ||||||||| ||||||  |||||||||||||||||||||||| |  |||||||||    
T  5116564 aaacacattgggcgggtgaaatcattgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggtttgttcttggatagtttgttgaag 5116661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 6432074 - 6432115
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  6432074 atagtggattggagagatcaatctctccttcagagtaggtca 6432115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 14379926 - 14379885
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  14379926 atagtggattggagagatcaatctctcccctagattaggtca 14379885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 19502281 - 19502322
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  19502281 atagtggattggagagatcaatctctcctccagagtaagtca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 23555055 - 23555100
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||    
T  23555055 aaaatggtagaaattagggttgttctttgtgaacttgttgaagcta 23555100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 23565126 - 23565085
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  23565126 atagtggattggagagatcaatctctctcctagagtaggtca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 25615956 - 25615997
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  25615956 atagtggattagagagatcaatctctcctccagagtaggtca 25615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 25767025 - 25766984
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  25767025 atagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 35854017 - 35854058
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  35854017 atagtggattggagagttcaatctctcctccagagtaggtca 35854058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 39731472 - 39731513
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  39731472 atagtggattggagagttcaatctctcctccagagtaggtca 39731513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 4586166 - 4586221
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  4586166 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 4586221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 26639432 - 26639491
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    |||||| ||||||||||||||||||| | |||| |||||||||| ||| |||||| ||||    
T  26639432 tggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaa 26639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 27347822 - 27347877
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  27347822 gagattgggaaaatgggtagaaattaggattgttctttgtgaacttgttgaagcta 27347877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 48489436 - 48489491
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| || |||||||||||||||    
T  48489436 gagattgggaaaatgggtagaaattagggttgttctttgaaaacttgttgaagcta 48489491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 48489534 - 48489596
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    |||||||||||||||||||||||||||| | ||| |||||||  |||| ||| |||||||||||    
T  48489534 atagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtaaa 48489596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 48491584 - 48491639
Alignment:
Q  196 gagatttggaaaatgg-tagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||| ||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  48491584 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagcta 48491639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 1560731 - 1560669
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaa 324  Q
    ||||||||||||||||  |||||||||||| |||||||||||   ||| ||| ||||||||||    
T  1560731 atagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaa 1560669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Complemental strand, 48599399 - 48599365
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagag 296  Q
    |||||||||||||||||||||||||||||| ||||    
T  48599399 atagtggattggagagatcaatctctcctccagag 48599365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 3904844 - 3904751
Alignment:
Q  132 gagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggttt 225  Q
    ||||| ||||||| ||| |||||| ||||  ||||||||||| ||| | | ||| || |  || |||||| |||||||||||||||||||||||    
T  3904844 gagttaagaaacatttgtaaacaccttgggcgagtgaaatcattgagtctcttgttcttaggaagagattgggaaaatggtagaaattaggttt 3904751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4510613 - 4510572
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||    
T  4510613 atagtggattgaagaaatcaatctctcctgtagagtaggtca 4510572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4512455 - 4512414
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||    
T  4512455 atagtggattgaagaaatcaatctctcctgtagagtaggtca 4512414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 8153445 - 8153486
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  8153445 atagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 14069898 - 14069857
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  14069898 atagtggattggagagatcaatctctccccaagattaggtca 14069857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 18388825 - 18388784
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  18388825 atagtggattggagagtacaatctctcctccagagtaggtca 18388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 18392261 - 18392220
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  18392261 atagtggattggagagtacaatctctcctccagagtaggtca 18392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 20344000 - 20344041
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  20344000 atagtggattggagagtacaatctctcctccagagtaggtca 20344041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 24525567 - 24525526
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  24525567 atagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 26639334 - 26639375
Alignment:
Q  204 gaaaatggtagaaattaggtttgttcttggagaacttgttga 245  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  26639334 gaaaatggtagaaattaggtatgttcttggagagtttgttga 26639375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 29608840 - 29608881
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  29608840 atagtggattggagatatcaatcactcctccagagtaggtca 29608881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 30024797 - 30024756
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||| |||| | |||||||||||    
T  30024797 atagtggattggagagatcaatcactcccccagagtaggtca 30024756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 32060387 - 32060346
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  32060387 atagtggattggagagtacaatctctcctccagagtaggtca 32060346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 41317499 - 41317458
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  41317499 atagtggattggagagatcaatctctcccccagattaggtca 41317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 48491682 - 48491723
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  48491682 atagtggattggagagatcaatctctcccccagattaggtca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 22552743 - 22552683
Alignment:
Q  50 gggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggtt 110  Q
    |||||| |||||||| ||||||||||||||| | |||| ||| |||||  |||||||||||    
T  22552743 gggtgaatcttgggagaccaaaagagaagattcataggaaatcaaaggataagggttggtt 22552683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 36574580 - 36574514
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||| |||||||||||||||  ||| ||||||||||||| | ||| ||||||||||||||| ||||    
T  36574580 atagtggtttggagagatcaatccatcc-ctagagtaggtcaat-ttggaccaaactgggtaaacattt 36574514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 43864264 - 43864304
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  43864264 ggtagaaattagggttgttctttgtgaacttgttgaagcta 43864304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 47674091 - 47674051
Alignment:
Q  210 ggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||| |||||||| | ||||||||||||||||    
T  47674091 ggtagaaattagggttgttctttgtgaacttgttgaagcta 47674051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 1632075 - 1631840
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  1632075 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 1631976  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| |||   ||||||||   |||| ||| ||| ||||  |  |||||| | ||||| ||||    
T  1631975 ttgggggttagattctagagttgggaaacaattgtaaacaccttgagagagtgaaaatcatgagtgtcttgttcat-tggtgagattggaaaaatgggta 1631877  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  1631876 gaaattaggattgttctttgtgagcttgttgaagcta 1631840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 35447227 - 35446996
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||| ||||| | ||| |||||| ||||||||||||||||    
T  35447227 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtaaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctctt 35447128  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaa-tggta 213  Q
    |||| |||||||||| ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| | |||| |||||    
T  35447127 ttgggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattggtaaaattggta 35447029  T
Q  214 gaaattaggtttgttcttggagaacttgttgaa 246  Q
    ||||||||| |||||||| | || |||||||||    
T  35447028 gaaattagggttgttctttgtgatcttgttgaa 35446996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 45726754 - 45726989
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  45726754 acacatgagtggagagtcatttgtgagcaacttgggtgagtcatgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 45726853  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| || |||  |||||||||| |||||| ||||  ||||||||   |||| ||| ||  ||||  |  |||||| ||||||| ||||    
T  45726854 ttgggggttagattctagggttaggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttattcat-tggtgagattgggaaaatgggta 45726952  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||  |||||||| | || |||||||||||||    
T  45726953 gaaattagagttgttctttgtgagcttgttgaagcta 45726989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 42288453 - 42288298
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  42288453 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctt 42288354  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaa 170  Q
    || | | |||||||| ||||||| |||||||||| |||||| ||||  ||||||||    
T  42288353 ttcgggtttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaa 42288298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 250
Target Start/End: Original strand, 17450429 - 17450651
Alignment:
Q  30 gagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttagatt 129  Q
    |||||| ||||||| |||| |||||||||||| ||||||||||||||||||| ||||| ||| |||||| |||||||| |||||| |||| |||| ||||    
T  17450429 gagtcaattgtgagaaacttgggtgagtcttgtgaaaccaaaagagaagatcattaggaaatcaaaggctaagggttgattctctattgggggttggatt 17450528  T
Q  130 c-agagttgagaaacaattgcaaacacattggttgagtgaaa-tcaatgaatgttttgctcatgagaggagatttggaaaatgg-tagaaattaggtttg 226  Q
    | |||||||  ||||| |||||||||| |||| ||||||||| ||| ||| ||| ||| ||||  | | ||||||| ||||||| |||| |||||| |||    
T  17450529 ctagagttggcaaacatttgcaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtg-agatttgaaaaatgggtagagattaggcttg 17450627  T
Q  227 ttcttggagaacttgttgaagcta 250  Q
    ||||| | || |||||||||||||    
T  17450628 ttctttgtgagcttgttgaagcta 17450651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 33648275 - 33648346
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttatt 333  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||    
T  33648275 atagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaacatttatt 33648346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 24397883 - 24398018
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttt 116  Q
    |||||||||||||||||||||||||| ||| | |||| ||||||| ||||||||||||||| ||||||| | || | || || ||||||||||||   ||    
T  24397883 acacatgagtggagagtcatttgtgaccaatttgggttagtcttgtgaaaccaaaagagaatatcctta-gaaagtcaaagctaagggttggttc---tt 24397978  T
Q  117 tggaggttagatt-cagagttgagaaacaattgcaaacac 155  Q
    ||| |||||||||  ||||||| |||||||||| ||||||    
T  24397979 tgggggttagattatagagttgggaaacaattgtaaacac 24398018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 28672036 - 28672100
Alignment:
Q  264 agtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatat 328  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| || | |||||||||    
T  28672036 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattaggtaaatat 28672100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 5723321 - 5723282
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5723321 atagtggattggagagatcaatctctcctctagagtaggt 5723282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 337
Target Start/End: Original strand, 45727032 - 45727106
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttattagtg 337  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||| ||| |||||||| || |||| ||||||    
T  45727032 atagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtgaacattttttagtg 45727106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2334483 - 2334442
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  2334483 atagtggattggagagatcaatctctcctccagagtaggtca 2334442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 6595071 - 6595030
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  6595071 atagtggattggagagatcaatctctcctccagagtaggtca 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 250
Target Start/End: Original strand, 33647999 - 33648231
Alignment:
Q  21 atgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgga 120  Q
    |||||| ||||||||||||| ||| |||  || |||||||   |||||||||||||||||||||||| || | || | ||||||||  || ||||||||     
T  33647999 atgagtagagagtcatttgttagctacttaggcgagtcttataaaaccaaaagagaagatccttagggaaatcaaag-caagggttaattatcttttggg 33648097  T
Q  121 ggttagattc-agagttgagaaacaattg-caaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaa 217  Q
    |||||||||| ||||||| || | ||  |  |||||  ||||  ||||| |||| | ||| ||| |||  ||||||||||||||  |||||||||| |||    
T  33648098 ggttagattctagagttgggacataaccgtaaaacatcttgggagagtgaaaataattgagtgtcttgtacatgagaggagattgagaaaatggtaaaaa 33648197  T
Q  218 tta-ggtttgttcttggagaacttgttgaagcta 250  Q
    ||| ||||||||||| | || |||||||||||||    
T  33648198 ttagggtttgttctttgtgagcttgttgaagcta 33648231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 36988141 - 36988100
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  36988141 atagtggattggagagatcaatctctcctccagagtaggtca 36988100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 42261651 - 42261594
Alignment:
Q  193 gaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||  |||||| |||||||||| ||||||||||||||| |||||||||||||    
T  42261651 gaggagattgagaaaatcgtagaaattaagtttgttcttggagagcttgttgaagcta 42261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 17490213 - 17490146
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||||||| |||||||||||||||| ||||||||||||| | ||| ||| ||||||||||| ||||    
T  17490213 atagtggattgtagagatcaatctctcccctagagtaggtcaat-ttggaccgaactgggtaaacattt 17490146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 1631797 - 1631723
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttattagtg 337  Q
    ||||||||||||||| |||||||||||||| |||||||||||  |||| ||| ||||| || ||||||| ||||||    
T  1631797 atagtggattggagaaatcaatctctcctccagagtaggtca-agttggaccgaactgagtgaatatttcttagtg 1631723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 16388519 - 16388561
Alignment:
Q  283 tctctcctctagagtaggtcattgttgaaccaaactgggtaaa 325  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  16388519 tctctcctctagagtaggtcatttttggaccaaactgggtaaa 16388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 24398165 - 24398219
Alignment:
Q  266 tggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgg 320  Q
    |||||||||||||||||||||||| | | ||||||||||||||| ||| ||||||    
T  24398165 tggattggagagatcaatctctcccccatagtaggtcattgttggaccgaactgg 24398219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4484395 - 4484354
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  4484395 atagtggattggagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 4503198 - 4503157
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  4503198 atagtggattggagagttcaatctctcctccagagtaggtca 4503157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 6595159 - 6595114
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||    
T  6595159 aaaatggtagaaattagggttgttctttgtgaacttgttgaagcta 6595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 7451221 - 7451262
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  7451221 atagtggattgcagagatcaatctctcctctacagtaggtca 7451262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 30833449 - 30833490
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  30833449 atagtggattggagagttcaatctctcctccagagtaggtca 30833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 35446949 - 35446908
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  35446949 atagtggattggagagatcactctctcctccagagtaggtca 35446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 36318074 - 36318033
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  36318074 atagtggattggagagatcaatctctcccttagagtaggtca 36318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 45099857 - 45099898
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  45099857 atagtggattggagagttcaatctctcctccagagtaggtca 45099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 48
Target Start/End: Original strand, 7451125 - 7451156
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaact 48  Q
    ||||||||||||||||||||||||||||||||    
T  7451125 acacatgagtggagagtcatttgtgagcaact 7451156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 30218236 - 30218153
Alignment:
Q  167 gaaatcaatgaatgttttgctcatgagaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| ||| ||| ||| |||||  ||||||||  ||||  ||||||| ||||||||||||||||||| ||| |||||||||    
T  30218236 gaaatcattgagtgtcttgttcatggaaggagattgagaaatgggtagaagttaggtttgttcttggagagcttattgaagcta 30218153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 43730992 - 43731074
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttgg 119  Q
    ||||||||||| | |||||| |||||||||||||||| |||| |||| |||| ||| |||| | || |||||||| ||||||||    
T  43730992 tttgtgagcaatttgggtgaatcttgggaaaccaaaatagaatatccgtaggaaatcaaagtctaaaggttggtt-tcttttgg 43731074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 30218358 - 30218269
Alignment:
Q  36 tttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttaggtaattaaaggccaagggttggttctcttttggaggttag 126  Q
    ||||||||||||| | |||||||||| ||||||||||| |  |||||||||| ||| ||| || ||   ||||||||||||||| ||||||    
T  30218358 tttgtgagcaacttgagtgagtcttgcgaaaccaaaag-ggggatccttaggaaatcaaaagctaaatattggttctcttttgggggttag 30218269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 723809 - 723768
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  723809 atagtggattggagagatcaatctctcccccagattaggtca 723768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 6266794 - 6266835
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  6266794 atagtggattggagagtacaatctctcctccagagtaggtca 6266835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 12647451 - 12647410
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  12647451 atagtggattggagagtacaatctctcctccagagtaggtca 12647410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 13656097 - 13656056
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  13656097 atagtggattggagagtacaatctctcctccagagtaggtca 13656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 14633890 - 14633849
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  14633890 atagtggattggagagatcaatctctcccccagattaggtca 14633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 17057434 - 17057393
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  17057434 atagtggattggagagatcaatctctcccccagactaggtca 17057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 17085417 - 17085376
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  17085417 atagtggattggagagatcaatctctcccccagactaggtca 17085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17450681 - 17450721
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  17450681 atagtggattggagagatcaatctctccac-agagtaggtca 17450721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 26353287 - 26353328
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||| |||||||  ||||||||||||    
T  26353287 atagtggattggagagatcactctctcccttagagtaggtca 26353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 33162515 - 33162474
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||| ||||||||||||||||| ||||| |||||||    
T  33162515 atagtggattagagagatcaatctctcccctagattaggtca 33162474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 34139835 - 34139794
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  34139835 atagtggattggagagatcaatctctcccccagattaggtca 34139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 39284939 - 39284980
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | ||| |||||||    
T  39284939 atagtggattggagagatcaatctctcccccagattaggtca 39284980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 41446154 - 41446199
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||| ||||||||||| |||||||||| |||| |||||||||||||    
T  41446154 aaaaaggtagaaattatgtttgttctttgagagcttgttgaagcta 41446199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 41454249 - 41454294
Alignment:
Q  205 aaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||||||||||| |||||| || |||| |||||||||||||    
T  41454249 aaaatggtagaaattagatttgttttttgagagcttgttgaagcta 41454294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 42412121 - 42412161
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  42412121 atagtggattggagagatcaatctctcc-ccagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 7153 - 7387
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||   ||| |||||| ||||||||||||||||    
T  7153 acacatgagtggagagtcttttgtgagcaacttgggtgagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctctt 7252  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| |||| || |||||||||| |||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| | ||||| ||||    
T  7253 ttgggggttagattctagagctg-gaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tggtgagattggaaaaatgggta 7350  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||| | |||||||| | || |||||||||||||    
T  7351 gaaattaaggttgttctttgtgagcttgttgaagcta 7387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 7430 - 7469
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  7430 atagtggattggaaagatcaatctctcctctagagtaggt 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 80626 - 80391
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||| | ||| |||||| ||||||||||||| ||    
T  80626 acacatgagcggagagtcttttgtgagcaacttgggtgagtcttgggaaactaaaagagtagatccttagtgaaatcaaaggctaagggttggttctatt 80527  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaat-ggta 213  Q
    |||| |||||||||| ||||||  ||||||||||  ||||| ||||  ||||||||   |||| ||| ||| ||||  |  |||||| ||||||| ||||    
T  80526 ttgggggttagattctagagttaggaaacaattgtgaacaccttgggagagtgaaaatcatgagtgtcttgttcat-tgctgagattgggaaaatgggta 80428  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||||| | || |||||||||||||    
T  80427 gaaattagggttgttctttgtgagcttgttgaagcta 80391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 11383 - 11609
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||   ||| |||||| || ||||| |||||||    
T  11383 acacatgagtggagagtcatttctgagcaacttgggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctt 11482  T
Q  116 ttggaggttagattc-agagttgagaaacaattgcaaacacattggttgagtg-aaatcaatgaatgttttgctcatgagaggagatttgg-aaaatggt 212  Q
    || | |||||||||| ||||||| ||||| |||| |||||| |||| |||||| |||||| ||| ||| ||| ||||  |  |||||| || ||||||||    
T  11483 tttggggttagattctagagttgggaaac-attgtaaacaccttgg-tgagtgaaaatcattgagtgtcttgttcat-tggtgagattgggaaaaatggt 11579  T
Q  213 agaaattaggtttgttcttggagaacttgt 242  Q
    |||||||||| |||||||| | ||||||||    
T  11580 agaaattagggttgttctttgtgaacttgt 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 11660 - 11701
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  11660 atagtggattggagagttcaatctctcctccagagtaggtca 11701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 18344 - 18111
Alignment:
Q  17 acacatgagtggagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttag-gtaattaaaggccaagggttggttctctt 115  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  ||||||||||||||||||||||| | ||| |||| | ||| ||||||||||||    
T  18344 acacatgagtggagagttatttgtgagcaacttgagtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaagactaagagttggttctctt 18245  T
Q  116 ttggaggttagatt-cagagttgagaaacaattgcaaacacattggttgagtgaaatcaatgaatgttttgctcatgagaggagatttggaaaa-tggta 213  Q
    |||| |||||||||  ||||||| |||||||||| |||||| ||||  ||||||||   |||| ||||||| ||||  |  |||| | |||||| |||||    
T  18244 ttgg-ggttagattatagagttg-gaaacaattgtaaacactttgggagagtgaaaatcatgagtgttttgttcat-tggtgagagtgggaaaattggta 18148  T
Q  214 gaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    ||||||||| |||||| | | || |||||||||||||    
T  18147 gaaattagggttgttcattgtgagcttgttgaagcta 18111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 18069 - 18028
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  18069 atagtggattggagagatcaatctctcctccagggtaggtca 18028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 27507 - 27436
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatatttatt 333  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||| ||| || | |||||| |||||||    
T  27507 atagtggattggagagatcaatctctcccccatagtaggtcattgttggaccgaattaggtaaacatttatt 27436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 490486 - 490429
Alignment:
Q  193 gaggagatttggaaaatggtagaaattaggtttgttcttggagaacttgttgaagcta 250  Q
    |||||||||  |||||| |||||||||| ||||||||||||||| |||||||||||||    
T  490486 gaggagattgagaaaatcgtagaaattaagtttgttcttggagagcttgttgaagcta 490429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 434636 - 434677
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  434636 atagtggattggagagttcaatctctcctccagagtaggtca 434677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 10592 - 10659
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtcattgttgaaccaaactgggtaaatattt 330  Q
    ||||||||||| |||||||||||||||||| |||||||||||  |||| ||| ||||||||||| ||||    
T  10592 atagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaactgggtaaacattt 10659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 1737 - 1679
Alignment:
Q  28 gagagtcatttgtgagcaactagggtgagtcttgggaaaccaaaagagaagatccttagg 87  Q
    |||||||||| |||||||||| ||| ||||||||||| | ||||||||||||||||||||    
T  1737 gagagtcatt-gtgagcaacttgggcgagtcttgggagatcaaaagagaagatccttagg 1679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 114705 - 114744
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  114705 atagtggattggagagatcaatctctcctccagagtaggt 114744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 1018 - 1059
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  1018 atagtggattggagagttcaatctctcctccagagtaggtca 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 3791 - 3750
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  3791 atagtggattggagagttcaatctctcctccagagtaggtca 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 8800 - 8759
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  8800 atagtggattggagagttcaatctctcctccagagtaggtca 8759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 11226 - 11185
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  11226 atagtggattggagagttcaatctctcctccagagtaggtca 11185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 149162 - 149123
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggt 301  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  149162 atagtggattggagagatcaatctctcccccagagtaggt 149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 2669 - 2628
Alignment:
Q  262 atagtggattggagagatcaatctctcctctagagtaggtca 303  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  2669 atagtggattggagagtacaatctctcctccagagtaggtca 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University