View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1860_low_31 (Length: 298)
Name: NF1860_low_31
Description: NF1860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1860_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 15 - 282
Target Start/End: Original strand, 43071756 - 43072023
Alignment:
| Q |
15 |
ttttattttagtccatgtaatattttttgtacttaaattgatttctctatcttaagtagaacatttgattttagtacctcaaatataaactatataaggc |
114 |
Q |
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| T |
43071756 |
ttttattttagtccatgtaatattttttgtacttaaattgatttctctatcttaagtagaacatttgattttagtacctcaaatataaactatataaggc |
43071855 |
T |
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| Q |
115 |
agagtatacgacgttatcctttgttagttgcgggttgtcgtggttaccttatttgttggctgatttgggagtacattgtagcaaactttcaacacaatat |
214 |
Q |
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| T |
43071856 |
agagtatacgacgttatcctttgttagttgcgggttgtcgtggttaccttatttgttggctgatttgggagtacattgtagcaaactttcaacacaatat |
43071955 |
T |
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| Q |
215 |
tgtgacaactagagtgcgattaacatcgaagctaatcctttcctacatgaaaggacaaagcatctaaa |
282 |
Q |
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| T |
43071956 |
tgtgacaaccagagtgcgattaacatcgaagctaatcctttcctacatgaaaggacaaagcatctaaa |
43072023 |
T |
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