View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1860_low_41 (Length: 249)
Name: NF1860_low_41
Description: NF1860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1860_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 39018435 - 39018678
Alignment:
| Q |
1 |
ttgtggaatctaacaaagtgtgcttgttaactttccatatttaacaaaatatggctgacatgattgtcagatcaagttcatgaaggaagacaacacaaca |
100 |
Q |
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| T |
39018435 |
ttgtggaatctaacaaagtgtgcttgttaactttccatatttaacaaaatatggctgacatgattgtcagatcaagttcatgaaggaagacaacacaaca |
39018534 |
T |
|
| Q |
101 |
actagagatagaacaaaggtttatgagnnnnnnngaacatatgnnnnnnnatgatgtgaaataacctatgttttgaggtggctattctatatttgttgta |
200 |
Q |
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||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39018535 |
actagagatagaacaaaggtttatgagaaaaaaagaacatatgtttttttatgatgtgaaataacctatgttttgaggtggctattctatatttgttgta |
39018634 |
T |
|
| Q |
201 |
agaaagacacaaacaaaaggaaaacaacaaatgagaataattta |
244 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
39018635 |
agaaagacacaaacaaaaggaaaacaacaaatgagaagaattta |
39018678 |
T |
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