View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18615_high_8 (Length: 345)
Name: NF18615_high_8
Description: NF18615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18615_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 3 - 330
Target Start/End: Original strand, 45461254 - 45461581
Alignment:
| Q |
3 |
cataggaaggattgggccaaaatattataaaatatatcgttgcattgtgagatatggatattgtgataataatataagggacacgagtgattttgaggag |
102 |
Q |
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| T |
45461254 |
cataggaaggattgggccaaaatattataaaatatatcgttgcattgtgagatatggatattgtgataataatataagggacacgagtgattttgaggag |
45461353 |
T |
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| Q |
103 |
aaaatcattggtgctataggagaattcatttccattgaacagatgagtgacattgaatcaatggtttcggcagaagaaaaaatgatgatagtgggaaatt |
202 |
Q |
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| T |
45461354 |
aaaatcatcggtgctataggagaattcatttccattgaacagatgagtgacattgaatcaatggtttcggcagaagaaaaaatgatgatagtgggaaatt |
45461453 |
T |
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| Q |
203 |
catcagatggaaatgcattagtccctttgatgaatgatgaaacatgcaatgaagttagcattactaatgaagctcagattagcccagcagtaattgagga |
302 |
Q |
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| T |
45461454 |
catcagatggaaatgcattagtccctttgatgaatgatgaaacatgcaatgaagttagcattactaatgaagctcagattagcccagcagtaattgagga |
45461553 |
T |
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| Q |
303 |
aaatgatcatacgttgttggcgagtagt |
330 |
Q |
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|||||||||| | ||||||||||||||| |
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| T |
45461554 |
aaatgatcatgcattgttggcgagtagt |
45461581 |
T |
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