View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18615_low_4 (Length: 486)

Name: NF18615_low_4
Description: NF18615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18615_low_4
NF18615_low_4
[»] chr8 (53 HSPs)
chr8 (22-470)||(17084048-17084490)
chr8 (84-441)||(6388480-6388824)
chr8 (158-453)||(29918450-29918743)
chr8 (124-441)||(28345300-28345615)
chr8 (129-397)||(5700170-5700436)
chr8 (302-453)||(24927934-24928085)
chr8 (302-453)||(29108774-29108925)
chr8 (302-451)||(32303046-32303195)
chr8 (84-396)||(8545358-8545668)
chr8 (302-451)||(24869978-24870127)
chr8 (326-453)||(27932422-27932549)
chr8 (182-394)||(30903911-30904123)
chr8 (84-391)||(9476027-9476323)
chr8 (302-458)||(20399577-20399733)
chr8 (164-355)||(36274892-36275080)
chr8 (302-453)||(40248323-40248474)
chr8 (302-452)||(45236050-45236200)
chr8 (302-417)||(1063492-1063607)
chr8 (354-453)||(5858604-5858703)
chr8 (90-408)||(39379578-39379891)
chr8 (302-441)||(39445540-39445679)
chr8 (319-441)||(15173844-15173966)
chr8 (308-453)||(43113578-43113723)
chr8 (274-453)||(14155491-14155668)
chr8 (162-441)||(27777162-27777440)
chr8 (320-446)||(14687402-14687528)
chr8 (234-355)||(17108295-17108414)
chr8 (302-451)||(1012604-1012752)
chr8 (340-453)||(4230682-4230795)
chr8 (301-441)||(15068552-15068691)
chr8 (318-441)||(10297459-10297582)
chr8 (318-405)||(17469256-17469343)
chr8 (133-228)||(29416353-29416448)
chr8 (302-433)||(30481393-30481524)
chr8 (318-441)||(37960926-37961049)
chr8 (84-200)||(14687263-14687379)
chr8 (370-453)||(17220765-17220848)
chr8 (302-451)||(34139433-34139580)
chr8 (302-411)||(34777051-34777160)
chr8 (301-395)||(2183616-2183710)
chr8 (90-284)||(5793365-5793554)
chr8 (308-441)||(24568929-24569061)
chr8 (302-405)||(9642351-9642454)
chr8 (326-441)||(27056519-27056634)
chr8 (338-452)||(35215557-35215670)
chr8 (338-467)||(29416125-29416253)
chr8 (249-396)||(12468228-12468372)
chr8 (318-406)||(14186321-14186409)
chr8 (370-453)||(2075786-2075869)
chr8 (302-409)||(11255005-11255111)
chr8 (308-406)||(36131916-36132014)
chr8 (316-381)||(33631923-33631988)
chr8 (89-141)||(35747457-35747509)
[»] chr1 (68 HSPs)
chr1 (82-453)||(16903289-16903660)
chr1 (89-441)||(42728910-42729258)
chr1 (87-396)||(39219033-39219338)
chr1 (120-424)||(36421576-36421874)
chr1 (26-381)||(41476976-41477329)
chr1 (302-453)||(23490723-23490874)
chr1 (302-453)||(49250725-49250876)
chr1 (79-388)||(8880215-8880520)
chr1 (301-437)||(36187188-36187324)
chr1 (323-453)||(17134954-17135084)
chr1 (84-395)||(25154837-25155146)
chr1 (90-287)||(45460159-45460357)
chr1 (318-453)||(12495012-12495147)
chr1 (302-441)||(19572476-19572615)
chr1 (302-417)||(28297920-28298035)
chr1 (302-453)||(51421844-51421995)
chr1 (303-453)||(34611060-34611210)
chr1 (318-451)||(16408944-16409077)
chr1 (318-423)||(23058468-23058573)
chr1 (302-415)||(45866175-45866288)
chr1 (85-387)||(48125701-48125983)
chr1 (318-454)||(44615426-44615562)
chr1 (318-454)||(44793007-44793143)
chr1 (132-283)||(13692462-13692613)
chr1 (84-215)||(14890932-14891063)
chr1 (302-441)||(24236725-24236864)
chr1 (302-453)||(40087416-40087566)
chr1 (302-453)||(29936402-29936559)
chr1 (324-418)||(50426648-50426742)
chr1 (324-453)||(5181047-5181176)
chr1 (308-453)||(9982842-9982987)
chr1 (340-453)||(24710871-24710984)
chr1 (274-453)||(13798198-13798375)
chr1 (266-441)||(10778531-10778706)
chr1 (302-453)||(18354032-18354183)
chr1 (300-423)||(35069871-35069994)
chr1 (324-423)||(42707819-42707917)
chr1 (319-417)||(34673270-34673368)
chr1 (301-394)||(10450070-10450163)
chr1 (358-453)||(23968621-23968716)
chr1 (227-453)||(43512982-43513205)
chr1 (306-454)||(29871236-29871384)
chr1 (323-441)||(34085242-34085360)
chr1 (84-205)||(14902910-14903031)
chr1 (324-405)||(34060025-34060106)
chr1 (234-381)||(5283617-5283762)
chr1 (326-405)||(3627985-3628064)
chr1 (338-441)||(19003630-19003733)
chr1 (348-423)||(33293513-33293588)
chr1 (375-453)||(13390456-13390533)
chr1 (318-396)||(16237313-16237391)
chr1 (302-423)||(17091941-17092062)
chr1 (319-395)||(12718782-12718858)
chr1 (106-194)||(18044373-18044461)
chr1 (317-406)||(16433166-16433252)
chr1 (79-280)||(25180968-25181170)
chr1 (339-453)||(48576064-48576184)
chr1 (370-453)||(2514811-2514895)
chr1 (357-441)||(39616333-39616417)
chr1 (88-207)||(5293606-5293725)
chr1 (374-440)||(13020651-13020717)
chr1 (415-453)||(28298045-28298083)
chr1 (266-396)||(47644869-47644996)
chr1 (379-425)||(48312684-48312730)
chr1 (221-336)||(23719510-23719622)
chr1 (338-415)||(35936819-35936896)
chr1 (302-358)||(13390399-13390455)
chr1 (338-436)||(36617382-36617482)
[»] chr5 (50 HSPs)
chr5 (84-470)||(29664740-29665121)
chr5 (84-396)||(6809934-6810237)
chr5 (79-396)||(18451895-18452208)
chr5 (93-441)||(40187622-40187967)
chr5 (129-419)||(27900388-27900673)
chr5 (79-398)||(8020383-8020696)
chr5 (94-399)||(17152948-17153251)
chr5 (79-300)||(35583881-35584101)
chr5 (84-441)||(38972691-38973046)
chr5 (302-453)||(4583104-4583255)
chr5 (302-453)||(5908641-5908792)
chr5 (302-453)||(12866504-12866655)
chr5 (79-441)||(16311258-16311599)
chr5 (302-453)||(4920811-4920962)
chr5 (89-425)||(24207464-24207792)
chr5 (321-441)||(28568986-28569106)
chr5 (321-440)||(20973462-20973581)
chr5 (302-453)||(10127066-10127210)
chr5 (302-453)||(15890192-15890342)
chr5 (302-453)||(30996581-30996731)
chr5 (84-365)||(7350448-7350727)
chr5 (302-441)||(17853258-17853396)
chr5 (302-441)||(29245916-29246055)
chr5 (338-453)||(33727954-33728069)
chr5 (318-453)||(40517807-40517942)
chr5 (89-394)||(12457292-12457594)
chr5 (301-441)||(23044956-23045096)
chr5 (318-441)||(2681217-2681340)
chr5 (302-441)||(12834539-12834678)
chr5 (302-453)||(42987432-42987583)
chr5 (318-396)||(12712567-12712645)
chr5 (370-453)||(6092482-6092565)
chr5 (306-385)||(35194010-35194089)
chr5 (318-396)||(12773831-12773909)
chr5 (339-453)||(13401957-13402071)
chr5 (271-458)||(32574885-32575071)
chr5 (301-365)||(18116547-18116611)
chr5 (301-365)||(43523743-43523807)
chr5 (374-453)||(3564692-3564770)
chr5 (307-453)||(6155873-6156017)
chr5 (302-417)||(22694891-22695005)
chr5 (324-396)||(10822536-10822608)
chr5 (370-473)||(39422399-39422502)
chr5 (326-423)||(6369705-6369801)
chr5 (321-414)||(20634186-20634279)
chr5 (321-414)||(20650300-20650393)
chr5 (302-423)||(28045641-28045761)
chr5 (302-365)||(6092559-6092622)
chr5 (370-451)||(2412681-2412762)
chr5 (408-453)||(12457596-12457641)
[»] chr7 (78 HSPs)
chr7 (85-467)||(3773844-3774225)
chr7 (84-441)||(37217778-37218134)
chr7 (89-399)||(11472720-11473025)
chr7 (302-453)||(35074460-35074611)
chr7 (86-441)||(4101317-4101671)
chr7 (92-405)||(19440010-19440322)
chr7 (92-405)||(23475263-23475575)
chr7 (302-453)||(10072456-10072607)
chr7 (302-453)||(16866159-16866310)
chr7 (302-453)||(30650621-30650772)
chr7 (129-406)||(43550416-43550689)
chr7 (302-453)||(18125180-18125331)
chr7 (92-405)||(23533604-23533916)
chr7 (163-435)||(3156936-3157206)
chr7 (302-453)||(17885455-17885606)
chr7 (318-441)||(27063144-27063267)
chr7 (167-389)||(6557741-6557962)
chr7 (84-313)||(31345300-31345527)
chr7 (318-438)||(12980383-12980503)
chr7 (302-458)||(45885712-45885868)
chr7 (302-441)||(7779998-7780137)
chr7 (302-453)||(21702649-21702800)
chr7 (302-453)||(39455967-39456117)
chr7 (302-453)||(45380097-45380247)
chr7 (306-412)||(27850319-27850425)
chr7 (315-453)||(18825818-18825962)
chr7 (318-423)||(22973394-22973499)
chr7 (302-453)||(17851844-17851993)
chr7 (300-423)||(27063322-27063445)
chr7 (302-453)||(38139744-38139895)
chr7 (327-441)||(8906553-8906667)
chr7 (301-423)||(31425997-31426119)
chr7 (318-415)||(18683980-18684077)
chr7 (91-411)||(29292471-29292803)
chr7 (302-446)||(27896434-27896578)
chr7 (325-453)||(43507458-43507586)
chr7 (302-453)||(3226898-3227049)
chr7 (302-441)||(38152877-38153015)
chr7 (302-441)||(39316985-39317124)
chr7 (370-453)||(44658419-44658502)
chr7 (318-396)||(21750788-21750866)
chr7 (326-411)||(41103670-41103755)
chr7 (302-417)||(2630562-2630676)
chr7 (302-441)||(37182265-37182403)
chr7 (340-423)||(42908023-42908106)
chr7 (320-446)||(25905637-25905762)
chr7 (318-395)||(32546198-32546275)
chr7 (318-411)||(45708859-45708952)
chr7 (321-453)||(5377094-5377226)
chr7 (321-401)||(25979921-25980001)
chr7 (326-453)||(44734311-44734436)
chr7 (340-453)||(24753192-24753304)
chr7 (320-405)||(26622959-26623044)
chr7 (318-423)||(43218289-43218394)
chr7 (308-396)||(25782916-25783004)
chr7 (319-423)||(30839116-30839220)
chr7 (370-441)||(37195973-37196044)
chr7 (338-413)||(41741442-41741517)
chr7 (318-392)||(28309498-28309572)
chr7 (321-405)||(3920547-3920631)
chr7 (319-399)||(5022603-5022683)
chr7 (305-441)||(33841071-33841206)
chr7 (354-429)||(2472025-2472100)
chr7 (302-441)||(5565271-5565410)
chr7 (348-423)||(29014934-29015009)
chr7 (318-396)||(10995843-10995921)
chr7 (301-423)||(44845117-44845239)
chr7 (302-395)||(16811720-16811812)
chr7 (338-406)||(24425406-24425474)
chr7 (301-453)||(37103079-37103231)
chr7 (138-193)||(8265656-8265711)
chr7 (302-381)||(44794052-44794130)
chr7 (370-453)||(44985870-44985952)
chr7 (325-395)||(10990871-10990941)
chr7 (409-467)||(23457156-23457214)
chr7 (318-441)||(29157355-29157480)
chr7 (320-396)||(16079021-16079097)
chr7 (302-390)||(29855468-29855556)
[»] chr4 (91 HSPs)
chr4 (89-423)||(35304499-35304831)
chr4 (89-453)||(21956767-21957126)
chr4 (176-441)||(8843770-8844032)
chr4 (176-441)||(8856734-8856996)
chr4 (84-441)||(12075597-12075951)
chr4 (84-401)||(42907662-42907976)
chr4 (84-324)||(25265229-25265466)
chr4 (85-387)||(37926337-37926635)
chr4 (85-436)||(25940923-25941263)
chr4 (164-381)||(33516097-33516313)
chr4 (79-441)||(36918894-36919253)
chr4 (84-300)||(33616219-33616435)
chr4 (86-395)||(36306562-36306869)
chr4 (302-451)||(6382227-6382376)
chr4 (302-453)||(11028064-11028215)
chr4 (318-453)||(15987215-15987350)
chr4 (89-441)||(39085933-39086287)
chr4 (302-451)||(44317526-44317675)
chr4 (302-446)||(7608961-7609105)
chr4 (133-388)||(21713993-21714246)
chr4 (79-320)||(17113089-17113327)
chr4 (306-412)||(19534450-19534556)
chr4 (302-451)||(31752447-31752596)
chr4 (306-453)||(19883009-19883156)
chr4 (302-453)||(21423852-21424003)
chr4 (302-453)||(55826576-55826727)
chr4 (302-452)||(43893219-43893368)
chr4 (318-435)||(15733497-15733614)
chr4 (130-393)||(16574932-16575194)
chr4 (89-405)||(25298834-25299147)
chr4 (302-423)||(47550336-47550457)
chr4 (193-399)||(4741223-4741426)
chr4 (318-441)||(6482000-6482123)
chr4 (302-441)||(10302075-10302214)
chr4 (302-453)||(31918511-31918662)
chr4 (302-411)||(5902609-5902718)
chr4 (212-441)||(12505505-12505722)
chr4 (301-441)||(30672953-30673091)
chr4 (166-413)||(9929160-9929405)
chr4 (320-423)||(14605908-14606011)
chr4 (318-453)||(26564838-26564973)
chr4 (318-396)||(29527819-29527897)
chr4 (302-411)||(32585480-32585589)
chr4 (320-441)||(1866514-1866635)
chr4 (129-278)||(7334309-7334458)
chr4 (300-405)||(10574420-10574525)
chr4 (302-423)||(11122852-11122973)
chr4 (302-423)||(48459472-48459593)
chr4 (320-396)||(32596194-32596270)
chr4 (319-405)||(31782621-31782707)
chr4 (308-405)||(1724311-1724408)
chr4 (318-379)||(4652682-4652743)
chr4 (318-423)||(47103745-47103850)
chr4 (166-282)||(30034531-30034647)
chr4 (370-453)||(37349171-37349254)
chr4 (318-441)||(45065256-45065379)
chr4 (163-352)||(9280943-9281130)
chr4 (86-406)||(23927641-23927956)
chr4 (86-226)||(40420753-40420890)
chr4 (339-441)||(43309511-43309613)
chr4 (318-395)||(21544586-21544663)
chr4 (340-433)||(33615302-33615395)
chr4 (302-399)||(33916148-33916245)
chr4 (302-423)||(47239368-47239489)
chr4 (358-453)||(19548891-19548985)
chr4 (87-193)||(3505045-3505150)
chr4 (318-396)||(50684474-50684552)
chr4 (348-441)||(7334162-7334254)
chr4 (319-396)||(12825471-12825548)
chr4 (306-395)||(37246840-37246929)
chr4 (340-433)||(41914969-41915062)
chr4 (79-222)||(4652531-4652673)
chr4 (318-389)||(30266347-30266418)
chr4 (318-389)||(30285770-30285841)
chr4 (87-141)||(3513970-3514024)
chr4 (338-399)||(3505295-3505356)
chr4 (302-451)||(39046943-39047092)
chr4 (320-441)||(42299799-42299918)
chr4 (94-246)||(24474972-24475124)
chr4 (318-438)||(31415899-31416019)
chr4 (333-441)||(37107433-37107540)
chr4 (327-386)||(29035552-29035611)
chr4 (327-386)||(29047685-29047744)
chr4 (351-441)||(25265130-25265219)
chr4 (342-399)||(3516348-3516405)
chr4 (324-425)||(3737789-3737890)
chr4 (348-453)||(39375315-39375420)
chr4 (259-411)||(40420580-40420730)
chr4 (319-363)||(568425-568469)
chr4 (357-453)||(7985078-7985174)
chr4 (405-441)||(29527894-29527930)
[»] chr2 (56 HSPs)
chr2 (129-387)||(30696739-30696995)
chr2 (88-396)||(25210151-25210457)
chr2 (82-441)||(35248349-35248702)
chr2 (88-446)||(34214617-34214971)
chr2 (79-425)||(13954512-13954854)
chr2 (79-425)||(14095719-14096061)
chr2 (79-364)||(29656773-29657060)
chr2 (79-406)||(35965099-35965424)
chr2 (302-453)||(24414084-24414235)
chr2 (318-453)||(30846948-30847083)
chr2 (79-395)||(34544320-34544636)
chr2 (301-423)||(38342501-38342623)
chr2 (302-411)||(37999469-37999578)
chr2 (302-453)||(45115544-45115697)
chr2 (324-453)||(37106700-37106829)
chr2 (318-423)||(43371555-43371660)
chr2 (318-418)||(13705348-13705448)
chr2 (302-441)||(7314612-7314751)
chr2 (302-453)||(13830722-13830872)
chr2 (258-406)||(17845390-17845538)
chr2 (324-441)||(37472723-37472840)
chr2 (302-423)||(45256809-45256930)
chr2 (302-441)||(9632372-9632511)
chr2 (302-441)||(36128070-36128209)
chr2 (318-453)||(44746061-44746196)
chr2 (106-193)||(4961612-4961699)
chr2 (138-281)||(35409274-35409417)
chr2 (302-435)||(10208400-10208533)
chr2 (318-409)||(14331529-14331620)
chr2 (318-441)||(22900796-22900919)
chr2 (163-453)||(40734536-40734823)
chr2 (302-452)||(12193780-12193930)
chr2 (91-283)||(31600888-31601078)
chr2 (326-406)||(6027888-6027968)
chr2 (370-453)||(12341654-12341737)
chr2 (302-441)||(15546730-15546869)
chr2 (319-441)||(31942149-31942272)
chr2 (302-381)||(42798012-42798091)
chr2 (211-372)||(11958912-11959071)
chr2 (302-451)||(8915892-8916040)
chr2 (261-396)||(40359291-40359424)
chr2 (318-389)||(3547168-3547239)
chr2 (324-419)||(24051610-24051705)
chr2 (319-405)||(18485651-18485737)
chr2 (325-405)||(6164473-6164553)
chr2 (339-398)||(14540804-14540863)
chr2 (370-441)||(18106083-18106154)
chr2 (301-395)||(44057867-44057962)
chr2 (301-405)||(4427909-4428013)
chr2 (405-453)||(6027853-6027901)
chr2 (353-441)||(10212443-10212531)
chr2 (181-300)||(13531817-13531935)
chr2 (344-399)||(34320653-34320708)
chr2 (320-377)||(4961479-4961536)
chr2 (340-441)||(26755764-26755865)
chr2 (339-396)||(33175252-33175309)
[»] chr6 (55 HSPs)
chr6 (79-407)||(34346003-34346338)
chr6 (166-395)||(20348916-20349142)
chr6 (302-453)||(5863335-5863486)
chr6 (139-396)||(9402413-9402667)
chr6 (302-441)||(27534669-27534808)
chr6 (302-453)||(32853829-32853980)
chr6 (92-433)||(256464-256803)
chr6 (318-453)||(2367327-2367462)
chr6 (302-453)||(3483875-3484026)
chr6 (33-300)||(1947894-1948162)
chr6 (302-453)||(12141370-12141521)
chr6 (302-453)||(27738757-27738908)
chr6 (302-453)||(10188032-10188176)
chr6 (321-441)||(9458667-9458787)
chr6 (302-458)||(10142465-10142621)
chr6 (321-441)||(28079660-28079780)
chr6 (84-200)||(29342114-29342230)
chr6 (302-453)||(24225683-24225840)
chr6 (302-451)||(15498309-15498458)
chr6 (195-423)||(29341131-29341362)
chr6 (302-451)||(32532525-32532674)
chr6 (88-200)||(29340693-29340805)
chr6 (91-396)||(8320804-8321107)
chr6 (129-394)||(10925454-10925717)
chr6 (249-453)||(13769006-13769208)
chr6 (320-423)||(9458861-9458964)
chr6 (318-456)||(32053089-32053221)
chr6 (347-441)||(30986283-30986377)
chr6 (318-399)||(14410861-14410942)
chr6 (302-418)||(12309557-12309673)
chr6 (306-405)||(24602856-24602955)
chr6 (302-453)||(30816245-30816394)
chr6 (338-410)||(34178324-34178396)
chr6 (306-449)||(11762434-11762577)
chr6 (301-396)||(18908877-18908972)
chr6 (318-425)||(19367010-19367117)
chr6 (339-441)||(9442452-9442553)
chr6 (309-423)||(12678076-12678190)
chr6 (249-406)||(32959795-32959949)
chr6 (348-441)||(31496465-31496558)
chr6 (348-441)||(31501851-31501944)
chr6 (320-431)||(5108905-5109016)
chr6 (338-405)||(14034523-14034590)
chr6 (320-395)||(29199895-29199970)
chr6 (318-423)||(17546884-17546989)
chr6 (333-441)||(20610946-20611054)
chr6 (87-198)||(252973-253084)
chr6 (142-205)||(2126819-2126882)
chr6 (137-236)||(24221438-24221537)
chr6 (321-423)||(14254962-14255063)
chr6 (379-425)||(30624477-30624523)
chr6 (89-224)||(14321646-14321777)
chr6 (357-422)||(21875632-21875697)
chr6 (92-300)||(34179111-34179319)
chr6 (315-395)||(7393897-7393977)
[»] chr3 (58 HSPs)
chr3 (302-458)||(44953382-44953538)
chr3 (302-453)||(49580049-49580200)
chr3 (138-450)||(27252391-27252697)
chr3 (302-453)||(39655225-39655376)
chr3 (101-324)||(37032179-37032398)
chr3 (302-453)||(48390769-48390920)
chr3 (321-470)||(34119660-34119809)
chr3 (303-453)||(7469730-7469880)
chr3 (302-423)||(44172611-44172732)
chr3 (302-423)||(44179311-44179432)
chr3 (302-453)||(39728656-39728807)
chr3 (302-450)||(23580812-23580960)
chr3 (274-453)||(42243346-42243523)
chr3 (318-453)||(29284337-29284472)
chr3 (318-441)||(44252748-44252871)
chr3 (318-441)||(52198156-52198279)
chr3 (318-453)||(54317145-54317280)
chr3 (202-387)||(30904834-30905016)
chr3 (302-446)||(10043241-10043385)
chr3 (318-446)||(44639275-44639403)
chr3 (338-453)||(19111755-19111870)
chr3 (302-453)||(29842293-29842443)
chr3 (302-453)||(34025939-34026090)
chr3 (302-441)||(34154399-34154538)
chr3 (308-446)||(4557264-4557402)
chr3 (302-411)||(23546936-23547045)
chr3 (320-441)||(53631907-53632028)
chr3 (326-441)||(22535805-22535920)
chr3 (338-453)||(43582598-43582713)
chr3 (318-453)||(48305593-48305728)
chr3 (302-441)||(52572594-52572733)
chr3 (320-441)||(4016008-4016129)
chr3 (351-435)||(3414507-3414591)
chr3 (90-205)||(40890141-40890254)
chr3 (167-453)||(3385808-3386092)
chr3 (259-436)||(4553135-4553309)
chr3 (134-300)||(772897-773064)
chr3 (370-453)||(6738357-6738440)
chr3 (370-453)||(20087050-20087133)
chr3 (318-452)||(42758375-42758509)
chr3 (300-441)||(1772363-1772504)
chr3 (306-395)||(34593119-34593208)
chr3 (302-435)||(44106763-44106895)
chr3 (302-446)||(23154024-23154167)
chr3 (348-412)||(41937006-41937070)
chr3 (395-458)||(10371220-10371283)
chr3 (137-300)||(26207109-26207269)
chr3 (342-423)||(35687473-35687554)
chr3 (348-423)||(2490336-2490411)
chr3 (302-405)||(49025666-49025768)
chr3 (92-242)||(34592933-34593083)
chr3 (302-409)||(10823692-10823796)
chr3 (129-406)||(27937545-27937827)
chr3 (318-405)||(30616281-30616368)
chr3 (321-411)||(831013-831102)
chr3 (319-389)||(40796153-40796223)
chr3 (318-363)||(31271299-31271344)
chr3 (373-441)||(30682876-30682944)
[»] scaffold0244 (1 HSPs)
scaffold0244 (84-396)||(4590-4899)
[»] scaffold0036 (1 HSPs)
scaffold0036 (320-418)||(33396-33494)
[»] scaffold0157 (1 HSPs)
scaffold0157 (212-441)||(14755-14972)
[»] scaffold0005 (1 HSPs)
scaffold0005 (320-423)||(211367-211470)
[»] scaffold0008 (2 HSPs)
scaffold0008 (318-441)||(67750-67873)
scaffold0008 (318-441)||(75593-75716)
[»] scaffold1322 (1 HSPs)
scaffold1322 (89-326)||(886-1120)
[»] scaffold0022 (1 HSPs)
scaffold0022 (321-411)||(90601-90691)
[»] scaffold0184 (1 HSPs)
scaffold0184 (318-423)||(2970-3075)
[»] scaffold0198 (1 HSPs)
scaffold0198 (289-395)||(20749-20853)
[»] scaffold0013 (2 HSPs)
scaffold0013 (318-423)||(128103-128208)
scaffold0013 (318-376)||(105498-105556)
[»] scaffold0009 (1 HSPs)
scaffold0009 (327-435)||(107361-107469)
[»] scaffold0014 (1 HSPs)
scaffold0014 (370-453)||(14136-14218)
[»] scaffold0182 (1 HSPs)
scaffold0182 (319-399)||(16969-17049)
[»] scaffold0059 (1 HSPs)
scaffold0059 (318-376)||(70096-70154)
[»] scaffold0002 (1 HSPs)
scaffold0002 (379-425)||(449764-449810)
[»] scaffold0519 (1 HSPs)
scaffold0519 (302-409)||(10282-10388)
[»] scaffold0027 (1 HSPs)
scaffold0027 (358-441)||(7738-7820)
[»] scaffold0189 (1 HSPs)
scaffold0189 (302-388)||(4243-4329)
[»] scaffold0795 (1 HSPs)
scaffold0795 (360-441)||(267-348)
[»] scaffold0015 (1 HSPs)
scaffold0015 (300-396)||(55907-56002)


Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 22 - 470
Target Start/End: Complemental strand, 17084490 - 17084048
Alignment:
Q  22 gtctcatccctatccccgcaatcgctaatttattttaataaaaataaaagnnnnnnnagccacgagcgcaatgttgtattgcattatccagtaaaaagat 121  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||||||||||    
T  17084490 gtctcattcccatccccgcaatcgataatttattttaataaaaataaaagtttttttagccacgagcgcaatgttgtaatgcattatccagtaaaaagat 17084391  T
Q  122 gttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaa 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  17084390 gttgtcgatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagataactatgataagtgattgtcatatgaa 17084291  T
Q  222 agactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggt 321  Q
    ||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  17084290 agactgaaactctgattgtgtgaggggaataatttagggcttgggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggt 17084191  T
Q  322 ttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatca 421  Q
    |||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||      ||||||| | ||||||| |||    
T  17084190 ttggatatgagttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcggagaaa------acccaaatcaaaacccagtca 17084097  T
Q  422 aagcagggaaaacccgtcaacttggatttggtccgagtggctacccaca 470  Q
    |||| ||||||||||||||||||| ||||||| || |||| ||||||||    
T  17084096 aagcggggaaaacccgtcaacttgaatttggttcgggtgggtacccaca 17084048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 84 - 441
Target Start/End: Complemental strand, 6388824 - 6388480
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||||||||| |||||||||||| ||||||||  ||  ||| |||| |||| ||||||||||||| | ||| |||||||||||   ||||||||    
T  6388824 cgagcgcaatgttgtaatgcattatccagcaaaaagattatggaaatggatggctatagtgaaggagaagagagaggccgagagtgtgaggcatggaagg 6388725  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||  ||| ||||||||||||| | |||||| | |||| |||| ||||| |||||||||||  ||| ||||| ||||||||||| | |||||||||||    
T  6388724 agaaagaagagaactatgataagtgagtgtcattttaaagtctgagactctaattgtgtgagtgaaatgatttagggtttgggtttctgtttatataaaa 6388625  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||| |||||||||||  ||| |||||||  |||||||||| | |           ||||||| |||||||||||||||||||| |||||||||||||||    
T  6388624 tgggtaataaattgat--tttctacattcaggatgggtttgagca-----------tgggtacctatatccccgttacccgtcttgtacccgtgttttaa 6388538  T
Q  384 aatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||||||| || || ||||| |||||||| || ||||| | | |||| ||||||||    
T  6388537 aatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtcaa 6388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 158 - 453
Target Start/End: Original strand, 29918450 - 29918743
Alignment:
Q  158 aggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataattta 257  Q
    ||||||||||||| | |||||||||| ||||||| | ||||||||||| ||| |||||||||||||| ||| ||||| | |||||||||  ||| |||||    
T  29918450 aggtcgagagtgtaagatatggaaggcgaaaagatagaactatgataactaagtgtcatctgaaagattgagactctaactgtgtgagtgaaatgattta 29918549  T
Q  258 aggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccg 357  Q
     |||||| |||| |||||||||||||  || |||||||||||  |||||||||| | || ||||||| |||||  |||| ||||||||| ||||||   |    
T  29918550 gggtttgagtttctatttatataaaagaggtaataaattgat--tttttacatttgggacgggtttgtgtatggtttcggggtgggtacatatatctttg 29918647  T
Q  358 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||   ||||  ||||||| |||||||| |||||||| || || ||||||| ||| |||||||||| ||||| |||||  ||| |||||||    
T  29918648 ttacccgttctgtacatgtgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaagcaggaaaaactcgtcagtttgaatttggt 29918743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 124 - 441
Target Start/End: Original strand, 28345300 - 28345615
Alignment:
Q  124 tgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaag 223  Q
    |||| |||||| |||||||||| |||||||| | ||||| | ||||||| ||||||||||||| |||||| ||||||||||||| | ||||||||||||     
T  28345300 tgtcgatcgattactatggtgatggagaagagagaggtcaaaagtgtgagatatggaaggagataagagagaactatgataagtgagtgtcatctgaaat 28345399  T
Q  224 actgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggttt 323  Q
    ||||| ||| ||| |||||||||  ||| |||||   ||| ||||| ||||||||||||| ||| |||| ||| ||  ||| |||||||  ||   ||||    
T  28345400 actgagactatgactgtgtgagtgaaatgatttagaatttcggtttctatttatataaaaggggtaatatatttat--tttctacattcaggacaagttt 28345497  T
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| ||||| ||||||| | ||||||| |||||||| ||  |||||||||||||  ||||||| ||||  || ||| | ||| ||||||| |||||    
T  28345498 gggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagtcaaa 28345597  T
Q  424 gcagggaaaacccgtcaa 441  Q
    || || ||||||||||||    
T  28345598 gcgggaaaaacccgtcaa 28345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 5700170 - 5700436
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    ||||||| | ||||||| |||||||| | |||  || ||||||| ||||| ||||||| |||||| || |||||||||| | |||||||| ||||||| |    
T  5700170 atcgatggcaatggtgatggagaagagagaggcagatagtgtgagatatgaaaggagataagagagaattatgataagtgactgtcatctaaaagactaa 5700269  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
     ||||||| | || ||||  ||| |||||  |||| |||||  |||||||||||| ||| || ||||| |||  || |||||||| ||||| ||||||||    
T  5700270 gactctgactatgggagtgaaatgatttagagtttcggtttcaatttatataaaaggggtaaaaaattaatt--ttatacattcgggatggatttgggta 5700367  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaact 397  Q
    || ||||||||||||||  ||||||||||||||| ||||| |||| ||||||| |||||||| ||||||    
T  5700368 tgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaact 5700436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 24927934 - 24928085
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| |||||||||||  | ||| |||||||| ||||    
T  24927934 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccata 24928033  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  24928034 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 24928085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 29108925 - 29108774
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | ||||| ||||||||||||||| ||||| ||||    
T  29108925 tttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccata 29108826  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  29108825 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 29108774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 32303046 - 32303195
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  32303046 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 32303145  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||    
T  32303146 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttg 32303195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 396
Target Start/End: Complemental strand, 8545668 - 8545358
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||| ||||||||| |||||||||||  ||| ||||| || | || |||| ||||| |||  ||||| | | |||| |||| ||||| ||||||||||    
T  8545668 cgagcgtaatgttgtaatgcattatccaacaaagagatgatgacgatggatggctatgttgattgagaaaagagaggttgagaatgtgagatatggaagg 8545569  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| || |||||||||| | |||||| |||||||| || ||||||  | | |||||  ||| ||||| ||||||| ||| | |||||||||||    
T  8545568 agaaaagagagaattatgataagtgagtgtcatttgaaagaccgagactctggctatttgagtgaaatgatttagggtttggatttctgtttatataaaa 8545469  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     | |   |||||||||  ||| |||||| | || | ||||| ||||| ||||| ||||||||  |||||||||||||| |||  | |||||||||||| |    
T  8545468 ggagttgtaaattgat--tttctacatttgggacgagtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttga 8545371  T
Q  384 aatcggggaaaac 396  Q
    |||||| ||||||    
T  8545370 aatcggagaaaac 8545358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 451
Target Start/End: Complemental strand, 24870127 - 24869978
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||| |||||| | ||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  24870127 tttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaactcata 24870028  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
     ||| |||||||  || ||||| | || |||||||||||| |||||||||    
T  24870027 gccatacccaaattcagtcaaaacgggaaaaacccgtcaaattggatttg 24869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 27932422 - 27932549
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    ||||| ||||| ||||||||| ||||| |||||||| |||| | |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  426 agggaaaacccgtcaacttggatttggt 453  Q
     ||||||||||||||| |||| ||||||    
T  27932522 ggggaaaacccgtcaaattgggtttggt 27932549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 394
Target Start/End: Original strand, 30903911 - 30904123
Alignment:
Q  182 ggagaaaagagaaaactatgataagtaattgtcatctgaaagact-gaaactct-gattgtgtgagttgaataatttaaggtttgggtttatatttatat 279  Q
    |||||||||||||||||||||||| | | |||||| ||||| | | || ||| | || |||||||||  ||| ||||||||||| ||||| |||||||||    
T  30903911 ggagaaaagagaaaactatgataaatgaatgtcatttgaaaaaattgagacttttgactgtgtgagtgaaatgatttaaggttttggtttctatttatat 30904010  T
Q  280 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 379  Q
    |||| | | ||||||||||||  || |||||||| ||  | |||||||||| ||  | |||||||||||||||| || ||||||||||||||||||||||    
T  30904011 aaaatgtgtaataaattgatt--ttctacattcgggactgatttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgtt 30904108  T
Q  380 ttaaaatcggggaaa 394  Q
    || |||||| |||||    
T  30904109 ttgaaatcgaggaaa 30904123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 391
Target Start/End: Complemental strand, 9476323 - 9476027
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||| ||||||| |||||||||||| | | ||||| |  | |||| |  | ||||||| |||||||| | ||||||||||||||| || ||||||     
T  9476323 cgagcgcagtgttgtaatgcattatccaggacagagatgatagcgatcggtagcaatggtgatggagaagagagaggtcgagagtgtgagatgtggaagt 9476224  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| |||||| |||||||||||||   |||         |||| | ||||||| |||||||||  |||||||||  ||||   ||| |||||||||| ||    
T  9476223 agataagagagaactatgataagtgtgtgt---------gactaagactctgactgtgtgagtgaaataatttagagtttcaatttctatttatatataa 9476133  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||| ||||| || |||  || |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||  ||| |||| |||| |||| |    
T  9476132 ggggtaataatttaatt--ttctacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcccgtatccgttttttga 9476035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 20399577 - 20399733
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||| |||||| || ||||||||| ||| ||||| ||||||||  ||||| ||||||||||||| | |||||||||||| ||||||| |||||| || |    
T  20399577 tttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaa 20399676  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    |||| ||||||||||| ||||| | |||||||| |||||| |||| |||||| ||||    
T  20399677 cccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgag 20399733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 36274892 - 36275080
Alignment:
Q  164 agagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggttt 263  Q
    ||||||||| ||||||||||||||||| ||  |||||||||||| | ||||||||||||||| || ||| ||| |||||||||  ||| |||| ||| ||    
T  36274892 agagtgtgagatatggaaggagaaaagggaggactatgataagtgagtgtcatctgaaagaccgagactttgactgtgtgagtgaaatgattt-agggtt 36274990  T
Q  264 gggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccc 355  Q
    |||||| ||||||||||||| ||  | |||||||||  |||||||||||| ||   |||| |||||| ||||| |||| |||||||||||||    
T  36274991 gggtttctatttatataaaagggatagtaaattgat--tttttacattcgggacatgtttaggtatgggttcggggtgagtacttatatccc 36275080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 40248474 - 40248323
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || | |||||||| ||||| | ||||||| ||||| ||||||| ||||||| |||||||||||| ||||||||||||||  |||    
T  40248474 tttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacatata 40248375  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | || |||||||||||| |||| ||||||    
T  40248374 cccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggt 40248323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 452
Target Start/End: Original strand, 45236050 - 45236200
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| ||| |||| ||||| ||||||||| ||||| ||| ||||||||| | |||||||||||| ||||| |||||||||||||    
T  45236050 tttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcata 45236149  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttgg 452  Q
    |||| || ||||| || ||||| | ||||||||||||||| |||| |||||    
T  45236150 cccatactcaaactcagtcaaaacggggaaaacccgtcaaattggttttgg 45236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 417
Target Start/End: Original strand, 1063492 - 1063607
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||| | | ||||| |||||||||||||||| ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||| ||||| ||||    
T  1063492 tttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccata 1063591  T
Q  402 cccaaacccaaaccca 417  Q
    |||| ||||| |||||    
T  1063592 cccatacccacaccca 1063607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 5858703 - 5858604
Alignment:
Q  354 cccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||||| | |||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| | ||||||||||||||| |||||||||||    
T  5858703 cccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggatttggt 5858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 408
Target Start/End: Complemental strand, 39379891 - 39379578
Alignment:
Q  90 caatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaa 189  Q
    |||||||||| |||||||||||  ||| ||||| |||||||| ||||||||||||| |||||||| | ||  ||||  ||||| || | ||||||||| |    
T  39379891 caatgttgtaatgcattatccaacaaagagatgatgtcaatcaatgactatggtgatggagaagagagagaccgaggttgtgagatgtagaaggagaaga 39379792  T
Q  190 gagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggca 289  Q
    |||| ||||  |  ||||   |||| | |||||||| || ||   |||||||| |||  ||| ||||||| ||||| ||| |||||||| | || ||  |    
T  39379791 gagataactcgggcaagtgggtgtcgtgtgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggata 39379693  T
Q  290 ataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    |||||||||||  |  |||||||| || | ||||| ||||||||||| ||||||||||| ||||| | ||||||||| |||||||||||||| | ||| |    
T  39379692 ataaattgatt--tactacattcgggacgagtttgagtatgagttcg-ggtgggtacttttatcctcattacccgtcccgtacccgtgttttgagatc-g 39379597  T
Q  390 ggaaaactcatacccaaac 408  Q
    ||||||| |||||||||||    
T  39379596 ggaaaacccatacccaaac 39379578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 39445679 - 39445540
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||||||||| ||||||||| ||||  ||||||||| ||| | |||||||||||| |||||||| ||||| ||||    
T  39445679 tttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccata 39445580  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||| | ||||| | ||||||| |||||||    
T  39445579 cccatacccaaacctagtcaaaacggggaaaatccgtcaa 39445540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 15173966 - 15173844
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 418  Q
    |||||| ||||||||||||||||| ||| |||||| |  ||||||||| ||||||||| |||| |||||||| |||||||| || || |||||||||||     
T  15173966 ggtttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccag 15173867  T
Q  419 tcaaagcagggaaaacccgtcaa 441  Q
    ||||| ||| |||||||||||||    
T  15173866 tcaaatcagagaaaacccgtcaa 15173844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 43113723 - 43113578
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 407  Q
    |||||| || || |||||||||||||||| ||||||||| ||||| || |||||||||| | | |||||||||| |||||||| ||||| ||  | || |    
T  43113723 cattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcata 43113624  T
Q  408 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | |||||||| |||||||||||||||||||| || |||| ||||||    
T  43113623 cgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggt 43113578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 14155491 - 14155668
Alignment:
Q  274 ttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacc 373  Q
    |||||||||| ||| ||||||||||||  || ||||||   ||||||||||||||||| || | ||||| ||  ||||||| |||||||| |||  ||||    
T  14155491 ttatataaaaggggtaataaattgatt--ttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacc 14155588  T
Q  374 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||| |||||||| ||||| || || || ||||||||||| ||| | | ||||||||||||||| |||| ||||||    
T  14155589 cgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggtttggt 14155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 441
Target Start/End: Complemental strand, 27777440 - 27777162
Alignment:
Q  162 cgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggt 261  Q
    ||||| ||||| || | |||||||||| |||  ||||||||||||| | |||||||||||| |||||||||| || ||| | |||  ||| |||||  ||    
T  27777440 cgagattgtgagattttgaaggagaaaggagtgaactatgataagtgagtgtcatctgaaatactgaaactcagactgtttaagtaaaatgatttagagt 27777341  T
Q  262 ttgggtttatatttatataaaaagggc-aataaattgattctttttacat-tcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgtt 359  Q
    || | ||| |||||||| ||||||||  ||||||||||||  || || || | | |  | ||||||||||| ||||| ||||||||| | |||| | |||    
T  27777340 ttagatttctatttatacaaaaaggggtaataaattgatt--ttatatatgtagagc-gagtttgggtatgggttcggggtgggtacctgtatctctgtt 27777244  T
Q  360 acccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||| ||| |||||| ||||||| |||||||| |||||||| || || ||||||||||| ||||| | | |||||||||||||    
T  27777243 acctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaa 27777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 14687402 - 14687528
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||| ||||| ||||| ||| |||||||| ||| | |||| | |||| ||||||| |||||||||||||| || | ||| |||||||||||||    
T  14687402 gtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaat 14687501  T
Q  420 caaagcagggaaaacccgtcaacttgg 446  Q
    |||||  ||||||||||| ||| ||||    
T  14687502 caaagtggggaaaacccgccaaattgg 14687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 355
Target Start/End: Original strand, 17108295 - 17108414
Alignment:
Q  234 tgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagt 333  Q
    |||||||||||||  ||| ||||| |||||  |||| ||||||||||||| ||  ||||||||||||  ||||||| ||| |||| |||||||||| |||    
T  17108295 tgattgtgtgagtgaaattatttagggtttaagtttctatttatataaaatggataataaattgatt--ttttacaatcgggatgagtttgggtataagt 17108392  T
Q  334 tcgaggtgggtacttatatccc 355  Q
    |||||||| |||||||||||||    
T  17108393 tcgaggtgtgtacttatatccc 17108414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 1012604 - 1012752
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||| |||||| || | ||||||||||| ||||| ||||||||| ||||| ||| ||||||||| | ||| | |||||| |||||||||||||| || |    
T  1012604 tttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt-aaatcggggaaaacccaaa 1012702  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    | || |||||||| |||||||| |  |||||||||||||| |||| ||||    
T  1012703 ctcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggtttg 1012752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 4230795 - 4230682
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 439  Q
    ||||||| ||||| |||||||| |||| | |||| ||||||| | |||||||||||| |||||||| ||||||||||| |||||   |||||||||||||    
T  4230795 tgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtc 4230696  T
Q  440 aacttggatttggt 453  Q
    || |||| ||||||    
T  4230695 aaattgggtttggt 4230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 15068691 - 15068552
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||| ||||||| ||||| ||||| ||| |||||||| |||||| ||| ||||||||| |||| |||||||||||||| |      
T  15068691 ctttctacattcgggtagggttcgggtatgggttcggggtggatacatatatccc-gttacctgtcccgtacccgtattttgaaatcggggaaaacccga 15068593  T
Q  401 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||| ||||| ||||| ||||| | |||||||||||||||    
T  15068592 acccatacccagacccagtcaaatcggggaaaacccgtcaa 15068552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 10297459 - 10297582
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||| |||||| ||||  ||| ||||| ||||||||||||||| ||| ||| ||||| |||| |||||||||||||| || |  || | |||||||||    
T  10297459 gggttttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaattcacatccaaaccca 10297558  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
    || ||| |||||||||||||||||    
T  10297559 ataaaatcagggaaaacccgtcaa 10297582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 405
Target Start/End: Original strand, 17469256 - 17469343
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||||||||| ||| | ||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| || |||||    
T  17469256 gggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 17469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 29416448 - 29416353
Alignment:
Q  133 atgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    |||||||||||||||||||||| |  || | | ||||||| | ||| |||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  29416448 atgactatggtgaaggagaagagaggggccaaaagtgtgagacatgaaaggagaaaagagaaaactatgataagtgagtgtcatctgaaagtctga 29416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 433
Target Start/End: Complemental strand, 30481524 - 30481393
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||||| || | ||||||||||| ||||| ||||||||| ||||||| | |||| |||||| ||| ||| |||| ||||| || ||||| || |    
T  30481524 tttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaa 30481425  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaa 433  Q
    | || || |||||||||||||| |||||||||    
T  30481424 ctcatactcaaacccaatcaaaacagggaaaa 30481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 441
Target Start/End: Complemental strand, 37961049 - 37960926
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||||| |||| |||| ||||| || |||||| ||| | |||||||||||| |||||||||||||| || || || ||||||||| |    
T  37961049 gggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaaccta 37960950  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| | || ||||||| ||||    
T  37960949 gtcaaaacgggaaaaacccatcaa 37960926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 14687263 - 14687379
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||| ||||||||||| |||||||| ||||||| ||||| ||   ||||||  ||||  ||| | ||||||||||||| |||||||||| |||||||||     
T  14687263 cgagtgcaatgttgtaatgcattatacagtaaagagatgatggtgatcgatagctataatgatgaagaagaaaaaggttgagagtgtgagatatggaaga 14687362  T
Q  184 agaaaagagaaaactat 200  Q
    |||||||||| ||||||    
T  14687363 agaaaagagagaactat 14687379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 17220765 - 17220848
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| |||||||||||||  |||||||| |||||||| || |||||   ||||||||||||||| |||||||||||    
T  17220765 tacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggt 17220848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 34139433 - 34139580
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||| |||||| || ||||||||||||| ||||| ||||||||| ||||| || |||||  |||   || ||||||||| |||||||||||||| || |    
T  34139433 tttttgcattcgggacgggtttgggtatg-gttcggggtgggtacctatatacctgttacatgtcctatatccgtgtttttaaatcggggaaaac-caaa 34139530  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    | || ||||||||||| ||||| |  |||||||||||||| |||| ||||    
T  34139531 cacatacccaaacccagtcaaaacgaggaaaacccgtcaaattgggtttg 34139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 34777051 - 34777160
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||||| |||||||||| ||||| ||||||||| || || || ||||| |||  | |||||||||||| | |||||| ||||| ||||    
T  34777051 tttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgggaaaaacccata 34777150  T
Q  402 cccaaaccca 411  Q
    ||||||||||    
T  34777151 cccaaaccca 34777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 395
Target Start/End: Complemental strand, 2183710 - 2183616
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    |||| |||||||| |  ||||||| ||||||||||| ||||||||| |||||| || |||||  |||||||||||| |||| ||||||| |||||    
T  2183710 ctttctacattcgggtagggtttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaa 2183616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 284
Target Start/End: Original strand, 5793365 - 5793554
Alignment:
Q  90 caatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaa 189  Q
    ||||||||||  ||||||||||| ||| |||||  |   ||||||||||||||||| |||||||| |||     || |||||| || |||||||||||||    
T  5793365 caatgttgtaaggcattatccagcaaagagatggag---atcgatgactatggtgatggagaagagaaacta--agggtgtgagatgtggaaggagaaaa 5793459  T
Q  190 gagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
    |||| ||||   | |||| | |||| || |||||||| | ||| || ||||||||||  ||| ||||| |||||| |||| ||||||||||||||    
T  5793460 gagagaacttaaagaagtgagtgtcgtcagaaagacttagactttggttgtgtgagtgaaatgatttagggtttgagtttctatttatataaaaa 5793554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 441
Target Start/End: Original strand, 24568929 - 24569061
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 407  Q
    |||||| || || |||| ||||| ||||| ||||| ||| ||||| |||| |||| ||| | ||||| |||| | |||||||| ||||  |||||||| |    
T  24568929 cattcgggacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccata 24569028  T
Q  408 cccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    || ||||||||||||| | |||||||||||||||    
T  24569029 cctaaacccaatcaaa-cggggaaaacccgtcaa 24569061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 405
Target Start/End: Complemental strand, 9642454 - 9642351
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||| ||||| | ||| ||  |||| |||||||||||||| | |||||||||||| |||||||||||||| || |    
T  9642454 tttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaa 9642355  T
Q  402 ccca 405  Q
    ||||    
T  9642354 ccca 9642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 441
Target Start/End: Complemental strand, 27056634 - 27056519
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    ||||| ||||| ||||||||  |||| |||||||||||||| | |||| ||  ||| |||||||| ||||| || ||||| | |||||||||  ||||||    
T  27056634 gtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagc 27056535  T
Q  426 agggaaaacccgtcaa 441  Q
      ||||||||||||||    
T  27056534 gaggaaaacccgtcaa 27056519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 35215557 - 35215670
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||| ||||| |||||||| || |  || ||||||||||  ||||| | || |||||| |    
T  35215557 ggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatc-gggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccgg 35215655  T
Q  438 tcaacttggatttgg 452  Q
    |||| |||| |||||    
T  35215656 tcaaattgggtttgg 35215670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 467
Target Start/End: Complemental strand, 29416253 - 29416125
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||||||| ||||||| |||||||| ||   ||| ||||||||||| | | | |||| ||| || || |||||||| || ||||| | |||||||||||    
T  29416253 ggtgggtacatatatcctcgttacccatcctttactcgtgttttaaa-tagagaaaaagtcaaactcatacccaaactcagtcaaaacggggaaaacccg 29416155  T
Q  438 tcaacttggatttggtccgagtggctaccc 467  Q
    |||| ||||||||||| || |||| |||||    
T  29416154 tcaaattggatttggttcgggtgggtaccc 29416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 396
Target Start/End: Complemental strand, 12468372 - 12468228
Alignment:
Q  249 aataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtactt 348  Q
    ||||||||| | |||| |||| | ||||||||||||||| ||||| |||||  ||| ||||||||  | |  |||| ||||||||||| ||| ||||| |    
T  12468372 aataatttaggatttgcgtttctctttatataaaaagggtaataagttgat--tttctacattcggaacgaatttgagtatgagttcggggttggtacct 12468275  T
Q  349 atatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    | || ||| ||||  |||||||||||||||||  |||||| |||||||    
T  12468274 acat-cccattacatgtctcgtacccgtgtttcgaaatcgaggaaaac 12468228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 14186321 - 14186409
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    ||||||||||||| ||||  |||| |||| |||||  ||||||||| || | |||||||||||| |||||| | |||||||| ||||||    
T  14186321 gggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaactcaaacccaa 14186409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 2075869 - 2075786
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||| |||||| | |||||| ||||| |||||||| ||||||||||| ||||| | | ||||| ||||||| |||| ||||||    
T  2075869 tacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggt 2075786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 11255111 - 11255005
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| |||||  |||||||| ||||| || |||| ||||| | |||||||||||  ||| | |||||||| ||||    
T  11255111 tttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagc-gggaaaacccata 11255013  T
Q  402 cccaaacc 409  Q
    ||||||||    
T  11255012 cccaaacc 11255005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 406
Target Start/End: Complemental strand, 36132014 - 36131916
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    |||||| || || |||| ||||||||||| ||||| ||| | ||| ||| |||||| || | ||| |||||||| |||| |||||||||||| ||||||    
T  36132014 cattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggggaaaactcaaacccaa 36131916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 33631988 - 33631923
Alignment:
Q  316 atgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    |||||| |||||||| ||| | ||||||||||||||||||| |||| |||| | ||||| ||||||    
T  33631988 atgggtatgggtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgtttt 33631923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 35747509 - 35747457
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatg 141  Q
    ||||||||||||| |||||||||| ||| ||||| || | |||||||||||||    
T  35747509 gcaatgttgtattacattatccagcaaagagatgatggcgatcgatgactatg 35747457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 82 - 453
Target Start/End: Original strand, 16903289 - 16903660
Alignment:
Q  82 cacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaa 181  Q
    |||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16903289 cacgagcgcaatgttgtaatgcattatcaggtaaaaagatgttgtcgatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaa 16903388  T
Q  182 ggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataa 281  Q
    |||||||||||| ||||||||||||| ||||||      ||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||    
T  16903389 ggagaaaagagagaactatgataagtgattgtc------aagactgaaactctgattgtgtgagtgaaataatttagggtttgagtttatatttatataa 16903482  T
Q  282 aaagggcaataaattga------ttctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccg 375  Q
    |||||||||||||||||      || |||||||||||| || ||||||||||||||||||| ||||||||| ||||||||| |||||  || ||||| ||    
T  16903483 aaagggcaataaattgattttttttttttttacattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacctatcccgtactcg 16903582  T
Q  376 tgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||| ||| ||||   | |||||  |||||||||||||||||   |||||| |||||||||||||||||||    
T  16903583 tgttttaaaattgggaaaaatctaaacccatgcccaaacccaatcaaagtgaggaaaatccgtcaacttggatttggt 16903660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 89 - 441
Target Start/End: Complemental strand, 42729258 - 42728910
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| ||||||||||| |||| ||||| |||| ||||||| ||||||||| |||||||| | ||  ||||||||||| ||||||||||||| |    
T  42729258 gcaatgttgtaatgcattatccattaaagagatgatgtcgatcgatgtctatggtgatggagaagagagagaccgagagtgtgatatatggaaggagaca 42729159  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    ||||| |||||||||||||   ||| |||||||||||||| ||||||| |||||||||  ||| |||||  || |  |||| ||||||||||||| ||      
T  42729158 agagagaactatgataagtgggtgttatctgaaagactgagactctgactgtgtgagtgaaatgatttagtgtataagtttctatttatataaaagggat 42729059  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
     ||||||| ||  ||| |||||||   | | ||||||||||||||||| ||| | |||  |||||||| | || ||||| |||||| |||||| ||||||    
T  42729058 gataaatttat--tttctacattcagaacgtgtttgggtatgagttcggggtagttacccatatccccatcactcgtcttgtacccatgttttgaaatcg 42728961  T
Q  389 gggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    || |||||  | ||||| | ||||||| ||||||||| |||| ||||||||||    
T  42728960 ggaaaaac-gaaacccatatccaaaccaaatcaaagc-gggataacccgtcaa 42728910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 87 - 396
Target Start/End: Original strand, 39219033 - 39219338
Alignment:
Q  87 gcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggaga 186  Q
    ||||||||||||| |||||||||||||||| ||||| ||   ||| |||| ||| |||||||||||  || |||| |||||||||  ||||| |||||||    
T  39219033 gcgcaatgttgtaatgcattatccagtaaagagatgatggtgatcaatgattatagtgaaggagaa--aagaggttgagagtgtgcgatatgaaaggaga 39219130  T
Q  187 aaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagg 286  Q
    || |||| ||||||||||||| | |||||| ||||| | ||| ||| ||| ||||||||   ||| ||||| |||||| |||| |||||||||||||  |    
T  39219131 aaggagataactatgataagtgagtgtcatatgaaaaaatgagactgtgactgtgtgagcgaaatgatttagggtttgagtttctatttatataaaagag 39219230  T
Q  287 gcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaat 386  Q
    | |||||||| ||  ||| ||||||    | | ||||||||||| ||||| ||||||||| | ||||||||||||  ||  |||||||||||||||||||    
T  39219231 gtaataaattaat--tttctacatttagaacgagtttgggtatgggttcggggtgggtacatgtatccccgttacttgttccgtacccgtgttttaaaat 39219328  T
Q  387 cggggaaaac 396  Q
    ||||||||||    
T  39219329 cggggaaaac 39219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 120 - 424
Target Start/End: Original strand, 36421576 - 36421874
Alignment:
Q  120 atgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctg 219  Q
    |||||| |||| ||||||||||||||| | ||||||| |||||||||| |    ||||| |||||||||||||| ||||||||||||| |||| ||||||    
T  36421576 atgttggcaattgatgactatggtgaatgcgaagaaagaggtcgagagag----atatgaaaggagaaaagagagaactatgataagtgattgccatctg 36421671  T
Q  220 aaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgg 319  Q
    ||||| ||| ||||||| ||||||| |  ||| |||||  ||| | |||| ||||||||||| | ||  |||||||||||  ||| || ||||| || |     
T  36421672 aaagattgagactctgactgtgtgaatgaaatgatttagagttcgagtttttatttatataagagggataataaattgat--tttctatattcgagacga 36421769  T
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    |||||||||| |||||| |||| |||| ||||||||  ||||   || ||||||||| ||||| ||| || |||||| ||||||| |||||||| ||||     
T  36421770 gtttgggtataagttcggggtgagtacctatatccctattacttatcccgtacccgtattttataattggagaaaacccatacccgaacccaaatccaaa 36421869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 381
Target Start/End: Complemental strand, 41477329 - 41476976
Alignment:
Q  26 catccctatccccgcaatcgctaatttattttaataaaaataaaagnnnnnnnagccacgagcgcaatgttgtattgcattatccagtaaaaagatgttg 125  Q
    |||||| ||||||| | | | |||||| ||| ||||||||||||||       | || |||||||||||||||| |||||| || || |||| |||| ||    
T  41477329 catccccatccccgaagtggataatttttttaaataaaaataaaagtattttcaacctcgagcgcaatgttgtaatgcattgtcaaggaaaaggatgatg 41477230  T
Q  126 tcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagac 225  Q
       ||||||||||||||| | |||||||| | ||| ||||||||||||||||| |||| || || ||| || ||||||||||   |||||||||||||||    
T  41477229 gagatcgatgactatggtaatggagaagagagaggccgagagtgtgaaatatgaaaggggataaaagagaattatgataagtgggtgtcatctgaaagac 41477130  T
Q  226 tgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgg 325  Q
     || ||| ||| ||||||| |  ||||||||| |||||   ||| | ||||||||||||||| || ||||||||  ||| | | |||| || ||||||||    
T  41477129 ggagactttgactgtgtgaatgaaataatttagggtttccatttctctttatataaaaagggtaacaaattgat--tttctgctttcgggacgggtttgg 41477032  T
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    |||||  |||| ||||||||| ||||||| ||||| ||||| ||||| ||| ||||    
T  41477031 gtatggattcggggtgggtacatatatccacgttatccgtcccgtactcgtatttt 41476976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 23490874 - 23490723
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  23490874 tttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 23490775  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| |||| |||||||||||| |||||||||||    
T  23490774 cccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggt 23490723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 49250876 - 49250725
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||||||||| ||| ||||| ||| ||||||||| | |||||||||||| | |||||||||||||||||    
T  49250876 tttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcata 49250777  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | | ||||||||||||| ||| |||||||    
T  49250776 cccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggt 49250725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 388
Target Start/End: Original strand, 8880215 - 8880520
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||| ||||| ||||| |||||||||||| ||| ||| | || | |||| ||||| |||||| |||||||| ||  ||||||| ||||| |||||    
T  8880215 agccccgagtgcaattttgtaatgcattatccagcaaagagacgatgactatcggtgactgtggtgatggagaagagaa--gtcgagattgtgagatatg 8880312  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    ||||||||||||||| || |||||||| ||| ||||| |||||||||||  ||||| | | |||||||  ||| |||||| ||||| |||| ||||||||    
T  8880313 gaaggagaaaagagagaattatgataaataagtgtcaactgaaagactgcgactctaactttgtgagtgaaatgatttaaagtttgagtttctatttata 8880412  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgt 378  Q
     |||| ||| |||||||| ||  ||||  |||| | || ||||||||||||| || |  ||||| ||| | ||||||| ||||| |||  |||| |||||    
T  8880413 aaaaaggggtaataaatttat--ttttagcatttgggacgggtttgggtatgggtccagggtggatacctttatccccattacctgtcctgtactcgtgt 8880510  T
Q  379 tttaaaatcg 388  Q
    ||| ||||||    
T  8880511 ttttaaatcg 8880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 301 - 437
Target Start/End: Complemental strand, 36187324 - 36187188
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    ||||||||||| | || ||||||||||||| ||||  ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| |||    
T  36187324 ctttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 36187225  T
Q  401 acccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||| ||||||||||| ||||| | |||||||||||    
T  36187224 acccatacccaaacccagtcaaaacggggaaaacccg 36187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 323 - 453
Target Start/End: Original strand, 17134954 - 17135084
Alignment:
Q  323 tgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 422  Q
    |||||||| ||||| ||  ||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  17134954 tgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaa 17135053  T
Q  423 agcagggaaaacccgtcaacttggatttggt 453  Q
    | ||| ||||| ||||||| |||| ||||||    
T  17135054 aacagagaaaatccgtcaaattgggtttggt 17135084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 395
Target Start/End: Complemental strand, 25155146 - 25154837
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    ||||| ||||| |||| ||||||| |||  ||| ||||| ||   |||||||||||||||||  ||||| | | ||  ||||||||||| || || ||||    
T  25155146 cgagcacaatgctgtaatgcattacccaacaaagagatgatgatgatcgatgactatggtgattgagaatatagagaccgagagtgtgagatttgaaagg 25155047  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||| ||| ||||||||||||| | |||||||| || ||| || ||||| |  |||  |||  ||||||||||||||||| |||   |||  ||||||    
T  25155046 agaaaaaagagaactatgataagtgagtgtcatctaaatgaccgagactctcacagtgatagtgaaataatttaaggtttggatttccctttgaataaaa 25154947  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||| | | ||||||||  || || ||||  || ||||||||| |||||||||| |||||||||||||||||| |||| |||| ||||| |||||||| |    
T  25154946 ggggtagtgaattgatt--ttctaaattcaggacgggtttgggcatgagttcgaagtgggtacttatatccccattactcgtcccgtactcgtgttttga 25154849  T
Q  384 aatcggggaaaa 395  Q
    ||||||| ||||    
T  25154848 aatcgggaaaaa 25154837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 45460357 - 45460159
Alignment:
Q  90 caatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaa 189  Q
    ||||||||||  ||||||||||  ||| ||||| || | |||  ||| ||||| ||||||||||| | ||||||||||||||| |||   ||||||||||    
T  45460357 caatgttgtaaagcattatccaacaaagagatgatgacgatcagtgattatggcgaaggagaagagagaggtcgagagtgtgagatacataaggagaaaa 45460258  T
Q  190 gagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataattta-aggtttgggtttatatttatataaaaaggg 287  Q
    ||||||| || ||||||| | |||||||||||||| |||||||  ||||||||||||  ||| |||||  |||||  |||| |||||||||||||||||    
T  45460257 gagaaaattacgataagtgagtgtcatctgaaagattgaaactgcgattgtgtgagtgaaatgatttaggggtttatgtttctatttatataaaaaggg 45460159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 12495012 - 12495147
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||| |||| | || ||||||||| |||||||| |||||  | ||||| ||| |||||||    
T  12495012 gggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaaccca 12495111  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||||  ||||||| ||||||| |||||||||||    
T  12495112 gtcaaagtggggaaaatccgtcaaattggatttggt 12495147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 19572615 - 19572476
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||| ||| | |||||||||||| |||||||| ||||| ||||    
T  19572615 tttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccata 19572516  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| |||||   |||||||||||||||    
T  19572515 cccatacccaaacccagtcaaaatggggaaaacccgtcaa 19572476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 417
Target Start/End: Original strand, 28297920 - 28298035
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  28297920 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 28298019  T
Q  402 cccaaacccaaaccca 417  Q
    |||| ||||| |||||    
T  28298020 cccatacccataccca 28298035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 51421844 - 51421995
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |  |||||||||| | |||||||||||| | |||||| ||||| ||||    
T  51421844 tttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccata 51421943  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| |||||   |||||||||| |||| |||| ||||||    
T  51421944 cccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggt 51421995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 303 - 453
Target Start/End: Original strand, 34611060 - 34611210
Alignment:
Q  303 ttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatac 402  Q
    ||||||||| | || ||||||||||||| ||||| |||| |||| ||||| | ||||||  ||| | |||||||||||| | |||||| ||||| |||||    
T  34611060 ttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatac 34611159  T
Q  403 ccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||| |||||||  |||||||| | ||||||||||||||| |||||||||||    
T  34611160 ccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatttggt 34611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 451
Target Start/End: Original strand, 16408944 - 16409077
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||| | |||| ||||| ||| ||||| ||||| || |||||||||| | |||||||||||| |||| ||||||||| |||||||| |||||||||||    
T  16408944 gggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaaccca 16409043  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttg 451  Q
     ||||| | ||||||||||||||| |||| ||||    
T  16409044 gtcaaaacggggaaaacccgtcaaattgggtttg 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 23058468 - 23058573
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||  |||| ||||||| ||||||||| ||||| || ||||||||    
T  23058468 gggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaaccca 23058567  T
Q  418 atcaaa 423  Q
     |||||    
T  23058568 gtcaaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 415
Target Start/End: Complemental strand, 45866288 - 45866175
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||||||| |||||||||||| | ||||||||| ||||| | | ||||| ||||| |||||||||||| |||||||||||||| ||||    
T  45866288 tttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccata 45866189  T
Q  402 cccaaacccaaacc 415  Q
    |||| |||||||||    
T  45866188 cccatacccaaacc 45866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 387
Target Start/End: Complemental strand, 48125983 - 48125701
Alignment:
Q  85 gagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagga 184  Q
    ||||||||||||||| | ||||| |||| ||| ||||| || | ||| ||||||||| |||  ||||||| | ||| ||||||||||| |||| |||       
T  48125983 gagcgcaatgttgtaatacattaaccagcaaagagatgatgacgatcaatgactatgatgattgagaagagagaggccgagagtgtgagatattgaa--- 48125887  T
Q  185 gaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
        ||||| |||||||| |||| | ||||||||||||||||||     ||  | |||||    |||||||||  ||||| |||| |||||||||||||     
T  48125886 ----agagagaactatgacaagtgaatgtcatctgaaagactga-----tg--tatgtga----aataatttagagtttgagtttctatttatataaaag 48125802  T
Q  285 gggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaa 384  Q
     || | ||||||||||  || |||||||| || | ||||||||||| ||||| ||||| ||| ||||||| ||||||||||| |||||||||||||||||    
T  48125801 cggtagtaaattgatt--ttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaa 48125704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 44615562 - 44615426
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||| | ||||||||| ||||| || |||||||||| | |||||||||||| ||||| |||||||| || || || |||||||||||    
T  44615562 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44615463  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggtc 454  Q
     ||||| | || |||||||||||| |||  |||||||    
T  44615462 gtcaaaacgggaaaaacccgtcaaattgagtttggtc 44615426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 44793007 - 44793143
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||| | ||||||||| ||||| || |||||||||| | |||||||||||| ||||| |||||||| || || || |||||||||||    
T  44793007 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44793106  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggtc 454  Q
     ||||| | || |||||||||||| |||  |||||||    
T  44793107 gtcaaaacgggaaaaacccgtcaaattgagtttggtc 44793143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 132 - 283
Target Start/End: Original strand, 13692462 - 13692613
Alignment:
Q  132 gatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaac 231  Q
    |||||||||| |||   |||||| | ||| ||||||||||| |||||||||||||||||||| |||||| |||||| | |||| ||||||||| | | ||    
T  13692462 gatgactatgatgataaagaagagagaggccgagagtgtgagatatggaaggagaaaagagagaactataataagtgagtgtcgtctgaaagagtaagac 13692561  T
Q  232 tctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| |||||||| ||  ||| ||||| ||||| ||||| |||||||||||||    
T  13692562 tctaattgtgtgggtgaaatgatttagggttttggtttctatttatataaaa 13692613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 14890932 - 14891063
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||| ||||||||||| |||||||||||| ||| ||| | || | ||||||  ||||||||| |||||||| | ||||||||| ||||| ||||||||||    
T  14890932 cgagtgcaatgttgtaatgcattatccagcaaagagacgatgccgatcgatagctatggtgatggagaagagagaggtcgagattgtgagatatggaagg 14891031  T
Q  184 agaaaagagaaaactatgataagtaattgtca 215  Q
    |||||||||| |||||| |||| ||| |||||    
T  14891032 agaaaagagagaactattataaataagtgtca 14891063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 24236864 - 24236725
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| |||||| |||||  | |||||||||||| | |||||||||||| ||||    
T  24236864 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaacccata 24236765  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||| ||||||| ||||| | || ||||||||||||    
T  24236764 cccatacctaaacccagtcaaaacgggaaaaacccgtcaa 24236725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 40087566 - 40087416
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||||||||| ||||||||| ||||| |||||||| | || | |||| ||||||| || ||||||||||||||||    
T  40087566 tttttacatttgggacgggtatgagtatgagttcggggtgggtacctatattcccgttactcatcccatacctgtgttttgaa-tcggggaaaactcata 40087468  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| |||||||| || ||||| | ||||||| ||||||| ||| |||||||    
T  40087467 cccatacccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggt 40087416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 29936402 - 29936559
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | ||||||| |||| | |||||||||||| ||||    
T  29936402 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccata 29936501  T
Q  402 cccaaacccaaacccaa------tcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| || || ||||||      ||||| | ||||||||||||||| |||| ||||||    
T  29936502 cccatactcatacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggt 29936559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 418
Target Start/End: Complemental strand, 50426742 - 50426648
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 418  Q
    ||||||| ||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| ||||| |||||| | |||||||||||||||||||||    
T  50426742 gggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagcccatacccaaacccaaacccaa 50426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 5181047 - 5181176
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| ||| | ||||||| | ||||| ||||||||||||| | ||||||| |||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  5181047 gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaa 5181146  T
Q  424 gcagggaaaacccgtcaacttggatttggt 453  Q
       ||||||||||||||| ||| |||||||    
T  5181147 atggggaaaacccgtcaaattgaatttggt 5181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 9982987 - 9982842
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 407  Q
    |||||| |||||||||||||||| ||||| ||||||||| ||||| | |||||||| || | | |||||||||| |||| |||||||| ||| || || |    
T  9982987 cattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaaactcata 9982888  T
Q  408 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||| ||||| | | ||||| || |||| |||||||||||    
T  9982887 cccaaacccagtcaaaacggagaaaatccatcaaattggatttggt 9982842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 24710871 - 24710984
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 439  Q
    ||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||| || | ||||||||| ||||| | |||||||||||||    
T  24710871 tgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtc 24710970  T
Q  440 aacttggatttggt 453  Q
    || ||| |||||||    
T  24710971 aaattgaatttggt 24710984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 13798198 - 13798375
Alignment:
Q  274 ttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacc 373  Q
    |||||||||| ||| ||||||||||||  || ||||||   ||||||||| ||||||| || | ||||| ||  ||||||| |||||||| |||| ||||    
T  13798198 ttatataaaaggggtaataaattgatt--ttctacatttaggatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcatacc 13798295  T
Q  374 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||| |||||||| ||||| || || || ||||||||||| ||| | | |||||||||||| || |||| ||||||    
T  13798296 cgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggtttggt 13798375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 441
Target Start/End: Complemental strand, 10778706 - 10778531
Alignment:
Q  266 gtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    |||| |||||||||||||||||  | |||   ||| |||||||||| | || |||| || ||||| ||||| ||||| ||  |||| |||||||||||||    
T  10778706 gtttctatttatataaaaaggggtaaaaaaatattttttttacatttgagacgggtatgagtatgggttcggggtggatatctataaccccgttacccgt 10778607  T
Q  366 ctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    | | |||||||||||| |||||||| |||||| | || || ||||||||||| ||||||| |  ||||||||||||    
T  10778606 cccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagcggaaaaaacccgtcaa 10778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 18354183 - 18354032
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || | || |||||||  ||||| |||||| |||||||| ||||||||||||| | ||||| |||||| |||||||||||||| ||||    
T  18354183 tttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccata 18354084  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| |  |||| ||| ||||| | || |||||||||||| ||| |||||||    
T  18354083 cccatattcaaatccagtcaaaacgggaaaaacccgtcaaattgaatttggt 18354032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 423
Target Start/End: Complemental strand, 35069994 - 35069871
Alignment:
Q  300 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||| |||||||| |  ||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| |||||||| || | |||||||||||||||||    
T  35069994 tctttctacattcgggtagggtttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactca 35069895  T
Q  400 tacccaaacccaaacccaatcaaa 423  Q
     || || ||||||| ||| |||||    
T  35069894 aactcatacccaaatccagtcaaa 35069871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 42707917 - 42707819
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| ||||| |||| |||||||||| ||||||||||||| | |||||||||||| ||||||| |||||||||||| || ||||||||||| |||||    
T  42707917 gggtatgggttcg-ggtgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 319 - 417
Target Start/End: Complemental strand, 34673368 - 34673270
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||| ||||| |||||||||||| |||| ||| ||||| || ||||| |||||||||||    
T  34673368 ggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaaccca 34673270  T

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Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 394
Target Start/End: Complemental strand, 10450163 - 10450070
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa 394  Q
    |||| |||||||| |  ||||||||||||||||||| ||||||||| |||||||| |||||||| | ||||||||| ||||||||| |||||||    
T  10450163 ctttctacattcgggtagggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaattggggaaa 10450070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 453
Target Start/End: Original strand, 23968621 - 23968716
Alignment:
Q  358 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||| | |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||   ||||||| ||||||| |||| ||||||    
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggt 23968716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 453
Target Start/End: Complemental strand, 43513205 - 43512982
Alignment:
Q  227 gaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttggg 326  Q
    ||||||||||||||  ||||  ||| ||||| |||||| |||| ||||||||||||||| |  ||||||||||  ||||||||||||  | ||||||| |    
T  43513205 gaaactctgattgtacgagtgaaattatttagggtttgagtttctatttatataaaaagagttataaattgat--tttttacattcgaaacgggtttgag 43513108  T
Q  327 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 426  Q
    |||||||| |||||  ||   |||||||  |||||  || || |||||||||||| ||||||| ||||||||| || || || |||||| ||| || ||     
T  43513107 tatgagtttgaggttagtgtctatatccatgttacttgtttcatacccgtgtttt-aaatcggagaaaactcaaacgcatactcaaacctaatgaatgcg 43513009  T
Q  427 gggaaaacccgtcaacttggatttggt 453  Q
     || |||||||||||  ||||||||||    
T  43513008 agggaaacccgtcaaactggatttggt 43512982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 454
Target Start/End: Complemental strand, 29871384 - 29871236
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||| || ||||||||||||||||||  ||||||||| ||||| || |||||| ||| | ||||| |||||| ||||||| |||||| || || ||    
T  29871384 tacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaacccaaactca 29871285  T
Q  406 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtc 454  Q
     ||||||||  | ||||| |  |||||||||||||| |||  |||||||    
T  29871284 tacccaaacttagtcaaaacgaggaaaacccgtcaaattgagtttggtc 29871236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 441
Target Start/End: Original strand, 34085242 - 34085360
Alignment:
Q  323 tgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 422  Q
    |||||||| ||||| ||||||||| |||| ||||||||||| || | ||| |||||||| |||||||| ||||| || || || | || |||||| ||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  423 agcagggaaaacccgtcaa 441  Q
    ||| | |||||||||||||    
T  34085342 agcggagaaaacccgtcaa 34085360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 205
Target Start/End: Original strand, 14902910 - 14903031
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||| ||||||| ||| |||||||||||| ||| ||| | || |  |||||  |||| |||| |||||||| | ||| ||||| ||||| ||||||||||    
T  14902910 cgagtgcaatgtggtaatgcattatccagcaaagagacgatgccggtcgatagctattgtgatggagaagagagaggccgagattgtgagatatggaagg 14903009  T
Q  184 agaaaagagaaaactatgataa 205  Q
    |||||||||| |||||||||||    
T  14903010 agaaaagagagaactatgataa 14903031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 405
Target Start/End: Complemental strand, 34060106 - 34060025
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||| |||||  |||||||| ||||| || |||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  34060106 gggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaatcgaggaaaactcataccca 34060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 381
Target Start/End: Complemental strand, 5283762 - 5283617
Alignment:
Q  234 tgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagt 333  Q
    ||||||||||||   ||| |||||| ||||| |||  |||||||| |||| ||   |||||||||||  || |||| ||  || |||||| |||||||||    
T  5283762 tgattgtgtgagagaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatt--ttctacaatccagacgggtttaggtatgagt 5283665  T
Q  334 tcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    ||||||||||||||| ||||||| ||||||||| ||||| | ||||||    
T  5283664 tcgaggtgggtacttctatccccattacccgtcccgtactcatgtttt 5283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 3628064 - 3627985
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||| ||||| ||||||||| || || ||||||||||||| | |||||||||||| ||||||||||||||  |||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacctataccca 3627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 441
Target Start/End: Complemental strand, 19003733 - 19003630
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||| ||| ||||||||||||| ||||| | ||||||| ||||  ||||||||||||| |  ||||| ||||||||| | ||||| | |||||||||||    
T  19003733 ggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccg 19003634  T
Q  438 tcaa 441  Q
    ||||    
T  19003633 tcaa 19003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 33293588 - 33293513
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||||| ||||||||| | |||||||||||| |||||||| ||||| || || || |||||||||||||||||    
T  33293588 tatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaa 33293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 375 - 453
Target Start/End: Original strand, 13390456 - 13390533
Alignment:
Q  375 gtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||| ||||| | ||| ||||||||||| |||| ||||||    
T  13390456 gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaac-ggggaaacccgtcaaattgggtttggt 13390533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 16237391 - 16237313
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||| ||||| |||  |||| ||||||| ||||||||||| | ||||||| |||| ||||||||||||||    
T  16237391 gggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaac 16237313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 17092062 - 17091941
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||| ||| ||||| |||| || | ||||| |||||||| |||| | |||| ||||| |||||||||||||||||||||    
T  17092062 tttttacatttgggacgggtatgggcatgggttcggggtgagtgcctatatacccgttacgcgtcccatacctgtgttataaaatcggggaaaactcata 17091963  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    | || | |||||| || |||||    
T  17091962 ctcatatccaaactcagtcaaa 17091941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 395
Target Start/End: Complemental strand, 12718858 - 12718782
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    |||||||||||| ||||  ||||||||| |||||  |||||||||||||||||| ||| || | |||||||||||||    
T  12718858 ggtttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgtacacgtattatgaaatcggggaaaa 12718782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 18044461 - 18044373
Alignment:
Q  106 tatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaa 194  Q
    ||||||| ||| ||||| || |||||||||||||||||||||||||||| | ||  ||||| ||||| | ||| ||| |||||||||||    
T  18044461 tatccagcaaagagatgatgacaatcgatgactatggtgaaggagaagagagagaccgagaatgtgagacatgaaagaagaaaagagaa 18044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 406
Target Start/End: Complemental strand, 16433252 - 16433166
Alignment:
Q  317 tgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    |||||||||||||| ||||| ||   |||| |||||  |||||||||||| | |||||||||||| ||||||| ||||||||| ||||||    
T  16433252 tgggtttgggtatgggttcgggg---gtacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaa 16433166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 280
Target Start/End: Original strand, 25180968 - 25181170
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||||||||||||||| |||||||||||  ||||| ||  |  | ||  |||| ||||||||  ||||| | | ||| || |||||||| |||||    
T  25180968 agccccgagcgcaatgttgtaatgcattatccaacaaaaatattataacgattaatgattatggtgattgagaaaagagaggccgggagtgtgagatatg 25181067  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaag-gtttgggtttatatttat 277  Q
    ||||||||||||| | || | | |||||| | | |||||||||||||  | ||||| | | |||||||  ||| ||||||| |||| ||||| |||||||    
T  25181068 gaaggagaaaagaaagaattgtaataagtgagtatcatctgaaagacaaagactctaactatgtgagtgaaattatttaagagtttaggtttctatttat 25181167  T
Q  278 ata 280  Q
    |||    
T  25181168 ata 25181170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 48576184 - 48576064
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaact------catacccaaacccaaacccaatcaaagcagggaaa 432  Q
    ||||| |||| ||||||| ||||||||||| |||| ||||||| | || ||||||||||      |||||||| ||||||||| | |||||   ||||||    
T  48576184 gtgggcacttttatccccattacccgtctcatacctgtgttttgagattggggaaaactctaacccatacccatacccaaacctagtcaaaatggggaaa 48576085  T
Q  433 acccgtcaacttggatttggt 453  Q
    |||| |||| |||||||||||    
T  48576084 acccatcaatttggatttggt 48576064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 2514811 - 2514895
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaaccc-aaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| |||| ||||||||| || || || |||| ||||||||||||| | |||||||||| |||| |||| ||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggtttggt 2514895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 39616333 - 39616417
Alignment:
Q  357 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||   |||||||||||| |||| ||||||||| ||||| || |||||||| || ||||| | |||||||| ||||||    
T  39616333 gttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaa 39616417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 5293725 - 5293606
Alignment:
Q  88 cgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaa 187  Q
    |||||||||||| | |||||| ||| ||| |||||  | | |||||||  |||| ||| |||||| | | ||||||||| ||||| |||||||| || ||    
T  5293725 cgcaatgttgtaattcattatacagcaaagagatgacggcgatcgatggttatgatgatggagaatagagaggtcgagattgtgagatatggaatgaaaa 5293626  T
Q  188 aagagaaaactatgataagt 207  Q
    |||||| |||||| ||||||    
T  5293625 aagagagaactatcataagt 5293606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 440
Target Start/End: Original strand, 13020651 - 13020717
Alignment:
Q  374 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtca 440  Q
    |||||||| |||||||||||||| |||||||| | ||||||||| ||||  | | ||||||||||||    
T  13020651 cgtgttttgaaatcggggaaaacccatacccataaccaaacccagtcaagacggagaaaacccgtca 13020717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 453
Target Start/End: Original strand, 28298045 - 28298083
Alignment:
Q  415 ccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  28298045 ccaatcaaaacagggaaaacccgtcaaattggatttggt 28298083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 396
Target Start/End: Complemental strand, 47644996 - 47644869
Alignment:
Q  266 gtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    |||| ||||||||||||| ||  |||||||| ||| |||| ||||||| || | || ||| |||||||||| ||| ||||||| ||| ||| ||| ||||    
T  47644996 gtttctatttatataaaagggataataaatt-attatttt-acattcgggacgagtatggatatgagttcggggtaggtacttctat-cccattatccgt 47644900  T
Q  366 ctcgtacccgtgttttaaaatcggggaaaac 396  Q
    | |||||| ||||||| | ||||||||||||    
T  47644899 cccgtacctgtgttttgagatcggggaaaac 47644869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 425
Target Start/End: Complemental strand, 48312730 - 48312684
Alignment:
Q  379 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||||||| || | ||||||||||| |||||||||||    
T  48312730 tttaaaatcggggaaaacccaaatccaaacccaaatccaatcaaagc 48312684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 23719510 - 23719622
Alignment:
Q  221 aagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatggg 320  Q
    |||||||| |||| || ||||| |||  ||| |||||  ||||| |||| ||||||||||||||||| | ||||||||   ||| |||||||| || | |    
T  23719510 aagactgagactcagactgtgttagtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga---tttgtacattcgggacgag 23719606  T
Q  321 tttgggtatgagttcg 336  Q
    |||| |||||||||||    
T  23719607 tttgagtatgagttcg 23719622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 35936896 - 35936819
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacc 415  Q
    ||||||||| ||||| ||||||| ||||| | ||| |||| ||| |||||||||||||| || || || |||||||||    
T  35936896 ggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaaactcatacccaaacc 35936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 13390399 - 13390455
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgt 358  Q
    |||||||||| | || |||| |||||||||||||| ||||||||| ||||| |||||    
T  13390399 tttttacatttgggacgggtatgggtatgagttcggggtgggtacctatatacccgt 13390455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 36617382 - 36617482
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgtttta-aaatcggggaaaactcatacccaaacccaaacccaatc-aaagcagggaaaacc 435  Q
    ||||||||| ||||| | |||||  |||| ||||||| ||||||  |||||| |||||||||| || || | | |||||||||| |||||||||||||||    
T  36617382 ggtgggtacctatattctcgttattcgtcccgtacccatgtttttgaaatcgtggaaaactcaaactcatatctaaacccaatcaaaagcagggaaaacc 36617481  T
Q  436 c 436  Q
    |    
T  36617482 c 36617482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 84 - 470
Target Start/End: Original strand, 29664740 - 29665121
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||||||||| |||||||||||| || |||||| || | |||||||||||||||||  ||||||| | ||| | ||||||| | |||| ||| |    
T  29664740 cgagcgcaatgttgtaatgcattatccagcaacaagatgatgacgatcgatgactatggtgattgagaagagagaggccaagagtgttagatattgaaag 29664839  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| || |||||||||| | |||||||||||| ||||| |||||||   ||| | |  ||| |||||  ||||| |||| |||||| ||||||    
T  29664840 agaaaagagagaattatgataagtgagtgtcatctgaaatactgagactctgacaatgtaaatgaaatgatttagagtttgagtttctatttaaataaaa 29664939  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||| | |||||||||  ||| |||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| ||  ||||||||||||| |    
T  29664940 ggggtagtaaattgat--tttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttga 29665037  T
Q  384 aatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccaca 470  Q
    ||||  ||| ||| || || || || ||||| |||||||||| || |||||||||||| ||| ||||||| | || || ||||||||    
T  29665038 aatc--ggagaacccaaactcatacacaaactcaatcaaagc-ggaaaaacccgtcaaattgaatttggttcaagcggatacccaca 29665121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 84 - 396
Target Start/End: Original strand, 6809934 - 6810237
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||| ||||||||| |||||||||||| |||| |||| || | ||| ||  ||||| ||| |||||||| | ||| ||| | ||||| | ||||||||    
T  6809934 cgagcgtaatgttgtaatgcattatccagcaaaa-gatgatgacgatcaattgctatgatgatggagaagagagaggccgaaattgtgagacatggaagg 6810032  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| ||||||||||| |||  |||| |||||| || ||      ||||||||||||  ||| ||||||||||||||||| |||| ||||||||    
T  6810033 agaaaagagagaactatgataaataagggtcaactgaaataccga------gattgtgtgagtgaaatcatttaaggtttgggtttctattgatataaaa 6810126  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||||||||||||||||  ||   |||||| |||||||||||||||| ||||| |||| |||||||||||| ||||||||||  |||||||||||| |||    
T  6810127 ggggcaataaattgatt--ttcaccattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaa 6810224  T
Q  384 aatcggggaaaac 396  Q
    |||||||||||||    
T  6810225 aatcggggaaaac 6810237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 79 - 396
Target Start/End: Complemental strand, 18452208 - 18451895
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| ||| |||||||||||| |||||||||||| |||||||||||| | || ||||||||| |||||||||||||||||||||||||  ||||  ||||    
T  18452208 agccccgaacgcaatgttgtaatgcattatccagcaaaaagatgttggcgattgatgactatagtgaaggagaagaaaaaggtcgaga--gtgagttatg 18452111  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    ||||||||||||||| ||| ||||||||| | | ||||||||||||| || ||| | | |||||||||  ||| || |||| || |  ||| |||| |||    
T  18452110 gaaggagaaaagagagaaccatgataagtgactatcatctgaaagaccgagactttaactgtgtgagtgaaatgatctaagattcgtatttctattaata 18452011  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgt 378  Q
    ||||| ||  |||||||||||  ||| |||| ||| || | |||||  |||||||||| ||||||||||||||||   |||||  |||||||||| || |    
T  18452010 taaaagggataataaattgat--tttctacaatcgggacgagtttgattatgagttcggggtgggtacttatatctgtgttacatgtctcgtacctgtat 18451913  T
Q  379 tttaaaatcggggaaaac 396  Q
    ||| ||||||||||||||    
T  18451912 tttcaaatcggggaaaac 18451895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 93 - 441
Target Start/End: Complemental strand, 40187967 - 40187622
Alignment:
Q  93 tgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagag 192  Q
    ||||||| ||||||||| || | | ||||| | || || |||| ||||||||| |||||||| | ||  ||||||||||| |||||||| |||| |||||    
T  40187967 tgttgtaatgcattatctaggatagagatgatatcgatagatggctatggtgatggagaagagagagaccgagagtgtgagatatggaatgagataagag 40187868  T
Q  193 aaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaata 292  Q
    | ||||||||||||| | |||||||||||||| ||||||||||| | |||||||  ||| ||||| | |||   ||  |||||||||||||  || ||||    
T  40187867 agaactatgataagtgagtgtcatctgaaagattgaaactctgactatgtgagtaaaatgatttaggattttcattactatttatataaaagaggtaata 40187768  T
Q  293 aattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggga 392  Q
    |||| ||  ||| || ||||| || | ||||||||||||||| | ||||  ||| |||||| ||||||||||||||| ||||||||||| |||| |||||    
T  40187767 aattaat--tttctatattcgggacgagtttgggtatgagtttg-ggtgaatacctatatctccgttacccgtctcgcacccgtgttttgaaattgggga 40187671  T
Q  393 aaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| || || ||   ||||||||| |||||||  ||||||||||||||    
T  40187670 aaacccaaactcatttccaaacccagtcaaagcgaggaaaacccgtcaa 40187622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 129 - 419
Target Start/End: Complemental strand, 27900673 - 27900388
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||| ||||| ||||||| |||||| ||||||  ||||| | ||||||||||||||||||    
T  27900673 atcgatgactatggtgatggagaagaaagagg-cgagagtatgagatatgtaaggagataagagagaactatattaagtgagtgtcatctgaaagactga 27900575  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
       ||||| ||||||| |  ||| ||||| |||||  |||| |||||||||||||  || ||||||||||||  || |||||||| |  || ||||||||    
T  27900574 t--tctgaatgtgtgactgaaatgatttagggtttcagtttctatttatataaaagaggaaataaattgatt--ttatacattcggggcggatttgggta 27900479  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    || ||||||| ||||||| ||||||| | ||||||||| | ||||| |||||| |||||||| |||||||| ||| | | |||||||||||    
T  27900478 tgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 398
Target Start/End: Original strand, 8020383 - 8020696
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||||||||  ||||| |||| |||||||||||  ||| ||||  ||   |||||||||||||||||  ||||||||| |||| |||||||||| || ||    
T  8020383 agccacgagtacaatgctgtaatgcattatccaacaaagagataatgatgatcgatgactatggtgattgagaagaaagaggttgagagtgtgatatttg 8020482  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    | ||||||||| | | ||||||||| |||    ||||| ||||||||||| ||||||| ||| ||||| |||||||||| ||||| |||||   ||||||    
T  8020483 gtaggagaaaaaaaagaactatgatgagt----gtcatttgaaagactgagactctgactgtttgagtggaataatttagggtttaggttttcctttata 8020578  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgt 378  Q
    ||||| ||| | ||||||||||  || |||||||   | ||||||| ||||||||||||| || |||| |||||||| ||||||| |   ||||||||||    
T  8020579 taaaaggggtagtaaattgatt--ttctacattcagaacgggtttgcgtatgagttcgagatgagtacctatatccctgttacccattcagtacccgtgt 8020676  T
Q  379 tttaaaatcggggaaaactc 398  Q
    ||| ||||||||||||||||    
T  8020677 tttgaaatcggggaaaactc 8020696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 94 - 399
Target Start/End: Original strand, 17152948 - 17153251
Alignment:
Q  94 gttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagaga 193  Q
    |||||| ||||||||||||||||  |||| || | || |||| |||| ||||||||||||| | ||| ||||||||||| ||||||||| |||||| |||    
T  17152948 gttgtaatgcattatccagtaaagtgatgatgacgattgatggctatagtgaaggagaagagagagggcgagagtgtgagatatggaagaagaaaataga 17153047  T
Q  194 aaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataa 293  Q
     ||||||||||||| | | |||| |||||||||||   ||||| |||||||||  ||| ||||| | ||||| ||| ||||||| || || ||| |||||    
T  17153048 gaactatgataagtgaatctcatttgaaagactgagtatctgactgtgtgagtgaaattatttaggttttggatttctatttatctagaaggggtaataa 17153147  T
Q  294 attgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaa 393  Q
    ||||||  ||| |||||||| || ||||||||||||| ||| | | || |||| ||||||   |||| ||||| ||||||| ||||||||||||||  ||    
T  17153148 attgat--tttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcggaaaa 17153245  T
Q  394 aactca 399  Q
    ||||||    
T  17153246 aactca 17153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 300
Target Start/End: Original strand, 35583881 - 35584101
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||  | | |||||||||||||||||||||||||  | | | ||||||||||  |||||    
T  35583881 agccacgagcgcaatgttgtaatgcattatccaacaaagagatgacgacgatcgatgactatggtgaaggagaagggagatgccgagagtgtgggatatg 35583980  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
     |||||||||| ||| |||  |||||| | | || ||||||||||||||| ||||||| ||||||||   ||| ||||| |||||| |||| ||||||||    
T  35583981 aaaggagaaaacagagaacagtgataaatgagtgacatctgaaagactgagactctgactgtgtgagcaaaatgatttagggtttgagtttctatttata 35584080  T
Q  279 taaaaagggcaataaattgatt 300  Q
    | ||||||| ||||||||||||    
T  35584081 t-aaaagggtaataaattgatt 35584101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 441
Target Start/End: Original strand, 38972691 - 38973046
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||| | | | ||||||||| || ||| ||| | || ||||||||| ||||||| | |||||||| | ||   |||||||||| ||||| ||||    
T  38972691 cgagcgcaatatagaaatgcattatctaggaaatagacgatgacaatcgatggctatggtaatggagaagagagagacagagagtgtgatatatgaaagg 38972790  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| |||||| ||||||||||||| | |||||| ||||||| | | ||||| |  |||||| |  ||| ||||| |||||  ||||  ||||||||||||    
T  38972791 agataagagagaactatgataagtgagtgtcatatgaaagatttagactctaacagtgtgaatcaaatgatttagggtttcagtttcgatttatataaaa 38972890  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||  |||||||||||  ||| | |||| | |||||||||| ||||| ||||| ||||||||| ||||| |||||||||  || | ||||| |||||| |    
T  38972891 gggttaataaattgat--tttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttga 38972988  T
Q  384 aatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||| ||||| || || || ||| ||||||| ||||| | ||||||||| |||||    
T  38972989 aatcgggaaaaacccaaactcatacctaaacccagtcaaaacggggaaaacctgtcaa 38973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 4583104 - 4583255
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||| | |||||| || ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  4583104 tttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 4583203  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||||||||| | ||||||||||||||| |||| ||||||    
T  4583204 cccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggt 4583255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 5908792 - 5908641
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||| | |||| |||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  5908792 tttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 5908693  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| |||||||||||||||||   ||||||||||||||| |||| ||||||    
T  5908692 cccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggt 5908641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 12866655 - 12866504
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| || |||||||||| | ||||| |||||| ||||||| |||||||||||    
T  12866655 tttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcata 12866556  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| |||||   ||||||||||||||| |||||||||||    
T  12866555 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggt 12866504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 79 - 441
Target Start/End: Complemental strand, 16311599 - 16311258
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||||||||||||||| || |||||| |  ||| ||||| || | ||||||| ||||||||| |||||||| | ||||||||| ||||| |||||    
T  16311599 agccccgagcgcaatgttgtaatgaattatcaaacaaagagatgatgacgatcgatggctatggtgatggagaagagagaggtcgagattgtgagatatg 16311500  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    ||||||||||||||                  ||||| |||||||||||| |||  || | || ||||  ||| ||||| ||||||| ||| ||||||||    
T  16311499 gaaggagaaaagag------------------tgtcaactgaaagactgagactgagactctgcgagtaaaatgatttagggtttgg-tttctatttata 16311419  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgt 378  Q
    ||||| ||  ||||||||||||  ||  ||||||| ||  ||||||  |||| ||||| ||||||||| |||||||| |||| ||||||||||| |||||    
T  16311418 taaaagggataataaattgatt--ttcaacattcgagacaggtttgaatatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgt 16311321  T
Q  379 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||| |||||||  |||||||| || || | ||||||||||||||||| || |||| |||||||    
T  16311320 tttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaa 16311258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 4920811 - 4920962
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||| ||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  4920811 tttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 4920910  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| | | ||||||||||||| |||| ||||||    
T  4920911 cccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggt 4920962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 89 - 425
Target Start/End: Original strand, 24207464 - 24207792
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||| ||| ||||||||  |||||| ||||| |||| ||||||| ||||||||  | | |||| | |||| |||||||||| |||  ||||||||||    
T  24207464 gcaatgtagtaatgcattattaagtaaagagatgatgtctatcgatgtctatggtggtgaaaaagagagaggttgagagtgtgagataatgaaggagaaa 24207563  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    ||||| |||||| |||||| | |||||||||||||||||| ||||   | ||||||||  | | ||||| |||||  |||| ||||||||||||| |       
T  24207564 agagagaactattataagttagtgtcatctgaaagactgagactc---tagtgtgagtgaagttatttagggttttagtttttatttatataaaaggatt 24207660  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtggg--tacttatatccccgttacccgtctcg-tacccgtgttttaaaa 385  Q
    |||||||| ||  ||| |||||||     |||||||||||||  |||  ||||||  |||||||||||| ||||  ||| ||| |||| ||||||| |||    
T  24207661 aataaattaat--tttctacattc-----gggtttgggtatggcttcagggtgggtatacttatatccctgttattcgt-tcgatacctgtgttttgaaa 24207752  T
Q  386 tcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||| ||||| |||||||| ||||||||||    
T  24207753 tcggggaaaactcaaacccatacccaaactcaatcaaagc 24207792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 28569106 - 28568986
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||  |||| |||||||||||||  || || || ||||||||||| ||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  421 aaagcagggaaaacccgtcaa 441  Q
    ||| |||||||||||||||||    
T  28569006 aaatcagggaaaacccgtcaa 28568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 321 - 440
Target Start/End: Complemental strand, 20973581 - 20973462
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||| ||||||||| ||||| |||||||||| || | ||||||||||| ||||||||||||||| |||||||| | ||||||||| ||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtc 20973482  T
Q  421 aaagcagggaaaacccgtca 440  Q
    ||| | ||||||||||||||    
T  20973481 aaaacggggaaaacccgtca 20973462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 10127066 - 10127210
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| |||||       ||||||| | |||||||||||| | |||||||||||| ||||    
T  10127066 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccata 10127158  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  10127159 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 10127210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 15890192 - 15890342
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||||| |||||| ||||    
T  15890192 tttttacatttgggacgggtatgggtatgggttcg-ggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccata 15890290  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || | ||||||| | ||||| | || |||||||||||| |||||||||||    
T  15890291 cacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggt 15890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 30996581 - 30996731
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||||| || ||||| ||||||||| ||||| ||||||||| ||| | ||| |||||||||||||||| |||||| ||||    
T  30996581 tttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaaacccata 30996680  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || ||||||||||| ||||| | ||||||| ||||||| |||| ||||||    
T  30996681 ctcatacccaaacccagtcaaaac-gggaaaatccgtcaaattgggtttggt 30996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 84 - 365
Target Start/End: Complemental strand, 7350727 - 7350448
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||||||||| ||||||||||||   | ||||| | || ||||||| ||||||||| |||||||| |  |||||||| ||||| ||||||||||    
T  7350727 cgagcgcaatgttgtaatgcattatccagggtagagatgatatcgatcgatggctatggtgatggagaagagaggggtcgagaatgtgagatatggaagg 7350628  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| |||||| ||||||||||||| |  ||| ||| ||||| ||  ||||| | | |||||||  ||| ||||| ||||| | ||  |||||||||||||    
T  7350627 agataagagagaactatgataagtgagcgtcgtctcaaagattgcgactctaactatgtgagtaaaatgatttagggtttcgattactatttatataaaa 7350528  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
      |  |||||||| ||  ||| |||||| | || ||||||  ||||| ||||| ||||| | | ||||||||| ||||||||    
T  7350527 gcgataataaattaat--tttctacatttgagacgggtttaagtatgggttcggggtggatgcctatatccccattacccgt 7350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 17853396 - 17853258
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| |||||  |||||||  |||||  |||||||||||| | ||||||||||| ||| ||||||||||| ||||    
T  17853396 tttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtgtttgaaa-tcggggaaaacccata 17853298  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
     ||| ||||||||||||||||| | |||||||||||||||    
T  17853297 tccatacccaaacccaatcaaaacggggaaaacccgtcaa 17853258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 29246055 - 29245916
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||||||| |||||||| ||| | ||||||||| ||||| |  ||||  |||| | |||||||||||| ||||||| |||||||||||    
T  29246055 tttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcata 29245956  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||| | ||||| | |||||||||||||||    
T  29245955 cccatacccaaacctagtcaaaacggggaaaacccgtcaa 29245916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 33728069 - 33727954
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||  |||||||| | ||||||||||||||| | ||||||| |||    
T  33728069 ggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccg 33727970  T
Q  438 tcaacttggatttggt 453  Q
    |||| |||| ||||||    
T  33727969 tcaaattgggtttggt 33727954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 40517807 - 40517942
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| ||||| ||||| ||||||||  ||||| |||||||||| || | ||||||||||||   |||||||||||| |||||||| |||||||||||    
T  40517807 gggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaaccca 40517906  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| | || |||| ||||||| ||| |||||||    
T  40517907 gtcaaaacgggaaaaatccgtcaaattgaatttggt 40517942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 89 - 394
Target Start/End: Original strand, 12457292 - 12457594
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||| | |||||||||||  ||| ||||| ||   ||||||||||||||||| |||||| ||| ||  ||||| ||||| ||||||| ||||||     
T  12457292 gcaatgttgcaatgcattatccaacaaatagatgatggtgatcgatgactatggtgatggagaaaaaagaga-cgagattgtgagatatggagggagaag 12457390  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    ||||| |||| | | |||| |   |||| ||| ||||| | ||  |||||||||||||  ||| |||||   ||| ||||| ||||||||| ||| |||     
T  12457391 agagagaactttaagaagtgagattcatatgagagactaagaccatgattgtgtgagtgaaatgatttagactttaggtttctatttatattaaaggggt 12457490  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    |||||||||||  ||| |||||||| || |||||||||||||||||||  ||| ||  |||||||   |||||| ||| | ||||||| |||| ||||||    
T  12457491 aataaattgat--tttctacattcgggacgggtttgggtatgagttcggagtgagtgtttatatctatgttacctgtcccatacccgtattttgaaatcg 12457588  T
Q  389 gggaaa 394  Q
     |||||    
T  12457589 aggaaa 12457594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 23045096 - 23044956
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  |||||| |||||| ||||| ||||||||| |||||| ||||||||| || ||||||||| |||| ||||||||||||||  |     
T  23045096 ctttctacattcgggtagggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaa 23044997  T
Q  401 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||| |||||||| || |||||   || ||||||||||||    
T  23044996 acccatacccaaactcagtcaaattgggaaaaacccgtcaa 23044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 2681217 - 2681340
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||| |||| |||||||| |||||| || |||||| || |||| |||||||||||||| || || ||  ||||||| ||    
T  2681217 gggtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactca 2681316  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| | |||||||||||||||    
T  2681317 gtcaaatcggggaaaacccgtcaa 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 12834678 - 12834539
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||| ||||| ||||| || |||||||||| | || || |||||| |||| || |||||| ||||    
T  12834678 tttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccata 12834579  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| |||||   |||||||||||||||    
T  12834578 cccatacccaaacccagtcaaaatggggaaaacccgtcaa 12834539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 42987583 - 42987432
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| | ||||||| |||||  ||||||| |||| | |||||||||||| | |||||||||||  ||||    
T  42987583 tttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgagatcggggaaaatccata 42987484  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||  |||||||| || ||||| | || |||||||| ||| ||| |||||||    
T  42987483 cccgtacccaaactcagtcaaaacgggaaaaacccgccaaattgaatttggt 42987432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 12712645 - 12712567
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| ||||| ||||||||| |||| ||||||| ||||||    
T  12712645 gggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 6092565 - 6092482
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||| | |||||||||||| || ||| |||||||    
T  6092565 tacccgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggt 6092482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 385
Target Start/End: Complemental strand, 35194089 - 35194010
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaa 385  Q
    |||||||| || ||||||| ||||||||| | ||||||||| ||||| ||||||||||||| | ||||||||||||||||    
T  35194089 tacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttaaaa 35194010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 12773909 - 12773831
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| ||||| ||||||||| |||| ||||||| ||||||    
T  12773909 gggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12773831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 13402071 - 13401957
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 438  Q
    |||||||| || || ||||||||||||  | ||||||||||| ||||||||| |||||||||||||| ||||||||| | ||||| | |  |||| ||||    
T  13402071 gtgggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgt 13401972  T
Q  439 caacttggatttggt 453  Q
    ||| |||| ||||||    
T  13401971 caaattgggtttggt 13401957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 458
Target Start/End: Complemental strand, 32575071 - 32574885
Alignment:
Q  271 tatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgt 370  Q
    ||||||||||||| ||| |||||||||||   || |||||||| |  |||||||||| || ||||| | ||||||| |||||||  ||||||| || |||    
T  32575071 tatttatataaaaggggtaataaattgata--ttctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgt 32574974  T
Q  371 acccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca-atcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    | | ||||||| |||||||||||||| || |||    ||||||||||  ||||||| || |||||| |||||  |||||||||| ||||    
T  32574973 atctgtgttttgaaatcggggaaaacccaaacctgtccccaaacccaggtcaaagcgggaaaaacctgtcaaaatggatttggttcgag 32574885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 18116611 - 18116547
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  18116611 ctttttacattcgggtagggtttgggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 43523743 - 43523807
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  43523743 ctttttacattcgggtagggtttgggtatgagttcggggtggatacatatatccccgttacccgt 43523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 3564770 - 3564692
Alignment:
Q  374 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||| ||||||| |||||  |||||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  3564770 cgtgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaac-gggaaaacccgtcaaattggatttggt 3564692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 453
Target Start/End: Complemental strand, 6156017 - 6155873
Alignment:
Q  307 acattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    ||||| |||| || |||||||||| ||||| ||||||||| ||||| ||  ||||| |||   |||||||||||| |||||||||||||| || || ||     
T  6156017 acatttgtgacggttttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacat 6155920  T
Q  407 acccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||| ||||| |   |||||||||| || || ||||||||    
T  6155919 acccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggt 6155873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 417
Target Start/End: Complemental strand, 22695005 - 22694891
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| | ||| |||||||  |||| | ||||||| |||| | ||||||| |||| ||||    
T  22695005 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcgggg-aaacccata 22694907  T
Q  402 cccaaacccaaaccca 417  Q
    |||| |||||||||||    
T  22694906 cccatacccaaaccca 22694891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 10822608 - 10822536
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||| ||||| ||||||||| |||| ||||||||||||||   |||||||||||| ||||||| ||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaac 10822536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 473
Target Start/End: Original strand, 39422399 - 39422502
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 469  Q
    |||||||||||| |||||| | ||||| || || || | ||||||||||||||||| ||||||||| ||||| |||| | |||| || | || |||||||    
T  39422399 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggttacccac 39422498  T
Q  470 aggt 473  Q
    ||||    
T  39422499 aggt 39422502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 423
Target Start/End: Original strand, 6369705 - 6369801
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||| ||||| ||||||||| ||||| | |||||||| || | ||| ||| |||| ||||| |||||||||||||||||  ||||||| ||||||||    
T  6369705 gtatgggttcggggtgggtacatatatacacgttaccc-tcccatactcgtattttgaaatcagggaaaactcatacccatgcccaaactcaatcaaa 6369801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 20634186 - 20634279
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 414  Q
    |||||||||| ||||| |||| || | ||||||||  ||||||||||| || |||| ||||||||| |||||||||| | || || ||||||||    
T  20634186 tttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaac 20634279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 20650300 - 20650393
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 414  Q
    |||||||||| ||||| |||| || | ||||||||  ||||||||||| || |||| ||||||||| |||||||||| | || || ||||||||    
T  20650300 tttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaac 20650393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 28045641 - 28045761
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | ||  |||||||| || | ||| ||||| ||||    
T  28045641 tttttacatttgggacgggtatgggtatgggttcg-ggtgggtacctatatacccgttacccgtcccatattcgtgttttgaattagggaaaaacccata 28045739  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    |||| ||| |||| || |||||    
T  28045740 cccatacctaaacacagtcaaa 28045761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 6092622 - 6092559
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    |||||||||| | || || |||||||||| ||||| ||||||||| ||||| ||||||||||||    
T  6092622 tttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 2412762 - 2412681
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||||||||||| |||| ||| |||| ||| ||||| |||||||| ||||||||   ||||||| ||||||| ||| |||||    
T  2412762 tacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaatggggaaaatccgtcaaattgaatttg 2412681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 12457596 - 12457641
Alignment:
Q  408 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||||||||| |||||| |||||||| |||| ||||||    
T  12457596 cccaaacccaatcaaagcggggaaaccccgtcaaattgggtttggt 12457641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 85 - 467
Target Start/End: Original strand, 3773844 - 3774225
Alignment:
Q  85 gagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagga 184  Q
    |||| |||||||||| ||||||||| || ||| ||||  || ||| |||||||||||||||||||||||| | ||| |||||||||||   ||| |||||    
T  3773844 gagcacaatgttgtaatgcattatctagcaaagagataatgacaaacgatgactatggtgaaggagaagagagaggccgagagtgtgaggcatgaaagga 3773943  T
Q  185 gaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
    ||||||| | ||||||||||| |   |||||| |||||| |||||||||||| |||||||||  ||| ||||   |||||||||  || ||||||||||     
T  3773944 gaaaagatagaactatgataaatgggtgtcatatgaaagtctgaaactctgactgtgtgagtaaaatgattttgcgtttgggttcctaattatataaaag 3774043  T
Q  285 gggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaa 384  Q
    ||| |||||||||||  ||| || ||||| || || |||| ||||| ||||  ||||||||| ||||||| ||||||||||||||| ||| | || ||||    
T  3774044 gggtaataaattgat--tttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttacccgtctcgtgcccattttataaa 3774141  T
Q  385 atcggggaaaactcataccca-aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctaccc 467  Q
     | |||||||||||| ||||| ||||||||| || |||||||||| |||| || |||| || | |||||| || |||| |||||    
T  3774142 gttggggaaaactcaaacccataacccaaactcagtcaaagcaggaaaaatccatcaaattaggtttggttcgggtggttaccc 3774225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 84 - 441
Target Start/End: Original strand, 37217778 - 37218134
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    ||||| |||||||||| |||||||||||| ||  ||||| ||  |||||||| |||||||||   |||| | | ||| ||||||||||| ||||||||||    
T  37217778 cgagcacaatgttgtaatgcattatccagcaaggagatgatggtaatcgatggctatggtgataaagaaaagagaggccgagagtgtgagatatggaagg 37217877  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| |||||| |||||||||| || | |||||| ||||| || || ||||||||||||| |||  ||| ||||| |  ||| |||| |||||||| ||||    
T  37217878 agagaagagagaactatgatatgtgagtgtcatatgaaaaaccgagactctgattgtgttagtaaaatgatttaggcattgagtttctatttatacaaaa 37217977  T
Q  284 agggcaataaattgattctttttacattcgtgatgggttt-gggtatgagttcgaggtgggtacttatat-ccccgttacccgtctcgtacccgtgtttt 381  Q
      |  ||| |||||||  ||| || ||||  || |||||| ||||||||||||| | | ||||||||||| |||||||||||||| |||||| |||||||    
T  37217978 gagataat-aattgat--tttctatattcaggacgggtttggggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgtttt 37218074  T
Q  382 aaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
     |||| ||  |||||||| || || ||||||||||| ||||| | |||||||||| ||||    
T  37218075 gaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaa 37218134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 89 - 399
Target Start/End: Complemental strand, 11473025 - 11472720
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| || ||||||||  ||| ||||| || | |||||||||||||||||  ||||||| | |||| || ||||||| ||||||||||||| |    
T  11473025 gcaatgttgtaatgtattatccaacaaagagatgatgacgatcgatgactatggtgatagagaagagagaggtaga-agtgtgagatatggaaggagata 11472927  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    ||||| ||||||||||||| | |||||||| ||||||||| ||||| | |  ||||||  ||| ||||| ||||| ||||| ||||||||||||| |       
T  11472926 agagagaactatgataagtgagtgtcatctaaaagactgagactctaactacgtgagtgaaatgatttagggttttggtttctatttatataaaaggtat 11472827  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    ||||||||||   ||||  |||| | || || ||||||||||||||| ||||| |||| ||||| ||||||| || |||  ||||  |||||| ||||||    
T  11472826 aataaattga---ttttctcatttgggacggatttgggtatgagttc-aggtgagtacctatattcccgttatccatcttatacctctgttttgaaatcg 11472731  T
Q  389 gggaaaactca 399  Q
    || ||||||||    
T  11472730 ggaaaaactca 11472720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 35074460 - 35074611
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| | ||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  35074460 tttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccata 35074559  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||| | |||| ||||||    
T  35074560 cccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggt 35074611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 86 - 441
Target Start/End: Original strand, 4101317 - 4101671
Alignment:
Q  86 agcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggag 185  Q
    ||||||||||||||||||||||| ||| ||||||||| ||   ||||| ||||||||||| ||| |||| | ||||||||| ||||| |||| |||||||    
T  4101317 agcgcaatgttgtattgcattattcagcaaaaagatgatgatgatcgacgactatggtgatggaaaagagagaggtcgagattgtgatatatcgaaggag 4101416  T
Q  186 aaaagagaaaactatgataagtaattgtcatctgaaagactga-aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
    |||||| | |||||||| || ||| ||||| || |||||||||    | |||||||||||||  ||| ||| | |||||| |||| |||||| ||||||     
T  4101417 aaaagaaagaactatgacaaataagtgtcaactaaaagactgagggttttgattgtgtgagtgaaatgattaagggtttgagtttttatttaaataaaat 4101516  T
Q  285 gggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaa 384  Q
     || |||||||||||  |||  ||||||  || ||||| ||||||| ||||  | ||||||| |||||||| || |||| ||  ||||| ||||||| ||    
T  4101517 tggtaataaattgat--tttcaacattcaggacgggttagggtatgggttcaggatgggtacatatatccctgtaacccatcctgtacctgtgttttgaa 4101614  T
Q  385 atcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||  ||||||| || ||||  | ||||||| | ||||||| || ||||||| ||||    
T  4101615 atcatggaaaacccaaacccttatccaaacctagtcaaagcgggaaaaacccatcaa 4101671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 92 - 405
Target Start/End: Complemental strand, 19440322 - 19440010
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| |||||||||||| ||| ||||| || | ||| |||||||||||||   |||| | | ||| ||| | ||||| ||||| || || || |||    
T  19440322 atgttgtaatgcattatccagcaaatagatgatgacgatcaatgactatggtgattaagaaaagagaggccgataatgtgagatatgaaatgaaaataga 19440223  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaat 291  Q
    || |||  | |||| | | ||||||||| || ||||| ||||||| | |||||||  ||| |||||  |||||||||| ||||||||  ||| |||   |    
T  19440222 gagaaccgtaataaatgagtgtcatctggaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctatttataccaaaggggtggt 19440123  T
Q  292 aaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggg 391  Q
    ||||||||| |||||||||||| || ||||||||||||| |||||| |||||||| ||||||||| |||||| || |  ||||||||||| ||||| |||    
T  19440122 aaattgatt-tttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcaggg 19440024  T
Q  392 aaaactcataccca 405  Q
    |||||||| |||||    
T  19440023 aaaactcaaaccca 19440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 92 - 405
Target Start/End: Complemental strand, 23475575 - 23475263
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| ||||||||| || ||| ||||| || | ||| ||||||||||| |   |||| | | ||||||| | ||||| ||||| || || || ||     
T  23475575 atgttgtaatgcattatctagcaaatagatgatgacgatcaatgactatggttattaagaaaagagaggtcgataatgtgagatatgaaatgaaaatagt 23475476  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaat 291  Q
    || |||| | |||| | | |||||||||||| ||||  ||||||| | |||||||  ||| |||||  |||||||||| |||||||| |||| ||| | |    
T  23475475 gagaactgtaataaatgagtgtcatctgaaacactgggactctgactatgtgagtgaaatgatttagagtttgggtttttatttatacaaaacgggtagt 23475376  T
Q  292 aaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggg 391  Q
    ||||||||| |||||||||||| || ||||||||||||| |||||| |||||||| ||||||||| |||||| || |  ||||||||||| ||||||||     
T  23475375 aaattgatt-tttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcggga 23475277  T
Q  392 aaaactcataccca 405  Q
    ||||| || |||||    
T  23475276 aaaacccaaaccca 23475263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 10072456 - 10072607
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || | |||||||| ||||| ||||||||| ||||| ||||||||||||  | |||||||||||| |||||||||||||| ||||    
T  10072456 tttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccata 10072555  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  10072556 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 10072607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 16866159 - 16866310
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |||||||| |||| | |||||||||||| | |||||||||||| ||||    
T  16866159 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccata 16866258  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  16866259 cccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 16866310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 30650621 - 30650772
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || |||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | || ||||||||||||||    
T  30650621 tttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcata 30650720  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||| ||||||| ||||| | ||||||||||||||| |||| ||||||    
T  30650721 cccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 30650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 129 - 406
Target Start/End: Complemental strand, 43550689 - 43550416
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    ||||||| || |||||| |||||||| | ||| ||||| ||||| |||||||||||||||||| | || | |||||| ||| ||| |  |||||||||||    
T  43550689 atcgatggctgtggtgatggagaagatagaggccgagattgtgagatatggaaggagaaaagaaagaaatgtgataaataagtgttaattgaaagactga 43550590  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
     |||||||   | |||||  ||| ||||| ||||||||||| |||||||||| || ||| ||||||| ||  ||||  ||||||  || ||||||| |||    
T  43550589 gactctgacatt-tgagtgaaatgatttagggtttgggtttctatttatatagaaggggtaataaataga--ctttccacattcaggacgggtttgtgta 43550493  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    |||||||| |||| |||| ||||||||  ||||| |||||||| | ||||||||||| ||||||||||||| ||||||    
T  43550492 tgagttcg-ggtgagtacatatatccctattaccagtctcgtatctgtgttttaaaaacggggaaaactcaaacccaa 43550416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 18125331 - 18125180
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||| ||||| ||||    
T  18125331 tttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccata 18125232  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || || |||||||| ||||| | ||||||||||||||| |||||||||||    
T  18125231 ctcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 18125180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 405
Target Start/End: Complemental strand, 23533916 - 23533604
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| |||||||||||| ||| ||||| || ||||| ||||||||  |||   |||| | | ||| ||||| ||||| ||||| || || || |||    
T  23533916 atgttgtaatgcattatccagcaaatagatgatgacaatcaatgactattatgattaagaaaagagaggccgagaatgtgagatatgaaatgaaaataga 23533817  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaa- 290  Q
    || |||| | |||| | | |||||||||||| ||||| ||||||| | |||||||  ||| |||||  |||||||||| || ||||| |||| |||  |     
T  23533816 gagaactgtaataaatgagtgtcatctgaaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctaattatacaaaaggggttag 23533717  T
Q  291 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 390  Q
    |||||||||| |||||||||||| || | ||||||||||| |||||| |||||||| ||||| ||| |||||| || | ||||||| |||| ||||||||    
T  23533716 taaattgatt-tttttacattcgggacgagtttgggtatgggttcgaagtgggtacatatat-cccattacccatcgcatacccgtattttcaaatcggg 23533619  T
Q  391 gaaaactcataccca 405  Q
    |||||| || |||||    
T  23533618 gaaaacccaaaccca 23533604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 435
Target Start/End: Original strand, 3156936 - 3157206
Alignment:
Q  163 gagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtt 262  Q
    |||||||||| ||||||||||| |||||||| |||||| |||||| | |||||||| ||||||  | ||||||| |  | ||||  ||  ||||| | ||    
T  3156936 gagagtgtgacatatggaaggaaaaaagagagaactataataagtgagtgtcatctaaaagaccaagactctgactacgcgagtgaaaggatttaggatt 3157035  T
Q  263 tgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacc 362  Q
    ||||||| ||||||||||  | ||| ||||||||||||  || ||  || | || ||||||||||||  |||||  |||||||| ||||||||||||| |    
T  3157036 tgggtttctatttatatagtaggggtaataaattgatt--ttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatc 3157133  T
Q  363 cgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacc 435  Q
    |||| | ||||| | |||| ||||||||||||||  | ||||| ||||||||| | ||||||| |||||||||    
T  3157134 cgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaacc 3157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 17885455 - 17885606
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||| || || ||||| ||||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  17885455 tttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaacccata 17885554  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| |  |||||||| ||||| | ||||||||||||||| |||| ||||||    
T  17885555 cccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 17885606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 27063144 - 27063267
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| |||||  |||||||| |||| |||||| |||||||||| || || |||||||||||    
T  27063144 gggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaaaccca 27063243  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| ||||||||| |||||||    
T  27063244 gtcaaatcagggaaaatccgtcaa 27063267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 389
Target Start/End: Complemental strand, 6557962 - 6557741
Alignment:
Q  167 gtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttggg 266  Q
    |||||| || ||||||||||| ||||| ||||  || |||| | |||||||||||||||||| ||| |||||||||||||  ||| |||||  ||||| |    
T  6557962 gtgtgagatgtggaaggagaagagagagaacttagagaagtgagtgtcatctgaaagactgagactttgattgtgtgagtgaaatgatttagagtttgag 6557863  T
Q  267 tttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtc 366  Q
     || ||||| ||| ||||||  |||||| ||||| |||||| ||||| || || |||||||||| |||| ||| | || ||||||||  | |||| ||||    
T  6557862 attctatttctatgaaaaggataataaactgattttttttatattcgagacggatttgggtatgcgttc-aggagagttcttatatcttcattactcgtc 6557764  T
Q  367 tcgtacccgtgttttaaaatcgg 389  Q
    ||||||||||||||| |||||||    
T  6557763 tcgtacccgtgtttttaaatcgg 6557741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 313
Target Start/End: Original strand, 31345300 - 31345527
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    ||||||||||| |||| ||||||||  |  ||| ||||| || | |||||||||||||||||  ||||||| | | ||| | | ||||| |||||||||     
T  31345300 cgagcgcaatgatgtaatgcattatatatcaaagagatgatggcgatcgatgactatggtgattgagaagagagaagtcaaaaatgtgagatatggaaga 31345399  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| || |||||||||| | |||||||| || |||||| ||| |||||||||||||  ||| || ||  ||||| |||| |||||||||||||    
T  31345400 agaaaagagagaattatgataagtgagtgtcatctaaatgactgagactttgattgtgtgagtgaaatgatatagagtttgagtttctatttatataaaa 31345499  T
Q  284 agggcaataaattgattctttttacattcg 313  Q
    | || | |||||||||  ||||||||||||    
T  31345500 atggtagtaaattgat--tttttacattcg 31345527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 12980383 - 12980503
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||||||||| ||| ||||||||| | |||||||||||| ||||||||||||||  | ||||| |||||||||||    
T  12980383 gggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaaccca 12980482  T
Q  418 atcaaagcagggaaaacccgt 438  Q
     |||||   ||||||||||||    
T  12980483 gtcaaaatggggaaaacccgt 12980503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 458
Target Start/End: Complemental strand, 45885868 - 45885712
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || ||| |||||| ||||| ||||||||| ||||| |  |||||||||| | |||||||||||| | |||||||||||||||||    
T  45885868 tttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcata 45885769  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    |||| ||||||||||| ||||| | | |||||||||| || |||| |||||| ||||    
T  45885768 cccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcgag 45885712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 7779998 - 7780137
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||  ||||| ||||||||| ||||| ||| ||| ||||| | |||||||||||| | |||||||||||| ||||    
T  7779998 tttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccata 7780097  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| ||||| | ||||||| |||||||    
T  7780098 cccatacccaaacccagtcaaaacggggaaaatccgtcaa 7780137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 21702649 - 21702800
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||| ||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  21702649 tttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 21702748  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || ||||||||||| ||||| | || |||| ||||||| |||| ||||||    
T  21702749 ctcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggt 21702800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 39456117 - 39455967
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||||||| | ||||| |||||| |||||||||||||| ||||    
T  39456117 tttttacatttgggacgggtatgagtatg-gttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccata 39456019  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||| ||||||||||| ||||| | |||||||| |||||| |||| ||||||    
T  39456018 tccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggt 39455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 45380097 - 45380247
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || | |||| |||||| ||||| ||||||||| ||||| ||||||||||||| | ||||||| |||| |||||||| ||||| ||||    
T  45380097 tttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccata 45380196  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| ||||||||| ||||||| |||| ||||||    
T  45380197 cccatatccaaacccagtcaaaacagggaaaa-ccgtcaaattgggtttggt 45380247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 306 - 412
Target Start/End: Complemental strand, 27850425 - 27850319
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||| || ||||||||||||| ||||| | ||||||| ||||  ||||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  27850425 tacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 27850326  T
Q  406 aacccaa 412  Q
    |||||||    
T  27850325 aacccaa 27850319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 453
Target Start/End: Complemental strand, 18825962 - 18825818
Alignment:
Q  315 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca------aac 408  Q
    |||||||||||||| | ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| || |||||       ||    
T  18825962 gatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcac 18825863  T
Q  409 ccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  18825862 ccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 18825818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 22973394 - 22973499
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||| |||| |||||| ||||||| || ||||| |||||||||||    
T  22973394 gggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaaccca 22973493  T
Q  418 atcaaa 423  Q
     |||||    
T  22973494 gtcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 17851844 - 17851993
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | |||||||||||||||| ||||| | ||||||| |||||  |||||||||||| | ||||||||  |||| |||||||||||| ||||    
T  17851844 tttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtg--ttaagatcggggaaaacccata 17851941  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | | ||||| || |||| |||| ||||||    
T  17851942 cccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggt 17851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 27063322 - 27063445
Alignment:
Q  300 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||| |||||||| |  ||||| ||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||| || | ||||||||||||||  |    
T  27063322 tctttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccga 27063421  T
Q  400 tacccaaacccaaacccaatcaaa 423  Q
     ||||| ||||||||||| |||||    
T  27063422 gacccatacccaaacccagtcaaa 27063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 38139895 - 38139744
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||| |||| ||||| ||||||||||||||| | | ||||||||| | ||| |||||||| |||| ||||||||| ||||    
T  38139895 tttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccata 38139796  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| | ||||||| || |||| |||| ||||||    
T  38139795 cccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtttggt 38139744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 8906667 - 8906553
Alignment:
Q  327 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 426  Q
    |||| ||||| ||||||||| |||| ||||||||  |||||| ||| |||||||| ||||||| ||||||||| ||||| ||||||| |||||||||||     
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcg 8906568  T
Q  427 gggaaaacccgtcaa 441  Q
    | |||||||||||||    
T  8906567 gagaaaacccgtcaa 8906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 423
Target Start/End: Original strand, 31425997 - 31426119
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||| ||||||| |||| |||||||||||||| ||     
T  31425997 ctttctacattcgggtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaa 31426096  T
Q  401 acccaaacccaaacccaatcaaa 423  Q
    ||| | ||| ||||||| |||||    
T  31426097 accaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 18683980 - 18684077
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacc 415  Q
    ||||||||||||| ||||||||||| ||| |||||||| |||||||||| ||||||||| |||| |||||||||||||| |  ||||| |||||||||    
T  18683980 gggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaaacc 18684077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 91 - 411
Target Start/End: Original strand, 29292471 - 29292803
Alignment:
Q  91 aatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagt--gtgaaatatggaaggagaaa 188  Q
    ||||||||| |||||||||||  ||| ||||  ||   ||| |||| ||||||||  ||||| ||| ||| |||||||  |||| || || |||||||||    
T  29292471 aatgttgtaatgcattatccaacaaagagattatgatgatcaatgattatggtgattgagaataaagaggccgagagtacgtgagatttgaaaggagaaa 29292570  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagt---------tgaa-taatttaaggtttgggtttatatttata 278  Q
    | ||| | ||||||||||| |||||||||| |||||| || ||||||| | ||| |||         |||| ||||||| ||||||| ||| | ||||||    
T  29292571 aaagagagctatgataagtgattgtcatctaaaagaccgagactctgactatgttagtgaaatttagtgaaataatttagggtttggatttctctttata 29292670  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtggg--tacttatatccccgttacccgtctcgtacccgt 376  Q
    ||||| ||| | ||||||||||  || |||||||| || | |||| |||||| |||   ||||||  ||| |||||||  ||||||| ||||||||||||    
T  29292671 taaaaggggtagtaaattgatt--ttctacattcgagacgagtttaggtatgggtttagggtgggcgtacctatatccatgttacccatctcgtacccgt 29292768  T
Q  377 gttttaaaatcggggaaaactcatacccaaaccca 411  Q
    ||||| |||||||||||||  ||||||||||||||    
T  29292769 gttttgaaatcggggaaaatccatacccaaaccca 29292803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 446
Target Start/End: Complemental strand, 27896578 - 27896434
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||| ||||| || |||| |||||||||||||| ||| ||| | |||| |||||||||||||| | ||||| |||||| ||||  |||||||| || |    
T  27896578 tttttatattcgggacgggtatgggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaaa 27896479  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    |||| |||||||||||||||||||  | ||||||| |||| ||||    
T  27896478 cccatacccaaacccaatcaaagcgagaaaaacccatcaaattgg 27896434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 453
Target Start/End: Original strand, 43507458 - 43507586
Alignment:
Q  325 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaag 424  Q
    |||||| ||||  ||||||| | ||||| ||||||||||||||| ||||| |||||| |||||||||||||| |||||  | ||||||||||| |||||     
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaa 43507557  T
Q  425 cagggaaaacccgtcaacttggatttggt 453  Q
    | |||||||||| |||| |||| ||||||    
T  43507558 cggggaaaacccatcaaattgggtttggt 43507586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 3227049 - 3226898
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | |||| || || ||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| |||||||||||||| ||||    
T  3227049 tttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 3226950  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| || ||||| || | ||| |  |||||| ||||||| |||| ||||||    
T  3226949 cccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggt 3226898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 38152877 - 38153015
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||| |||||  |||||| ||||  | ||||| |||||| |||||||||||||| ||||    
T  38152877 tttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaacccata 38152976  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| ||||| | ||||||| |||||||    
T  38152977 cccatacccaaacccagtcaaaac-gggaaaatccgtcaa 38153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 39316985 - 39317124
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || | |||||||||||||  | ||| ||| ||||| |||| |||||||| | |||||||||||| |||||| ||||||||||||    
T  39316985 tttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcata 39317084  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    | || | ||||||||| ||||| | |||||||||||||||    
T  39317085 ctcatatccaaacccagtcaaaacggggaaaacccgtcaa 39317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 44658502 - 44658419
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |  |||||||||||||| |||||||||||    
T  44658502 tacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggt 44658419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 21750788 - 21750866
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||| |||| |||||||| |||||    
T  21750788 gggtttgggtatgagttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatcgggaaaaac 21750866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 41103670 - 41103755
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 411  Q
    ||||| ||||| ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||||||||| |||||||| |||||    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaacccatacccacaccca 41103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 417
Target Start/End: Complemental strand, 2630676 - 2630562
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||| |||||| || ||||||||||||| ||||| ||||||||  ||||| ||||| ||||||| | ||||| |||||| |||||||||||||| || |    
T  2630676 tttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaaa 2630578  T
Q  402 cccaaacccaaaccca 417  Q
    |||| |||||||||||    
T  2630577 cccatacccaaaccca 2630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 37182265 - 37182403
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| | || |||| ||||| |||| |||||||| | |||||||||||| || |||| |||||| ||||    
T  37182265 tttttacatttgggacgggtatgggtatgggttcg-gatgagtacctatatacccgctacccgtcccatacccgtgttttgaattcggagaaaacccata 37182363  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    | || ||||||||||| ||||| | |||||||||||||||    
T  37182364 ctcatacccaaacccagtcaaaacggggaaaacccgtcaa 37182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 42908106 - 42908023
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| ||||||||| ||||||||| ||||||||| |||| |||||||||||||| || || || |||||||||||||||||    
T  42908106 tgggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 25905637 - 25905762
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||| | |||| ||||||| | || ||||||||| |||||||| ||||||||||| |    
T  25905637 gtttgggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagt 25905735  T
Q  420 caaagcagggaaaacccgtcaacttgg 446  Q
    ||||   ||||||||| ||||| ||||    
T  25905736 caaaaaggggaaaacctgtcaaattgg 25905762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 32546198 - 32546275
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  32546198 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaa 32546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 45708952 - 45708859
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 411  Q
    |||||| |||||||||||| ||||||||| ||||| |||||||||||||   |||||||||||| | ||||| |||||| |||||| |||||||    
T  45708952 gggtttaggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcggagaaaacccataccaaaaccca 45708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 453
Target Start/End: Original strand, 5377094 - 5377226
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||| ||||||||| ||||| ||| ||||||||| | |||| ||||||| |||||||||||||| || || || || ||| |||||||    
T  5377094 tttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatc 5377193  T
Q  421 aaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||| | || |||| |||| || || ||||||||    
T  5377194 aaaacgggaaaaatccgttaaattagatttggt 5377226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 401
Target Start/End: Complemental strand, 25980001 - 25979921
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||||||| | ||||||||| |||||  |||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  25980001 tttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaaacccata 25979921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 44734436 - 44734311
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    ||||| ||||| ||||||||| ||||| ||| ||||| ||| | |||||||||||| |||||| | ||||| ||||| ||  |||||||||| |||||      
T  44734436 gtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaa-- 44734339  T
Q  426 agggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||||||| |||| ||||||    
T  44734338 agggaaaacccgtcaaattgggtttggt 44734311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 24753192 - 24753304
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 439  Q
    ||||||| ||||| ||||||||||||| | |||||||||||| | ||| |||||||| |||||||| | ||||||||| ||||| | | ||||| |||||    
T  24753192 tgggtacctatatacccgttacccgtcccatacccgtgttttgagatc-gggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtc 24753290  T
Q  440 aacttggatttggt 453  Q
    || ||| |||||||    
T  24753291 aaattgaatttggt 24753304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 405
Target Start/End: Original strand, 26622959 - 26623044
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||| || | |||||||||||| ||||| |||||||| || |||||    
T  26622959 gtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaaccca 26623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 43218289 - 43218394
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||||| |||| |||| |||||| |||||||||||| || |||  | || | |||| ||||||||| || ||||| |||||||||||    
T  43218289 gggtttgggtatgagttcggggtgagtacatatatcgccgttacccgtcccgcacctatattatgaaattggggaaaacccaaacccatacccaaaccca 43218388  T
Q  418 atcaaa 423  Q
     |||||    
T  43218389 gtcaaa 43218394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 25783004 - 25782916
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    |||||| || || ||| |||||||||||| ||||||||| ||||| ||| ||| ||||||| ||||||||||||| |||||| ||||||    
T  25783004 cattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataatcggagaaaac 25782916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 30839220 - 30839116
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 418  Q
    |||||||| ||||||||| ||| | ||| ||||||| |||||| |||| | ||||||| |||| ||||| ||||||||||| || || |||||||||||     
T  30839220 ggtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccag 30839121  T
Q  419 tcaaa 423  Q
    |||||    
T  30839120 tcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 37196044 - 37195973
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||| |||||||||||||  |||||||| ||||||||| ||||||| ||||||||| |||||||    
T  37196044 tacctgtgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaa 37195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 41741517 - 41741442
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaa 413  Q
    ||||||||| || || ||||||| ||||||| |||||||||||| |||||||||||||| ||||| || |||||||    
T  41741517 ggtgggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacccatactcatacccaaa 41741442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 28309498 - 28309572
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggga 392  Q
    ||||||||||||||||||| ||| | ||| ||||| ||||||||||||| ||||||||| |||| ||||| ||||    
T  28309498 gggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcaggga 28309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 3920547 - 3920631
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||||| ||||| ||||||||| ||||| || |||| ||||| | |||| ||||||| |||||||||||||| || |||||    
T  3920547 tttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaacccaaaccca 3920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 5022603 - 5022683
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    |||||| |||||| |||||||||||||||||||||||   ||||  |||| ||||||| |||| |||| ||||||||||||    
T  5022603 ggtttgagtatgaattcgaggtgggtacttatatccctactacctatctcatacccgtattttgaaattggggaaaactca 5022683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 441
Target Start/End: Original strand, 33841071 - 33841206
Alignment:
Q  305 ttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccc 404  Q
    ||||||| | || |||| || ||||| ||||| |||| |||| |||| ||  |||||||||| | |||||||||||| ||||||||||||||||| |  |    
T  33841071 ttacatttgggacgggtatgagtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattc 33841170  T
Q  405 aaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    | || |||| ||| ||||||| || ||||||||||||    
T  33841171 atactcaaa-ccagtcaaagcgggaaaaacccgtcaa 33841206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 429
Target Start/End: Original strand, 2472025 - 2472100
Alignment:
Q  354 cccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcaggg 429  Q
    |||||||||||||| |||||||| || | |||||||  |||||||| || || ||||||||||||||||| |||||    
T  2472025 cccgttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaatcaggg 2472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 5565410 - 5565271
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | |||| || |||||||| ||| | ||||||||| |||| ||||||||||| || | || ||||  ||| ||||| |||||||| || |    
T  5565410 tttttacatttgggatgtgtatgggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaaa 5565311  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    || | | ||||| ||| ||||||| ||||||| |||||||    
T  5565310 cctataaccaaatccagtcaaagcggggaaaatccgtcaa 5565271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 29015009 - 29014934
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    |||||||||| || ||||| ||||||||| |||| |||||||| |||||||| || || ||| |||||||||||||    
T  29015009 tatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaa 29014934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 10995921 - 10995843
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    |||| |||||||| ||||| ||||||||  |||| ||| |||||||||| | ||||||||| || ||||||||||||||    
T  10995921 gggtatgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaac 10995843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 423
Target Start/End: Complemental strand, 44845239 - 44845117
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||||| ||||| ||||| ||||||||  ||||||| | ||| ||||| ||||||||| || | |||||||||||||| ||     
T  44845239 ctttctacattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaa 44845140  T
Q  401 acccaaacccaaacccaatcaaa 423  Q
    ||||| ||| |||| || |||||    
T  44845139 acccataccaaaactcagtcaaa 44845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 16811720 - 16811812
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    |||||||||| | || || |||||||||| ||||| ||||||||  ||||| ||| ||| ||||||| |||||||||||| | |||||||||||    
T  16811720 tttttacatttgggacggctttgggtatgggttcg-ggtgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaa 16811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 24425406 - 24425474
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||| ||||| | ||||| ||| ||||||    
T  24425406 ggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaattcaaacccaa 24425474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 453
Target Start/End: Complemental strand, 37103231 - 37103079
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  |||||||| |||| ||||| | ||||| | ||||||| |||||||| || ||||||||| |||| ||||| || ||||| ||     
T  37103231 ctttctacattcgggtagggtttggatatgtgttcgggatgggtgcatatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaaacacaa 37103132  T
Q  401 acccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||  | | ||||||||||||||| | | ||| | ||||||| ||||| |||||    
T  37103131 acttatatccaaacccaatcaaatcggagaagatccgtcaaattggagttggt 37103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 8265656 - 8265711
Alignment:
Q  138 tatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagaga 193  Q
    |||||||| | |||||| | ||||||||||||||| ||||||||||||| ||||||    
T  8265656 tatggtgatgaagaagagagaggtcgagagtgtgacatatggaaggagataagaga 8265711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 44794130 - 44794052
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    |||||||||| | ||  |||||||||||| ||||| ||||||||| | ||| | ||||||||||||| ||||||||||||    
T  44794130 tttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgtttt 44794052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 44985952 - 44985870
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||| ||| |||| |||||| |||| ||| ||||||||||||||||| | | ||||| ||||||| || ||||||||    
T  44985952 tacccgtgtttgaaa-tcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggt 44985870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 10990941 - 10990871
Alignment:
Q  325 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||| |||  ||||| ||| ||||||||  ||||||||| ||||||||| |||| |||||||||||||    
T  10990941 ggtatgaattcagggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 23457156 - 23457214
Alignment:
Q  409 ccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctaccc 467  Q
    ||||||||| ||||||| ||||||||||||||| |||| |||||| |||| || |||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtaccc 23457214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 29157355 - 29157480
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttta--aaatcggggaaaactcatacccaaacccaaacc 415  Q
    ||||||||||| | |||   ||||| ||| ||||||||||||||||||||| ||||||| | |||  |||||||||||||  || | ||| |||||||||    
T  29157355 gggtttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaatccaaaaccatacccaaacc 29157454  T
Q  416 caatcaaagcagggaaaacccgtcaa 441  Q
    |  |||||   | |||||||||||||    
T  29157455 ctgtcaaattggtgaaaacccgtcaa 29157480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 16079021 - 16079097
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||  ||| | |||||| || ||||| ||||||||||||| | |||||||||||| | ||||| ||||||    
T  16079021 gtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaac 16079097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 29855556 - 29855468
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 390  Q
    |||||||||||| ||  ||||||| ||| |||| |  |||||||||||||| ||| ||||||||| | ||| |||| ||| ||||||||    
T  29855556 tttttacattcgggacaggtttggttatcagtttggtgtgggtacttatatgcccattacccgtcccatactcgtgctttgaaatcggg 29855468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 89 - 423
Target Start/End: Complemental strand, 35304831 - 35304499
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| |||||||||||||||| |||||||| | || ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||    
T  35304831 gcaatgttgtaatgcattatccagtaaagagatgttggcgattgatgactatggtgaaagagaagaaagaggccgagagtgtgagatatggaaggagaaa 35304732  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    | ||| ||||  ||||||| ||  ||| |||||||||||| |||| |  | |||| ||  ||| |||||  ||||| |||| | ||||||| |||||||     
T  35304731 aaagagaactgcgataagtgatcatcacctgaaagactgagactccggctctgtgggtgaaatgatttagagtttgagtttctttttatat-aaaagggt 35304633  T
Q  289 aataaattgattctttttacattc-gtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 387  Q
    |||||||||||  ||  |||||||  ||||| ||||||||||||||| | ||| ||||| ||||||||||||||||||| |||||   |||||||||||     
T  35304632 aataaattgat--ttcctacattctttgatgagtttgggtatgagtttggggtaggtacctatatccccgttacccgtcccgtacttatgttttaaaatt 35304535  T
Q  388 ggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
     | |||||| || ||||| | ||||| |||||||||    
T  35304534 agagaaaacccaaacccatatccaaatccaatcaaa 35304499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 89 - 453
Target Start/End: Complemental strand, 21957126 - 21956767
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| |||||||||||  ||| ||||  ||   |||||||||||||||||| ||||||| | |    || ||||||| |||||||||||||||    
T  21957126 gcaatgttgtaatgcattatccaacaaagagattatggtgatcgatgactatggtgaatgagaagagagact--gatagtgtgagatatggaaggagaaa 21957029  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    ||| | ||||||||||| | | |||||||| ||||||||| ||||||| |||| || |  ||| ||||| ||||||||||| ||||||||| |||||||     
T  21957028 agatataactatgataaatgagtgtcatctaaaagactgacactctgactgtgcgaatgaaatgatttagggtttgggtttttatttatat-aaaagggt 21956930  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    |||||||||||  ||| ||||||||| | | ||||||||||| ||||| |||||| || |||||||||||||| | |  |||||||||||||||||||||    
T  21956929 aataaattgat--tttctacattcgtaacgagtttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccgtgttttaaaatcg 21956832  T
Q  389 gggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |  ||||| || || || ||||||| ||||| |||   || |||||| ||||| || ||||||||    
T  21956831 gaaaaaacccaaactcatacccaaatccaattaaaatgggaaaaacctgtcaaatttgatttggt 21956767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 176 - 441
Target Start/End: Complemental strand, 8844032 - 8843770
Alignment:
Q  176 atggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatattt 275  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| || | ||| ||| |||||||||  ||| ||||| | |||  |||| |||||    
T  8844032 atggaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctattt 8843933  T
Q  276 atataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccg 375  Q
    |||| ||| ||| |||||||| |||  || |||||||  || ||||||||||||||||||| ||||||||  |||||||||| |||||||| || ||| |    
T  8843932 atatgaaaggggtaataaattaatt--ttctacattcacgacgggtttgggtatgagttcg-ggtgggtatctatatccccgctacccgtcccgcacctg 8843836  T
Q  376 tgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||||||| |||| ||| || || | ||||||||| |||||||| ||||||||||||||    
T  8843835 tgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8843770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 176 - 441
Target Start/End: Complemental strand, 8856996 - 8856734
Alignment:
Q  176 atggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatattt 275  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| || | ||| ||| |||||||||  ||| ||||| | |||  |||| |||||    
T  8856996 atggaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctattt 8856897  T
Q  276 atataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccg 375  Q
    |||| ||| ||| |||||||| |||  || |||||||  || ||||||||||||||||||| ||||||||  |||||||||| |||||||| || ||| |    
T  8856896 atatgaaaggggtaataaattaatt--ttctacattcacgacgggtttgggtatgagttcg-ggtgggtatctatatccccgctacccgtcccgcacctg 8856800  T
Q  376 tgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||||||| |||| ||| || || | ||||||||| |||||||| ||||||||||||||    
T  8856799 tgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8856734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 84 - 441
Target Start/End: Complemental strand, 12075951 - 12075597
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||| ||||||| |||||||||||  ||| ||||| || | ||| ||| ||||||||| |||||||| | ||  ||||||||||| |||| |||||    
T  12075951 cgagcgcattgttgtaatgcattatccaacaaagagatgatgacgatcaatggctatggtgatggagaagacagagaccgagagtgtgagatatagaagg 12075852  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| |||||| ||||||   |||||||| ||| ||||||||||| | |||||| ||  ||| ||| |  ||||  |||| |||||||||||||    
T  12075851 agaaaagagagaactataataagtggatgtcatctaaaaaactgaaactctaactgtgtgggtgaaatgattcagagttttagtttctatttatataaaa 12075752  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     ||| |||||||||||  ||| |||||||  || | ||||| ||| ||||| | ||||||||| ||| ||||  ||||| ||| |||||||||||||| |    
T  12075751 tgggtaataaattgat--tttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacctgtcacgtacccgtgttttga 12075654  T
Q  384 aatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||| ||  |||||||| || || |||||||||| |||||||| || ||||||||||||    
T  12075653 aattggaaaaaactcaaactcatacccaaacccgatcaaagc-ggaaaaacccgtcaa 12075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 84 - 401
Target Start/End: Original strand, 42907662 - 42907976
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||| ||||||||| |||||||| ||| ||| ||||  || | ||  | |||||||||||  ||||||||| ||| | ||||||||| ||||||||||    
T  42907662 cgagcgtaatgttgtaatgcattattcagcaaagagataatgacgattaacgactatggtgattgagaagaaagaggccaagagtgtgagatatggaagg 42907761  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||| | |||||||||||||   |||||||||||||||| | ||||| | ||| |||||  ||| ||||| |||||| |||| ||||||||| |||    
T  42907762 agaaaagatagaactatgataagtgtgtgtcatctgaaagactaagactctaactgtatgagtgaaatgatttagggtttgagtttctatttatat-aaa 42907860  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
    || | | |||||||||  ||| |||||||| || | ||||||||||| | ||| ||||||||| ||||||||| |||| |||| |||| ||||||||| |    
T  42907861 agagtagtaaattgat--tttctacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccattactcgtcccgtatccgtgttttga 42907958  T
Q  384 aatcggggaaaactcata 401  Q
    | |||| |||||||||||    
T  42907959 attcggagaaaactcata 42907976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 25265466 - 25265229
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||||||||| |||||||||||| ||| | |||||| | ||| ||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||    
T  25265466 cgagcgcaatgttgtaatgcattatccagcaaagaaatgttggcgatcaatgactatggtgaagaagaagaaagaggccgaaagtgtgagatatggaagg 25265367  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| ||||||||||||  | |||||||||||| | ||| |||||||||||||||||  ||| |||||   |||| |||| ||||||||| | |    
T  25265366 agaaaagagagaactatgataagcgactgtcatctgaaaaattgagactctgattgtgtgagtaaaatgatttagaatttgagtttctatttatat-aga 25265268  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttg 324  Q
    |||  |||||||||||  ||| |||||||| |||| |||||    
T  25265267 aggataataaattgat--tttctacattcgagatgagtttg 25265229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 85 - 387
Target Start/End: Original strand, 37926337 - 37926635
Alignment:
Q  85 gagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagga 184  Q
    ||||||||||||||| ||||||||| || ||| |||| ||| | || |||||||||| ||||| |||||||| ||||||||||||||| |||||||||||    
T  37926337 gagcgcaatgttgtaatgcattatctagcaaagagattttggcgattgatgactatgatgaagcagaagaaagaggtcgagagtgtgagatatggaagga 37926436  T
Q  185 gaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
    ||||| ||| ||||||||||||| | |||||||  ||||||||| ||| | | |||||||||| ||| |||||| ||||| ||||  ||| |||| |||     
T  37926437 gaaaatagagaactatgataagtgactgtcatc--aaagactgagactttaactgtgtgagttaaatgatttaaagtttgagtttcaattgatatgaaag 37926534  T
Q  285 gggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaa 384  Q
    ||  |||||||| ||  ||  |||||||  |||| ||||||||||| ||||     ||||||||||||||| |||||  |||| |||||| |||||||||    
T  37926535 ggataataaattaat--ttactacattcaggatgagtttgggtatgggttcagaccgggtacttatatccctgttacttgtctggtacccatgttttaaa 37926632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 85 - 436
Target Start/End: Original strand, 25940923 - 25941263
Alignment:
Q  85 gagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagga 184  Q
    ||||||||||||||| |||||||||||  ||| ||||| ||       ||||||| ||||| |||||||| | | | ||||||||| | || ||||||||    
T  25940923 gagcgcaatgttgtaatgcattatccaaaaaatagatgatg-------atgactacggtgatggagaagagagaagccgagagtgtaagatttggaagga 25941015  T
Q  185 gaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaa 284  Q
    ||||| ||||  ||||||||||| | |||||||||||||||| | ||| |||| ||||||||  | | ||||| |  |||||||| |||||||||||||     
T  25941016 gaaaatagaa--ctatgataagtgaatgtcatctgaaagactaagactatgatcgtgtgagtgaattgatttaggccttgggtttctatttatataaaag 25941113  T
Q  285 gggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaa 384  Q
    |||  |||||||||||  || ||||| || ||   ||||||||||| ||||| ||||||||| ||| | ||||||||| ||| |||||||||||||| ||    
T  25941114 gggttataaattgatt--ttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaa 25941211  T
Q  385 atcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaaccc 436  Q
    |||||| ||||| || || ||  |||||||| ||||||||  ||||||||||    
T  25941212 atcgggaaaaacccaaacacatgcccaaaccaaatcaaagtggggaaaaccc 25941263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 164 - 381
Target Start/End: Complemental strand, 33516313 - 33516097
Alignment:
Q  164 agagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattg-tgtgagttgaataatttaaggtt 262  Q
    ||||||||| |||| ||||||||||||||| || |||||||||| | |||||||||||||||  | ||||| |  | |||||||  ||| ||||| ||||    
T  33516313 agagtgtgatatatagaaggagaaaagagagaattatgataagtgagtgtcatctgaaagaccaagactctaacgggtgtgagtgaaatgatttagggtt 33516214  T
Q  263 tgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacc 362  Q
    || |||| ||||||||||||| ||| |||| |||||||  ||||||||| | || ||||||||||||  ||||| |||||||||||||||||| ||||||    
T  33516213 tgagtttttatttatataaaaggggtaatacattgatt--ttttacatttgagacgggtttgggtataggttcggggtgggtacttatatccctgttacc 33516116  T
Q  363 cgtctcgtacccgtgtttt 381  Q
    | |||||||||||||||||    
T  33516115 catctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 79 - 441
Target Start/End: Original strand, 36918894 - 36919253
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||||||||||||||| |||||||||||| ||||||||| || ||||||||||||  || ||||||||||| | ||| |||||||||||   |||    
T  36918894 agccccgagcgcaatgttgtaatgcattatccagcaaaaagatgatggcaatcgatgactgcggagaaggagaagagagaggccgagagtgtgacgcatg 36918993  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
     |||||||||| ||| || ||||| ||||   ||||||||||||| |||| ||||| | |||||||||  ||| |||||  ||||| |||| ||||||||    
T  36918994 taaggagaaaaaagagaaatatgacaagtggatgtcatctgaaagtctgagactct-actgtgtgagtgaaatgatttagagtttgagtttctatttata 36919092  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgt 378  Q
    |||||  || |||||| |||||  || ||||| ||  | | ||||||||||| |||   | ||| ||| ||||||| |||||| ||||   ||| | |||    
T  36919093 taaaagtggtaataaactgatt--ttctacatccggaacgagtttgggtatgggttaaggatggatacctatatccacgttactcgtcctatacacatgt 36919190  T
Q  379 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||| |||||||||||||| || || ||||||||||| | |||||  | ||||||||||||    
T  36919191 tttaaagtcggggaaaactcaaactcatacccaaacccagttaaagcgagaaaaacccgtcaa 36919253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 84 - 300
Target Start/End: Complemental strand, 33616435 - 33616219
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    ||||| |||||||||| ||||||||| || ||||||||  || ||||||||| ||||||| |  ||| ||| ||||| ||||||||||| ||||||| ||    
T  33616435 cgagcacaatgttgtaatgcattatcgagcaaaaagattatgacaatcgatggctatggttatagagtagagaaaggccgagagtgtgagatatggatgg 33616336  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    |||||||||| ||||||||||||| | |||||| ||||| | | | ||||||| |||||||||  ||| ||||| ||||| | ||| |||||||||||||    
T  33616335 agaaaagagagaactatgataagtgagtgtcatatgaaatattaagactctgactgtgtgagtgaaatgatttagggttttgatttttatttatataaaa 33616236  T
Q  284 agggcaataaattgatt 300  Q
     ||| ||||||||||||    
T  33616235 ggggtaataaattgatt 33616219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 86 - 395
Target Start/End: Original strand, 36306562 - 36306869
Alignment:
Q  86 agcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggag 185  Q
    |||||||||||||| |||||||||||| | |  |||| || | || |||||||||||||| |||||||| | ||| ||||||||| | ||| |||| |||    
T  36306562 agcgcaatgttgtaatgcattatccaggatagtgatgatggcgattgatgactatggtgatggagaagagagaggccgagagtgttagataaggaaagag 36306661  T
Q  186 aaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaag 285  Q
    | |||||  || ||||||||   | |||||||| ||||||||| ||||| ||||||| |||  ||| ||||| | ||| | ||| ||||||||||||| |    
T  36306662 ataagagttaaatatgataaccgagtgtcatctcaaagactgagactctaattgtgtaagtgaaatgatttatgatttcgatttctatttatataaaagg 36306761  T
Q  286 ggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaa 385  Q
    || |||||||||||  ||| |||||||| || ||||||| || |   |||| | | ||||| ||||||||||||| ||||||| |||||||||||| |||    
T  36306762 ggtaataaattgat--tttctacattcgggacgggtttgagtgtagcttcgggttaggtacctatatccccgttaaccgtctcatacccgtgttttgaaa 36306859  T
Q  386 tcggggaaaa 395  Q
    |||| |||||    
T  36306860 tcggagaaaa 36306869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 451
Target Start/End: Complemental strand, 6382376 - 6382227
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  6382376 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccata 6382277  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  6382276 cccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtttg 6382227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 11028064 - 11028215
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  |||||||||||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  11028064 tttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 11028163  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||| ||| ||||| | | ||||||||||||| |||| ||||||    
T  11028164 cccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtttggt 11028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 453
Target Start/End: Complemental strand, 15987350 - 15987215
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||  ||||| |||||||||| || | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15987350 gggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaaccca 15987251  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||   | ||||||||||||| |||| ||||||    
T  15987250 atcaaaatggagaaaacccgtcaaattgggtttggt 15987215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 441
Target Start/End: Original strand, 39085933 - 39086287
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| |||||||||||  ||| |||||  | | |||||| ||||| || |  || |||||| ||   ||||||||||  ||||||||||||||    
T  39085933 gcaatgttgtaatgcattatccaacaaagagatgacgacgatcgataactatagtaattgaaaagaaagagactgagagtgtgagctatggaaggagaaa 39086032  T
Q  189 agagaaaa---ctatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaag 285  Q
    | | ||||   ||||||||||||| |||||||||||| ||||| | ||||| |||||||||  ||| ||||| |||||  |||| ||||||||||||||     
T  39086033 aaaaaaaagaactatgataagtaagtgtcatctgaaaaactgagagtctgactgtgtgagtgaaatgatttagggtttaagtttctatttatataaaaa- 39086131  T
Q  286 ggcaataaattgattctttttacattcgtgat--gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
    || | |||||||||  ||| ||| || |||||  | ||||| ||||||||||   || ||||| ||||||||||||||||||  || |||| |||| | |    
T  39086132 ggtagtaaattgat--tttctacttttgtgatgagagtttgagtatgagttcactgtaggtacctatatccccgttacccgtaccgcacccatgttgtga 39086229  T
Q  384 aatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||| ||||||||| || || | ||||||||||||||| | | ||||| |||||||    
T  39086230 aatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaa 39086287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 44317526 - 44317675
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  44317526 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 44317625  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| |||| ||||    
T  44317626 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttg 44317675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 302 - 446
Target Start/End: Original strand, 7608961 - 7609105
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  7608961 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 7609060  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    |||| ||||||| ||| ||||| | ||||||||||||||| ||||    
T  7609061 cccatacccaaatccagtcaaaacggggaaaacccgtcaaattgg 7609105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 133 - 388
Target Start/End: Complemental strand, 21714246 - 21713993
Alignment:
Q  133 atgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaact 232  Q
    ||||||||||||| |||||||| ||||||||||| ||||| ||| | || ||||||||||| |||||||| |||| | |||||| ||| ||||||| |||    
T  21714246 atgactatggtgatggagaagagaaaggtcgagaatgtgagatacgaaaagagaaaagagagaactatgagaagtgagtgtcatttgagagactgagact 21714147  T
Q  233 ctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgag 332  Q
    || ||||||| |||  ||| ||||| |||||| |||| |||||||||||||  || |||||||| ||  ||| |||||| | || | |||| ||||||||    
T  21714146 ctaattgtgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaat--tttctacatttgagacgagtttaggtatgag 21714049  T
Q  333 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    ||   ||||||||| |||| | |  |||||| || ||||| | |||||||||||||    
T  21714048 tttagggtgggtacatatacctcgattacccatcacgtactcatgttttaaaatcg 21713993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 320
Target Start/End: Complemental strand, 17113327 - 17113089
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| ||||| |||||||||| |||||||| ||  ||| ||||  || | ||| |||||| | |||| |||||||| |  ||  |||||||||| |||||    
T  17113327 agccccgagcacaatgttgtaatgcattattcaacaaagagattatgacgatcaatgactgtagtgatggagaagagaggggctgagagtgtgagatatg 17113228  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    |||||| |||||||| ||||||||||||| | |||||||||||||||||| ||||||| | || ||||  ||| ||||||| ||||||||| ||||||||    
T  17113227 gaaggaaaaaagagataactatgataagtgagtgtcatctgaaagactgagactctgactttgggagtgaaatgatttaagatttgggtttttatttata 17113128  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatggg 320  Q
    |  |||| | |||||||||||  ||| |||||||| ||||||    
T  17113127 t-gaaagagtaataaattgat--tttctacattcgcgatggg 17113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 19534450 - 19534556
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||| | |||||   |||||||||||| |||||||||||||||    
T  19534450 tacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagattttaaaatcggagaaaactcataccca 19534549  T
Q  406 aacccaa 412  Q
    |||||||    
T  19534550 aacccaa 19534556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 31752447 - 31752596
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| |||||| || ||||| | |||||| |||||| |||||||||||| |||||||||||||| ||||    
T  31752447 tttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccata 31752546  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| | ||||||||||||||| | |  |||||||||||| |||||||||    
T  31752547 cccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatttg 31752596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 306 - 453
Target Start/End: Complemental strand, 19883156 - 19883009
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||| || | ||||| ||||  ||||| ||||| ||| |||||||||||||||| || |||| |||||||||||||||||||||||| || || ||    
T  19883156 tacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactca 19883057  T
Q  406 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     || |||||||||||||||| || |||||||||||| |||| ||||||    
T  19883056 tactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggt 19883009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 21423852 - 21424003
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||| | ||||||||| ||||| ||||||||||||||| |||||||||||  | || ||||||||| ||||    
T  21423852 tttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccata 21423951  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | || |||| ||||||| |||||||||||    
T  21423952 cccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggt 21424003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 55826727 - 55826576
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||| |||| ||||| ||||||||| ||||| ||||||||||||| | |||| ||||||  | |||||||||||| ||||    
T  55826727 tttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccata 55826628  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || | ||||||||| ||||| ||||||||| ||||||| |||||||||||    
T  55826627 ctcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggt 55826576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 452
Target Start/End: Original strand, 43893219 - 43893368
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||||||||| |||| ||||| ||| ||||| ||||||||||||| | |||||||||||  | ||||||| |||| ||||    
T  43893219 tttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgagatcgggg-aaacccata 43893317  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttgg 452  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||    
T  43893318 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgg 43893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 15733614 - 15733497
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| ||| ||||||| ||||||||| |||||| |||||||||||||||||||||| |||| |||||| |||||||||||| ||| ||||||||| |    
T  15733614 gggtttgagtacgagttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactcatatccatacccaaaccta 15733515  T
Q  418 atcaaagcagggaaaacc 435  Q
    || ||| | |||||||||    
T  15733514 ataaaatcggggaaaacc 15733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 393
Target Start/End: Original strand, 16574932 - 16575194
Alignment:
Q  130 tcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtca-tctgaaagactga 228  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||| | ||| || ||||||||||| || |||| ||||| | |  || || ||||||||||    
T  16574932 tcgatgactgtggtgaaggagaagaaagaggccgagagtgtgagagatgaaatgagaaaagagagaaatatggtaagtcactaacaatcagaaagactga 16575031  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
     || || |  ||| ||||  ||| ||||| | |||| |||| ||||||||| ||||||| |||||||| |||  |||||||||   || | |||||||||    
T  16575032 gaccctcaccgtgcgagtgaaatgatttatgatttgagtttctatttatattaaaagggtaataaattaatt--ttttacatttaagacgagtttgggta 16575129  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaa 393  Q
    |  |||||  |||||||||||||||| ||||| || || |||||||| |||||||||||| ||||    
T  16575130 taggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaa 16575194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 405
Target Start/End: Complemental strand, 25299147 - 25298834
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||| ||||| |||||||||||| |||||||   || | |||  |||||||||||| |||||||| | | ||||||| ||||| |||||||||||||||    
T  25299147 gcaattttgtaatgcattatccagcaaaaagactatgacgatcagtgactatggtgatggagaagagagaagtcgagattgtgagatatggaaggagaaa 25299048  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    |||||||| |||||||| ||| ||||| |||||||| ||  ||||| |   | |||||  ||| |||||  ||||| | || |||||||| |||| |||     
T  25299047 agagaaaattatgataaataagtgtcaactgaaagattgcgactctaacgttatgagtgaaatgatttagagtttgag-ttctatttataaaaaaggggt 25298949  T
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
     ||||||||||  |||  ||||| |  | ||||||||||||| ||||| |||||  |  ||||||||| |||||| || |||||||||||||| |||||     
T  25298948 gataaattgat--tttcaacatttggtacgggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccgtgttttgaaatcc 25298851  T
Q  389 gggaaaactcataccca 405  Q
    || ||||| || |||||    
T  25298850 ggaaaaacccaaaccca 25298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 47550457 - 47550336
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | |||||||||||||||||    
T  47550457 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcata 47550358  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    || | ||||||||||| |||||    
T  47550357 cctatacccaaacccagtcaaa 47550336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 193 - 399
Target Start/End: Complemental strand, 4741426 - 4741223
Alignment:
Q  193 aaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaata 292  Q
    |||||| ||| |||| | |||||||||| | | ||| ||| ||||||||||||  |||  ||||| |||||| |||| ||||||||||||| ||  ||||    
T  4741426 aaaactttgagaagtgagtgtcatctgagaaattgagactatgattgtgtgagaggaacgatttagggtttgagtttctatttatataaaatggataata 4741327  T
Q  293 aattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggga 392  Q
    ||||||||   | ||||||||  | ||||||  ||||| ||||| |||||||||||||||||| |||| ||||| | ||||| ||||||||||||| |||    
T  4741326 aattgatt---tatacattcggaacgggtttttgtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgagga 4741230  T
Q  393 aaactca 399  Q
    |||||||    
T  4741229 aaactca 4741223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 441
Target Start/End: Complemental strand, 6482123 - 6482000
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||| ||| |||| |||| | |||||||||||| |||| ||||||||| || ||||| |||||||||||    
T  6482123 gggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaaccca 6482024  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
    |||||| ||| ||||| |||||||    
T  6482023 atcaaaacagagaaaatccgtcaa 6482000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 10302075 - 10302214
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || || | |||||||| ||||| ||||||||| |||| |||||||||||||||| |||||||  ||| ||||||||||||||  | |    
T  10302075 tttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaa 10302174  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||||||||| | |||||||||| ||||    
T  10302175 cccatacccaaacccaatcaaaacggggaaaacccatcaa 10302214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 31918662 - 31918511
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||  ||||| ||| |||| |||| | |||||||||||  | |||||||||||| ||||    
T  31918662 tttttacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccata 31918563  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  31918562 ctcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 31918511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 411
Target Start/End: Complemental strand, 5902718 - 5902609
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  5902718 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 5902619  T
Q  402 cccaaaccca 411  Q
    ||||||||||    
T  5902618 cccaaaccca 5902609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 441
Target Start/End: Complemental strand, 12505722 - 12505505
Alignment:
Q  212 gtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacatt 311  Q
    ||||||||||||||||| ||| |||||||| || |  ||| |||||| ||||  |||| ||||||||||||| ||| |||||||||||   |||||| ||    
T  12505722 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgat--gttttacctt 12505625  T
Q  312 cgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccc- 410  Q
    |  || ||||||||||||||||||  |||||||||| |||||||| |           |||||||||||| |||||||||||||| || || || ||||     
T  12505624 caggacgggtttgggtatgagttcagggtgggtactaatatccccat-----------tacccgtgttttgaaatcggggaaaacccaaactcataccct 12505536  T
Q  411 aaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||||||| | |||||||||||||    
T  12505535 aaacccaatcaaagcggagaaaacccgtcaa 12505505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 30672953 - 30673091
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||||||||||  ||||||||||  ||| ||||||||| ||| ||||| ||||||||| |||||||||||| |||||  ||     
T  30672953 ctttctacattcgggtagggtttgggtataggttcgaggtg--tacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaa 30673050  T
Q  401 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    || || ||||||||||||||||| |||||||||||||||||    
T  30673051 actcatacccaaacccaatcaaatcagggaaaacccgtcaa 30673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 413
Target Start/End: Complemental strand, 9929405 - 9929160
Alignment:
Q  166 agtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgg 265  Q
    ||||||| | || ||| |||| |||||| ||||||||||||| ||||| |||| |||||| || ||||||| |||||||||  ||| |||||  ||||      
T  9929405 agtgtgagagattgaatgagataagagagaactatgataagtgattgttatctaaaagaccgagactctgactgtgtgagtgaaattatttagagtttca 9929306  T
Q  266 gtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 365  Q
    ||||||||||||||  ||  || |||||||||||  ||| ||| |||  || |  |||||||| ||||||| ||||||||| |||||||  |||||||||    
T  9929305 gtttatatttatatggaagaggtaataaattgat--tttctactttcaggacgattttgggtaagagttcggggtgggtacctatatccatgttacccgt 9929208  T
Q  366 ctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaa 413  Q
        ||||||| |||| ||||| || |||||||||||||| |||||||    
T  9929207 actatacccgtattttgaaatcaggaaaaactcatacccatacccaaa 9929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 423
Target Start/End: Complemental strand, 14606011 - 14605908
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| || |    
T  14606011 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagt 14605912  T
Q  420 caaa 423  Q
    ||||    
T  14605911 caaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 26564838 - 26564973
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||||||||||  |||| ||||||||| ||||| ||||||||||||| | |||||| ||||| |||||||||||| |||| || || |||||||||||    
T  26564838 gggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaaccca 26564937  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| |   ||||| ||||||| |||||||||||    
T  26564938 gtcaaaacgaagaaaatccgtcaaattggatttggt 26564973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 29527819 - 29527897
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  29527819 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaac 29527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 32585480 - 32585589
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||  ||||||||| ||||| ||||||||| ||| | |||||||||||| ||||||| ||||| |||||    
T  32585480 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaattcata 32585579  T
Q  402 cccaaaccca 411  Q
    ||||||||||    
T  32585580 cccaaaccca 32585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 441
Target Start/End: Complemental strand, 1866635 - 1866514
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||| ||||| ||||| ||| ||||||| | ||||||||||||||||||| |||| |||||||| ||||| ||||| || ||||| ||| | |    
T  1866635 gtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacccagacctagt 1866536  T
Q  420 caaagcagggaaaacccgtcaa 441  Q
    |||| | ||||||| |||||||    
T  1866535 caaatcggggaaaatccgtcaa 1866514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 7334458 - 7334309
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    ||||||| ||||||||| |||||| | | ||| ||||| ||||| |||||||||||||||||||| || |||||||| ||| ||||| || |||||||||    
T  7334458 atcgatggctatggtgatggagaaaagagaggccgagattgtgagatatggaaggagaaaagagagaattatgataaataaatgtcaactaaaagactga 7334359  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
     ||| | | |||||||||  ||| |||||  ||||| |||| ||||||||    
T  7334358 gactttaactgtgtgagtgaaatgatttagagtttgagtttctatttata 7334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 405
Target Start/End: Complemental strand, 10574525 - 10574420
Alignment:
Q  300 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||| |||||||| |  ||||||||||||||||||| || |||||| ||||||||||||||||||| |||||| || || | ||||||||||||| |||    
T  10574525 tctttctacattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattca 10574426  T
Q  400 taccca 405  Q
     |||||    
T  10574425 aaccca 10574420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 11122973 - 11122852
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | ||||| |||||| ||||    
T  11122973 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccata 11122874  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    |||| |||||||| || |||||    
T  11122873 cccatacccaaactcagtcaaa 11122852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 48459472 - 48459593
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||||||| |||||||| ||||| ||||||||| ||||| || |||||||||  | ||||| |||||| |||||||||||||| ||||    
T  48459472 tttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaacccata 48459571  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
     ||| || |||| |||||||||    
T  48459572 tccatactcaaatccaatcaaa 48459593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 32596270 - 32596194
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||||| |||||||| || ||||| ||||||||||||| | |||||||||||| ||||||||||||||    
T  32596270 gtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 32596194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 31782621 - 31782707
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| ||  ||||||||| |||| |||||||||||||| || |||||    
T  31782621 ggtttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaaccca 31782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 1724408 - 1724311
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||| || ||||||||||||| ||||| ||||||||| |||||  |||||||||||| | ||||| |||||| |||||||||||||| || |||||    
T  1724408 cattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaaaccca 1724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 4652682 - 4652743
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 379  Q
    |||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||    
T  4652682 gggtttgggtatgagttcaaagtgcgtacctatatccccgttacccgtctcgtacccgtgtt 4652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 47103745 - 47103850
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||| | ||||||||| |||| |||| ||||||||| || ||||| ||  |||||||    
T  47103745 gggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatacaaaaaccca 47103844  T
Q  418 atcaaa 423  Q
     |||||    
T  47103845 gtcaaa 47103850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30034531 - 30034647
Alignment:
Q  166 agtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgg 265  Q
    ||||||| |||||||||||||||||||||||||||||||||  | |||||  ||||||| ||  ||||| | | | |||||  ||| ||||| |||||||    
T  30034531 agtgtgagatatggaaggagaaaagagaaaactatgataagcgagtgtcacttgaaagattgtgactctcactttatgagtgaaatgatttagggtttgg 30034630  T
Q  266 gtttatatttatataaa 282  Q
    |||| ||||||||||||    
T  30034631 gtttctatttatataaa 30034647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 37349171 - 37349254
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| ||||||||||||||||| || || ||||||||||| ||||| | ||||||||| ||||| |||| ||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggt 37349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 45065256 - 45065379
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| | ||||||| |||||||| ||||| |||| ||||||||| |||| |||||| |||||||  | ||| | |||||||||||    
T  45065256 gggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaaccca 45065355  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     |||||   |||||||| ||||||    
T  45065356 gtcaaattggggaaaactcgtcaa 45065379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 352
Target Start/End: Complemental strand, 9281130 - 9280943
Alignment:
Q  163 gagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtt 262  Q
    |||||||||| ||||||||||||||||||||  |||||||||||| | ||| |||||||||| ||| ||||| ||| ||| | |  ||| ||||| ||||    
T  9281130 gagagtgtgagatatggaaggagaaaagagagtactatgataagtgaatgttatctgaaagattgagactctaattttgtcaatgtaatgatttagggtt 9281031  T
Q  263 tgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatat 352  Q
    ||  ||| ||| ||||||||| ||  |||||||| ||  ||| || ||||  ||   ||||| ||||||||||| ||||||||| |||||    
T  9281030 tgaatttctatctatataaaagggataataaatttat--tttctatattcaggacaagtttgagtatgagttcggggtgggtacctatat 9280943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 406
Target Start/End: Complemental strand, 23927956 - 23927641
Alignment:
Q  86 agcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggag 185  Q
    ||||||||||| || ||| |||||||  ||| ||||| || | || | |||||||||||| |||||| | | |    |||||||| | |||||||| |||    
T  23927956 agcgcaatgttataatgccttatccatcaaatagatgatgactattggtgactatggtgatggagaatatataatctgagagtgtaagatatggaatgag 23927857  T
Q  186 aaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaag 285  Q
    |||||||| || |||| ||||| ||||||||| |||| | ||| | ||| | |||||||||  ||| ||||| ||||||| ||  ||||||||  |||      
T  23927856 aaaagagagaattatgttaagtgattgtcatccgaaaaattgagattctaagtgtgtgagtgaaattatttatggtttggatt--tatttataataaaga 23927759  T
Q  286 ggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaa 385  Q
    || |||||||| ||  ||| || ||||| |||| ||||||||| | ||||| ||||| ||| |||||||  |||| |||||| ||||  ||||||| |||    
T  23927758 ggtaataaattaat--tttcta-attcgagatgagtttgggtaggggttcggggtggatacctatatccatgttaaccgtcttgtacttgtgttttgaaa 23927662  T
Q  386 tcggggaaaactcatacccaa 406  Q
    ||| | |||||||| ||||||    
T  23927661 tcgagcaaaactcaaacccaa 23927641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 40420890 - 40420753
Alignment:
Q  86 agcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggag 185  Q
    |||||||||||||| |||||||||||| |    ||||||  ||| ||||| |||||||||   |||||| | ||| | ||| ||||| ||||||||||||    
T  40420890 agcgcaatgttgtaatgcattatccagcat---gatgttagcaaccgatggctatggtgatatagaagagagaggccaagaatgtgagatatggaaggag 40420794  T
Q  186 aaaagagaaaactatgataagtaattgtcatctgaaagact 226  Q
    ||||||||||| |||||||||| | |||| | |||||||||    
T  40420793 aaaagagaaaagtatgataagtgagtgtcgtttgaaagact 40420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 441
Target Start/End: Original strand, 43309511 - 43309613
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 438  Q
    ||||| || |||| |||||||||||||| | |||||||||||| |||||||| ||||| || || || || |||||||| ||||||| | ||||||||||    
T  43309511 gtgggcacatataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgt 43309610  T
Q  439 caa 441  Q
    |||    
T  43309611 caa 43309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 21544586 - 21544663
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||| ||| ||||||||| |||| |||||||| ||||    
T  21544586 gggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaa 21544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 33615395 - 33615302
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaa 433  Q
    ||||||| ||||||||||||||||||| | |||| || || | |||||| |||||||| | ||||| |||||||||||||| ||||||| ||||    
T  33615395 tgggtacctatatccccgttacccgtcccatacctgttttattaaatcgaggaaaacttaaacccatacccaaacccaatctaagcaggtaaaa 33615302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 399
Target Start/End: Original strand, 33916148 - 33916245
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    |||||||||| | |||| |||||||||||||||   ||| ||||||||||||||  ||| |||||||||| ||||| ||| ||||| |||||||||||    
T  33916148 tttttacatttgggatgagtttgggtatgagttttgggtaggtacttatatccctattatccgtctcgtatccgtgatttgaaatccgggaaaactca 33916245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 47239489 - 47239368
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  ||| |||||||| ||||  |||||| || ||||| ||||||||||||| | ||||||||||||||||||||  ||||  ||||    
T  47239489 tttttacatttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatcggaaaaaatccata 47239390  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    |||| | ||||| |||||||||    
T  47239389 cccatatccaaatccaatcaaa 47239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 453
Target Start/End: Complemental strand, 19548985 - 19548891
Alignment:
Q  358 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||| |||||| ||||||| |||||||||||||| | || ||| ||||||||||| |||||| |||| ||| ||||||| |||| ||||||    
T  19548985 ttacccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaag-aggggaaaaccgtcaaattgggtttggt 19548891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 3505045 - 3505150
Alignment:
Q  87 gcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggaga 186  Q
    ||||||||||||| |||||||||||||||||||||| |  | ||||||||||||| |||  |||||| | |   || ||||||||| |||||||||||||    
T  3505045 gcgcaatgttgtaatgcattatccagtaaaaagatgattacgatcgatgactatgatgatcgagaaggagagactc-agagtgtgagatatggaaggaga 3505143  T
Q  187 aaagaga 193  Q
    | |||||    
T  3505144 agagaga 3505150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 50684474 - 50684552
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||||||||  | ||||||  |||||| |||||||||||| |||| |||| |||||||||||||| ||||    
T  50684474 gggtttgggtatgagttccggatgggtatctatatctccgttacccgtcccgtatccgtattttaaaatcggggtaaac 50684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 441
Target Start/End: Complemental strand, 7334254 - 7334162
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||| ||| ||||| |||||| ||||||| |||||||||||||  || | ||| ||||||||||| ||||||| || ||||||||||||    
T  7334254 tatatccccattatccgtcccgtacc-gtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaa 7334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 12825548 - 12825471
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    |||||||||||  ||||  ||||||||| |||||  |||||||||||| | |||||||||||| ||||||||||||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaac 12825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 37246840 - 37246929
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||| |||| |||||| ||||||||||||| || |||| ||||||   ||||   ||||||||||||||||||||||||| ||||||    
T  37246840 tacattcatgataggtttgtgtatgagttcgagatgagtacatatatctttgttattagtctcgtacccgtgttttaaaatcgaggaaaa 37246929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 41915062 - 41914969
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaa 433  Q
    ||||||| |||||||||||||||| || ||||||| | |||| |||||||||||||| || || || |||| |||||| ||||| | |||||||    
T  41915062 tgggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaa 41914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 4652531 - 4652673
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttg-tcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatat 177  Q
    |||| ||| |||||| ||||| |||||||||||| ||| ||||| || | ||| |||||||||||||||||  |||| | ||| ||||||||||| ||||    
T  4652531 agccccgaacgcaatattgtaatgcattatccagcaaagagatggtggtgaat-gatgactatggtgaaggc-aagagagaggccgagagtgtgagatat 4652628  T
Q  178 ggaaggagaaaagagaaaactatgataagtaattgtcatctgaaa 222  Q
    | |||||||||||||| ||  |||| || | | ||||||||||||    
T  4652629 gcaaggagaaaagagagaagaatgagaaatgaatgtcatctgaaa 4652673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 30266418 - 30266347
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||  |||||||| || | |||||||    
T  30266418 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgg 30266347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 30285770 - 30285841
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||  |||||||| || | |||||||    
T  30285770 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgg 30285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 3513970 - 3514024
Alignment:
Q  87 gcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatg 141  Q
    ||||||||||||| |||||||||||| ||||||||| | || |||||||||||||    
T  3513970 gcgcaatgttgtaatgcattatccagcaaaaagatgatttcgatcgatgactatg 3514024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 3505295 - 3505356
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    |||| |||| ||||||||||| |||||| |||||||| | ||||||||| ||||||||||||    
T  3505295 ggtgagtacctatatccccgtaacccgtttcgtacccatattttaaaattggggaaaactca 3505356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 39046943 - 39047092
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||| |  |||||||| ||||| ||||||||  ||| | |||||||||||  |||| ||||||||| ||||    
T  39046943 tttttacatttgggacgggtatgggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccata 39047042  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| || ||||  || ||||| | | |||||||| |||| |||| ||||    
T  39047043 cccatactcaaattcagtcaaaacggagaaaacccatcaaattgggtttg 39047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 441
Target Start/End: Original strand, 42299799 - 42299918
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||| ||||| ||||  ||||||||| ||||| ||||||||||||| | |||| ||||||| |||||||||||||  |||||||| ||| |||| || |    
T  42299799 gtttgagtatgggttcagggtgggtacctatatacccgttacccgtc-catacc-gtgttttgaaatcggggaaaatccatacccatacctaaactcagt 42299896  T
Q  420 caaagcagggaaaacccgtcaa 441  Q
    |||| | |  ||||||||||||    
T  42299897 caaaccggaaaaaacccgtcaa 42299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 24475124 - 24474972
Alignment:
Q  94 gttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagaga 193  Q
    |||||| |||||||||||  ||| || || || ||||||||| |||| | || |||||||| | ||  || |  ||||| || ||||||||||| |||||    
T  24475124 gttgtaatgcattatccaacaaagagttgatggcaatcgatggctatagcgatggagaagagagagaccggggatgtgagatgtggaaggagaagagaga 24475025  T
Q  194 aaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagt 246  Q
     ||||  || |||| | |||||||||||||||||| ||| ||||||| |||||    
T  24475024 gaacttagagaagtgagtgtcatctgaaagactgagactttgattgtatgagt 24474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 438
Target Start/End: Complemental strand, 31416019 - 31415899
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| || || ||||| ||||||||| |||||||| |||| || || ||||||||| |||| ||||||| |||||  || ||  | ||| |||||||    
T  31416019 gggtttgagtgtgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaaccca 31415920  T
Q  418 atcaaagcagggaaaacccgt 438  Q
     ||||| | ||||||||||||    
T  31415919 gtcaaatcggggaaaacccgt 31415899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 37107433 - 37107540
Alignment:
Q  333 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaa 432  Q
    |||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||  |||||||| || || || || |||||||| |||||   || |||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaat-tgggaaaacccaaactcatacacaaacccagtcaaaatgggaaaa 37107531  T
Q  433 acccgtcaa 441  Q
    |||||||||    
T  37107532 acccgtcaa 37107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 29035611 - 29035552
Alignment:
Q  327 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaat 386  Q
    |||||||||||||| ||||||||||||  | ||| ||||| |||||| ||||||||||||    
T  29035611 tatgagttcgaggttggtacttatatcttcattatccgtcccgtaccggtgttttaaaat 29035552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 29047744 - 29047685
Alignment:
Q  327 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaat 386  Q
    |||||||||||||| ||||||||||||  | ||| ||||| |||||| ||||||||||||    
T  29047744 tatgagttcgaggttggtacttatatcttcattatccgtcccgtaccggtgttttaaaat 29047685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 25265219 - 25265130
Alignment:
Q  351 atccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| |||||||  || ||||||| ||||||||||||||||||||| || | ||| |||||||| || ||||||| |  ||||||||||||    
T  25265219 atccacgttacctatcccgtacccatgttttaaaatcggggaaaaccca-agccatacccaaacgcagtcaaagcggaaaaaacccgtcaa 25265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 3516348 - 3516405
Alignment:
Q  342 ggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||| |||||| | ||||| ||| ||||||||||||||| ||||||| |||||||||    
T  3516348 ggtacctatatcactgttactcgtttcgtacccgtgttttgaaatcggagaaaactca 3516405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 425
Target Start/End: Original strand, 3737789 - 3737890
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| ||||| | ||||||| |||| || ||||||||||| | |||||||||||| |||| ||| ||||| |  ||||| ||| ||||| | |||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccctaacccacacctaaaccaagtcaaa 3737888  T
Q  424 gc 425  Q
    ||    
T  3737889 gc 3737890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 453
Target Start/End: Original strand, 39375315 - 39375420
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgga 447  Q
    ||||| |||||||||||||   ||||||| |||| |||||||||||||  || || || | |||||| || |||||  ||| |||||||||||| ||| |    
T  39375315 tatatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaaataggaaaaacccgtcaaattgaa 39375414  T
Q  448 tttggt 453  Q
    ||||||    
T  39375415 tttggt 39375420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 411
Target Start/End: Complemental strand, 40420730 - 40420580
Alignment:
Q  259 ggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgt 358  Q
    ||||| ||||| ||||||||||||| ||| |||||| ||||  ||| |||||||| | |||||||||||||  |||||  |||| ||  ||||||   ||    
T  40420730 ggttttggtttctatttatataaaaggggtaataaagtgat--tttctacattcggggtgggtttgggtataggttcggagtggctaggtatatctttgt 40420633  T
Q  359 tacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 411  Q
    ||| |||||| || || | |||| |||||  ||||||||||||| || |||||    
T  40420632 tactcgtctcatatccatattttgaaatcaaggaaaactcatactcataccca 40420580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 568425 - 568469
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttaccc 363  Q
    |||||||||||| ||||| ||||||||| ||||||||| ||||||    
T  568425 ggtttgggtatgggttcggggtgggtacatatatccccattaccc 568469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 7985174 - 7985078
Alignment:
Q  357 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||| | ||||| |||||| ||||||| |||||  || ||  | ||||||||||||||||| |  |||||||||||||| |||| ||||||    
T  7985174 gttatccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggt 7985078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 29527894 - 29527930
Alignment:
Q  405 aaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||||||||| |||||||| |||||||||||||||    
T  29527894 aaacccaaaccctatcaaagcggggaaaacccgtcaa 29527930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 7e-47; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 129 - 387
Target Start/End: Original strand, 30696739 - 30696995
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    |||||||||||| ||||||||||||| | |||| |||||||||| ||| |  ||||||||| ||| ||||||| ||||  | |||||| |||||||| ||    
T  30696739 atcgatgactattgtgaaggagaagagagaggttgagagtgtgagatacgagaggagaaaatagagaactatggtaagagaatgtcatatgaaagaccga 30696838  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
     ||||| | |||||||||   || ||||| ||||||  ||| ||||||||||||| ||| |||||||||||  |||||||||| | ||| ||||||||||    
T  30696839 gactctaactgtgtgagtgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgat--tttttacatttgggataggtttgggta 30696936  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 387  Q
    |||||||| ||||||||| |||||| | ||||||||||||||| || ||||||||||||    
T  30696937 tgagttcggggtgggtacatatatctctgttacccgtctcgtatccatgttttaaaatc 30696995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 88 - 396
Target Start/End: Original strand, 25210151 - 25210457
Alignment:
Q  88 cgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaa 187  Q
    |||||||||||| | ||||||| || |||  |||| |  |||||||| ||||||||| ||||||||| | ||  |||||||||||   ||| |||| |||    
T  25210151 cgcaatgttgtaatacattatctagcaaagggatgatcacaatcgataactatggtgtaggagaagagagagtccgagagtgtgagccatgaaaggtgaa 25210250  T
Q  188 aagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaaggg 287  Q
    |||||| ||||||||||||| | || ||||| |||  |||| |||| || |||||||||  ||| ||||| |||||| |||| ||||||||||||| |||    
T  25210251 aagagataactatgataagtgagtgccatctaaaattctgagactccgactgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggg 25210350  T
Q  288 caataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 387  Q
     || ||||||||  ||| |||||||| || |||||| |||||| ||| | ||||||||| ||||||| ||||||||||| | ||||||||||||||| ||    
T  25210351 taacaaattgat--tttctacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtc 25210448  T
Q  388 ggggaaaac 396  Q
    ||| |||||    
T  25210449 gggaaaaac 25210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 82 - 441
Target Start/End: Complemental strand, 35248702 - 35248349
Alignment:
Q  82 cacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaa 181  Q
    ||||||| |||| ||||| ||||||||| || ||| ||| | |||| |||||| |||||||||| |||||||| | ||| | | ||||||| ||||||||    
T  35248702 cacgagcacaattttgtaatgcattatctaggaaagagacgatgtcgatcgattactatggtgatggagaagagagaggccaaaagtgtgagatatggaa 35248603  T
Q  182 ggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataa 281  Q
    ||||| |||||| |||||| |||||  | |||||| ||||||||||| ||||||  |||||||||  ||| ||||| |||||   ||| ||||||||| |    
T  35248602 ggagataagagagaactataataagcgagtgtcatttgaaagactgagactctgtctgtgtgagtgaaatgatttagggtttcattttctatttatat-a 35248504  T
Q  282 aaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    ||||||  ||| |||     ||| |||||||  || ||||||||||||| ||||| ||||||||| | ||||||| ||||||||| | ||||||||||||    
T  35248503 aaaggggtatatatt-----tttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgtttt 35248409  T
Q  382 aaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
      ||||| ||||||| || ||||  |||||||| |||||||||   ||||||||| ||||    
T  35248408 gtaatcgtggaaaacccaaacccgtacccaaactcaatcaaagtgaggaaaacccatcaa 35248349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 88 - 446
Target Start/End: Complemental strand, 34214971 - 34214617
Alignment:
Q  88 cgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaa 187  Q
    |||||||||||| |||||||||||| ||| ||||| ||   ||| |||||||||||||   |||||| | ||| ||| ||||||| |||| |||||||||    
T  34214971 cgcaatgttgtaatgcattatccagcaaagagatgatgatgatctatgactatggtgattaagaagagagaggccgaaagtgtgagatatcgaaggagaa 34214872  T
Q  188 aagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaaggg 287  Q
    |||||  ||||||||||||| | |||||| ||||||||||| ||||||| ||||| |||  ||| |||| ||  ||| |||| |||||||||||| ||||    
T  34214871 aagagcgaactatgataagtgagtgtcatgtgaaagactgagactctgactgtgttagtgaaatgattt-agagttgagtttctatttatataaacaggg 34214773  T
Q  288 caataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 387  Q
    |||||||||||  |||| |||||    || ||||||| |||||||||||| |||||| |  ||||  ||| |||  ||| |||||||||||||| ||||     
T  34214772 caataaattga--ctttctacatctaggacgggtttgagtatgagttcgaagtgggtgccaatataaccgatacatgtcccgtacccgtgttttgaaatt 34214675  T
Q  388 ggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    | | |||||||| || || ||  ||||||||||||||| || |||| ||||||| ||||    
T  34214674 gagaaaaactcaaactcatacaaaaacccaatcaaagc-ggaaaaaaccgtcaaattgg 34214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 425
Target Start/End: Original strand, 13954512 - 13954854
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| ||||||||| |||||| |||||||||||| ||  ||||| || ||| |||||||||||||||||||||||| |  |||||| |||| ||   ||     
T  13954512 agccccgagcgcaaagttgtaatgcattatccagcaatgagatgatgacaaacgatgactatggtgaaggagaagaga--ggtcgacagtgcgaggcatt 13954609  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
     |||||||||||||| |||||| |||||| | ||||||||||||| |||| ||||| |  | ||||||  ||| ||||| |||| | |||| ||||||||    
T  13954610 aaaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttata 13954709  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtat-gagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 377  Q
    |||||  || ||||| |||||  ||| ||| |||| || ||||||| |||| | |||| | ||||| ||| ||||||  |||||| ||| |||| |||||    
T  13954710 taaaagtggtaataagttgat--tttctacgttcgagacgggtttgagtatggggttcaatgtgggcactaatatccttgttacctgtcccgta-ccgtg 13954806  T
Q  378 ttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||||||| ||| || || ||||||||||| |||||||    
T  13954807 ttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagc 13954854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 425
Target Start/End: Original strand, 14095719 - 14096061
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| ||||||||| |||||| |||||||||||| ||  ||||| || ||| |||||||||||||||||||||||| |  |||||| |||| ||   ||     
T  14095719 agccccgagcgcaaagttgtaatgcattatccagcaatgagatgatgacaaacgatgactatggtgaaggagaagaga--ggtcgacagtgcgaggcatt 14095816  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
     |||||||||||||| |||||| |||||| | ||||||||||||| |||| ||||| |  | ||||||  ||| ||||| |||| | |||| ||||||||    
T  14095817 aaaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttata 14095916  T
Q  279 taaaaagggcaataaattgattctttttacattcgtgatgggtttgggtat-gagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 377  Q
    |||||  || ||||| |||||  ||| ||| |||| || ||||||| |||| | |||| | ||||| ||| ||||||  |||||| ||| |||| |||||    
T  14095917 taaaagtggtaataagttgat--tttctacgttcgagacgggtttgagtatggggttcaatgtgggcactaatatccttgttacctgtcccgta-ccgtg 14096013  T
Q  378 ttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||||||| ||| || || ||||||||||| |||||||    
T  14096014 ttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagc 14096061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 79 - 364
Target Start/End: Complemental strand, 29657060 - 29656773
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||| || | ||||||||||||  ||| |||||||| | ||| ||||| ||||| |||||    
T  29657060 agccccgagcgcaatgttgtaatgcattatccaggaaagagatgatgacgatcgatgactataatgatggagaagagagaggccgagaatgtgagatatg 29656961  T
Q  179 gaaggagaaaagagaaaactatgat-aagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttat 277  Q
     ||||||| |||||| || |||||| |||| | |||||||||||||||||| ||| ||| |||||||||  ||| ||||| ||||  ||||| |||||||    
T  29656960 taaggagataagagagaattatgataaagtcagtgtcatctgaaagactgagactttgactgtgtgagtcaaatgatttagggttatggtttttatttat 29656861  T
Q  278 ataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtactt---atatccccgttacccg 364  Q
    |||||| ||  |||||||||||  ||| |||||| | ||  | |||| ||||||||||| |||||| || |   ||||||||||||||||    
T  29656860 ataaaagggataataaattgat--tttatacatttgagacagatttgtgtatgagttcggggtgggaacattgaatatccccgttacccg 29656773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 79 - 406
Target Start/End: Original strand, 35965099 - 35965424
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| ||||| |||||||||| |||||| ||||  | ||||||| ||   ||||||||||||| ||| |||||||| | | | ||||||||||| |||||    
T  35965099 agccccgagcacaatgttgtaatgcattgtccatgataaagatgatgaagatcgatgactatgatgatggagaagagagatgacgagagtgtgagatatg 35965198  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatattta-t 277  Q
    |||||||| || ||| ||||||||||||| | ||| |||||||| ||||| |  || | ||| |||||  ||| ||||| || ||   ||  |||||| |    
T  35965199 gaaggagataaaagagaactatgataagtgaatgttatctgaaaaactgagatcctcactgtatgagtgaaatgatttatggattcaattcctatttagt 35965298  T
Q  278 ataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 377  Q
    |||||| ||||||||||||||||  || |||||||| || ||||||||||||| |||||  |||||||| | ||||||| |||| | || | ||||||||    
T  35965299 ataaaaggggcaataaattgatt--ttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacatc-catacccgtg 35965395  T
Q  378 ttttaaaatcggggaaaactcatacccaa 406  Q
    |||| ||||||||||||||||| ||||||    
T  35965396 ttttgaaatcggggaaaactcaaacccaa 35965424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 24414235 - 24414084
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | ||||||||||||  |||    
T  24414235 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgata 24414136  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  24414135 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggt 24414084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 30846948 - 30847083
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| |||||||| |||||||||||    
T  30846948 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 30847047  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| | ||||||||||||||| |||| ||||||    
T  30847048 gtcaaaacggggaaaacccgtcaaattgggtttggt 30847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 395
Target Start/End: Complemental strand, 34544636 - 34544320
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtc-gagagtgtgaaatat 177  Q
    |||| |||||||||||||||| |||||||||||  ||| |||||  | | ||| |||||||||| || |||||| || |  | | |||||||||| ||||    
T  34544636 agccccgagcgcaatgttgtaatgcattatccaacaaagagatgacgacgatcaatgactatggcgatggagaaaaagagagactgagagtgtgagatat 34544537  T
Q  178 ggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttat 277  Q
    |||||||| ||||||| |||||||| |||| |||||||||| |||||  || | |||  |||||||| |  ||| ||||| |||||| |||| |||||||    
T  34544536 ggaaggagtaaagagagaactatgagaagtgattgtcatctaaaagaacgagagtctcgttgtgtgaatgaaattatttagggtttgagtttttatttat 34544437  T
Q  278 ataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 377  Q
    |||||| ||| ||||||| |||  ||| |||||||| || ||||||| |||||||||    |||||||  |||||| | ||||| | ||||||| |||||    
T  34544436 ataaaatgggtaataaatagat--tttctacattcgggaggggtttgagtatgagttttgtgtgggtatctatatctctgttacacatctcgtatccgtg 34544339  T
Q  378 -ttttaaaatcggggaaaa 395  Q
     |||| |||||||||||||    
T  34544338 tttttgaaatcggggaaaa 34544320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 423
Target Start/End: Complemental strand, 38342623 - 38342501
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||||||||||| ||||| ||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||     
T  38342623 ctttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaa 38342524  T
Q  401 acccaaacccaaacccaatcaaa 423  Q
    ||||| | |||||||||||||||    
T  38342523 acccatatccaaacccaatcaaa 38342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 37999469 - 37999578
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||| ||||    
T  37999469 tttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaacccata 37999568  T
Q  402 cccaaaccca 411  Q
    |||| |||||    
T  37999569 cccataccca 37999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 45115544 - 45115697
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactc--a 399  Q
    |||||||||| | |||||||||   |||| ||||| | ||||||| ||||| || |||||||||||| |||||||||||| |||||| |||||||||  |    
T  45115544 tttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcgaggaaaactcata 45115643  T
Q  400 tacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  45115644 tacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 45115697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 37106700 - 37106829
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| |||||  |||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| |||||||| |||||||| || |||||    
T  37106700 gggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaa 37106799  T
Q  424 gcagggaaaacccgtcaacttggatttggt 453  Q
     | ||||||||||||||| |||| ||||||    
T  37106800 acggggaaaacccgtcaaattgggtttggt 37106829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 43371555 - 43371660
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| | |||||||| ||    
T  43371555 gggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaaactca 43371654  T
Q  418 atcaaa 423  Q
     |||||    
T  43371655 gtcaaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 13705448 - 13705348
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||| |||||| ||||| ||||||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  13705448 gggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccataccca 13705349  T
Q  418 a 418  Q
    |    
T  13705348 a 13705348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 7314751 - 7314612
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| |||||| || ||||| ||||||||||||| | ||| ||| ||||||||||||||||||| ||||    
T  7314751 tttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccata 7314652  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| | ||||||||| ||||| | ||||||| |||||||    
T  7314651 cccatatccaaacccagtcaaaacggggaaaatccgtcaa 7314612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 13830722 - 13830872
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  |||||| ||||| ||||| ||||||||||||||| ||||||||| ||| | |||||||||||| | |||| ||||||| ||||    
T  13830722 tttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgttacc-gtcccatacccgtgttttgagatcgaggaaaacccata 13830820  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| |||||   ||||||||||||||| |||| ||||||    
T  13830821 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggt 13830872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 406
Target Start/End: Complemental strand, 17845538 - 17845390
Alignment:
Q  258 aggtttgg-gtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatcccc 356  Q
    |||||||| |||| ||||||||||||||||  |||||||||||| |||||||||||| || ||||||||||||| |||   |||||||||||||||  ||    
T  17845538 aggtttggagtttctatttatataaaaaggataataaattgatt-tttttacattcgagacgggtttgggtatgggttaagggtgggtacttatatgtcc 17845440  T
Q  357 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
     ||||| ||||| ||| |||||||| ||||||  ||||||||| ||||||    
T  17845439 attaccggtctcatactcgtgttttgaaatcgaagaaaactcaaacccaa 17845390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 37472840 - 37472723
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||| |||||| |||||||| || || ||||||||||||| | |||||||||||| |||||||||||||  ||||| || ||||||||||| |||||    
T  37472840 gggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaa 37472741  T
Q  424 gcagggaaaacccgtcaa 441  Q
     | |||||||||||||||    
T  37472740 acggggaaaacccgtcaa 37472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 45256809 - 45256930
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||||||||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||    
T  45256809 tttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactcata 45256908  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    | || | ||| ||||| |||||    
T  45256909 ctcatatccacacccagtcaaa 45256930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 9632372 - 9632511
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||| ||| ||||| ||| ||||||||| | |||||||||||  | |||||||||||| ||||    
T  9632372 tttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccata 9632471  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| || |||||||| ||||| | || ||||||||||||    
T  9632472 cccatactcaaacccattcaaaacgggaaaaacccgtcaa 9632511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Complemental strand, 36128209 - 36128070
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| |||| |||| ||||| |||||||||| || | |||||||||||  | |||||||||| | ||||    
T  36128209 tttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacata 36128110  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| ||||| | ||||||| |||||||    
T  36128109 cccatacccaaacccagtcaaaacggggaaaatccgtcaa 36128070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 453
Target Start/End: Complemental strand, 44746196 - 44746061
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| ||||||||| || |||||||| ||||| ||| ||||||||| | ||  |||||||| |||||||||||||| || | ||| |||||||| ||    
T  44746196 gggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactca 44746097  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||| | ||||||||||||||| |||| ||||||    
T  44746096 atcaaaacggggaaaacccgtcaaattgggtttggt 44746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 4961699 - 4961612
Alignment:
Q  106 tatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagaga 193  Q
    ||||||| ||| ||||| || ||||||||||||||||||| |||||||| | || |||||||||||| ||||||||||||||||||||    
T  4961699 tatccagcaaagagatgatgacaatcgatgactatggtgatggagaagagagagatcgagagtgtgagatatggaaggagaaaagaga 4961612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 35409417 - 35409274
Alignment:
Q  138 tatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgat 237  Q
    |||||||| |||||||| | ||| ||||||||||| ||||||| | ||||||||   ||||||||||||| | |||||| || |||||||| |||||||     
T  35409417 tatggtgatggagaagagagaggccgagagtgtgagatatggacgaagaaaagaatgaactatgataagtgagtgtcatatgtaagactgagactctgac 35409318  T
Q  238 tgtgtgagttgaataatttaaggtttgggtttatatttatataa 281  Q
    ||||| |||  |||| ||||  |||||||||| |||||||||||    
T  35409317 tgtgtaagtgaaatagtttagagtttgggtttttatttatataa 35409274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 435
Target Start/End: Complemental strand, 10208533 - 10208400
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  |||||| ||||| ||||| ||| ||||| |||||  || ||||||||| | |||||||||||||| || ||||||||| ||||    
T  10208533 tttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaacccata 10208434  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacc 435  Q
    |||| ||||||||||| ||||| | |||||||||    
T  10208433 cccatacccaaacccagtcaaaacggggaaaacc 10208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 409
Target Start/End: Original strand, 14331529 - 14331620
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacc 409  Q
    ||||||||||||| |||||  |||||||| ||||||||||||||||||| | |||| || |||| |||| ||||||||| ||||||||||||    
T  14331529 gggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaacccatacccaaacc 14331620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 22900796 - 22900919
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||| |||||||||||||| ||||||||  |||| ||||||||| |||| | |||||||||||| |||||||| ||||| || ||||| ||||| ||| |    
T  22900796 gggtatgggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaa 22900895  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||||   ||||||||||||||    
T  22900896 gtcaaagtgaggaaaacccgtcaa 22900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 453
Target Start/End: Complemental strand, 40734823 - 40734536
Alignment:
Q  163 gagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtt 262  Q
    |||||||||| ||||| ||||||| || | ||||||||||||  | |   |||| ||||||||||| ||||||| |||||||||  ||| ||||| ||||    
T  40734823 gagagtgtgagatatgtaaggagacaaaataaaactatgatatatgagaatcatttgaaagactgagactctgactgtgtgagtgaaatgatttagggtt 40734724  T
Q  263 tgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacc 362  Q
    | ||||| ||||||||| || |||  | |||||| |||  || | |||||  |   ||||| | |||||||||| | ||| | | |||||| | ||||||    
T  40734723 ttggtttttatttatattaagaggt-agtaaattaatt--ttctgcattcaaggcaggtttagatatgagttcgggatggattcatatatctctgttacc 40734627  T
Q  363 cgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||| ||||||||||| |||||||  |||||| || |  || ||||||||| ||||||||| |  |||||||||||| ||| |||||||    
T  40734626 cgtctcatacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaaccaaatcaaagcggataaaacccgtcaaattgaatttggt 40734536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 452
Target Start/End: Complemental strand, 12193930 - 12193780
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| ||| ||||  |||||||||||||  ||||| ||| ||||||||| | |||||||||| | |||||||| ||||| ||||    
T  12193930 tttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgggaaaaacacata 12193831  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttgg 452  Q
    | || ||||||||||| |||||   || |||||||||||| |||| |||||    
T  12193830 ctcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggtttgg 12193780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 91 - 283
Target Start/End: Complemental strand, 31601078 - 31600888
Alignment:
Q  91 aatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaag 190  Q
    ||||||||| |||||||||||  ||| ||||| || | ||| |||||||||||||  ||||||| |  || | | ||||||| ||||||||||| | |||    
T  31601078 aatgttgtaatgcattatccaacaaagagatgatgacgatcaatgactatggtgattgagaagaga--ggccaatagtgtgagatatggaaggatagaag 31600981  T
Q  191 agaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    ||| ||||||||||||| |  ||||| ||||||||| | ||||| | ||| |||||  ||| |||||  ||||| |||| |||||||||||||    
T  31600980 agagaactatgataagtgagcgtcatatgaaagactaagactctaactgtatgagtgaaatgatttagagtttgagtttctatttatataaaa 31600888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 6027968 - 6027888
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    ||||| ||||| ||||||||| ||||| || |||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaacccaa 6027888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 12341654 - 12341737
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||| |||||||||||||| |||||||| |||||||| || ||||| | ||||||||||||||| |||| ||||||    
T  12341654 tacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggt 12341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 15546730 - 15546869
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||  ||||||||  |||| ||  |||||||||| | |||||||||||| |||||||||||||| || |    
T  15546730 tttttacatttgggaagggtatgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaa 15546829  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||  |||| | ||| ||||||| |||||||| ||||||    
T  15546830 cccatgcccagatccagtcaaagcggggaaaactcgtcaa 15546869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 31942272 - 31942149
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg-ttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| |||| ||| | ||||||||||||||| || |||||||||||| |||||||| |||| |||||| ||| ||| || ||||| | |||||||||    
T  31942272 ggtttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaaccca 31942173  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||||| || ||||||| ||||    
T  31942172 gtcaaagcgggaaaaacccatcaa 31942149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 42798091 - 42798012
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 381  Q
    |||||||||| | ||  |||||| ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  42798091 tttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgtttt 42798012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 11958912 - 11959071
Alignment:
Q  211 tgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacat 310  Q
    ||||||||||||||| || ||||| | ||||| |||| ||| || || | |||| |||| |  ||||||||||  || ||||||||||||  || |||||    
T  11958912 tgtcatctgaaagaccgagactctaactgtgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgatt--ttatacat 11959009  T
Q  311 tcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtac 372  Q
    || ||||| ||||||||||||||||| ||   |||| ||||||| ||||||||||| |||||    
T  11959010 tcatgatgagtttgggtatgagttcggggcatgtacatatatcctcgttacccgtcccgtac 11959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 451
Target Start/End: Complemental strand, 8916040 - 8915892
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | ||| | |||||| ||||    
T  8916040 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatc-gagaaaacccata 8915942  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    |||| | |||||| || ||||| | || |||| ||||||| ||| |||||    
T  8915941 cccatatccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttg 8915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 396
Target Start/End: Original strand, 40359291 - 40359424
Alignment:
Q  261 tttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgtta 360  Q
    |||| |||| |||||||||||||   | |||||||||||  |||||||||| | ||  |||||| |||| |||||||| ||||||| |||||||| ||||    
T  40359291 tttgagtttctatttatataaaagatgtaataaattgat--tttttacatttgagagaggtttgagtattagttcgagatgggtacctatatccctgtta 40359388  T
Q  361 cccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
     || |||| |||| ||||| |||||||||| |||||    
T  40359389 tccatctcataccggtgttctaaaatcgggaaaaac 40359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 3547168 - 3547239
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    |||||||| |||| ||||| ||||||||| |||||| |||||||||||| ||||||||| |||| |||||||    
T  3547168 gggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 419
Target Start/End: Complemental strand, 24051705 - 24051610
Alignment:
Q  324 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||| ||||| ||| ||||| |||||||| |||||||||| | ||| ||| |||||||||||| |||| | || ||||| |||||||||||||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaaacccaat 24051610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 18485651 - 18485737
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||||||| ||||  ||||||||| ||||||||||||||||||   |||||||| ||||||||||| ||| ||| || |||||    
T  18485651 ggtttgggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatcgaggataacccaaaccca 18485737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 6164553 - 6164473
Alignment:
Q  325 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||||||   |||| |||| ||||||||| || |||||    
T  6164553 ggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaacccaaaccca 6164473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 14540804 - 14540863
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactc 398  Q
    |||||| | ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  14540804 gtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactc 14540863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 18106154 - 18106083
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||||||||| | |||||||||||| |||||||| | ||||||||| ||||| | ||||||| |||||||    
T  18106154 tacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaa 18106083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 395
Target Start/End: Original strand, 44057867 - 44057962
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttc-gaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    |||| |||||||| |  ||||||||||||| |||| | ||||||||| ||||||||| ||||||||| |||||| || |||| ||||| |||||||    
T  44057867 ctttctacattcgggtagggtttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttgaaatcagggaaaa 44057962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 405
Target Start/End: Original strand, 4427909 - 4428013
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 400  Q
    |||| |||||||| |  ||||||||||||| ||||||||||| | | |||||| ||||| |||||| | ||||||| || | || ||||||||||| ||     
T  4427909 ctttctacattcgggtagggtttgggtatgggttcgaggtggatccatatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaa 4428008  T
Q  401 accca 405  Q
    |||||    
T  4428009 accca 4428013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 6027901 - 6027853
Alignment:
Q  405 aaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  6027901 aaacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggt 6027853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 441
Target Start/End: Original strand, 10212443 - 10212531
Alignment:
Q  353 ccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||||||| ||| |||| ||||||||  |||||||||||||| || || || ||| ||||||| ||||| |||| ||||| ||||||    
T  10212443 ccccgttacctgtcccgtaaccgtgtttggaaatcggggaaaacccaaactcataccaaaacccagtcaaaacaggaaaaactcgtcaa 10212531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 13531817 - 13531935
Alignment:
Q  181 aggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatata 280  Q
    ||||||| | ||| |||| ||| |||| | |||||||||| ||||| ||  | |||||||||||||  ||| ||||| |||||| |||| ||||||||||    
T  13531817 aggagaataaagagaactctgagaagtgagtgtcatctgagagact-aagttttgattgtgtgagtgaaatgatttagggtttgagtttctatttatata 13531915  T
Q  281 aaaagggcaataaattgatt 300  Q
    ||| ||  ||||||||||||    
T  13531916 aaatggataataaattgatt 13531935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 34320653 - 34320708
Alignment:
Q  344 tacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    |||||||||||||||||  | |||| |||| |||||||||||||| ||||||||||    
T  34320653 tacttatatccccgttagtcatctcatacctgtgttttaaaatcgaggaaaactca 34320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 4961536 - 4961479
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 377  Q
    ||||||||||| |||||||||| |||| |||||||| ||||| |||| | ||||||||    
T  4961536 gtttgggtatgggttcgaggtgtgtacctatatccctgttacacgtcccatacccgtg 4961479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 441
Target Start/End: Original strand, 26755764 - 26755865
Alignment:
Q  340 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 439  Q
    ||||||| |||||||||||||  ||||   ||||| | |||||||||||  |||||| || || || ||||||||||| ||||| | || ||||||||||    
T  26755764 tgggtacatatatccccgttaatcgtccgatacccatattttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtc 26755863  T
Q  440 aa 441  Q
    ||    
T  26755864 aa 26755865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 33175252 - 33175309
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    |||||||| ||||| | || |||||| | |||||||||||||||||||||| ||||||    
T  33175252 gtgggtacctatatacacgctacccgacccgtacccgtgttttaaaatcggagaaaac 33175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 407
Target Start/End: Complemental strand, 34346338 - 34346003
Alignment:
Q  79 agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatg 178  Q
    |||| |||||||| | || || || ||||||||| ||| |||||||| | |||||||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  34346338 agcctcgagcgcatttttataatgaattatccagcaaagagatgttggcgatcgatgactatggtgaaggagaagaaagaggccgagaatgtgagatatg 34346239  T
Q  179 gaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttata 278  Q
    |||| |||||||| | ||||||||||||| | | |||||| ||||||||| ||||||| |||||||||  ||| ||||| ||||||||||| ||||||||    
T  34346238 gaagaagaaaagatagaactatgataagtgactctcatctaaaagactgagactctgactgtgtgagtgaaatgatttagggtttgggtttctatttata 34346139  T
Q  279 ta--------aaaagg-gcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcg 369  Q
    ||        |||||| | |||||||| ||  ||| ||||||||  | || |||||||||   |||| ||||||||| |||||||||||||| ||   ||    
T  34346138 taatttatataaaaggagtaataaattaat--tttctacattcggaacggatttgggtatagattcggggtgggtacctatatccccgttactcgctccg 34346041  T
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaa 407  Q
     |||||| ||||||||||||| ||||| ||||| ||||    
T  34346040 aacccgtattttaaaatcgggaaaaacccatactcaaa 34346003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 166 - 395
Target Start/End: Original strand, 20348916 - 20349142
Alignment:
Q  166 agtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgg 265  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| |  | |||||||  ||||||||  | | ||||| ||||||     
T  20348916 agtgtgagatatggaaggagaaaagagagaactatgataagtaagtgtcatctgaaagtccaagactctga--gtgtgagtgaagtgatttagggtttga 20349013  T
Q  266 gtttatattt-atataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccg 364  Q
    |||||||||| |||||||||| | |||||||| |||  ||||||||| |  | || |||||||||||||||| ||||||||| |||||||||||||| ||    
T  20349014 gtttatattttatataaaaagtgtaataaattaatt--ttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcg 20349111  T
Q  365 tctcgtacccgtgttttaaaatcggggaaaa 395  Q
    || | |||||||||||| |||||||||||||    
T  20349112 tcccatacccgtgttttgaaatcggggaaaa 20349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 5863486 - 5863335
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||||||||||||  ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  5863486 tttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 5863387  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  5863386 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 5863335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 396
Target Start/End: Original strand, 9402413 - 9402667
Alignment:
Q  139 atggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgatt 238  Q
    ||||||| |||||||| | ||| ||| | ||||| |||||||||||||||||||| ||||||||||||| | ||| || ||||||||  | ||||||| |    
T  9402413 atggtgatggagaagagagaggccgaaaatgtgagatatggaaggagaaaagagagaactatgataagtgagtgtgatatgaaagacctagactctgact 9402512  T
Q  239 gtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgag 338  Q
    ||||||||  ||| ||||| ||||||||||| ||||||||||||  ||| | |||||||||  ||| |||||||| ||  |||||| ||||| ||||| |    
T  9402513 gtgtgagtgaaatgatttagggtttgggtttctatttatataaatggggtactaaattgat--tttctacattcgagacaggtttgagtatgggttcg-g 9402609  T
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||  || |||||||  ||||||||||  |||||| |||||| ||||||||||||||    
T  9402610 gtggacacctatatccatgttacccgtcctgtacccatgttttgaaatcggggaaaac 9402667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 27534669 - 27534808
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||||||||  |||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  27534669 tttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 27534768  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||||||||| | |||||||||||||||    
T  27534769 cccatacccaaacccaatcaaaacggggaaaacccgtcaa 27534808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 32853829 - 32853980
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  32853829 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 32853928  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| | | ||||||||||||| |||| ||||||    
T  32853929 cccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggt 32853980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 92 - 433
Target Start/End: Complemental strand, 256803 - 256464
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| |||||||||||| ||| ||||| || | ||| ||||||||||||| |||||||| | ||||||||| ||||| ||||||||||| || |||    
T  256803 atgttgtaatgcattatccagcaaatagatgatgacgatcaatgactatggtgatggagaagagagaggtcgagattgtgagatatggaaggaaaagaga 256704  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatattt-atataaaaagggcaa 290  Q
     | |||| ||  || |   ||| || ||  | ||||| ||||||| | |||||    | |||||||  ||||| |||| ||||| | |||||| ||| |     
T  256703 tagaactttggcaaatgtgtgt-atatgtgacactgagactctgactatgtgaaagaattaatttagagtttgtgtttctattttaaataaaaggggtag 256605  T
Q  291 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 390  Q
    ||||||||||  || ||||||   || ||||||||||||| ||| | ||||||||| ||||| ||| ||||||||||||||||| |||||| ||||||||    
T  256604 taaattgatt--ttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggg 256507  T
Q  391 gaaaactcatacccaaacccaaacccaatcaaagcagggaaaa 433  Q
    ||||||||| || || |||||||| ||| |||||| |||||||    
T  256506 gaaaactcaaactcatacccaaacacaaccaaagcggggaaaa 256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 2367327 - 2367462
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| |||||||| ||||||||| |    
T  2367327 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccta 2367426  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| | || ||||||| |||| |||| ||||||    
T  2367427 gtcaaaacgggaaaaacccatcaaattgggtttggt 2367462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 3484026 - 3483875
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |||||||||| || | |||||||||||  | |||||||||||| ||||    
T  3484026 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccata 3483927  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  3483926 cacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 3483875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 33 - 300
Target Start/End: Complemental strand, 1948162 - 1947894
Alignment:
Q  33 atccccgcaatcgctaatttattttaataaaaataaaagnnnnnnn-agccacgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatc 131  Q
    ||||||||||  | |||||| ||||||||||||||||||        |||| | ||||||||  |||| |||||||||||  ||||||||| ||   ||     
T  1948162 atccccgcaacggataattttttttaataaaaataaaagtatctttcagcctcaagcgcaatagtgtaatgcattatccaacaaaaagatgatggtgatt 1948063  T
Q  132 gatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaac 231  Q
    |||| ||||||| | ||| |||| | ||||| ||| ||||| ||||| ||| |||||||||  ||||||||||||| | ||||||||||||| | || ||    
T  1948062 gatggctatggtcatggacaagagagaggtcaagattgtgagatatgaaagtagaaaagagggaactatgataagtgagtgtcatctgaaagtcagatac 1947963  T
Q  232 tctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgatt 300  Q
    ||||| |||||||||  ||| | ||| ||||||| ||| ||||||||||||| ||| ||||||||||||    
T  1947962 tctgactgtgtgagtataatgacttagggtttggatttttatttatataaaaggggtaataaattgatt 1947894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 12141370 - 12141521
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||| ||||||| | || ||||||||| | || ||||||||| ||||    
T  12141370 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccata 12141469  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||  ||||||||||| ||||| | ||||||||||||||| ||| |||||||    
T  12141470 cccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggt 12141521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 27738757 - 27738908
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| |||||  | |||||||||| | |||||||||||| |||||||||||||| ||||    
T  27738757 tttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 27738856  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||| ||||||| ||||| | || ||||||| |||| ||| |||||||    
T  27738857 cccatacctaaacccagtcaaaacgggaaaaacccatcaaattgaatttggt 27738908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 10188176 - 10188032
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | |||||||||||||||| ||||| ||||||||| |||||       ||||||| | |||||||||||| | |||||||||||| ||||    
T  10188176 tttttacatttgggatgggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccata 10188084  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  10188083 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 10188032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 9458667 - 9458787
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||| |||| |||| ||||||| |||| || || ||||||||||| ||    
T  9458667 tttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaaacccagtc 9458766  T
Q  421 aaagcagggaaaacccgtcaa 441  Q
    ||| | ||||||| |||||||    
T  9458767 aaatcggggaaaatccgtcaa 9458787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 458
Target Start/End: Complemental strand, 10142621 - 10142465
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  |||||||||||||||||| ||||||||| ||||| ||||||||| ||| | ||||||| |||| | |||||||||||| ||||    
T  10142621 tttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccata 10142522  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    |||| ||||||||||| ||||| |  |||||||||| ||| |||  |||||| ||||    
T  10142521 cccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtttggttcgag 10142465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 28079780 - 28079660
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||| || ||||| |||||||| ||  |    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagcc 28079681  T
Q  421 aaagcagggaaaacccgtcaa 441  Q
    ||||| || || |||||||||    
T  28079680 aaagcgggaaatacccgtcaa 28079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 29342230 - 29342114
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||||||||||||| |||||||||||  ||| |||||||| | |||||||| |||||| |||||||||||| ||| ||||||||||| ||||  ||||    
T  29342230 cgagcgcaatgttgtaatgcattatccaacaaagagatgttggcgatcgatgattatggtaaaggagaagaaagaggccgagagtgtgagatatcaaagg 29342131  T
Q  184 agaaaagagaaaactat 200  Q
    |||||||||| ||||||    
T  29342130 agaaaagagagaactat 29342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 24225683 - 24225840
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa------a 395  Q
    |||||||||| | || ||||||||| ||| ||||| ||||||||| ||||| ||||||||||||| | || ||||||||| | ||||||||||      |    
T  24225683 tttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccata 24225782  T
Q  396 ctcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | |||||||||||||||||||||||||| | ||||||||| ||||| ||| |||||||    
T  24225783 cccatacccaaacccaaacccaatcaaaacggggaaaacctgtcaaattgaatttggt 24225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 15498309 - 15498458
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||||||||| || ||||| | ||||||| ||||| ||| ||||| ||||| |||||||||||| |||||||||||||| ||||    
T  15498309 tttttacatttgggacgggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccata 15498408  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
     ||| ||||||||||| ||||| | | |||||||||| || |||| ||||    
T  15498409 tccatacccaaacccattcaaaacggagaaaacccgttaaattgggtttg 15498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 423
Target Start/End: Original strand, 29341131 - 29341362
Alignment:
Q  195 aactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaa-aagggc----a 289  Q
    ||||||||||||| |||||||||||||||| ||| | ||||| ||| | |||  ||| || || ||||||||||| |||||||||| | |||||     |    
T  29341131 aactatgataagtgattgtcatctgaaagattgagaatctgactgtataagtgaaatgatatagggtttgggtttctatttatatagataaggggtaaaa 29341230  T
Q  290 ataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    | ||| |||||  || |||||||| || ||||||||||||||||| | | ||||||| |||||| |||||||||||||| | ||| ||||| ||||||||    
T  29341231 aaaaaatgatt--ttctacattcgggacgggtttgggtatgagtttgggatgggtacctatatctccgttacccgtctcatgcccatgtttgaaaatcgg 29341328  T
Q  390 ggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    | ||||| || || || | |||||||||||||||    
T  29341329 gaaaaacccaaactcatatccaaacccaatcaaa 29341362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 32532525 - 32532674
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  32532525 tttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccata 32532624  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 451  Q
    | || || |||||||||| ||| | |  |||||||||||| |||||||||    
T  32532625 ctcatactcaaacccaatgaaaacggaaaaaacccgtcaaattggatttg 32532674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 29340693 - 29340805
Alignment:
Q  88 cgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaa 187  Q
    |||||||||||| |||||||||||  ||| |||||||| | || ||||| |||||| |||||||||||| ||| ||||||||||| |||| |||||||||    
T  29340693 cgcaatgttgtaatgcattatccaacaaagagatgttggcgattgatgattatggtaaaggagaagaaagaggccgagagtgtgagatatcgaaggagaa 29340792  T
Q  188 aagagaaaactat 200  Q
    |||||| ||||||    
T  29340793 aagagagaactat 29340805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 396
Target Start/End: Complemental strand, 8321107 - 8320804
Alignment:
Q  91 aatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaag 190  Q
    ||||||||| |||||||||||||||| ||||| ||   ||||||  ||||  ||| | ||||||   ||||| ||||||||| ||||||| | ||||||     
T  8321107 aatgttgtaatgcattatccagtaaagagatgatggggatcgatagctataatgatgaagaagagggaggtcaagagtgtgagatatggacgaagaaaat 8321008  T
Q  191 agaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaa 290  Q
    ||| ||||||||||||| | |||| |||||||||| || ||||||| ||||| |||  ||| ||||| |||||  |||| ||||||  ||||  | | ||    
T  8321007 agataactatgataagtgaatgtcgtctgaaagaccgagactctgactgtgtaagtgaaatgatttagggtttaagtttctatttacgtaaatggagtaa 8320908  T
Q  291 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 390  Q
    ||| |||||  ||||| |||||   | |||| |||||||| ||||| ||| | ||  |||||||| |||||| ||  |||||||||||||| |||| |||    
T  8320907 taagttgat--tttttgcattcagaacgggtctgggtatgggttcggggtcgatatctatatccctgttacctgttccgtacccgtgttttgaaattggg 8320810  T
Q  391 gaaaac 396  Q
    ||||||    
T  8320809 gaaaac 8320804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 394
Target Start/End: Complemental strand, 10925717 - 10925454
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactga 228  Q
    ||||||| ||||  ||| |||||||| | ||  |||| ||||||  ||||||||||||| ||||| ||||  || |||| | |||| | ||||||||| |    
T  10925717 atcgatggctataatgatggagaagagagagaccgagggtgtgaggtatggaaggagaagagagagaacttagagaagtgagtgtcgtttgaaagactaa 10925618  T
Q  229 aactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggta 328  Q
    |||| ||||||||| |||  ||| ||||| |||||  | || ||||||||||||| |   |||||||| ||| ||||||||||||  ||| |||| ||||    
T  10925617 aactttgattgtgttagtgaaatgatttagggtttcagattctatttatataaaaggaataataaatt-att-tttttacattcggaatgagtttaggta 10925520  T
Q  329 tgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa 394  Q
    || ||||| ||||| |||||||||| || |||||| |||||||||| |||||| ||| ||| ||||    
T  10925519 tgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaaacggagaaa 10925454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 249 - 453
Target Start/End: Original strand, 13769006 - 13769208
Alignment:
Q  249 aataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtactt 348  Q
    ||||||||| |||||| ||||  |||||||||||| | | ||||||||||||  || |||||||  || |||||||| |||| ||||  ||||||||| |    
T  13769006 aataatttatggtttgagtttcaatttatataaaaggagtaataaattgatt--ttctacattcaggacgggtttggatatgggttctgggtgggtacct 13769103  T
Q  349 atatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggat 448  Q
    ||||  |||||||||||| | ||||| |||||| || |||||||||||  | ||||| ||| ||||||| |||||||  | ||||||||| || |||| |    
T  13769104 atatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggt 13769203  T
Q  449 ttggt 453  Q
    |||||    
T  13769204 ttggt 13769208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 423
Target Start/End: Original strand, 9458861 - 9458964
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    |||||||||| |||||| ||||||||| ||||| |||||||||| || ||||||||| || | |||||||||||||| || ||||| ||||||||||| |    
T  9458861 gtttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaacccagacccatacccaaacccagt 9458960  T
Q  420 caaa 423  Q
    ||||    
T  9458961 caaa 9458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 32053089 - 32053221
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||| | ||||||||| ||||| ||||||||||||| | || || |||||| ||||||||||||      ||||| |||||||||||    
T  32053089 gggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaa------acccatacccaaaccca 32053182  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggtccg 456  Q
     ||||| | ||||||||||||||| |||| |||||||||    
T  32053183 gtcaaaacggggaaaacccgtcaaattgggtttggtccg 32053221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 441
Target Start/End: Original strand, 30986283 - 30986377
Alignment:
Q  347 ttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||||| ||||||||||||| | |||||||||||| | |||||||||||| |||||||| |||||||| || ||||| | |||||||||||||||    
T  30986283 ttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaa 30986377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 14410942 - 14410861
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||| |||||||||||    
T  14410942 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactca 14410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 418
Target Start/End: Original strand, 12309557 - 12309673
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||  ||||| ||||||||| ||||| || |||||||||  | |||||||||||| ||||| ||||| || ||||    
T  12309557 tttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaatacccata 12309656  T
Q  402 cccaaacccaaacccaa 418  Q
    |||| ||||||||||||    
T  12309657 cccatacccaaacccaa 12309673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 405
Target Start/End: Complemental strand, 24602955 - 24602856
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||||||||||||||||||||| ||||| ||||||||  ||||| || |||||||||| | ||||| |||||| ||||| |||||||| || |||||    
T  24602955 tacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaacccaaaccca 24602856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 30816245 - 30816394
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||| |||||| || |||||||| |||| ||||| ||||||| | ||||| ||| |||||| || | ||||||||||| ||||| |||||||||||| |    
T  30816245 tttttgcattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt-aaaat-ggggaaaactcaaa 30816342  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||||||||| | ||||||| || |||| |||| ||||||    
T  30816343 cccatatccaaacccaatcaaaacggggaaaatccatcaaattgggtttggt 30816394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 34178396 - 34178324
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccc 410  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||    
T  34178396 ggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaacccatacccaaaccc 34178324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 306 - 449
Target Start/End: Original strand, 11762434 - 11762577
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||||| | |||||||||||||||||||||| |||||  || ||||| ||||||||||||| | ||||| |||||  |||||||| |||||  | | |||    
T  11762434 tacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatcca 11762533  T
Q  406 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatt 449  Q
     | ||||||||| | |||   ||||||||||||||| |||||||    
T  11762534 tatccaaacccagtaaaaatggggaaaacccgtcaaattggatt 11762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 396
Target Start/End: Original strand, 18908877 - 18908972
Alignment:
Q  301 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||||||||||| |  ||||||||||||||||| | ||||||||| |||||||  |||||||||| | || |||| |||| ||||||||||||||    
T  18908877 ctttttacattcgggtagggtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaac 18908972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 425
Target Start/End: Original strand, 19367010 - 19367117
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||| |||||||| |  ||||| |  |||||||||||| ||||||||||||||||| ||||||||  |||||||| | |||||| ||    
T  19367010 gggtttgggtatgggtttgaggtgggcaactatattcatgttacccgtctcatacccgtgttttaaaattggggaaaatccatacccatatccaaactca 19367109  T
Q  418 atcaaagc 425  Q
     |||||||    
T  19367110 gtcaaagc 19367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 441
Target Start/End: Original strand, 9442452 - 9442553
Alignment:
Q  339 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 438  Q
    |||||||| | ||| ||||||||||||| | |||||||||||| |||||||| ||| | |||||||| ||||||| ||| ||||| | ||||||||||||    
T  9442452 gtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaa-ccagtcaaaacggggaaaacccgt 9442550  T
Q  439 caa 441  Q
    |||    
T  9442551 caa 9442553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 423
Target Start/End: Complemental strand, 12678190 - 12678076
Alignment:
Q  309 attcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaac 408  Q
    ||||| || ||||||||||||| ||||  ||||||||| ||||| ||| ||||||||| | |||| |||| || |||||||||||||| || || || ||    
T  12678190 attcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatac 12678091  T
Q  409 ccaaacccaatcaaa 423  Q
    ||||||||| |||||    
T  12678090 ccaaacccagtcaaa 12678076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 406
Target Start/End: Original strand, 32959795 - 32959949
Alignment:
Q  249 aataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtactt 348  Q
    ||||||||| ||||||||||  |  |||||||| | ||| ||||||||||||  || ||||||  ||| || ||||| |||| ||||| ||||| ||| |    
T  32959795 aataatttagggtttgggttactgcttatataataggggtaataaattgatt--ttctacatttatgacggatttgg-tatgggttcggggtggatacct 32959891  T
Q  349 atatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    |||||||||||||||||  |||||||||||||| ||||  |||||||| || ||||||    
T  32959892 atatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaacccaa 32959949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 441
Target Start/End: Original strand, 31496465 - 31496558
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||| |||||  |||||| | ||||| |||||  | ||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  31496465 tatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 31496558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 441
Target Start/End: Original strand, 31501851 - 31501944
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||| |||||  |||||| | ||||| |||||  | ||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  31501851 tatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 31501944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 431
Target Start/End: Complemental strand, 5109016 - 5108905
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||||||||| |||||||||||||||||| || |  | || | ||| | |||||| |||||||| |||||||| ||||| ||| ||||||| |    
T  5109016 gtttgggtatgagttcggggtgggtacttatatccctgtcattcatcccatacacatgttttgaaatcgggaaaaactcaaacccataccgaaacccagt 5108917  T
Q  420 caaagcagggaa 431  Q
     ||||| |||||    
T  5108916 aaaagctgggaa 5108905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 14034523 - 14034590
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    ||||||||| ||||| ||||||||||||||| |||  |||| |||||||||||||||||||| |||||    
T  14034523 ggtgggtacctatatacccgttacccgtctcatacttgtgtcttaaaatcggggaaaactcaaaccca 14034590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 29199970 - 29199895
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||||||| ||||| ||| | ||| |||||||| |||||||||| ||||||||| |||| |||||||||||||    
T  29199970 gtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 17546989 - 17546884
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||  || |||| |||| || | |||||| ||||| | || ||||| |||||||||||    
T  17546989 gggtttggatatgagttcggggtgggtacatgtatccccgttaccgatcccgtatccgtattatgaaatcgaggaaaccccaaacccatacccaaaccca 17546890  T
Q  418 atcaaa 423  Q
     |||||    
T  17546889 gtcaaa 17546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 20611054 - 20610946
Alignment:
Q  333 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaa 432  Q
    |||| ||||| ||| ||||| ||||||||||||| | ||||||| |||| |||||||||||| | || ||||| ||| ||||||| | ||| | || |||    
T  20611054 ttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccatacctaaacccagttaaatcgggaaaa 20610955  T
Q  433 acccgtcaa 441  Q
    |||||||||    
T  20610954 acccgtcaa 20610946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 253084 - 252973
Alignment:
Q  87 gcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggaga 186  Q
    |||| |||||||| | |||||||||| ||| ||||  ||   ||| ||||||||||||| |||||||| | ||||||||| ||||| ||||||||||| |    
T  253084 gcgcgatgttgtaattcattatccagcaaatagataatgatgatcaatgactatggtgatggagaagagagaggtcgagactgtgagatatggaaggaaa 252985  T
Q  187 aaagagaaaact 198  Q
    | ||||| ||||    
T  252984 agagagagaact 252973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 2126882 - 2126819
Alignment:
Q  142 gtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataa 205  Q
    ||||||||||| | | ||| | ||||||||| |||||||||||||||||||| |||||||||||    
T  2126882 gtgaaggagaaaagagaggccaagagtgtgagatatggaaggagaaaagagagaactatgataa 2126819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 24221438 - 24221537
Alignment:
Q  137 ctatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctga 236  Q
    |||||||||  ||||||| | |||  ||||||||||  ||||||| ||||||||||| ||||| ||||||| | |||||||| ||||||| | |||||||    
T  24221438 ctatggtgattgagaagagagaggctgagagtgtgagctatggaacgagaaaagagagaactacgataagtgagtgtcatcttaaagactaagactctga 24221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 14254962 - 14255063
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||  ||||||||| |||||  ||||||| |||| | |||||||| ||| ||||| | ||||||||| ||||| ||||||||||| ||    
T  14254962 tttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtg-tttgaaatcagagaaaactcaaacccatacccaaacccagtc 14255060  T
Q  421 aaa 423  Q
    |||    
T  14255061 aaa 14255063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 425
Target Start/End: Original strand, 30624477 - 30624523
Alignment:
Q  379 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||    
T  30624477 tttaaaatcggggaaaacccaaacccaaacccaaacccagtcaaagc 30624523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 14321646 - 14321777
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| |||| |||  | |||| ||||| || | ||| ||||||||| ||| |||||||| | ||   |||||||||| ||||| |||||||||    
T  14321646 gcaatgttgtaatgcaatattgaataaagagatgatgacgatcaatgactatgttgatggagaagagagag---gagagtgtgagatatgaaaggagaaa 14321742  T
Q  189 agagaaaactatgataagtaattgtcatctgaaaga 224  Q
    | ||| || |||||||||| |||||||||| |||||    
T  14321743 a-agagaattatgataagtgattgtcatcttaaaga 14321777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 422
Target Start/End: Complemental strand, 21875697 - 21875632
Alignment:
Q  357 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 422  Q
    |||| ||||| |||||||||||| |||||| || ||||||||| ||||||||| ||||||| ||||    
T  21875697 gttatccgtcccgtacccgtgttataaaattggagaaaactcaaacccaaaccaaaacccagtcaa 21875632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 300
Target Start/End: Complemental strand, 34179319 - 34179111
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| |||||||||||| ||| ||||| | |  |||||||| |||||||| |||||||| | ||   |||| |||||  ||||||||||||| |||    
T  34179319 atgttgtaatgcattatccagcaaagagatgatattgatcgatgagtatggtgatggagaagagagagactgagattgtgaggtatggaaggagaagaga 34179220  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaag-ggcaa 290  Q
    || |||| | | |||| | ||| || ||  |||| || |||||||  ||| || |  ||| ||||| |||||| |||| ||||||||||||||| || ||    
T  34179219 gagaactctaagaagtgagtgt-atatgtgagaccgagactctgaccgtgcgaataaaatgatttagggtttgagtttctatttatataaaaagaggtaa 34179121  T
Q  291 taaattgatt 300  Q
    ||||||||||    
T  34179120 taaattgatt 34179111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 395
Target Start/End: Complemental strand, 7393977 - 7393897
Alignment:
Q  315 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    |||| ||||| ||||| ||||| ||||| ||| ||||| ||| ||| ||||||| ||| |||||||| |||||||||||||    
T  7393977 gatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaa 7393897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 302 - 458
Target Start/End: Complemental strand, 44953538 - 44953382
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||||||||| |||| |||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44953538 tttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44953439  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    |||||||||||||||| ||||| | ||||||||||||||| |||| |||||| ||||    
T  44953438 cccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgag 44953382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 49580049 - 49580200
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||||||||||||||| ||||| | ||||||||||| | |||||||||||| | |||||||||||| ||||    
T  49580049 tttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccata 49580148  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  49580149 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 49580200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 138 - 450
Target Start/End: Original strand, 27252391 - 27252697
Alignment:
Q  138 tatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgat 237  Q
    ||||||||  ||||||| | ||| ||||||||||| ||||||||||||||| |||| ||||| ||||||| | |||||||||||||||||| ||||| |     
T  27252391 tatggtgattgagaagagagaggccgagagtgtgagatatggaaggagaaa-gagagaactaagataagtgagtgtcatctgaaagactgatactctaac 27252489  T
Q  238 tgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcga 337  Q
    |||||||||  ||| ||||| | ||| ||||| ||||||||||||| ||| ||||||||||    || |||||||  | || ||||||||||| |||| |    
T  27252490 tgtgtgagtgaaatgatttatgattttggtttctatttatataaaatgggtaataaattga--aattctacattcagggtgagtttgggtatgggttcaa 27252587  T
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
      ||||||| |||||| | |||| ||||| ||||||| || ||| |||| || ||||||||| || || ||||||||||||||||| | |  ||||||||    
T  27252588 --tgggtacctatatcactgttatccgtcccgtacccatg-tttgaaattggagaaaactcaaactcatacccaaacccaatcaaatccgataaaacccg 27252684  T
Q  438 tcaacttggattt 450  Q
    |||| || |||||    
T  27252685 tcaaattagattt 27252697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 39655376 - 39655225
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||| | ||||||||| ||||| || |||||||||| | |||||||||||| | |||||||||||| ||||    
T  39655376 tttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccata 39655277  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  39655276 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggt 39655225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 37032398 - 37032179
Alignment:
Q  101 tgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactat 200  Q
    |||||||| |||||||||||||  | | ||||||||||||||||| | |||||| | |||  ||||||||| ||||| ||||||||||||| | ||||||    
T  37032398 tgcattattcagtaaaaagatgacgacgatcgatgactatggtgatgaagaagagagaggctgagagtgtggaatattgaaggagaaaagaaagaactat 37032299  T
Q  201 gataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgatt 300  Q
    ||||| |   ||||||||||||||| || ||||||||||| |||||  ||| ||||| |||||| |||| ||||||||||||| ||| |||||||| ||     
T  37032298 gataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagggtttgagtttttatttatataaaatgggtaataaattaat- 37032202  T
Q  301 ctttttacattcgtgatgggtttg 324  Q
     ||| |||||||  ||||||||||    
T  37032201 -tttctacattcaggatgggtttg 37032179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 302 - 453
Target Start/End: Complemental strand, 48390920 - 48390769
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    ||||||| |||| || |||| |||||||| ||||  | ||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  48390920 tttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 48390821  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| |||||||||||    
T  48390820 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggt 48390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 321 - 470
Target Start/End: Original strand, 34119660 - 34119809
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 420  Q
    |||||||||| ||||| ||||||||| ||||| || |||| ||||||| ||||||||||||||||||||| |||||||| || || ||||||||||||||    
T  34119660 tttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatc 34119759  T
Q  421 aaagcagggaaaacccgtcaacttggatttggtccgagtggctacccaca 470  Q
    |||   ||||||||||||||| || |||||||| || |||| || |||||    
T  34119760 aaaatggggaaaacccgtcaaattagatttggttcgggtggttaaccaca 34119809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 453
Target Start/End: Complemental strand, 7469880 - 7469730
Alignment:
Q  303 ttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatac 402  Q
    ||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | ||| |||||||| |||||    
T  7469880 ttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatac 7469781  T
Q  403 ccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  7469780 ccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 7469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 44172611 - 44172732
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44172611 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44172710  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    |||| || |||||||| |||||    
T  44172711 cccatactcaaacccagtcaaa 44172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 44179311 - 44179432
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44179311 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44179410  T
Q  402 cccaaacccaaacccaatcaaa 423  Q
    |||| || |||||||| |||||    
T  44179411 cccatactcaaacccagtcaaa 44179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 39728656 - 39728807
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| |||||||||| || | ||||||| |||| | |||| |||||||  |||    
T  39728656 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctata 39728755  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    | || ||||||||||| ||||| | ||||||| ||||||| |||||||||||    
T  39728756 ctcatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggt 39728807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 450
Target Start/End: Original strand, 23580812 - 23580960
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | |||  || |||||||| |||||  |||||||| ||||| |||||||||||| || ||| |||||||| |||| ||||||||||||||    
T  23580812 tttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcata 23580911  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggattt 450  Q
    |||| ||||||||||| ||||| | || |||||||||||| ||| ||||    
T  23580912 cccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgaattt 23580960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 453
Target Start/End: Original strand, 42243346 - 42243523
Alignment:
Q  274 ttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacc 373  Q
    |||||||||| ||| ||||||||||||  || ||||||   ||||||||||||||||| || | ||||| ||  ||||||| |||||||| |||| ||||    
T  42243346 ttatataaaaggggtaataaattgatt--ttctacatttaggatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacc 42243443  T
Q  374 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||| || |||||||| ||||| || || || ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  42243444 cgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggtttggt 42243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 29284337 - 29284472
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| | ||||||| ||||| ||||||||||||| | |||||||||||  | |||||| ||||| |||||||| |||||||||||    
T  29284337 gggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaaccca 29284436  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| | | ||||||||||||| |||| ||||||    
T  29284437 gtcaaaacggagaaaacccgtcaaattgggtttggt 29284472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 44252748 - 44252871
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||| || ||||| |||| | |||||||||||  | |||||||||||| |||||||| |||||||||||    
T  44252748 gggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 44252847  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| | |||||||||||||||    
T  44252848 gtcaaaacggggaaaacccgtcaa 44252871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 52198156 - 52198279
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||| ||||||| | |||||| ||||| |||||||| |||||||||||    
T  52198156 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaaccca 52198255  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| |||  ||||||||||||    
T  52198256 gtcaaaacagaaaaaacccgtcaa 52198279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 453
Target Start/End: Original strand, 54317145 - 54317280
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||| ||| ||||| ||||||||| ||||| |||||||||||||   |||  ||||||| ||||||||||||||||| || || || ||||||||    
T  54317145 gggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaaccca 54317244  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     ||||| | ||||||||||||||| |||||||||||    
T  54317245 gtcaaaacggggaaaacccgtcaaattggatttggt 54317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 387
Target Start/End: Complemental strand, 30905016 - 30904834
Alignment:
Q  202 ataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattc 301  Q
    |||||| | |||||| |||||||||  |||||||| | | |||||  ||| ||| | ||||||||||| ||||||||||||| ||| | |||||||||      
T  30905016 ataagtgagtgtcatatgaaagactacaactctgactatatgagtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgat-- 30904919  T
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 387  Q
    ||  |||||||| || || |||||||||| ||||| ||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  30904918 ttcctacattcgagacggatttgggtatgggttcggggtgggtacctatatccccg-tacccgtcccgtacccgtgttttgaaatc 30904834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 446
Target Start/End: Complemental strand, 10043385 - 10043241
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||| ||||| ||||||| |||||||| ||||| ||||||| | |||| |||||||||||||| | ||||| |||||| ||| | |||||||| || |    
T  10043385 tttttatattcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaa 10043286  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    |||| ||||||||||| ||||||  | ||||||||||||| ||||    
T  10043285 cccatacccaaacccagtcaaagtggagaaaacccgtcaaattgg 10043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 44639275 - 44639403
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | ||  |||||||| |||||||| |||||||||||    
T  44639275 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaaccca 44639374  T
Q  418 atcaaagcagggaaaacccgtcaacttgg 446  Q
     |||||   ||||||||| ||||| ||||    
T  44639375 gtcaaaatggggaaaaccagtcaaattgg 44639403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 19111755 - 19111870
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||||||||||||| ||||||| || || |||||||||||||| |||||||| |||||||| || || |||||||||||||||||   || |||| |||    
T  19111755 ggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaaagggaaaaatccg 19111854  T
Q  438 tcaacttggatttggt 453  Q
    |||| |||||||||||    
T  19111855 tcaaattggatttggt 19111870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 29842293 - 29842443
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||| ||| | |||||||||||||||||| |||||||| ||||    
T  29842293 tttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatc-gggaaaacccata 29842391  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    || | ||||||||||||||  | || | |||||||||||| || ||||||||    
T  29842392 cctatacccaaacccaatccgaacatgaaaaacccgtcaaattagatttggt 29842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 34025939 - 34026090
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||||||||| |||||  || ||||| | ||||||||||| | |||| ||||||| |||||||||||||| ||||    
T  34025939 tttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccata 34026038  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||| | ||||||||| ||||| | || |||| ||||||| |||| ||||||    
T  34026039 cccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttttggt 34026090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 34154399 - 34154538
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| |  ||||||||| || ||||| |||||| |||||||||||||| ||||    
T  34154399 tttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaacacata 34154498  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| | ||||||||| ||||| | ||||||| |||||||    
T  34154499 cccatatccaaacccagtcaaaacggggaaaatccgtcaa 34154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 4557402 - 4557264
Alignment:
Q  308 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 407  Q
    |||||| ||| | |||||||||| ||||| ||||||||| ||||| | ||||||||||| | ||||| |||||| ||| |||||||||| || ||||| |    
T  4557402 cattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccata 4557303  T
Q  408 cccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    |||||||||| ||||| | || |||||||||||| ||||    
T  4557302 cccaaacccagtcaaaacgggaaaaacccgtcaaattgg 4557264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 411
Target Start/End: Complemental strand, 23547045 - 23546936
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || | ||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  23547045 tttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 23546946  T
Q  402 cccaaaccca 411  Q
    ||||||||||    
T  23546945 cccaaaccca 23546936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 320 - 441
Target Start/End: Original strand, 53631907 - 53632028
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||| ||||| ||||| ||||||||| ||||| ||||||||||||||| ||| |||||||||||||  ||||||||||| ||||| ||| | ||||| |    
T  53631907 gtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccatt 53632006  T
Q  420 caaagcagggaaaacccgtcaa 441  Q
    |||| |  ||||||||||||||    
T  53632007 caaaacgaggaaaacccgtcaa 53632028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 441
Target Start/End: Complemental strand, 22535920 - 22535805
Alignment:
Q  326 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    ||||| ||||| ||||||| | | ||| ||||||||||||| | || ||||||||| |||| |||||||||||||||||| ||||||||||| ||||| |    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 22535821  T
Q  426 agggaaaacccgtcaa 441  Q
     |||||||||| ||||    
T  22535820 ggggaaaacccatcaa 22535805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 43582598 - 43582713
Alignment:
Q  338 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 437  Q
    ||||||||| || || | ||||||||||||| |||||||||||| |||||||||||||||||||| || || |||||||| | ||| | | ||||||||     
T  43582598 ggtgggtacctacatacacgttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaaccca 43582697  T
Q  438 tcaacttggatttggt 453  Q
    |||| |||||||||||    
T  43582698 tcaaattggatttggt 43582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 453
Target Start/End: Complemental strand, 48305728 - 48305593
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||  ||||| ||||||||| ||||| |||| ||| |||  | |||||||||||| |||| |||||||||||||||||| | |||||||||    
T  48305728 gggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccataaccaaaccca 48305629  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     |||||   ||||||||||||||  |||| ||||||    
T  48305628 gtcaaaatggggaaaacccgtcagattgggtttggt 48305593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 441
Target Start/End: Original strand, 52572594 - 52572733
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||| ||| |||||  |||| ||||||| | ||||| ||||||||||||| | |||||||||||| | |||| ||||||||||||    
T  52572594 tttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcata 52572693  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| ||||||||||| |||||   ||||||||| |||||    
T  52572694 cccatacccaaacccagtcaaaatggggaaaacctgtcaa 52572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 441
Target Start/End: Complemental strand, 4016129 - 4016008
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||| |||||  |||||||| ||||| ||||||| ||||| | ||||| |||||| |||||||||||||| || ||||| ||||||||| | |    
T  4016129 gtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagt 4016030  T
Q  420 caaagcagggaaaacccgtcaa 441  Q
    |||| | || ||||||||||||    
T  4016029 caaaacgggaaaaacccgtcaa 4016008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 351 - 435
Target Start/End: Complemental strand, 3414591 - 3414507
Alignment:
Q  351 atccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacc 435  Q
    |||||||||||| ||| ||||| ||||||| ||||||||| |||||||| ||||| | ||||||||||||||||| |||||||||    
T  3414591 atccccgttacctgtcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacc 3414507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 40890141 - 40890254
Alignment:
Q  90 caatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaa 189  Q
    |||||||||| |||||||||||||||| ||||| |  | ||| ||||||||| ||| |||||||| |  ||||| |||||||| | ||||||||||||||    
T  40890141 caatgttgtaatgcattatccagtaaatagatgataacgatcaatgactatgatgatggagaagaga--ggtcgggagtgtgagagatggaaggagaaaa 40890238  T
Q  190 gagaaaactatgataa 205  Q
    |||| |||||||||||    
T  40890239 gagagaactatgataa 40890254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 453
Target Start/End: Complemental strand, 3386092 - 3385808
Alignment:
Q  167 gtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttggg 266  Q
    |||||| ||||||||||||| |||||| |||| |||||||  | ||||| || |||||| || ||| | | | ||| |||  ||| ||||| | ||| |     
T  3386092 gtgtgagatatggaaggagataagagagaactttgataagagagtgtcaactaaaagaccgagactttaactatgtaagtgaaatgatttaggatttcga 3385993  T
Q  267 tttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtc 366  Q
    ||| |||||||| |||| ||  | |||| |||||  ||||||||| |  | |||||| ||||||  |||| ||||| ||| ||||||| ||||||| |||    
T  3385992 tttttatttatagaaaagggttactaaaatgatt--ttttacattaggtacgggttttggtatggattcgtggtggctacctatatcctcgttacctgtc 3385895  T
Q  367 tcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
     |||||||||||||| |||| ||  |||| ||| | ||| ||| ||||||| ||||||| ||||||||||||| | |||| ||||||    
T  3385894 ccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggt 3385808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 436
Target Start/End: Original strand, 4553135 - 4553309
Alignment:
Q  259 ggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgt 358  Q
    |||||| |||| ||||||||||||||    ||||||||||||  ||||||||||| || ||||||| ||||| ||||| |||| ||| |||||||||  |    
T  4553135 ggtttgagtttttatttatataaaaaaat-aataaattgatt--ttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctat 4553231  T
Q  359 tacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaaccc 436  Q
    |||||||  || |||| |||||| |||||||| |||||||| || || ||| || |||| ||||||| | ||||||||    
T  4553232 tacccgttccgcacccatgttttgaaatcgggaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaaccc 4553309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 773064 - 772897
Alignment:
Q  134 tgactatggtgaaggagaagaaaaaggtcg--agagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaac 231  Q
    ||||||||||||||||||||| | ||||||  ||||||||| | ||| |||||||||||||| || ||||| |||  | ||||||||  |||  ||| ||    
T  773064 tgactatggtgaaggagaagagagaggtcgatagagtgtgagacatgaaaggagaaaagagagaaatatgacaagcgagtgtcatctagaagtgtgagac 772965  T
Q  232 tctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgatt 300  Q
    |  ||||||||||||  ||| ||| |||||||| |||| ||||||||  ||||||| ||||||||||||    
T  772964 ttagattgtgtgagtgaaatgattcaaggtttgagtttctatttata-caaaagggtaataaattgatt 772897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 6738440 - 6738357
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| | || |||||| ||||| |||| ||||||    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggt 6738357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Original strand, 20087050 - 20087133
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    |||||||||||| |||||||||||||| |||||||| | ||||||||| ||||| | | ||||| ||||||| |||||||||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattggatttggt 20087133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 452
Target Start/End: Original strand, 42758375 - 42758509
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||  ||| ||||| || |||||||||| | |||| ||||||| ||||||||| |||| || || || |||||||||||    
T  42758375 gggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaaccca 42758474  T
Q  418 atcaaagcagggaaaacccgtcaacttggatttgg 452  Q
     | ||| | ||||||| ||||||| |||| |||||    
T  42758475 gttaaaacggggaaaatccgtcaaattgggtttgg 42758509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 441
Target Start/End: Complemental strand, 1772504 - 1772363
Alignment:
Q  300 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||| |||||||| |  ||||||| ||||||||||| ||||||||| ||||||| | |||| || |  |||||||| |||||||||||  |||||| ||    
T  1772504 tctttctacattcgggtagggtttgtgtatgagttcggggtgggtacatatatccgcattactcgccctgtacccgtattttaaaatcgaagaaaaccca 1772405  T
Q  400 tacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
     | ||| ||||| ||||| ||||| | ||||||| |||||||    
T  1772404 aaaccatacccagacccagtcaaatcggggaaaatccgtcaa 1772363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 34593119 - 34593208
Alignment:
Q  306 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 395  Q
    ||||||| ||| || |||||||||||||||| | |||||||| |||| | ||||||| |||| |||||| ||||||||||||| ||||||    
T  34593119 tacattcatgacggatttgggtatgagttcgggatgggtactgatattctcgttacctgtcttgtacccatgttttaaaatcgaggaaaa 34593208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 435
Target Start/End: Complemental strand, 44106895 - 44106763
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||| ||||| ||||| ||| | ||| |||||  ||||||| |||| | |||||||||||||| || ||||||||| ||||    
T  44106895 tttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaac-cata 44106797  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacc 435  Q
    | || ||||||||||| ||||| | |||||||||    
T  44106796 ctcatacccaaacccagtcaaaacggggaaaacc 44106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 446
Target Start/End: Complemental strand, 23154167 - 23154024
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||| ||| || ||||| |||||  |||||||| ||||| | ||||||||||  | ||||||||||| ||| ||||||||||| ||||    
T  23154167 tttttacatttgggataggtatgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtgtttgaaa-tcggggaaaacccata 23154069  T
Q  402 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 446  Q
    |||| |||||||| || | ||| | || |||||||||||| ||||    
T  23154068 cccatacccaaactcagttaaaacgggaaaaacccgtcaaattgg 23154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 41937070 - 41937006
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaa 412  Q
    ||||| ||||||| ||||||| ||| ||||||||||||||||||||||| ||||| |||||||||    
T  41937070 tatatacccgttatccgtctcatactcgtgttttaaaatcggggaaaacccatactcaaacccaa 41937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 458
Target Start/End: Complemental strand, 10371283 - 10371220
Alignment:
Q  395 actcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgag 458  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||| |||| |||||| ||||    
T  10371283 actcatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgag 10371220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 300
Target Start/End: Original strand, 26207109 - 26207269
Alignment:
Q  137 ctatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctga 236  Q
    ||||| ||| |||||||| | ||| ||||||||||| |||||| |||||||||  || |||||||| |||| | |||||||| |||||  || ||||| |    
T  26207109 ctatgatgatggagaagagagaggccgagagtgtgagatatgggaggagaaaaatgagaactatgacaagtgagtgtcatctaaaagatggagactctaa 26207208  T
Q  237 ttgtgtgagttgaataatttaaggtttgggtttatatttatat-aaaaagggcaataaattgatt 300  Q
     |||||||    ||| ||||| |||||||||||  |||||||| ||||| || ||||||||||||    
T  26207209 ctgtgtga----aatgatttagggtttgggtttcaatttatataaaaaaaggtaataaattgatt 26207269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 423
Target Start/End: Complemental strand, 35687554 - 35687473
Alignment:
Q  342 ggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||| |||||| | |||||||||||||||||||| || | ||||||||||||||||| || || || |||||||| |||||    
T  35687554 ggtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaa 35687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 2490336 - 2490411
Alignment:
Q  348 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 423  Q
    ||||||||| ||||||||   |||||||| |||| ||||||||||||||||| ||||| | ||||||||| |||||    
T  2490336 tatatccccattacccgttctgtacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 405
Target Start/End: Original strand, 49025666 - 49025768
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || ||||||||||||| ||||| | || |||| ||||| || |||||||||| | |||||||||||| | |||||||||||| || |    
T  49025666 tttttacatttgggacgggtttgggtatgggttcg-gatgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccaaa 49025764  T
Q  402 ccca 405  Q
    ||||    
T  49025765 ccca 49025768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 34592933 - 34593083
Alignment:
Q  92 atgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaaga 191  Q
    |||||||| ||||||||||| |||| ||||| ||   |||||| |||||   ||   |||||| | ||||||||||||||| |||||||||||||||  |    
T  34592933 atgttgtaatgcattatccaataaagagatggtggtgatcgataactataaggataaagaagagagaggtcgagagtgtgagatatggaaggagaaacaa 34593032  T
Q  192 gaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgt 242  Q
     | ||||||||||||| | ||| || |||||||| || || || |||||||    
T  34593033 tagaactatgataagtgagtgttatgtgaaagaccgagaccctaattgtgt 34593083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 10823796 - 10823692
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | ||  |||||||||||| ||||| ||   |||||||||| ||||||| |  |||| |||||||||||| | ||||| |||||| ||||    
T  10823796 tttttacatttgggagaggtttgggtatgggttcgggg---gtacttatatacccgttatcaatctcatacccgtgttttgagatcggagaaaacccata 10823700  T
Q  402 cccaaacc 409  Q
    ||||||||    
T  10823699 cccaaacc 10823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 406
Target Start/End: Original strand, 27937545 - 27937827
Alignment:
Q  129 atcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaaagagaaaactatgataagtaattgtcatctg--------a 220  Q
    |||||||| |||| |||  ||||||| | ||  ||||||||||| |||||||| ||||||||| | |||||| |||||| | |||||| ||        |    
T  27937545 atcgatgaatatgatgatagagaagagagagaccgagagtgtgagatatggaaagagaaaagaaagaactataataagtgagtgtcatttgaaagagtca 27937644  T
Q  221 aagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacattcgtgatggg 320  Q
    |||| ||| ||||  || ||||||||  ||| ||||| ||||| ||||| |||||||||||||   | |||||||| ||  ||  |||||||  | | ||    
T  27937645 aagattgagactcaaatcgtgtgagtgaaatgatttagggtttaggtttctatttatataaaagctgtaataaattaat--ttcctacattc-aggtagg 27937741  T
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 406  Q
    |||||||||||||||| |||| |||| | |||||| |||||| |||   ||| | ||||||||||||  |||||||||| ||||||    
T  27937742 tttgggtatgagttcgtggtgtgtacctctatccctgttacctgtcctatacacatgttttaaaatcaaggaaaactcaaacccaa 27937827  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 405
Target Start/End: Complemental strand, 30616368 - 30616281
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 405  Q
    |||| |||||||| ||||| ||||| ||  |||| || ||||||||||| | || ||||||||| |||||||||||||| || |||||    
T  30616368 gggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaaccca 30616281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 411
Target Start/End: Original strand, 831013 - 831102
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 411  Q
    |||||||||| ||||  |||||||||  |||| | ||||| ||||||| |||||||||||| ||| |||| || || ||||||||||||||    
T  831013 tttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaacgggaaatacccatacccaaaccca 831102  T

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Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 40796223 - 40796153
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 389  Q
    ||||||||||||| || | ||||||||| | ||||| | ||||||||| ||||||||| |||| |||||||    
T  40796223 ggtttgggtatgactttggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcgg 40796153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 31271344 - 31271299
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttaccc 363  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  31271344 gggtttgagtatgagttcggggtgggtacctatatcccagttaccc 31271299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 441
Target Start/End: Original strand, 30682876 - 30682944
Alignment:
Q  373 ccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    |||| |||| || |||||||||||||||| |||  |||||||||| ||||| ||| ||||||| |||||    
T  30682876 ccgtatttttaagtcggggaaaactcatatccattcccaaacccagtcaaaacagagaaaacctgtcaa 30682944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 396
Target Start/End: Complemental strand, 4899 - 4590
Alignment:
Q  84 cgagcgcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaagg 183  Q
    |||||| ||||||||| |||||||||||| ||| ||||| || | |||||||  |||| |||  ||||||| | ||  ||| ||||||||||||||||||    
T  4899 cgagcgaaatgttgtaatgcattatccagcaaagagatgatggcgatcgatgtatatgttgatagagaagagagagaccgatagtgtgaaatatggaagg 4800  T
Q  184 agaaaagagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaa 283  Q
    | |||||||| ||||||||||||| | ||| |||| |||||| |  ||||||| |||||||||  ||| |||||  |||| | ||| |||||||||||||    
T  4799 aaaaaagagagaactatgataagtgagtgttatctaaaagaccgtgactctgactgtgtgagtgaaatgatttagagttttgatttctatttatataaaa 4700  T
Q  284 agggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaa 383  Q
     |||  |||| |||||  ||| |||||||  | | || || |||||| ||||| ||||||||  |||||||| |||||| ||| | ||||||| |||| |    
T  4699 ggggttataatttgat--tttctacattcaaggt-ggcttaggtatgggttcgtggtgggtagctatatccctgttacctgtcccatacccgtattttga 4603  T
Q  384 aatcggggaaaac 396  Q
    ||| |||||||||    
T  4602 aattggggaaaac 4590  T

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Target: scaffold0036 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 418
Target Start/End: Original strand, 33396 - 33494
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 418  Q
    ||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| || ||||| ||||||||||||    
T  33396 gtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 33494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 441
Target Start/End: Original strand, 14755 - 14972
Alignment:
Q  212 gtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggcaataaattgattctttttacatt 311  Q
    ||||||||||||||||| ||| |||||||| || |  ||| |||||| ||||  |||| ||||||||||||| ||| |||||||||||   |||||| ||    
T  14755 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgat--gttttacctt 14852  T
Q  312 cgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccc- 410  Q
    |  || ||||||||||||||||||  |||||||||| |||||||| |           |||||||||||| |||||||||||||| || || || ||||     
T  14853 caggacgggtttgggtatgagttcagggtgggtactaatatccccat-----------tacccgtgttttgaaatcggggaaaacccaaactcataccct 14941  T
Q  411 aaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||||||| | |||||||||||||    
T  14942 aaacccaatcaaagcggagaaaacccgtcaa 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 320 - 423
Target Start/End: Original strand, 211367 - 211470
Alignment:
Q  320 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 419  Q
    ||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| || |    
T  211367 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagt 211466  T
Q  420 caaa 423  Q
    ||||    
T  211467 caaa 211470  T

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Target: scaffold0008 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 67750 - 67873
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||  | ||| ||||||||| ||||||||||||| ||||| |||| |||| ||||||||||||||||||  || ||||| || ||||||||    
T  67750 gggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaaccca 67849  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| | ||||||||| |||||    
T  67850 gtcaaatcggggaaaacctgtcaa 67873  T

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Target: scaffold0008; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 75593 - 75716
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||  | ||| ||||||||| ||||||||||||| ||||| |||| |||| ||||||||||||||||||  || ||||| || ||||||||    
T  75593 gggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaaccca 75692  T
Q  418 atcaaagcagggaaaacccgtcaa 441  Q
     ||||| | ||||||||| |||||    
T  75693 gtcaaatcggggaaaacctgtcaa 75716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 89 - 326
Target Start/End: Original strand, 886 - 1120
Alignment:
Q  89 gcaatgttgtattgcattatccagtaaaaagatgttgtcaatcgatgactatggtgaaggagaagaaaaaggtcgagagtgtgaaatatggaaggagaaa 188  Q
    ||||||||||| |||| ||| || |||| |||||  | | ||| |||| |||| ||| |||||||| | |||  |||||||||| ||||| |||||||||    
T  886 gcaatgttgtaatgcaatattcaataaagagatgacgacgatcaatgaatatgttgatggagaagagagaggaggagagtgtgagatatgaaaggagaaa 985  T
Q  189 agagaaaactatgataagtaattgtcatctgaaagactgaaactctgattgtgtgagttgaataatttaaggtttgggtttatatttatataaaaagggc 288  Q
    | ||| || |||||||||| |||||||||| ||||| ||| ||| |||    ||||||  ||| ||||||| |||| |||| ||||||||||||| |||     
T  986 a-agagaattatgataagtgattgtcatcttaaagaatgagactttgaccacgtgagtgaaatgatttaagatttgagtttctatttatataaaatgggt 1084  T
Q  289 aataaattgattctttttacattcgtgatgggtttggg 326  Q
    |||||||| ||  ||| ||||||| ||| |||||||||    
T  1085 aataaattaat--tttctacattcatgacgggtttggg 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 411
Target Start/End: Original strand, 90601 - 90691
Alignment:
Q  321 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 411  Q
    |||| ||||| ||||| || ||||||  |||| ||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  90601 tttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaaacccatacccaaaccca 90691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 2970 - 3075
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||| ||||| ||||| ||||||||| |||||||| |||| |||||  |||||||| |||| |||||||||||||| || || || |||||||||||    
T  2970 gggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaaccca 3069  T
Q  418 atcaaa 423  Q
     |||||    
T  3070 gtcaaa 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 20853 - 20749
Alignment:
Q  289 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    ||||||||||||  |||||||||||  | ||||||| ||||| ||||||||||| || |||||||||| ||||||||||| ||| || ||||| ||||||    
T  20853 aataaattgatt--ttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaatcg 20756  T
Q  389 gggaaaa 395  Q
    || ||||    
T  20755 ggaaaaa 20749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 128208 - 128103
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 417  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||||||| ||||||||| || | |||| ||  ||||| || || || || ||||||||    
T  128208 gggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatactcaaaccca 128109  T
Q  418 atcaaa 423  Q
    ||||||    
T  128108 atcaaa 128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 105556 - 105498
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgt 376  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||||||||| |||||||||    
T  105556 gggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 435
Target Start/End: Complemental strand, 107469 - 107361
Alignment:
Q  327 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 426  Q
    |||||||||| ||||||||||||||||   | |||||||| | |||| ||||||| |||||| | |||||||| ||| | ||| ||||||||||||||      
T  107469 tatgagttcggggtgggtacttatatctatgctacccgtcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtg 107370  T
Q  427 gggaaaacc 435  Q
    |||||||||    
T  107369 gggaaaacc 107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 14218 - 14136
Alignment:
Q  370 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 453  Q
    ||||||||||||||| |||||||||||||| || || |||||||||||| |||| | || |||||||||||| |||| ||||||    
T  14218 tacccgtgttttaaa-tcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggt 14136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 16969 - 17049
Alignment:
Q  319 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 399  Q
    ||||||| |||||||||| ||||||||| ||||||||||| ||||||| | ||| ||| |||| |||||||| ||| ||||    
T  16969 ggtttggatatgagttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcgggaaaagctca 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 70096 - 70154
Alignment:
Q  318 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgt 376  Q
    ||||||||||||| ||| | ||||||||| ||||||| ||||||||||| |||||||||    
T  70096 gggtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgt 70154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 425
Target Start/End: Original strand, 449764 - 449810
Alignment:
Q  379 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 425  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||    
T  449764 tttaaaatcggggaaaacccaaacccaaacccaaacccagtcaaagc 449810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 409
Target Start/End: Original strand, 10282 - 10388
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 401  Q
    |||||||||| | || |||| |||||||| |||||  |||||||| ||||| || |||| ||||| | |||||||||||  ||| | |||||||| ||||    
T  10282 tttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagc-gggaaaacccata 10380  T
Q  402 cccaaacc 409  Q
    ||||||||    
T  10381 cccaaacc 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 7738 - 7820
Alignment:
Q  358 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||||||| |||||||||||| |||| || ||||| ||  || || |||||||| |||||||| | |||||||||||||||    
T  7738 ttacccgtctcatacccgtgttttgaaattggagaaaa-tctaacacatacccaaactcaatcaaaacggggaaaacccgtcaa 7820  T

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Target: scaffold0189 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Original strand, 4243 - 4329
Alignment:
Q  302 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 388  Q
    |||||||||| | || | ||||||||||| ||| || ||||||||  |||| | ||||||| ||||| |||||||||||| ||||||    
T  4243 tttttacatttgggacgagtttgggtatgggtttgaagtgggtacaaatatactcgttaccagtctcatacccgtgttttgaaatcg 4329  T

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Target: scaffold0795 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 267 - 348
Alignment:
Q  360 acccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 441  Q
    ||||||| | |||||||||||| | || | |||||||| ||||||| |||||||| || ||||| | | |||||||||||||    
T  267 acccgtcccatacccgtgttttgagattgaggaaaactgatacccatacccaaactcagtcaaaacggagaaaacccgtcaa 348  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 56002 - 55907
Alignment:
Q  300 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 396  Q
    ||||| |||||||| |  |||||||||||||  |||| ||||||||| |||||||| ||||||| ||  |||||| | |||| |||| |||||||||    
T  56002 tctttctacattcgggtagggtttgggtatggattcggggtgggtacatatatccctgttaccc-tcctgtacccatattttgaaattggggaaaac 55907  T

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