View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18620_high_13 (Length: 285)
Name: NF18620_high_13
Description: NF18620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18620_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 33698012 - 33697755
Alignment:
| Q |
11 |
cagagaggagatgctacctctaccaaaaaccttaaaacatcatgtatattaaccacttctcgtatttaacgttttggcaattaatagtcgacgtaggata |
110 |
Q |
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| T |
33698012 |
cagagaggagatgctacctctaccaaaaaccttaaaacatcatgtatattaaccacttctcgtatttaacgttttggcaattaatagtcgacatgggata |
33697913 |
T |
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| Q |
111 |
taactactcacacttgaaca-aacaaccctaacaccagcgagacagaaaagagcaacaaagaacattataagatatacaagacgagcaccccacgcctat |
209 |
Q |
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|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33697912 |
taactactcacacttgaacagaacaaccctaacaccaacgagacagaaaagagcaacaaagaacattataagatatacaagacgagcaccccacgcctat |
33697813 |
T |
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| Q |
210 |
ttccctatttacaatagttcacagttgcggtcctcatctgtaatttgaccgcaatata |
267 |
Q |
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| T |
33697812 |
ttccctatttacaatagttcacagttgcggtcctcatctgtaatttgaccgcaatata |
33697755 |
T |
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