View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18622_high_1 (Length: 753)

Name: NF18622_high_1
Description: NF18622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18622_high_1
NF18622_high_1
[»] chr3 (4 HSPs)
chr3 (87-737)||(25914943-25915593)
chr3 (168-737)||(25901006-25901575)
chr3 (7-52)||(25914862-25914907)
chr3 (438-525)||(12734787-12734874)
[»] chr4 (29 HSPs)
chr4 (188-734)||(10571023-10571569)
chr4 (188-734)||(10553293-10553839)
chr4 (437-670)||(10460466-10460699)
chr4 (433-658)||(8443446-8443671)
chr4 (433-656)||(10482036-10482259)
chr4 (441-669)||(6388082-6388310)
chr4 (442-671)||(6392661-6392893)
chr4 (433-668)||(8447646-8447881)
chr4 (433-666)||(10493520-10493755)
chr4 (433-656)||(10467898-10468120)
chr4 (433-671)||(10464106-10464347)
chr4 (433-513)||(837774-837854)
chr4 (168-326)||(10464472-10464630)
chr4 (435-512)||(53774839-53774916)
chr4 (173-249)||(10482452-10482528)
chr4 (441-513)||(6372443-6372515)
chr4 (433-496)||(829589-829652)
chr4 (176-251)||(10475482-10475557)
chr4 (455-658)||(10475057-10475260)
chr4 (171-254)||(829343-829425)
chr4 (187-249)||(10468313-10468375)
chr4 (169-246)||(8437025-8437102)
chr4 (169-246)||(8447379-8447456)
chr4 (439-512)||(11970980-11971053)
chr4 (203-255)||(838005-838057)
chr4 (590-661)||(829721-829792)
chr4 (176-251)||(10484704-10484779)
chr4 (625-670)||(1110987-1111032)
chr4 (459-512)||(35767017-35767070)
[»] chr1 (3 HSPs)
chr1 (441-646)||(50645485-50645690)
chr1 (441-511)||(4570927-4570997)
chr1 (578-671)||(4366632-4366725)
[»] chr2 (7 HSPs)
chr2 (440-562)||(25377023-25377145)
chr2 (443-525)||(18913559-18913641)
chr2 (439-522)||(20975547-20975630)
chr2 (443-513)||(18908811-18908881)
chr2 (443-513)||(18920767-18920837)
chr2 (441-529)||(14514882-14514970)
chr2 (464-542)||(20980573-20980651)
[»] chr7 (21 HSPs)
chr7 (457-666)||(26256620-26256829)
chr7 (435-542)||(22063611-22063718)
chr7 (435-542)||(22100462-22100569)
chr7 (438-526)||(19357895-19357983)
chr7 (439-510)||(660845-660916)
chr7 (435-542)||(22070080-22070187)
chr7 (435-542)||(22080837-22080944)
chr7 (457-523)||(22028616-22028682)
chr7 (435-512)||(14076677-14076754)
chr7 (435-512)||(14386705-14386782)
chr7 (457-542)||(15571911-15571996)
chr7 (461-602)||(19637237-19637378)
chr7 (441-529)||(1985955-1986043)
chr7 (523-615)||(19597737-19597828)
chr7 (204-251)||(19645452-19645499)
chr7 (457-554)||(16846480-16846577)
chr7 (441-529)||(20058057-20058145)
chr7 (463-542)||(9807793-9807872)
chr7 (459-509)||(24031257-24031307)
chr7 (457-554)||(16839397-16839494)
chr7 (464-509)||(23999478-23999523)
[»] chr5 (3 HSPs)
chr5 (170-311)||(37935285-37935426)
chr5 (454-509)||(23086784-23086839)
chr5 (435-505)||(18964824-18964894)
[»] chr6 (7 HSPs)
chr6 (464-666)||(19746717-19746919)
chr6 (439-511)||(20770650-20770722)
chr6 (443-513)||(6954521-6954591)
chr6 (441-554)||(6947880-6947993)
chr6 (464-553)||(33576128-33576217)
chr6 (441-513)||(6921350-6921422)
chr6 (435-496)||(17369679-17369740)
[»] scaffold0867 (1 HSPs)
scaffold0867 (435-542)||(4663-4770)
[»] scaffold0464 (1 HSPs)
scaffold0464 (438-525)||(8047-8134)
[»] chr8 (1 HSPs)
chr8 (435-542)||(27618460-27618567)


Alignment Details
Target: chr3 (Bit Score: 627; Significance: 0; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 627; E-Value: 0
Query Start/End: Original strand, 87 - 737
Target Start/End: Original strand, 25914943 - 25915593
Alignment:
Q  87 tttgatttcaaacaactgaatcggttaagcaatcccacaatctatttctagtattataaattaaaccaacaaggctgtaaagaagtaacataaattctat 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25914943 tttgatttcaaacaactgaatcggttaagcaatcccacaatctatttctagtattataaattaaaccaacaaggctgtaaagaagtgacataaattctat 25915042  T
Q  187 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915043 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaa 25915142  T
Q  287 ttggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatgg 386  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915143 ttggctcgcctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatgg 25915242  T
Q  387 caagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaa 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915243 caagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaa 25915342  T
Q  487 tccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcactt 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  25915343 tccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggctgaacacgtggcacct 25915442  T
Q  587 cgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctcaacagtaatcttactaacattatc 686  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  25915443 cgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagcgaaacaatcacatattgctcaacagtaatcttactaacattatc 25915542  T
Q  687 aaattcatagtcagaatagaagtaattgcgaagtgccaaccagttaatagt 737  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915543 aaattcatagtcagaatagaagtaattgcgaagtgccaaccagttaatagt 25915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 168 - 737
Target Start/End: Original strand, 25901006 - 25901575
Alignment:
Q  168 gaagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgt 267  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  25901006 gaagtaacataaattctaacaagtaatatgagaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttggcccacaaccactgt 25901105  T
Q  268 actttattagtaatttgaattggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctt 367  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25901106 actttattagtaatttgaattggctcgcctctattttctctgcatttatagataaatgctgcgtcgatttgatcatttgctaatatcaatgcatcacctt 25901205  T
Q  368 tcttagaaaggtacaatggcaagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatcca 467  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25901206 tcttagaaaggtacaatggcaataactccatcgtttcaaatttcaataaatattggcttgaacaaatattctgataactaatttttaacaattgaatcca 25901305  T
Q  468 agactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgtt 567  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25901306 agactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgtt 25901405  T
Q  568 ggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctcaacag 667  Q
    || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  25901406 ggctgaacacgtggcacctcgtcaaaaccccgaggtagcaacaactgagtgtatgactcagtggacagatcaagcgaaacaatcacatattgctcaacag 25901505  T
Q  668 taatcttactaacattatcaaattcatagtcagaatagaagtaattgcgaagtgccaaccagttaatagt 737  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  25901506 taatcttactaacattatcaaattcataatctgaatagaagtaattgtgaagtgccaaccagttaatagt 25901575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25914862 - 25914907
Alignment:
Q  7 tcgaagaatatcaattgaatactacgtaacagcaatgaaattgaag 52  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  25914862 tcgaagaaaatcaattgaatactacgtaacagcaatgaaattgaag 25914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 12734787 - 12734874
Alignment:
Q  438 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 525  Q
    |||| |||||||||| |  |||||||||||||| ||||||||||  || |||  |||  |||||| |||||||||| |||||||||||    
T  12734787 ctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccaacatcatccataaaacaaaatgggttcccttgaaa 12734874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 275; Significance: 1e-153; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 188 - 734
Target Start/End: Original strand, 10571023 - 10571569
Alignment:
Q  188 aagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaat 287  Q
    |||||||||||  |||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||  |||    
T  10571023 aagtaatatgaggaagagaaactcactttcatcgagttggaaccaaactttcaacgtaatccttggcccataaccaccatattttattagtaattctaat 10571122  T
Q  288 tggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatggc 387  Q
    | |||| |||||||| |||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||  ||  | |||||||||||||||||||||    
T  10571123 ttgctcgcctctattgtctctgcaattatagataaatgttgtgtcgttttcatcatttgcaaatatcaatgtttccgcattcttagaaaggtacaatggc 10571222  T
Q  388 aagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaat 487  Q
    || ||||||||||||||||||||||||||| ||| |||||||   ||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||    
T  10571223 aataactccatcgtttcaaatttcaataaatattcgcttgaatggaaattctcataactaattttaaacaactgaatccaagactcttgaactccaaaat 10571322  T
Q  488 ccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttc 587  Q
    |  |||||||||||| ||||| ||| ||||||||||||||||||| ||| |||||  |||  || ||||||||||  ||||| |||||||  | ||| ||    
T  10571323 ctgtcattttccataaaacaagatgacttcccttgaaatcatgacaaaagcaaagacagttgattaaaaccacaagcgttggttgaacacaagacacctc 10571422  T
Q  588 gtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctcaacagtaatcttactaacattatca 687  Q
    ||||||||||||||| |||||||| | ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||  ||||||||||| ||    
T  10571423 gtcaaaaccccgaggaagcaacaattcagtgtatgactcagttgagagatcaagtgaaacaatcacatattgctcaacagtaatactactaacattacca 10571522  T
Q  688 aattcatagtcagaatagaagtaattgcgaagtgccaaccagttaat 734  Q
    | |||||| |||||||||||||||| |||||| | || |||||||||    
T  10571523 atttcataatcagaatagaagtaatcgcgaagggtcatccagttaat 10571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 188 - 734
Target Start/End: Original strand, 10553293 - 10553839
Alignment:
Q  188 aagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaat 287  Q
    |||||||||||  |||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||  |||    
T  10553293 aagtaatatgaggaagagaaactcactttcatcgagttggaaccaaactttcaacgtaatccttggcccataaccaccatattttattagtaattctaat 10553392  T
Q  288 tggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatggc 387  Q
    | |||| |||||||| |||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||  ||  | |||||||||||||||||||||    
T  10553393 ttgctcgcctctattgtctctgcaattatagataaatgttgtgtcgttttcatcatttgcaaatatcaatgtttccgcattcttagaaaggtacaatggc 10553492  T
Q  388 aagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaat 487  Q
    || ||||||||||||||||||||||||||| ||| |||||||   ||||||| ||||||||| || | ||| |||||||||||||||||||||| |||||    
T  10553493 aataactccatcgtttcaaatttcaataaatattcgcttgaatggaaattctcataactaatgttaagcaactgaatccaagactcttgaactccaaaat 10553592  T
Q  488 ccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttc 587  Q
    |  |||||||||||| ||||| ||||||||||||||||||||||| ||| |||||  | |  |||||| ||||||  ||||| |||||||| | ||| |     
T  10553593 ctgtcattttccataaaacaagatggcttcccttgaaatcatgacaaaagcaaagacaattgatcaaacccacaagcgttggctgaacacgagacacctt 10553692  T
Q  588 gtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctcaacagtaatcttactaacattatca 687  Q
    |||||||||||| || |||||||| | ||||||||||||||| || |||||||||||||| ||| |||||||| ||||| |||| || ||||||||| ||    
T  10553693 gtcaaaaccccggggaagcaacaattcagtgtatgactcagttgagagatcaagtgaaacaatcccatattgcgcaacactaatattgctaacattacca 10553792  T
Q  688 aattcatagtcagaatagaagtaattgcgaagtgccaaccagttaat 734  Q
    | |||||| |||||||||||||||| |||||| | ||||||||||||    
T  10553793 atttcataatcagaatagaagtaatcgcgaagggtcaaccagttaat 10553839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 437 - 670
Target Start/End: Complemental strand, 10460699 - 10460466
Alignment:
Q  437 tctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaa 536  Q
    |||||||||||||  | || |||||| |||| ||||| ||||||| ||||| |||||| |  ||||| ||||||||  ||||||| ||||||| |   ||    
T  10460699 tctgataactaataataaataattgagtccatgactcgtgaactccaaaattcttcatctgtcatatcacaaaatgagttcccttaaaatcataagagaa 10460600  T
Q  537 acaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacaga 636  Q
    ||||||  |||||||||||||||||| |||||| |||  ||||||||| || || ||||||||||||| ||||| ||||||||||| ||||| ||| |||    
T  10460599 acaaagacagtccatcaaaaccacaagtgttggctgataacgtggcacctcatcgaaaccccgaggcaacaacagctgagtgtatgtctcagaggagaga 10460500  T
Q  637 tcaagtgaaacgatcacatattgctcaacagtaa 670  Q
    || | |||||| |||||||||| |||||||||||    
T  10460499 tccaatgaaacaatcacatatttctcaacagtaa 10460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 433 - 658
Target Start/End: Original strand, 8443446 - 8443671
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||| | ||| |||||| ||||  ||| ||||||||||| |     
T  8443446 aaattctgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatgagttctcttgaaatcataag 8443545  T
Q  533 caaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtgga 632  Q
     |||||||||  |||||||||||||  ||| |||||| |||  || |||| | |  |||| |||| |||||| || || |||||||| |||||| |||||    
T  8443546 aaaaacaaagacagtccatcaaaactgcaagtgttggctgatgacatggccccttatcaacaccctgaggcaacagcagctgagtgtgtgactcggtgga 8443645  T
Q  633 cagatcaagtgaaacgatcacatatt 658  Q
     |||||||| ||||| ||||||||||    
T  8443646 gagatcaagcgaaactatcacatatt 8443671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 433 - 656
Target Start/End: Complemental strand, 10482259 - 10482036
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    |||||||||||| ||||||| || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||   || |||   |||||||||    
T  10482259 aaattctgataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccatataacaaaataagtttcctcataatcatgac 10482160  T
Q  533 caaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtgga 632  Q
    ||||||||||  | |||||||||||| |||   |||| |||  ||||| ||| |  | |||||||||||| |||||||| |||||||||| |||||| ||    
T  10482159 caaaacaaagacaatccatcaaaaccgcaagctttggttgatgacgtgacaccttattaaaaccccgaggtagcaacaattgagtgtatgtctcagttga 10482060  T
Q  633 cagatcaagtgaaacgatcacata 656  Q
     |||||||||||||  ||||||||    
T  10482059 gagatcaagtgaaagaatcacata 10482036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 441 - 669
Target Start/End: Complemental strand, 6388310 - 6388082
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaa 540  Q
    ||||||||||||||| | ||||||||||||||||||  | | |||||||||||||| |||||||||| ||||  || |||  |||||||||| |||||||    
T  6388310 ataactaatttttaatagttgaatccaagactcttgggcgccaaaatccttcatttgccatataacagaatgagtttcctcaaaatcatgacaaaaacaa 6388211  T
Q  541 agggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaa 640  Q
    ||  || |||||||||| ||||   |||| |||  |||||| || |  |||||| ||||||| ||||| || |||||||||  |||| | || |||||||    
T  6388210 agacagcccatcaaaacaacaagctttggctgataacgtggaaccttatcaaaatcccgaggaagcaaaaattgagtgtatttctcacttgatagatcaa 6388111  T
Q  641 gtgaaacgatcacatattgctcaacagta 669  Q
    ||||||  |||||| |||||| |||||||    
T  6388110 gtgaaagaatcacacattgcttaacagta 6388082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 442 - 671
Target Start/End: Complemental strand, 6392893 - 6392661
Alignment:
Q  442 taactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataa---caaaatggcttcccttgaaatcatgaccaaaac 538  Q
    ||||||||||| || ||||||||||||||||| ||||||| |||||||||||||| |||||| |   |||||||| || |||   | ||| ||| |||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccatatgatgacaaaatgggtttcctcatagtcaagacaaaaac 6392794  T
Q  539 aaagggagtccatcaaaaccacaattgttggatgaacacgtggca-cttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagat 637  Q
    ||||  |||||||||||||||||| | | || |||  || ||||| |||  | |||||   ||||||||||||| | |||||||| ||||||||| |||     
T  6392793 aaagaaagtccatcaaaaccacaagtttcggttgataacatggcaccttattaaaaacattgaggcagcaacaatttagtgtatgtctcagtggagaga- 6392695  T
Q  638 caagtgaaacgatcacatattgctcaacagtaat 671  Q
    | |||||||  |||||||||||||||||||||||    
T  6392694 cgagtgaaagaatcacatattgctcaacagtaat 6392661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 433 - 668
Target Start/End: Original strand, 8447646 - 8447881
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    |||||||||||| ||||||| || ||||||||||||||||| |||||||  ||||||||||| | ||| |||| |  |||  ||| |||||||||||       
T  8447646 aaattctgataattaattttaaataattgaatccaagactcatgaactccgaaatccttcatctgccaaataaaatgatgagttctcttgaaatcatatg 8447745  T
Q  533 caaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtgga 632  Q
     |||||||||  |||||||||||||  ||| ||| ||||||   | |||||| || ||||||||| |||||| ||||| |||||||| |||||| |||||    
T  8447746 aaaaacaaagacagtccatcaaaactgcaagtgtcggatgatgtcatggcacctcatcaaaaccctgaggcaacaacagctgagtgtgtgactcggtgga 8447845  T
Q  633 cagatcaagtgaaacgatcacatattgctcaacagt 668  Q
     | | |||| ||||| |||| |||||  ||||||||    
T  8447846 gatagcaagcgaaacaatcatatattcatcaacagt 8447881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 433 - 666
Target Start/End: Complemental strand, 10493755 - 10493520
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    ||||||| ||||| ||||||  | ||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||| |    | |||||||||||    
T  10493755 aaattcttataaccaattttatataattgaatccaagactcatgatctcgaaaatctttcattttccagattacaaaatgggtattttggaaatcatgac 10493656  T
Q  533 caaaacaaagggagtccatcaaaaccacaattg--ttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtg 630  Q
     |||| ||||  | |||||||| ||||||| ||  ||||  ||  | ||||||  ||  |||||||| |||||| |||||  |||||||||| |||||||    
T  10493655 aaaaagaaagacaatccatcaagaccacaagtgttttgggcgataatgtggcagatcaacaaaaccctgaggcaacaacagttgagtgtatgtctcagtg 10493556  T
Q  631 gacagatcaagtgaaacgatcacatattgctcaaca 666  Q
    || ||||| | |||||  ||||||||||||||||||    
T  10493555 gaaagatcgactgaaagaatcacatattgctcaaca 10493520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 433 - 656
Target Start/End: Complemental strand, 10468120 - 10467898
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    ||||||| |||| ||||||| || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||   || |||   |||||||||    
T  10468120 aaattcttataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccatataacaaaataagtttcctcataatcatgac 10468021  T
Q  533 caaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtgga 632  Q
    | ||||||||  | |||||||||||| ||    |||| |||  ||||| ||| |  | |||||| ||||| |||||||| |||||||||| |||||| ||    
T  10468020 cgaaacaaagacaatccatcaaaaccgcaggctttggctgatgacgtgacaccttat-aaaacctcgaggtagcaacaattgagtgtatgtctcagttga 10467922  T
Q  633 cagatcaagtgaaacgatcacata 656  Q
     |||||||||||||  ||||||||    
T  10467921 gagatcaagtgaaagaatcacata 10467898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 433 - 671
Target Start/End: Complemental strand, 10464347 - 10464106
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 532  Q
    ||||||| ||||| || |||  ||||||||||||||||||| ||| | | |||||||||||||| |||||||||||||||| |    | |||||||| ||    
T  10464347 aaattcttataaccaactttatacaattgaatccaagactcctgatccccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataac 10464248  T
Q  533 caaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggca---cttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagt 629  Q
     |||||||||  | ||||||||||||||||   |||| |||  |  |||||   | || ||||||||||||||||||||||  |||||||| | ||||||    
T  10464247 aaaaacaaagacaatccatcaaaaccacaagccttggctgataatctggcacctcatcatcaaaaccccgaggcagcaacagttgagtgtacgtctcagt 10464148  T
Q  630 ggacagatcaagtgaaacgatcacatattgctcaacagtaat 671  Q
    ||| ||||  | |||||  |||||||||| ||| | ||||||    
T  10464147 ggaaagattgattgaaagaatcacatatttctccatagtaat 10464106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 837854 - 837774
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||||    
T  837854 aaattatgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatgg 837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 326
Target Start/End: Complemental strand, 10464630 - 10464472
Alignment:
Q  168 gaagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgt 267  Q
    ||||||| |||||||||| |||||||||||   ||||||||||||||||||||  || ||||| | |||||||||||||||||| ||   ||||||   |    
T  10464630 gaagtaatataaattctaacaagtaatatgtggaagagaaactcactttcaacgtgtcgaaactagactttcaacgtaatccttggcatgcaaccataat 10464531  T
Q  268 actttattagtaatttgaattggctcacctctattttctctgcatttatagataaatgc 326  Q
    ||  || ||||||||  |||| ||||  ||||||| ||| ||| |||||||||||||||    
T  10464530 acagtactagtaattccaattcgctctactctattgtctttgcctttatagataaatgc 10464472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 435 - 512
Target Start/End: Complemental strand, 53774916 - 53774839
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 512  Q
    |||||||||||||||||| |  |||||| |||||||||||| ||||| ||| |||||||||| |||||||||||||||    
T  53774916 attctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatg 53774839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 10482528 - 10482452
Alignment:
Q  173 aacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcc 249  Q
    ||||||||||| | |||||||||||   |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  10482528 aacataaattcaaacaagtaatatgtggaagagaaactcactttcaatgagtcgaaaccaaactttcaacgtaatcc 10482452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 6372515 - 6372443
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    ||||||||||||  | ||||||||| ||||||||||||||| | |||||||||||| |||||||| |||||||    
T  6372515 ataactaattttatataattgaatctaagactcttgaactccagaatccttcatttgccatataataaaatgg 6372443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 829589 - 829652
Alignment:
Q  433 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 496  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||| | ||||||||||||||    
T  829589 aaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcattt 829652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 10475557 - 10475482
Alignment:
Q  176 ataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 251  Q
    |||||||| | |||||||||||   ||||||||||||||||||||  || ||||| ||||||||||||||||||||    
T  10475557 ataaattcaaacaagtaatatgtggaagagaaactcactttcaacgtgtcgaaactaaactttcaacgtaatcctt 10475482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 658
Target Start/End: Complemental strand, 10475260 - 10475057
Alignment:
Q  455 acaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 554  Q
    ||||||||||||||||||| |   ||| |||||||||||||| |||||||||||||||| |    | |||||||| || |||||||||  | ||||||||    
T  10475260 acaattgaatccaagactcct---ctccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatccatcaa 10475164  T
Q  555 aaccacaattgttggatgaacacgtggca---cttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatc 651  Q
    ||||||||   |||| |||  |  |||||   | || ||||||||||||||||||||||   ||||| | | ||||||||| ||||  |||||||  |||    
T  10475163 aaccacaagccttggctgataatttggcacctcatcatcaaaaccccgaggcagcaacagtcgagtgaacgtctcagtggaaagattgagtgaaagaatc 10475064  T
Q  652 acatatt 658  Q
    |||||||    
T  10475063 acatatt 10475057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 829343 - 829425
Alignment:
Q  171 gtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagc 254  Q
    ||||||||||||| | ||||| |||||  |||||||||||||||||||   | | |||||||||||||||| ||||||||||||    
T  829343 gtaacataaattcaaacaagtcatatgtgaaagagaaactcactttcatagaatcgaaaccaaactttcaa-gtaatccttagc 829425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 10468375 - 10468313
Alignment:
Q  187 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcc 249  Q
    |||||||||||   |||||||||||||||||||  |||  |||||||||||||||||||||||    
T  10468375 caagtaatatgtggaagagaaactcactttcaatgagtcaaaaccaaactttcaacgtaatcc 10468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 8437025 - 8437102
Alignment:
Q  169 aagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaa 246  Q
    |||||||| |||||| |  ||||||||||   || |||||||||| |||||| ||| |||||||||||||||||||||    
T  8437025 aagtaacaaaaattcaaaaaagtaatatgtggaatagaaactcacattcaacgagtcgaaaccaaactttcaacgtaa 8437102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 8447379 - 8447456
Alignment:
Q  169 aagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaa 246  Q
    |||||||| |||||  | |||||||||||   || |||||||||| |||||| ||| |||||||||||||||||||||    
T  8447379 aagtaacaaaaattaaaacaagtaatatgtggaatagaaactcacattcaacgagtcgaaaccaaactttcaacgtaa 8447456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 512
Target Start/End: Original strand, 11970980 - 11971053
Alignment:
Q  439 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 512  Q
    |||||||||||| | |  |||||| ||||||||||||  |||| ||| |||||||||| |||||||||||||||    
T  11970980 tgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaatg 11971053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 838057 - 838005
Alignment:
Q  203 gagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcc 255  Q
    |||||||||| ||||||  | |||||||||||||||||| |||||||||||||    
T  838057 gagaaactcattttcaatgaattgaaaccaaactttcaaagtaatccttagcc 838005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 661
Target Start/End: Original strand, 829721 - 829792
Alignment:
Q  590 caaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgct 661  Q
    ||||| || |||||||| |||| | |||||||| ||||||||| |||||||||||||  ||| |||||||||    
T  829721 caaaaacctgaggcagccacaatttagtgtatgtctcagtggaaagatcaagtgaaagaatcgcatattgct 829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 10484779 - 10484704
Alignment:
Q  176 ataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 251  Q
    |||||||| | |||||||||||   |||||| |||||||||||||  || ||||| | ||||||||||||||||||    
T  10484779 ataaattcaaacaagtaatatgtggaagagacactcactttcaacgtgtcgaaactagactttcaacgtaatcctt 10484704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 670
Target Start/End: Original strand, 1110987 - 1111032
Alignment:
Q  625 tcagtggacagatcaagtgaaacgatcacatattgctcaacagtaa 670  Q
    |||||||| |||||||||||||| ||||||| ||||||||| ||||    
T  1110987 tcagtggaaagatcaagtgaaacaatcacatgttgctcaacggtaa 1111032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 35767070 - 35767017
Alignment:
Q  459 ttgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 512  Q
    ||||||||||||||||| ||||| ||| || | ||| |||||||||||||||||    
T  35767070 ttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatg 35767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 441 - 646
Target Start/End: Original strand, 50645485 - 50645690
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaa 540  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||  ||||||  |||||||||  || ||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaatgagttccctcaaaatcatgaaaaatacaa 50645584  T
Q  541 agggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaa 640  Q
    ||   |||| | ||||||  || |||||| |||  |||||| |  | || ||||||||||||||||||||  |||||||||| ||| ||||| |||||||    
T  50645585 agattgtcccttaaaaccttaagtgttggctgataacgtggaagcttgtgaaaaccccgaggcagcaacagttgagtgtatgtctcggtggagagatcaa 50645684  T
Q  641 gtgaaa 646  Q
    ||||||    
T  50645685 gtgaaa 50645690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 4570997 - 4570927
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 511  Q
    |||||||||||| | ||||||| ||||||| |||| ||| | ||| | |||||||| ||||||||||||||    
T  4570997 ataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaat 4570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 671
Target Start/End: Original strand, 4366632 - 4366725
Alignment:
Q  578 gtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctcaacagtaat 671  Q
    |||||||||| |||||||| |||||||||||  | ||| |||||| ||| ||   ||||||||| ||||| || ||| |||||||||| |||||    
T  4366632 gtggcacttcttcaaaaccacgaggcagcaagtattgattgtatgtctctgtacccagatcaagcgaaacaataacaaattgctcaacggtaat 4366725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 9e-32; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 440 - 562
Target Start/End: Complemental strand, 25377145 - 25377023
Alignment:
Q  440 gataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaaca 539  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| || |||  |||||||||| ||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaatggttttcctccaaatcatgacaaaaaca 25377046  T
Q  540 aagggagtccatcaaaaccacaa 562  Q
    |||  ||||| ||||||||||||    
T  25377045 aagacagtccgtcaaaaccacaa 25377023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 443 - 525
Target Start/End: Original strand, 18913559 - 18913641
Alignment:
Q  443 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 525  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| |||||||||||||||||| ||||| |||||    
T  18913559 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggttcccctgaaa 18913641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 522
Target Start/End: Complemental strand, 20975630 - 20975547
Alignment:
Q  439 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttg 522  Q
    ||||| |||| ||| ||||||||||||||||| |||| ||||| ||| ||| |||||| |||||||||||||||  ||||||||    
T  20975630 tgatacctaaatttaaacaattgaatccaagaatcttcaactccaaattccctcatttgccatataacaaaatgatttcccttg 20975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 513
Target Start/End: Original strand, 18908811 - 18908881
Alignment:
Q  443 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  18908811 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 513
Target Start/End: Original strand, 18920767 - 18920837
Alignment:
Q  443 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  18920767 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18920837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 14514970 - 14514882
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 529  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| || | ||||||||||||||||| |||| ||  |||||||||||    
T  14514970 ataactaattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaagatgggttttcttgaaatcat 14514882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 542
Target Start/End: Complemental strand, 20980651 - 20980573
Alignment:
Q  464 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 542  Q
    |||||||||||| ||||| ||| ||  |||||||||||||||||||||   |||| ||| ||| ||||| |||||||||    
T  20980651 tccaagactcttcaactctaaattctgtcattttccatataacaaaatcatttccgttggaataatgacaaaaacaaag 20980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 457 - 666
Target Start/End: Complemental strand, 26256829 - 26256620
Alignment:
Q  457 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaa 556  Q
    |||||| |||||||||||||||||| | | |||||||| | ||||| ||||||||   || |||||  |||||||  |||||||||| | ||||||||||    
T  26256829 aattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaatcattttccttggtatcatgagaaaaacaaaggcattccatcaaaa 26256730  T
Q  557 ccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacata 656  Q
    ||  ||    ||| ||||||  |||||| || ||||||||  ||||||||||||||||  |||||| ||| || || |||||||| ||||  |||||| |    
T  26256729 ccttaagaactggctgaacaaatggcacctcatcaaaaccttgaggcagcaacaactgcttgtatgtctccgttgaaagatcaagcgaaataatcacaaa 26256630  T
Q  657 ttgctcaaca 666  Q
    ||||||||||    
T  26256629 ttgctcaaca 26256620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 22063718 - 22063611
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    |||||||||||||||||| || || ||| ||||||||||||||| || ||| |||||||||| |||||||||||||||  ||   ||||||||||||  |    
T  22063718 attctgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaatgagtttgtttgaaatcatgaaaa 22063619  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  22063618 aaacaaag 22063611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 22100569 - 22100462
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    |||||||||||||||||| || || ||| |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  22100569 attctgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaa 22100470  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  22100469 aaacaaag 22100462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 526
Target Start/End: Complemental strand, 19357983 - 19357895
Alignment:
Q  438 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaat 526  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| ||| ||| |||| ||||||| ||| |||||| | || |||||||    
T  19357983 ctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccataaaacgaaatgggtccctttgaaat 19357895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 510
Target Start/End: Original strand, 660845 - 660916
Alignment:
Q  439 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaa 510  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||    
T  660845 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 660916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 22070187 - 22070080
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    ||||| |||||||||||| || ||  || |||||||||||||||||| ||| | |||||||| |||||||| ||||||  |||  ||||||||||||  |    
T  22070187 attcttataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagttcgtttgaaatcatgagaa 22070088  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  22070087 aaacaaag 22070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 22080944 - 22080837
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    |||||||||||||||||| || ||  || |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  22080944 attctgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagtttgtttgaaatcatgagaa 22080845  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  22080844 aaacaaag 22080837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 523
Target Start/End: Complemental strand, 22028682 - 22028616
Alignment:
Q  457 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttga 523  Q
    |||||| |||||||||||| ||||| | ||||| ||||||||||||||||||||||| || ||||||    
T  22028682 aattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatgggtttccttga 22028616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 512
Target Start/End: Complemental strand, 14076754 - 14076677
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 512  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||| |||||    
T  14076754 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 435 - 512
Target Start/End: Complemental strand, 14386782 - 14386705
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 512  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||| |||||    
T  14386782 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14386705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 15571911 - 15571996
Alignment:
Q  457 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 542  Q
    ||||||| ||||||||||| ||||| ||| ||| |||||| ||| || ||||||||| ||||||||||||||| |  |||||||||    
T  15571911 aattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttcccttgaaatcataagaaaaacaaag 15571996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 461 - 602
Target Start/End: Original strand, 19637237 - 19637378
Alignment:
Q  461 gaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccac 560  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||| |||||   |||| || |||||||||   || ||||||||||||| ||| || ||    
T  19637237 gaatccacgactcttgaactccaaattccttcatttgccatataataaaatcagttccattaaaatcatgagacaagcaaagggagtccagcaacacaac 19637336  T
Q  561 aattgttggatgaacacgtggcacttcgtcaaaaccccgagg 602  Q
    ||  ||||| ||||||| ||  ||||  |||||||| |||||    
T  19637337 aagagttggttgaacacatgaaactttatcaaaacctcgagg 19637378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 529
Target Start/End: Original strand, 1985955 - 1986043
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 529  Q
    |||||||||||| ||||||||| ||||||| |||| ||| | ||| |||||||||| ||| | |||||||||| ||  |||||||||||    
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatgggttttcttgaaatcat 1986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 615
Target Start/End: Original strand, 19597737 - 19597828
Alignment:
Q  523 aaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactga 615  Q
    |||||||||| |||||||||||| ||||||||||| ||||  |||||  ||||| ||||||| |  ||||||||||||||  |||||||||||    
T  19597737 aaatcatgacaaaaacaaagggaatccatcaaaacaacaagagttgg-cgaacaggtggcacattatcaaaaccccgagggggcaacaactga 19597828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 19645452 - 19645499
Alignment:
Q  204 agaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 251  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  19645452 agaaacttactttcaacaagttgaaaccaaactttcaacataatcctt 19645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 16846480 - 16846577
Alignment:
Q  457 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 554  Q
    |||||| |||||||||||||||||| | ||||  |||| ||||||||||||| |||  ||  ||||| | |||||  |||||||||| ||||||||||    
T  16846480 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaagatgagtttgcttgacaacatgagaaaaacaaaggcagtccatcaa 16846577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 529
Target Start/End: Original strand, 20058057 - 20058145
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 529  Q
    |||||||||||| |  ||||||  ||||||||||| |||||  || |||| ||||||||||||||||||||| |||  ||| |||||||    
T  20058057 ataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaatgactttgcttaaaatcat 20058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 9807872 - 9807793
Alignment:
Q  463 atccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 542  Q
    ||||||||||||| ||||| ||| |||||||| | ||||||||| |||| | ||  ||| |||||||||| |||||||||    
T  9807872 atccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttcttcaaatcatgacaaaaacaaag 9807793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 509
Target Start/End: Complemental strand, 24031307 - 24031257
Alignment:
Q  459 ttgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 509  Q
    |||| |||||||||||||||||| ||| || |||||||||||||| |||||    
T  24031307 ttgagtccaagactcttgaactccaaactcattcattttccatatgacaaa 24031257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 16839397 - 16839494
Alignment:
Q  457 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 554  Q
    |||||| |||||||||||||||||| | ||||  |||| ||||||||||||| |||  ||  ||| | | |||||  |||||||||| ||||||||||    
T  16839397 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaagatgagttttcttaacaacatgagaaaaacaaaggcagtccatcaa 16839494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 509
Target Start/End: Original strand, 23999478 - 23999523
Alignment:
Q  464 tccaagactcttgaactcgaaaatccttcattttccatataacaaa 509  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||||    
T  23999478 tccacgacttttgaactccaaactccttcattttccatataacaaa 23999523  T

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Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 311
Target Start/End: Complemental strand, 37935426 - 37935285
Alignment:
Q  170 agtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtac 269  Q
    |||||||| ||||||| ||||||||||||  |||||| |||||||||||   ||| | |||||||||||||||||||||||| |||| |||||||| |      
T  37935426 agtaacatgaattctagcaagtaatatgaggaagagagactcactttcattgagtcggaaccaaactttcaacgtaatcctttgcccgcaaccaccatgt 37935327  T
Q  270 tttattagtaatttgaattggctcacctctattttctctgca 311  Q
    | |||||||||||  ||||  ||||| | |||| ||||||||    
T  37935326 tctattagtaattctaattttctcacatttattctctctgca 37935285  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 509
Target Start/End: Complemental strand, 23086839 - 23086784
Alignment:
Q  454 aacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 509  Q
    ||||| ||| |||||||||||||||||| ||| |||||||| | ||||||||||||    
T  23086839 aacaactgagtccaagactcttgaactccaaactccttcatctgccatataacaaa 23086784  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 18964824 - 18964894
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataa 505  Q
    ||||||||||| |||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||    
T  18964824 attctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 18964894  T

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Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 666
Target Start/End: Original strand, 19746717 - 19746919
Alignment:
Q  464 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaat 563  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||| |   ||||||||||||| ||   ||| |||||| ||||||||| |||   ||     
T  19746717 tccaagactcttgaactccaaacttcttcatttgccatataacaaattcagttcccttgaaatcgtgcgaaaagcaaaggcagtccatcagaacatgaag 19746816  T
Q  564 tgttggatgaacacgtggcacttcgtcaaaaccccgaggcagcaacaactgagtgtatgactcagtggacagatcaagtgaaacgatcacatattgctca 663  Q
     ||||| ||||   |||| ||||| ||||||||    |||||||| || || ||||||| |||||| || |||||||| ||||| |||||| ||||||||    
T  19746817 agttggctgaaagtgtgggacttcatcaaaaccaaatggcagcaaaaattgtgtgtatgtctcagtcgaaagatcaagggaaacaatcacaaattgctca 19746916  T
Q  664 aca 666  Q
    |||    
T  19746917 aca 19746919  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 511
Target Start/End: Complemental strand, 20770722 - 20770650
Alignment:
Q  439 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 511  Q
    |||||||||||||| |  ||||||||||| ||||||| || || ||| |||||||||| ||||||||||||||    
T  20770722 tgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaat 20770650  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 513
Target Start/End: Original strand, 6954521 - 6954591
Alignment:
Q  443 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    |||||||||| | ||||||| ||||||| |||| ||||| ||| |||||||||| ||| ||||||||||||    
T  6954521 aactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatgg 6954591  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 554
Target Start/End: Original strand, 6947880 - 6947993
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaa 540  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||| | |||||| ||| ||  ||||||||||||   |||||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaa 6947979  T
Q  541 agggagtccatcaa 554  Q
    ||| | ||||||||    
T  6947980 aggcaatccatcaa 6947993  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 33576217 - 33576128
Alignment:
Q  464 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatca 553  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||| |   ||||||| ||||| ||   |||||||||| |||||||||    
T  33576217 tccaagactcttgaactccaaactccttcatcatccatataacaaattcagttcccttaaaatcgtgcgaaaaacaaaggcagtccatca 33576128  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 513
Target Start/End: Original strand, 6921350 - 6921422
Alignment:
Q  441 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 513  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||| ||||||||||||    
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatgg 6921422  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 496
Target Start/End: Complemental strand, 17369740 - 17369679
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 496  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| ||||||||||    
T  17369740 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcattt 17369679  T

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Target: scaffold0867 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 542
Target Start/End: Original strand, 4663 - 4770
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    |||||||||||||||||| || || ||| |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  4663 attctgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaa 4762  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  4763 aaacaaag 4770  T

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Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 8134 - 8047
Alignment:
Q  438 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 525  Q
    |||| |||||||||| |  |||||||||||||| ||||||||||  || ||| ||||  |||||| |||||||||| |||||||||||    
T  8134 ctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccatcatcatccataaaacaaaatgggttcccttgaaa 8047  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 435 - 542
Target Start/End: Complemental strand, 27618567 - 27618460
Alignment:
Q  435 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 534  Q
    |||||||||||||| ||| | ||| ||| |||||||||||| |||||  |  || | |||||||||||||||||||||  ||  ||| |||||||||| |    
T  27618567 attctgataactaactttaagcaactgagtccaagactcttcaactccgagttcttccattttccatataacaaaatgagtttgcttaaaatcatgacaa 27618468  T
Q  535 aaacaaag 542  Q
    ||||||||    
T  27618467 aaacaaag 27618460  T

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