View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18622_high_12 (Length: 245)
Name: NF18622_high_12
Description: NF18622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18622_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 8075084 - 8075303
Alignment:
| Q |
5 |
ttaaagaaaggaaaatgcatttcagtagctagtgtaatctatgtatagaatttaaaaagtatgcattttccaaccgtgttaaatgtgttaaaaataataa |
104 |
Q |
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| T |
8075084 |
ttaaagaaaggaaaatgcatttcagtagctagtgtaatctatgtatagaatttaaaaagtatgcattttccaaccgtgttaaaagtgttaaaaataataa |
8075183 |
T |
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| Q |
105 |
agtagatctttaacgtgtaatatttatgaagacaaaatatagcaaagacgttgtatagtagcaaagatacaatgtgattcttaccaaaagtagtataaaa |
204 |
Q |
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| T |
8075184 |
agtagatctttaacgtgtaatatttatgaagacaaaatatagcaaagacgttgtatagtagcaaagatacaatgtgatccttgccaaaagtagtataaaa |
8075283 |
T |
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| Q |
205 |
ggtacaatttacacacacag |
224 |
Q |
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| T |
8075284 |
ggtacaatttacacacacag |
8075303 |
T |
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