View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18623_high_33 (Length: 218)
Name: NF18623_high_33
Description: NF18623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18623_high_33 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 32207352 - 32207169
Alignment:
| Q |
21 |
ccttaactacaccaaaactatattgcaacttgtactacaaaaatatttctcacataacacctttgcctctcttacttcatatatagctttcttcattttc |
120 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32207352 |
ccttaactacaccaaaactatattgcaacttgtactacaaaaatatttctcacataacacctttgcctctcttacttcatatatagctttcttcattttc |
32207253 |
T |
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| Q |
121 |
ttcttcatcattaaatcattaacacgcatgttctcatagtcatattcatctccctaagagagtttcatttttattgtttatttt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32207252 |
ttcttcatcattaaatcattaacacgcatgttctcataatcatattcatctcccttagagagtttcatttttattgtttatttt |
32207169 |
T |
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