View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18623_high_5 (Length: 494)

Name: NF18623_high_5
Description: NF18623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18623_high_5
NF18623_high_5
[»] chr7 (31 HSPs)
chr7 (194-476)||(4903050-4903333)
chr7 (201-465)||(4906435-4906699)
chr7 (288-463)||(4923921-4924099)
chr7 (292-465)||(5822941-5823114)
chr7 (303-472)||(4929247-4929419)
chr7 (1-74)||(19590525-19590598)
chr7 (1-77)||(19590997-19591073)
chr7 (1-77)||(38859113-38859189)
chr7 (1-76)||(35289373-35289448)
chr7 (1-74)||(35288903-35288976)
chr7 (1-76)||(2658837-2658912)
chr7 (1-76)||(19830418-19830493)
chr7 (1-76)||(32004612-32004687)
chr7 (1-75)||(37786766-37786840)
chr7 (1-77)||(2659312-2659388)
chr7 (4-76)||(34533789-34533861)
chr7 (1-77)||(37787239-37787315)
chr7 (1-75)||(19830891-19830965)
chr7 (1-75)||(38858642-38858716)
chr7 (4-76)||(4478175-4478247)
chr7 (1-77)||(38160948-38161024)
chr7 (1-76)||(34534263-34534338)
chr7 (1-71)||(29100323-29100393)
chr7 (1-77)||(23952727-23952804)
chr7 (1-74)||(32005086-32005159)
chr7 (1-73)||(28584394-28584466)
chr7 (1-61)||(29099863-29099923)
chr7 (1-71)||(4641443-4641513)
chr7 (7-76)||(28583437-28583506)
chr7 (1-71)||(4641916-4641983)
chr7 (1-68)||(23953201-23953268)
[»] chr2 (37 HSPs)
chr2 (75-196)||(16194936-16195057)
chr2 (1-77)||(18451303-18451379)
chr2 (1-77)||(20440503-20440579)
chr2 (1-77)||(26538551-26538627)
chr2 (1-76)||(11090992-11091067)
chr2 (1-76)||(22374318-22374393)
chr2 (1-75)||(18450829-18450903)
chr2 (1-75)||(20444748-20444822)
chr2 (1-75)||(40027139-40027213)
chr2 (1-74)||(28616613-28616686)
chr2 (1-77)||(239350-239425)
chr2 (1-77)||(43058804-43058880)
chr2 (1-76)||(1978106-1978181)
chr2 (1-76)||(1978581-1978656)
chr2 (1-76)||(11090519-11090594)
chr2 (1-76)||(22374797-22374872)
chr2 (1-75)||(26538096-26538170)
chr2 (1-75)||(28617086-28617160)
chr2 (1-71)||(40027612-40027682)
chr2 (1-73)||(239824-239896)
chr2 (1-81)||(40815338-40815418)
chr2 (1-77)||(40815817-40815893)
chr2 (1-77)||(3025463-3025539)
chr2 (1-77)||(7446818-7446894)
chr2 (1-73)||(35781135-35781207)
chr2 (1-76)||(28847167-28847242)
chr2 (1-75)||(7446341-7446415)
chr2 (1-74)||(35779708-35779781)
chr2 (1-74)||(43058333-43058406)
chr2 (9-71)||(14432145-14432207)
chr2 (4-77)||(14432616-14432689)
chr2 (1-72)||(8972239-8972310)
chr2 (1-71)||(8425358-8425428)
chr2 (1-71)||(8425832-8425902)
chr2 (7-74)||(3025940-3026006)
chr2 (1-72)||(15551501-15551572)
chr2 (1-72)||(15552526-15552596)
[»] chr4 (50 HSPs)
chr4 (1-76)||(25447708-25447783)
chr4 (1-77)||(23494915-23494991)
chr4 (1-76)||(15523233-15523308)
chr4 (1-77)||(12234326-12234402)
chr4 (1-74)||(11153619-11153692)
chr4 (1-74)||(22434179-22434252)
chr4 (1-74)||(25447247-25447320)
chr4 (1-74)||(46193405-46193478)
chr4 (1-77)||(25937667-25937743)
chr4 (1-80)||(20470983-20471062)
chr4 (1-72)||(46193877-46193948)
chr4 (1-75)||(15523706-15523780)
chr4 (1-75)||(25938143-25938217)
chr4 (1-74)||(45082896-45082969)
chr4 (1-77)||(4220031-4220107)
chr4 (1-77)||(18763992-18764068)
chr4 (4-75)||(16318251-16318322)
chr4 (1-72)||(23494445-23494516)
chr4 (1-72)||(38962291-38962362)
chr4 (1-76)||(51021267-51021342)
chr4 (1-74)||(12234801-12234874)
chr4 (1-73)||(20958331-20958403)
chr4 (1-77)||(51020794-51020870)
chr4 (1-72)||(2118295-2118366)
chr4 (1-72)||(33109686-33109757)
chr4 (1-76)||(33109936-33110011)
chr4 (1-76)||(54995067-54995142)
chr4 (1-76)||(54995539-54995614)
chr4 (5-75)||(10258363-10258433)
chr4 (1-71)||(18751602-18751672)
chr4 (1-71)||(48526653-48526723)
chr4 (1-77)||(22434649-22434724)
chr4 (1-73)||(44890518-44890590)
chr4 (9-72)||(4219559-4219622)
chr4 (1-71)||(2118767-2118837)
chr4 (1-75)||(48526195-48526269)
chr4 (9-74)||(35363081-35363146)
chr4 (4-75)||(11153145-11153216)
chr4 (1-76)||(48708293-48708368)
chr4 (1-73)||(44892620-44892692)
chr4 (1-52)||(43243752-43243803)
chr4 (1-76)||(48293592-48293667)
chr4 (1-75)||(22170409-22170482)
chr4 (1-77)||(45082429-45082504)
chr4 (1-52)||(43281262-43281313)
chr4 (1-74)||(48295015-48295088)
chr4 (1-76)||(48713818-48713893)
chr4 (1-74)||(55189528-55189601)
chr4 (1-57)||(12503453-12503509)
chr4 (18-74)||(16691560-16691616)
[»] chr6 (34 HSPs)
chr6 (1-77)||(12935154-12935230)
chr6 (1-77)||(22219825-22219901)
chr6 (1-76)||(20741098-20741173)
chr6 (1-77)||(11445459-11445535)
chr6 (1-76)||(1149463-1149538)
chr6 (1-76)||(18257135-18257210)
chr6 (1-76)||(23075600-23075675)
chr6 (1-71)||(10899942-10900012)
chr6 (1-75)||(23073998-23074072)
chr6 (1-74)||(11277054-11277127)
chr6 (1-77)||(2319669-2319745)
chr6 (1-71)||(18504922-18504992)
chr6 (1-75)||(20741576-20741650)
chr6 (1-74)||(10900402-10900475)
chr6 (4-77)||(11444984-11445057)
chr6 (1-74)||(18257609-18257682)
chr6 (1-77)||(28472634-28472710)
chr6 (1-77)||(29859823-29859899)
chr6 (1-76)||(12935629-12935704)
chr6 (1-75)||(15828113-15828187)
chr6 (1-75)||(31470314-31470388)
chr6 (1-73)||(31470788-31470860)
chr6 (1-72)||(29033436-29033507)
chr6 (1-71)||(2322690-2322760)
chr6 (1-74)||(1149904-1149977)
chr6 (1-73)||(15827639-15827711)
chr6 (1-73)||(18505391-18505463)
chr6 (1-72)||(29035109-29035180)
chr6 (1-71)||(3835198-3835268)
chr6 (4-74)||(4811372-4811442)
chr6 (1-75)||(11276589-11276663)
chr6 (1-74)||(4811728-4811801)
chr6 (18-74)||(22534214-22534270)
chr6 (1-77)||(18296142-18296218)
[»] chr5 (39 HSPs)
chr5 (1-77)||(18183441-18183517)
chr5 (1-76)||(2865227-2865302)
chr5 (1-76)||(19359608-19359683)
chr5 (1-74)||(5819401-5819474)
chr5 (1-77)||(8647910-8647986)
chr5 (1-77)||(15372345-15372421)
chr5 (1-76)||(5818927-5819002)
chr5 (1-74)||(8647438-8647511)
chr5 (1-77)||(24331556-24331632)
chr5 (4-76)||(24362311-24362383)
chr5 (1-76)||(8460928-8461003)
chr5 (1-76)||(18182968-18183043)
chr5 (1-75)||(8461403-8461477)
chr5 (1-75)||(16018588-16018662)
chr5 (1-75)||(29455214-29455288)
chr5 (1-78)||(14215715-14215792)
chr5 (1-74)||(19359136-19359209)
chr5 (1-77)||(15708968-15709044)
chr5 (1-74)||(164191-164264)
chr5 (1-75)||(25000561-25000635)
chr5 (1-75)||(29454739-29454813)
chr5 (1-74)||(7349489-7349562)
chr5 (1-73)||(4222194-4222266)
chr5 (1-72)||(14215243-14215314)
chr5 (1-74)||(4623148-4623221)
chr5 (1-72)||(2864756-2864827)
chr5 (1-74)||(4219663-4219736)
chr5 (1-74)||(7348559-7348632)
chr5 (1-74)||(15709441-15709513)
chr5 (1-77)||(164663-164739)
chr5 (1-73)||(6018315-6018387)
chr5 (4-76)||(16019062-16019134)
chr5 (1-76)||(14463992-14464067)
chr5 (1-72)||(15371873-15371943)
chr5 (1-68)||(24325218-24325285)
chr5 (1-68)||(24361843-24361910)
chr5 (1-72)||(24332034-24332107)
chr5 (1-68)||(6019243-6019309)
chr5 (4-52)||(25000112-25000160)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-80)||(2139-2218)
scaffold0951 (1-76)||(1665-1740)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-76)||(4679-4754)
scaffold0273 (1-35)||(4242-4276)
[»] chr8 (27 HSPs)
chr8 (1-76)||(41681132-41681207)
chr8 (1-77)||(19176287-19176363)
chr8 (1-77)||(19176762-19176838)
chr8 (1-75)||(13225111-13225185)
chr8 (1-82)||(12571855-12571936)
chr8 (1-74)||(41681606-41681679)
chr8 (1-77)||(11656452-11656528)
chr8 (1-73)||(31133692-31133764)
chr8 (1-77)||(33742919-33742995)
chr8 (1-77)||(34541020-34541096)
chr8 (1-75)||(9930129-9930203)
chr8 (1-75)||(11656929-11657003)
chr8 (1-75)||(44831246-44831320)
chr8 (1-83)||(44831717-44831799)
chr8 (1-70)||(13224645-13224713)
chr8 (4-76)||(11336997-11337069)
chr8 (1-81)||(31133213-31133293)
chr8 (1-71)||(9928912-9928982)
chr8 (1-71)||(33328161-33328231)
chr8 (1-74)||(9178107-9178180)
chr8 (1-76)||(4629795-4629870)
chr8 (1-75)||(8074023-8074097)
chr8 (1-71)||(12572323-12572393)
chr8 (4-71)||(4630261-4630328)
chr8 (1-72)||(33328612-33328683)
chr8 (41-76)||(9177665-9177700)
chr8 (29-77)||(43958206-43958254)
[»] chr3 (51 HSPs)
chr3 (1-76)||(31779124-31779199)
chr3 (1-74)||(32535435-32535508)
chr3 (1-74)||(39556049-39556122)
chr3 (1-77)||(17464488-17464564)
chr3 (1-77)||(43973912-43973988)
chr3 (1-75)||(39555577-39555651)
chr3 (1-78)||(20840556-20840633)
chr3 (1-77)||(29801888-29801964)
chr3 (1-77)||(48452986-48453062)
chr3 (1-73)||(51473429-51473501)
chr3 (1-76)||(4275836-4275911)
chr3 (1-75)||(20841033-20841107)
chr3 (1-75)||(31778652-31778726)
chr3 (1-74)||(29801356-29801429)
chr3 (1-74)||(37727402-37727475)
chr3 (1-77)||(5137453-5137529)
chr3 (1-77)||(24301028-24301104)
chr3 (1-75)||(23644461-23644535)
chr3 (1-75)||(27393660-27393734)
chr3 (1-75)||(27394049-27394123)
chr3 (1-75)||(30098235-30098309)
chr3 (7-77)||(30104479-30104549)
chr3 (1-71)||(41046703-41046773)
chr3 (1-74)||(23644937-23645010)
chr3 (1-74)||(25853234-25853307)
chr3 (1-76)||(5136978-5137053)
chr3 (1-76)||(37222043-37222118)
chr3 (1-71)||(25612449-25612519)
chr3 (1-71)||(32534962-32535032)
chr3 (1-77)||(26837828-26837903)
chr3 (4-71)||(24300560-24300626)
chr3 (1-75)||(37726928-37727002)
chr3 (1-70)||(22425285-22425354)
chr3 (1-74)||(43973441-43973514)
chr3 (1-77)||(22424811-22424887)
chr3 (1-77)||(51474806-51474882)
chr3 (8-74)||(23228486-23228552)
chr3 (1-71)||(26274570-26274640)
chr3 (1-73)||(25419145-25419217)
chr3 (1-72)||(25853699-25853770)
chr3 (4-71)||(41047173-41047239)
chr3 (1-76)||(45965936-45966011)
chr3 (1-75)||(17464964-17465038)
chr3 (4-77)||(26275041-26275114)
chr3 (7-76)||(26837358-26837427)
chr3 (1-74)||(50116881-50116954)
chr3 (1-73)||(32697172-32697244)
chr3 (4-76)||(37220555-37220627)
chr3 (4-72)||(25420616-25420684)
chr3 (21-77)||(52375824-52375880)
chr3 (21-77)||(55390090-55390146)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-77)||(4790-4866)
scaffold0295 (4-72)||(5266-5334)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-72)||(755-826)
scaffold1223 (1-74)||(1213-1286)
[»] chr1 (36 HSPs)
chr1 (1-76)||(18984117-18984192)
chr1 (1-72)||(33144391-33144462)
chr1 (1-75)||(50970750-50970824)
chr1 (1-74)||(8679013-8679086)
chr1 (1-73)||(4636443-4636515)
chr1 (1-73)||(5539817-5539889)
chr1 (1-73)||(8678542-8678614)
chr1 (1-77)||(9018970-9019046)
chr1 (4-75)||(5540293-5540364)
chr1 (1-76)||(15646190-15646265)
chr1 (1-76)||(50970276-50970351)
chr1 (1-75)||(15646667-15646741)
chr1 (1-75)||(18984591-18984665)
chr1 (1-75)||(29869619-29869693)
chr1 (1-75)||(39154492-39154566)
chr1 (1-74)||(29307414-29307487)
chr1 (1-74)||(29870091-29870164)
chr1 (1-66)||(33143925-33143990)
chr1 (1-77)||(2733429-2733505)
chr1 (1-77)||(21856039-21856115)
chr1 (1-76)||(15173566-15173640)
chr1 (1-72)||(17433687-17433758)
chr1 (1-75)||(52268289-52268363)
chr1 (1-74)||(21856515-21856588)
chr1 (1-74)||(26859059-26859132)
chr1 (1-74)||(29306953-29307026)
chr1 (1-73)||(5962579-5962651)
chr1 (1-77)||(9019435-9019511)
chr1 (1-76)||(26859531-26859606)
chr1 (1-71)||(5963050-5963120)
chr1 (9-71)||(15173099-15173161)
chr1 (1-72)||(39154021-39154092)
chr1 (1-74)||(17433216-17433289)
chr1 (9-72)||(47826966-47827029)
chr1 (1-83)||(47827060-47827141)
chr1 (1-72)||(52269220-52269291)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-74)||(19093-19166)
scaffold0176 (1-75)||(18834-18908)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-74)||(11095-11168)
scaffold0417 (1-52)||(10643-10694)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-77)||(134145-134221)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-75)||(28715-28789)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-71)||(64777-64847)
scaffold0007 (1-75)||(64301-64375)
[»] scaffold1585 (1 HSPs)
scaffold1585 (1-73)||(568-640)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-71)||(10344-10414)
scaffold0432 (1-71)||(9935-10005)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-77)||(42630-42706)
scaffold0027 (1-71)||(42172-42242)
[»] scaffold0076 (1 HSPs)
scaffold0076 (7-71)||(8487-8551)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-76)||(61026-61101)
scaffold0057 (1-71)||(61930-62000)
[»] scaffold1696 (1 HSPs)
scaffold1696 (2-70)||(454-521)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-57)||(16968-17024)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 194 - 476
Target Start/End: Original strand, 4903050 - 4903333
Alignment:
Q  194 aaaaggaatccataaaatttattctcatcccaaattgga-gcttacggtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattact 292  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4903050 aaaaggaatccataaaatttattctcatcccaaattggaagcttacagtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattact 4903149  T
Q  293 tttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctcaacctcacccatagctggtctttcatttggatctatattcaagcat 392  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4903150 tttcccacaatctgcttcctcctgcagtgctagagcatgctcaagttcgacctcaacctcacccatagctggtctttcatttggttctatattcaagcat 4903249  T
Q  393 cttttcatgatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataatcttatcagcaggg 476  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  4903250 cttttcatgatatccatgaacactgccaaacattgcggcgctattaatctcatgagaatgggatcaataatcttatcagcaggg 4903333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 201 - 465
Target Start/End: Original strand, 4906435 - 4906699
Alignment:
Q  201 atccataaaatttattctcatcccaaattggagcttacggtggttaactaggtagaattgatggttggaaaaagttaaaaatcaccattacttttcccac 300  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||||| || || |||||||||| ||||||||| |||||||||| ||||    
T  4906435 atccataaaatttattctcagcccaaatgggagcttaccgtggttaattaggtagaactggtgcttggaaaaaggtaaaaatcatcattactttttccac 4906534  T
Q  301 aatctgcttcctcctgcagtgctagagcattctcaagttcgacctcaacctcacccatagctggtctttcatttggatctatattcaagcatcttttcat 400  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4906535 aatctgcttcctcctgcagttccagagcatgctcaagttcgacctcaacctcacccatagctggtctttcatttggttctatattcaagcatcttttcat 4906634  T
Q  401 gatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataatct 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4906635 gatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataatct 4906699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 288 - 463
Target Start/End: Complemental strand, 4924099 - 4923921
Alignment:
Q  288 ttacttttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctcaacctcacccatagctggtctttcatttggatcta---tat 384  Q
    ||||||| ||||| ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||| | ||||||||||||||| |||    |||    
T  4924099 ttactttccccacgatctgcttcctcctgcagtgccaaagcatgctcaagttcaacctcaacctcacccattgttggtctttcatttggttctccactat 4924000  T
Q  385 tcaagcatcttttcatgatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataat 463  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  4923999 tcaagcatcttttcatgatattcataaacactgccaaacattgcggcgctatcaatctcatgagaatgggatcaataat 4923921  T

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Target: chr7; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 292 - 465
Target Start/End: Complemental strand, 5823114 - 5822941
Alignment:
Q  292 ttttcccacaatctgcttcctcctgcagtgctagagcattctcaagttcgacctcaacctcacccatagctggtctttcatttggatctatattcaagca 391  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  5823114 ttttcccatcatctgtttcctcctgcagtgctagagcatgctcgagttcaacctcaacctcgcccattgctggtctttcgtttgggtctatattcaagca 5823015  T
Q  392 tcttttcatgatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataatct 465  Q
    | ||||||||| |||||||||||| | ||||||   ||||||||||||||||||||||||||||||||||||||    
T  5823014 ttttttcatgacatccatgaacaccttcaaacaccacggcgcaatcaatctcatgagaatgggatcaataatct 5822941  T

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Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 303 - 472
Target Start/End: Complemental strand, 4929419 - 4929247
Alignment:
Q  303 tctgcttcctcctgcagtgctagagcattctcaagttcgacctcaacctcacccatagctggtctttcatttgg---atctatattcaagcatcttttca 399  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |  ||||||||||||||    ||| ||||||||||||||||||    
T  4929419 tctgcttcctcctgcagtgctagagcatgctcaagttcaacctcaacctcacccattgaaggtctttcatttggttcttctctattcaagcatcttttca 4929320  T
Q  400 tgatatccatgaacacttccaaacattgcggcgcaatcaatctcatgagaatgggatcaataatcttatcagc 472  Q
    ||||||  | ||||||| ||||||||| ||| | |||||||||| ||||||| ||||||||||| | ||||||    
T  4929319 tgatattgacgaacactgccaaacattccggtgaaatcaatctcgtgagaattggatcaataatttcatcagc 4929247  T

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Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19590598 - 19590525
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19590598 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

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Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19590997 - 19591073
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  19590997 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcctaa 19591073  T

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Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38859113 - 38859189
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38859113 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 38859189  T

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Target: chr7; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35289373 - 35289448
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  35289373 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35288976 - 35288903
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  35288976 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2658912 - 2658837
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  2658912 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

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Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19830493 - 19830418
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  19830493 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32004687 - 32004612
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32004687 ttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

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Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37786840 - 37786766
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  37786840 ttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2659312 - 2659388
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  2659312 ttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcctaa 2659388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 34533861 - 34533789
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  34533861 ttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37787239 - 37787315
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  37787239 ttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaa 37787315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19830891 - 19830965
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| |||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  19830891 ttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38858716 - 38858642
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| |||||||||    
T  38858716 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 4478175 - 4478247
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||| ||||    
T  4478175 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38161024 - 38160948
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||  | |||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  38161024 ttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaagcctaa 38160948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34534263 - 34534338
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  34534263 ttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29100323 - 29100393
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||    
T  29100323 ttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23952804 - 23952727
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggc-caaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| ||||| |||||||| ||||  |||||||||| ||||||||||||||||||||||||    
T  23952804 ttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcctaa 23952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32005086 - 32005159
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| |||||||||||||| || ||||||||| || |||||||||||||||||||||    
T  32005086 ttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28584394 - 28584466
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||| || ||||| |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  28584394 ttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29099923 - 29099863
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaa 61  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  29099923 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4641513 - 4641443
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||| ||||| ||||| |||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  4641513 ttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 28583506 - 28583437
Alignment:
Q  7 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||| |||| | || ||| ||||||||||||||| |||||||||||||||||||||||    
T  28583506 tgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4641916 - 4641983
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||||| ||||||||||   |||| ||||||||||||||| ||||||||||||||||||    
T  4641916 ttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23953201 - 23953268
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 68  Q
    |||||||||||| ||||||| ||||||||||||||| |||  |||||||||| |||||||| ||||||    
T  23953201 ttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 16195057 - 16194936
Alignment:
Q  75 taagtttaatacatgttacacttacatgaaatacctggtcttccttaactaaattgggtttcatttatatattgattattaaatgagagaagaaggattg 174  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16195057 taagtttaatacatgttacacttacatgaaatacctagtcttccttaactaaattgggtttcatttatatattgattattaaatgagagaagaaggattg 16194958  T
Q  175 tgctcccctgcatttgcataaa 196  Q
    ||||||||||||||||||||||    
T  16194957 tgctcccctgcatttgcataaa 16194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18451303 - 18451379
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  18451303 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20440503 - 20440579
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  20440503 ttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 20440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26538551 - 26538627
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26538551 ttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11090992 - 11091067
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11090992 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22374393 - 22374318
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374393 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18450903 - 18450829
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18450903 ttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

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Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20444822 - 20444748
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  20444822 ttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40027213 - 40027139
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  40027213 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28616686 - 28616613
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28616686 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 239425 - 239350
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  239425 ttgttctgttttaaaagg-caggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcctaa 239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43058804 - 43058880
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  43058804 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctaa 43058880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1978181 - 1978106
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||    
T  1978181 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1978581 - 1978656
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||    
T  1978581 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11090594 - 11090519
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  11090594 ttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22374797 - 22374872
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374797 ttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26538170 - 26538096
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  26538170 ttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28617086 - 28617160
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  28617086 ttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40027612 - 40027682
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  40027612 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 239824 - 239896
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||    
T  239824 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40815418 - 40815338
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 81  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||    
T  40815418 ttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagacaaagttt 40815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40815817 - 40815893
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  40815817 ttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 40815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3025539 - 3025463
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||| || |||||    
T  3025539 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaa 3025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7446818 - 7446894
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| || | |||||||||| || ||||| |||||||||||||||    
T  7446818 ttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcctaa 7446894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35781135 - 35781207
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||||| || |||||||||||||||||    
T  35781135 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28847167 - 28847242
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| ||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||    
T  28847167 ttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7446415 - 7446341
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||||||||| || |||||||||||||||||||    
T  7446415 ttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35779781 - 35779708
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| |||||||||| |||||||| || | |||||||||| |||||||||||||||||||||    
T  35779781 ttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43058406 - 43058333
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| |||||||||||||| |||| | ||||||||||||| || ||||||||||||||||||    
T  43058406 ttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 14432207 - 14432145
Alignment:
Q  9 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  14432207 ttttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14432616 - 14432689
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||||||||| |||||||| |||||||||| ||||    
T  14432616 ttctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaaggctaa 14432689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8972310 - 8972239
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||| |||||||| ||||| ||||||||  | |||||||||||| |||||||||||||||||||    
T  8972310 ttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8425428 - 8425358
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||| || | ||||| |||||||| ||||||||||||| | ||||||||||||||||||    
T  8425428 ttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8425832 - 8425902
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||||||||| |||||||| ||| ||||||||| |  |||||||||||||||||    
T  8425832 ttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 3025940 - 3026006
Alignment:
Q  7 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| |||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  3025940 tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15551572 - 15551501
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||| |||||||||| |||| ||||| |||||||| ||  ||||||||||| |||||||||||||||||||    
T  15551572 ttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15552526 - 15552596
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||| ||| || |||||||| ||||||||||||  | |||||||||||||||||||    
T  15552526 ttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25447708 - 25447783
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25447708 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23494915 - 23494991
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23494915 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15523308 - 15523233
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15523308 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12234402 - 12234326
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  12234402 ttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcctaa 12234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11153619 - 11153692
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11153619 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22434252 - 22434179
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  22434252 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25447320 - 25447247
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  25447320 ttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 46193478 - 46193405
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  46193478 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25937743 - 25937667
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  25937743 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaa 25937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20470983 - 20471062
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 80  Q
    ||||||||||||||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  20470983 ttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 20471062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46193877 - 46193948
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  46193877 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15523706 - 15523780
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  15523706 ttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25938143 - 25938217
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  25938143 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45082896 - 45082969
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  45082896 ttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4220031 - 4220107
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  4220031 ttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 4220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18763992 - 18764068
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  18763992 ttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23494516 - 23494445
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  23494516 ttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38962291 - 38962362
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  38962291 ttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 51021267 - 51021342
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  51021267 ttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12234801 - 12234874
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  12234801 ttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20958331 - 20958403
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||| ||||||||||||||||    
T  20958331 ttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51020870 - 51020794
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||| || || |||||||||||||||||||||    
T  51020870 ttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcctaa 51020794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2118366 - 2118295
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||    
T  2118366 ttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33109757 - 33109686
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||||    
T  33109757 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33109936 - 33110011
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| ||||||||||||||||||||| ||||||||  ||||||||||| || |||||||||||||||||||||||    
T  33109936 ttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 54995142 - 54995067
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||| |||||| |||||||||||||||||| ||||    
T  54995142 ttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 54995539 - 54995614
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  54995539 ttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 10258363 - 10258433
Alignment:
Q  5 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||||||||    
T  10258363 tctgttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18751672 - 18751602
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||||    
T  18751672 ttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48526653 - 48526723
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  48526653 ttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22434649 - 22434724
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||    
T  22434649 ttgttctgttt-aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaacctaa 22434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44890590 - 44890518
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||| | |||||||| |||||||||||    
T  44890590 ttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 4219622 - 4219559
Alignment:
Q  9 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  4219622 ttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2118767 - 2118837
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||| ||||||||||||  |||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  2118767 ttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48526269 - 48526195
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||  |||||||| ||| |||| ||||||||||  |||||||||||||||||||||    
T  48526269 ttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 35363081 - 35363146
Alignment:
Q  9 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  35363081 ttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 11153216 - 11153145
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||| ||||||||||||| ||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||    
T  11153216 ttctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48708368 - 48708293
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| |||||||||||||||||| || |||||||  |||||||||||||   |||||||||||||||||||||||    
T  48708368 ttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44892620 - 44892692
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||| ||||| |||| |||||||| |||| |||||||||| |||||||| | |||||||||    
T  44892620 ttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43243752 - 43243803
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 52  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  43243752 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacga 43243803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48293667 - 48293592
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| |||||||||  | ||||| || |||||||| || |||||||||||| |||||||||||||||||||||||    
T  48293667 ttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22170409 - 22170482
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| |||||||||| |||||||| | |||||| | |||| |||||||||| ||||||||||||||||||||||    
T  22170409 ttgttttgttttaaaaaggcaggacaa-tttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45082504 - 45082429
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||| |||||||||||||  ||||||| ||||| ||| ||||||||||| ||||||||| |||||||| |||||    
T  45082504 ttgttctattttaaaagggcaaaaccagtt-cgtgagtagaccaaaacacgatgaccaaaagcgtaattaaacctaa 45082429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43281262 - 43281313
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 52  Q
    |||||||||||||||| |||| ||||| |||||||| |||||||||||||||    
T  43281262 ttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacga 43281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48295015 - 48295088
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||| |||||||||  |||| ||||| |||||||| |||  |||||||||| |||||||| ||||||||||||    
T  48295015 ttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48713818 - 48713893
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||| ||| ||||| |||| ||| ||||| |||||||||  |  |||||||||||||| ||||    
T  48713818 ttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 55189601 - 55189528
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||  |||| |||  |||||||| |||||||||| || ||||| | ||||||||||    
T  55189601 ttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12503509 - 12503453
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 57  Q
    |||||||||||||||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  12503509 ttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 16691560 - 16691616
Alignment:
Q  18 ggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||| |||||||| |||| ||||||||   || ||||||||||||||||||    
T  16691560 ggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 9e-31; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12935230 - 12935154
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12935230 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22219825 - 22219901
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22219825 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 22219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20741173 - 20741098
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  20741173 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11445459 - 11445535
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445459 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11445535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1149538 - 1149463
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  1149538 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18257210 - 18257135
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  18257210 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23075600 - 23075675
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23075600 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10900012 - 10899942
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  10900012 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23074072 - 23073998
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23074072 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11277054 - 11277127
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  11277054 ttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2319745 - 2319669
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  2319745 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaa 2319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18504992 - 18504922
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18504992 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20741576 - 20741650
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  20741576 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10900402 - 10900475
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  10900402 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 11445057 - 11444984
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445057 ttctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18257609 - 18257682
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||    
T  18257609 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28472710 - 28472634
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  28472710 ttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 28472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29859899 - 29859823
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  29859899 ttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 29859823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12935629 - 12935704
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||| || ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  12935629 ttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15828113 - 15828187
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| ||||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15828113 ttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31470388 - 31470314
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  31470388 ttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31470788 - 31470860
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  31470788 ttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29033507 - 29033436
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||||    
T  29033507 ttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2322690 - 2322760
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  2322690 ttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1149904 - 1149977
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||||||||||||||    
T  1149904 ttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15827711 - 15827639
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||| |||||||||||| ||| ||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  15827711 ttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18505391 - 18505463
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||| |||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  18505391 ttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29035109 - 29035180
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||||  |||| |||||||| ||||| ||||||||| ||| |||||||||||||||    
T  29035109 ttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3835198 - 3835268
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||  |||||||||| |||||||| |||| ||||||||   ||||||||||||||||||    
T  3835198 ttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 4811442 - 4811372
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| ||   |||||||||||||||||||||    
T  4811442 ttctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11276663 - 11276589
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||| |||| ||||||| ||| ||| ||||||||||  ||| ||| ||||||||||||||    
T  11276663 ttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4811728 - 4811801
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||  ||| || ||||||| ||| ||||||||||||||| || ||||||| ||||||||||    
T  4811728 ttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  18 ggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||| |||||||| | || ||||| |||| |||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18296218 - 18296142
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||  | || ||| |||| || | |||||||||| ||| |||| | |||||||||||||    
T  18296218 ttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggactaaaattataattaagcctaa 18296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 9e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18183441 - 18183517
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18183441 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18183517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2865227 - 2865302
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2865227 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19359608 - 19359683
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19359608 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5819401 - 5819474
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  5819401 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8647910 - 8647986
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8647910 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 8647986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15372345 - 15372421
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  15372345 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 15372421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5819002 - 5818927
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  5819002 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8647511 - 8647438
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  8647511 ttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24331632 - 24331556
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||    
T  24331632 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcctaa 24331556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 24362311 - 24362383
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  24362311 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8461003 - 8460928
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||    
T  8461003 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18183043 - 18182968
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  18183043 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8461403 - 8461477
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8461403 ttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16018662 - 16018588
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||    
T  16018662 ttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29455214 - 29455288
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||    
T  29455214 ttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14215715 - 14215792
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 78  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||| ||||||||||||||||    
T  14215715 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcctaag 14215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19359209 - 19359136
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  19359209 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15709044 - 15708968
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  15709044 ttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaa 15708968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 164264 - 164191
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||| |||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  164264 ttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25000561 - 25000635
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||  || ||||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  25000561 ttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29454813 - 29454739
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||| ||||||||||    
T  29454813 ttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7349489 - 7349562
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||| ||||||||||| ||||||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  7349489 ttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4222194 - 4222266
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||| ||||| ||||||||  || ||||||||||| ||||||||||||||||||||    
T  4222194 ttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14215314 - 14215243
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||| |  ||||||||||||| || |||||||||||| |||||||||||||||||||    
T  14215314 ttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4623221 - 4623148
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||  |||||||||| |||||||| || | |||||||||| |||||||||||||||||||||    
T  4623221 ttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2864827 - 2864756
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||| ||||||||||||||| || || |||||||| ||||||||||||| | |||||||||||||||||||    
T  2864827 ttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4219736 - 4219663
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| |||| ||||| ||| || ||||| ||||||||||| || ||||||||||||||||||    
T  4219736 ttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7348632 - 7348559
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| ||||| |||||||| ||| | |||||| || |||||||| ||||||||||||    
T  7348632 ttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15709441 - 15709513
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||| ||||| ||| |||||| ||| ||||||||||||| | |||||||||||||||||||||    
T  15709441 ttgttctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 164663 - 164739
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| ||||||||| |||| | |||||||||| || || ||||| | |||||||||||||    
T  164663 ttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcctaa 164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6018387 - 6018315
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||| || |||||||||||||| |||  ||||||||||  ||||||| |||||||||||    
T  6018387 ttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 16019062 - 16019134
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||| ||||||||| ||||||||| |||||||| || ||||||||| || |||||||||||||||||| ||||    
T  16019062 ttctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14463992 - 14464067
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||| |||||||||| ||  |  |||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  14463992 ttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15371943 - 15371873
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||||||||||  ||||||| ||| |||||| |||| || ||||||||||||||||    
T  15371943 ttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24325285 - 24325218
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 68  Q
    ||||||||||||| ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24325285 ttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24361910 - 24361843
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 68  Q
    ||||||||||||| ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24361910 ttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24332034 - 24332107
Alignment:
Q  1 ttgttctgttttaaaag-ggcaggaccagtttcgtgaataggccaaaacacgaagacc-aaaagtgtaattaag 72  Q
    ||||||||||||||||  ||||||| ||||||||||| || ||||||||| || |||| |||||||||||||||    
T  24332034 ttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6019243 - 6019309
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 68  Q
    ||||||||||||||||| ||| || ||||||||||| || ||||||||| || |||||||| ||||||    
T  6019243 ttgttctgttttaaaagagcaagatcagtttcgtgagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25000160 - 25000112
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 52  Q
    ||||||||||| |||||| |||||  ||||||| |||||||||||||||    
T  25000160 ttctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2139 - 2218
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 80  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  2139 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1740 - 1665
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  1740 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4679 - 4754
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4679 ttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4276 - 4242
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtg 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  4276 ttgttttgttttaaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41681207 - 41681132
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19176363 - 19176287
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176363 ttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19176762 - 19176838
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176762 ttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13225111 - 13225185
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13225111 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12571936 - 12571855
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttta 82  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||    
T  12571936 ttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaattta 12571855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41681606 - 41681679
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41681606 ttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11656528 - 11656452
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11656528 ttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31133692 - 31133764
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31133692 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33742995 - 33742919
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  33742995 ttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 33742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34541020 - 34541096
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34541020 ttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 34541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9930129 - 9930203
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  9930129 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11656929 - 11657003
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11656929 ttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44831320 - 44831246
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||    
T  44831320 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44831717 - 44831799
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaa 83  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| ||||||||||| |||||    
T  44831717 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctaattttaa 44831799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13224713 - 13224645
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 70  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13224713 ttgttctgttttaaaagggcag-accagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 11336997 - 11337069
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  11336997 ttctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31133293 - 31133213
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 81  Q
    ||||| |||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||    
T  31133293 ttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctatgttt 31133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9928982 - 9928912
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  9928982 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33328231 - 33328161
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33328231 ttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9178107 - 9178180
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  9178107 ttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4629870 - 4629795
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||  |  ||||||| |||||||||||    
T  4629870 ttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8074023 - 8074097
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||| |||||||||| ||| |||||||    
T  8074023 ttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12572323 - 12572393
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||| ||| ||| |||||||||| ||| ||||||||||| ||||||||||||||||||    
T  12572323 ttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 4630261 - 4630328
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||  ||||||||| |||||||| ||| ||||||||||| || |||||||||||||||    
T  4630261 ttctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33328612 - 33328683
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||| ||||||||||| ||| ||| |||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  33328612 ttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  41 gccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||| |||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 43958254 - 43958206
Alignment:
Q  29 tttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||| |||  ||||||||||||||||||||| |||||||| ||||    
T  43958254 tttcgtgagtagatcaaaacacgaagaccaaaagtataattaagtctaa 43958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31779124 - 31779199
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31779124 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32535435 - 32535508
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  32535435 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39556049 - 39556122
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39556049 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17464564 - 17464488
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17464564 ttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcctaa 17464488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43973912 - 43973988
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43973912 ttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 43973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39555651 - 39555577
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39555651 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20840633 - 20840556
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 78  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  20840633 ttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaag 20840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29801888 - 29801964
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||    
T  29801888 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaa 29801964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48453062 - 48452986
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  48453062 ttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcctaa 48452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51473501 - 51473429
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  51473501 ttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4275836 - 4275911
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4275836 ttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20841033 - 20841107
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  20841033 ttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31778726 - 31778652
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||    
T  31778726 ttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29801429 - 29801356
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||    
T  29801429 ttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37727402 - 37727475
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  37727402 ttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5137453 - 5137529
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||| |||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  5137453 ttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 5137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24301028 - 24301104
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||| |||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24301028 ttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 24301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23644535 - 23644461
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||    
T  23644535 ttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27393734 - 27393660
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||| |||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  27393734 ttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27394049 - 27394123
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  27394049 ttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30098235 - 30098309
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  30098235 ttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 30104549 - 30104479
Alignment:
Q  7 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  30104549 tgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 30104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41046773 - 41046703
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  41046773 ttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23644937 - 23645010
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  23644937 ttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25853307 - 25853234
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| ||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  25853307 ttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5137053 - 5136978
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||||||||||||||| ||||    
T  5137053 ttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37222043 - 37222118
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||| |||||||||| ||| |||| |||| |||||||||| |||||||||||||||||||||||    
T  37222043 ttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25612449 - 25612519
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||    
T  25612449 ttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32535032 - 32534962
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||| |||||||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  32535032 ttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26837828 - 26837903
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||| ||||||| |||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  26837828 ttgttctattttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 24300626 - 24300560
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  24300626 ttctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacg-agaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37727002 - 37726928
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| |||||||||||||||| ||||||||||| |  || ||||||||||| ||||||||||||||||||||||    
T  37727002 ttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22425285 - 22425354
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 70  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  22425285 ttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43973514 - 43973441
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||  | || |||||||| |||| |||||||||| |||||||||||||||||||||    
T  43973514 ttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22424887 - 22424811
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||| ||| ||||||||||| | |||||  ||||||||  |||||||||||||||||||||||    
T  22424887 ttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaa 22424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51474806 - 51474882
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||| ||||||||||||||| ||||| |||||||| || |||||||||||   |||||||||||||||||||||||    
T  51474806 ttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcctaa 51474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 23228486 - 23228552
Alignment:
Q  8 gttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||| || || |||||||| ||||||||||||||  |||||||||||||||||||||    
T  23228486 gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26274640 - 26274570
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||| || | || ||||| |||||||||    
T  26274640 ttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25419217 - 25419145
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||||||| || | |||||||| || || |||||||||||||||||||| |||| ||||    
T  25419217 ttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25853699 - 25853770
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||| | || |||||||||||||| |||  |||||||||| || ||||||||||||||||    
T  25853699 ttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 41047173 - 41047239
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||| ||||| | |||||||||||||    
T  41047173 ttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45966011 - 45965936
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||| ||||||||||| ||||||  |  ||||||| || |||||||||||| |||||||||||||||||||||||    
T  45966011 ttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17464964 - 17465038
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||| |||||||||||   |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||    
T  17464964 ttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 26275041 - 26275114
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| | | |||||| | ||||||| |||||    
T  26275041 ttctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaacctaa 26275114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 26837427 - 26837358
Alignment:
Q  7 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||| |||||||||||||||| |||||||| |||||||||| || | |||||||| ||||||||| ||||    
T  26837427 tgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50116881 - 50116954
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||| ||| ||||||||| ||||| |||||||| || | |||||||||| || ||||||||||||||||||    
T  50116881 ttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32697172 - 32697244
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||  ||| | |||||||| ||||| ||||||||| |||||||| | |||||||||    
T  32697172 ttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 37220627 - 37220555
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||| ||| || |  | | |||| |||||||||| |||| |||||||||||||||||||||||    
T  37220627 ttctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 25420616 - 25420684
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||| ||||||||||||  || || |||||||| |||| ||||| |||| || ||||||||||||||||    
T  25420616 ttctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 52375824 - 52375880
Alignment:
Q  21 aggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||| |||||||| | || |||||  ||| ||||||||||||||||||||||||    
T  52375824 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 52375880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 55390090 - 55390146
Alignment:
Q  21 aggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||| |||||||||| ||  ||||  ||| ||||||||||||||||||||||||    
T  55390090 aggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcctaa 55390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4866 - 4790
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4866 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 5266 - 5334
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  5266 ttctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 826 - 755
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  826 ttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1213 - 1286
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||    
T  1213 ttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18984192 - 18984117
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  18984192 ttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 33144391 - 33144462
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  33144391 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50970750 - 50970824
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  50970750 ttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8679013 - 8679086
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  8679013 ttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4636443 - 4636515
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4636443 ttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5539889 - 5539817
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  5539889 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8678614 - 8678542
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8678614 ttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9019046 - 9018970
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  9019046 ttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 9018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 5540293 - 5540364
Alignment:
Q  4 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5540293 ttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15646265 - 15646190
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  15646265 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50970351 - 50970276
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  50970351 ttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15646667 - 15646741
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15646667 ttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18984591 - 18984665
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  18984591 ttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 29869693 - 29869619
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  29869693 ttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39154492 - 39154566
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39154492 ttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29307414 - 29307487
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  29307414 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29870091 - 29870164
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  29870091 ttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33143990 - 33143925
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgta 66  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  33143990 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2733429 - 2733505
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||||||||||    
T  2733429 ttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaa 2733505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21856115 - 21856039
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||| ||||    
T  21856115 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtctaa 21856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15173566 - 15173640
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  15173566 ttgttctgttttaaaagg-caggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17433687 - 17433758
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  17433687 ttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 52268363 - 52268289
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||    
T  52268363 ttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21856515 - 21856588
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  21856515 ttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26859132 - 26859059
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  26859132 ttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29307026 - 29306953
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  29307026 ttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5962651 - 5962579
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||| |||||||||||    
T  5962651 ttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9019435 - 9019511
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||| ||||| |||||||| |||| |||| |||||||||| ||||||||||||||||||||||||    
T  9019435 ttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 9019511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26859531 - 26859606
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||||||||||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  26859531 ttgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5963050 - 5963120
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  5963050 ttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 15173161 - 15173099
Alignment:
Q  9 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  15173161 ttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39154092 - 39154021
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||||||||||| || ||||||||||| || ||||||||| || |||||||||||||||||||    
T  39154092 ttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17433289 - 17433216
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||| |  ||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  17433289 ttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 47827029 - 47826966
Alignment:
Q  9 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||    
T  47827029 ttttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47827060 - 47827141
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaa 83  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||| | ||| ||||||||| |||||||| || |||||    
T  47827060 ttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgt-attaagccaaaatttaa 47827141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52269220 - 52269291
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 72  Q
    |||||||||||||||||||||| |||  |||| ||| || | |||||||||| |||||||||||||||||||    
T  52269220 ttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggaccaaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19093 - 19166
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19093 ttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18908 - 18834
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||  | ||||||||||||||| ||||||    
T  18908 ttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11095 - 11168
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 74  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  11095 ttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10694 - 10643
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 52  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  10694 ttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 134145 - 134221
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    ||||||||| ||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  134145 ttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 134221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28715 - 28789
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||| ||||    
T  28715 ttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 64777 - 64847
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  64777 ttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 64375 - 64301
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 75  Q
    |||||||||||||||||| ||||| ||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  64375 ttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 640 - 568
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 73  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||||| || |||||||||||||||||    
T  640 ttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10344 - 10414
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||||||||| |  ||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  10344 ttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10005 - 9935
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||| | ||||||||||| || ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  10005 ttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42630 - 42706
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 77  Q
    |||||||||||||||||||||| | ||||||| ||| ||| ||||||||||| | |||||||| |||||||||||||    
T  42630 ttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcctaa 42706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42242 - 42172
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    |||||||||||||||| ||||||| ||||||||||| ||| |||||||||||  || ||||||||||||||    
T  42242 ttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 8487 - 8551
Alignment:
Q  7 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||||||||| |||||||||||||| | ||| |||||||| |||||||||||||||||||||    
T  8487 tgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 61101 - 61026
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 76  Q
    ||||||| |||||||| ||||||| || |||||||| ||||||||||||||| || |||||||||| |||||||||    
T  61101 ttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 61930 - 62000
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 71  Q
    ||||||| ||||||||||| ||||||| |||||||| ||| ||||||||||| || |||||||||||||||    
T  61930 ttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 521 - 454
Alignment:
Q  2 tgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 70  Q
    |||| |||||||||||  || ||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  521 tgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16968 - 17024
Alignment:
Q  1 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 57  Q
    |||||||||||||||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  16968 ttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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