View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18623_low_21 (Length: 317)
Name: NF18623_low_21
Description: NF18623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18623_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 41 - 301
Target Start/End: Original strand, 38926234 - 38926494
Alignment:
| Q |
41 |
aataatctacaagatttataattaatacaagaccagttttctttataactaaaccagcaagaaggattttgtttcttgctttttcttcctacgcaccaaa |
140 |
Q |
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| T |
38926234 |
aataatctacaagatttataattaatacaagaccagttttctttataattaaaccagcaagaaggattttgtttcttgctttttcttcctacgcaccaaa |
38926333 |
T |
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| Q |
141 |
caatcaaccttattacacaaaaacaagaacatgttctacaaatttcttgctaatctttcctgtgccgccatctgttttctgaacctgttaatgaactcct |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38926334 |
caatcaaccttattacacaaaaacaagaacatgttctacaaatttcttgctaatctttcctgtgccgccatctgttttctgaacctgttaatgaactcct |
38926433 |
T |
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| Q |
241 |
ctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatc |
301 |
Q |
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| T |
38926434 |
ctgctcgttcatcaattccttgcatttgaggtgaagctaatgctaccgactcccacatatc |
38926494 |
T |
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