View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18624_high_15 (Length: 281)
Name: NF18624_high_15
Description: NF18624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18624_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 26468075 - 26468325
Alignment:
| Q |
18 |
gtttctatttataaggactcctttatcttagagtgaacaatgttccacaagataaacacaccctcaacactactatatatgaatcccttgttcgatttca |
117 |
Q |
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| T |
26468075 |
gtttctatttataaggactcctttatcttagagtgaacaatgttccacaagacaaacacatcctcaacactactatatatgaatcccttgttcgatttca |
26468174 |
T |
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| Q |
118 |
atcacaaaatttcagattattctcaaatgattggttcctctcttggtcatcaataatgcattattgaattaaattgtgttgacaataggtgatatgcagt |
217 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
26468175 |
atcacaaaatttcatattattctcaaatgattggttcctctcttggtcatcaagaatgcattattgaattaaattgtgtcgacaataggtgatatgcagt |
26468274 |
T |
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| Q |
218 |
gcaacaaagtccatggattcaattcacgttgctgtaatttcaaatctcaat |
268 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26468275 |
gcaacaaagtccatggattcaattcacgtcgctgtaatttcaaatctcaat |
26468325 |
T |
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