View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18624_high_16 (Length: 246)

Name: NF18624_high_16
Description: NF18624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18624_high_16
NF18624_high_16
[»] chr3 (31 HSPs)
chr3 (16-228)||(28842937-28843149)
chr3 (43-84)||(41028957-41028999)
chr3 (51-104)||(36200020-36200073)
chr3 (50-107)||(49739466-49739523)
chr3 (51-107)||(2070954-2071010)
chr3 (50-82)||(16790470-16790502)
chr3 (51-107)||(24268270-24268326)
chr3 (51-83)||(33307695-33307727)
chr3 (42-89)||(48528495-48528543)
chr3 (51-98)||(1288912-1288959)
chr3 (43-97)||(16790194-16790249)
chr3 (51-82)||(27792796-27792827)
chr3 (65-104)||(28842986-28843025)
chr3 (51-106)||(29601182-29601237)
chr3 (57-116)||(39971210-39971268)
chr3 (53-84)||(44374761-44374792)
chr3 (50-104)||(25170630-25170684)
chr3 (50-104)||(25170717-25170771)
chr3 (51-89)||(34759642-34759679)
chr3 (57-98)||(1391416-1391457)
chr3 (57-98)||(10105751-10105792)
chr3 (51-84)||(20502191-20502224)
chr3 (54-107)||(29094280-29094333)
chr3 (43-98)||(35127477-35127534)
chr3 (43-91)||(44284164-44284213)
chr3 (50-83)||(49772782-49772815)
chr3 (50-98)||(9279440-9279488)
chr3 (55-107)||(21862295-21862347)
chr3 (43-90)||(22232742-22232790)
chr3 (42-120)||(27291004-27291083)
chr3 (51-98)||(30574027-30574075)
[»] chr5 (32 HSPs)
chr5 (51-120)||(26516185-26516253)
chr5 (43-98)||(20982241-20982297)
chr5 (51-106)||(40534094-40534149)
chr5 (51-118)||(2569817-2569883)
chr5 (51-118)||(37611306-37611372)
chr5 (51-118)||(37788036-37788102)
chr5 (50-96)||(24084808-24084854)
chr5 (43-107)||(29588779-29588844)
chr5 (53-98)||(31687933-31687978)
chr5 (50-98)||(4991057-4991105)
chr5 (51-107)||(32172552-32172608)
chr5 (50-120)||(32059702-32059770)
chr5 (51-97)||(6738522-6738568)
chr5 (50-84)||(11684345-11684379)
chr5 (50-96)||(29014666-29014712)
chr5 (50-84)||(29365541-29365575)
chr5 (58-104)||(35963150-35963196)
chr5 (57-98)||(6739780-6739821)
chr5 (50-83)||(10391276-10391309)
chr5 (51-80)||(10798519-10798548)
chr5 (42-90)||(23999072-23999121)
chr5 (50-98)||(28776882-28776931)
chr5 (51-120)||(29115328-29115396)
chr5 (53-102)||(31694422-31694471)
chr5 (43-91)||(38819681-38819730)
chr5 (57-105)||(2102892-2102940)
chr5 (55-103)||(11153532-11153580)
chr5 (51-107)||(11434972-11435028)
chr5 (43-82)||(13224353-13224393)
chr5 (51-83)||(36539669-36539701)
chr5 (51-98)||(39105371-39105419)
chr5 (51-98)||(42582819-42582867)
[»] chr2 (27 HSPs)
chr2 (43-109)||(33197345-33197412)
chr2 (51-107)||(11393481-11393537)
chr2 (51-107)||(11393770-11393826)
chr2 (51-107)||(11410142-11410198)
chr2 (51-107)||(11410431-11410487)
chr2 (50-97)||(43808485-43808532)
chr2 (43-107)||(38239657-38239722)
chr2 (50-107)||(43456799-43456856)
chr2 (51-100)||(43965245-43965294)
chr2 (51-107)||(25609696-25609751)
chr2 (51-87)||(35809852-35809888)
chr2 (50-90)||(44606202-44606242)
chr2 (52-107)||(11513800-11513855)
chr2 (49-120)||(17221653-17221724)
chr2 (45-107)||(29318771-29318834)
chr2 (43-121)||(31461324-31461402)
chr2 (50-120)||(40851482-40851551)
chr2 (57-107)||(43635221-43635271)
chr2 (51-84)||(9478221-9478254)
chr2 (50-107)||(10190178-10190235)
chr2 (50-82)||(3102617-3102649)
chr2 (50-107)||(3235496-3235555)
chr2 (50-89)||(28901993-28902033)
chr2 (43-82)||(33267622-33267662)
chr2 (51-107)||(35459809-35459865)
chr2 (51-91)||(36852380-36852420)
chr2 (52-84)||(37766720-37766752)
[»] chr8 (42 HSPs)
chr8 (43-107)||(31884493-31884558)
chr8 (51-107)||(12972755-12972811)
chr8 (51-97)||(31875674-31875720)
chr8 (43-119)||(14482090-14482166)
chr8 (52-109)||(28769455-28769512)
chr8 (42-109)||(26716541-26716609)
chr8 (52-107)||(11494216-11494271)
chr8 (54-93)||(14929295-14929334)
chr8 (51-106)||(35869737-35869792)
chr8 (50-96)||(6918941-6918987)
chr8 (51-120)||(38036227-38036294)
chr8 (53-98)||(6966816-6966861)
chr8 (60-105)||(11745777-11745822)
chr8 (52-117)||(27320206-27320270)
chr8 (43-107)||(39392767-39392832)
chr8 (51-107)||(10727096-10727152)
chr8 (51-107)||(11477002-11477058)
chr8 (51-107)||(21270171-21270227)
chr8 (43-83)||(30013142-30013182)
chr8 (50-90)||(34788541-34788581)
chr8 (50-89)||(30172753-30172792)
chr8 (51-82)||(35298593-35298624)
chr8 (57-107)||(1117245-1117295)
chr8 (51-97)||(3645931-3645977)
chr8 (43-84)||(8536154-8536196)
chr8 (51-120)||(2107441-2107509)
chr8 (51-120)||(8194053-8194121)
chr8 (61-98)||(8578530-8578567)
chr8 (53-98)||(8603609-8603654)
chr8 (43-106)||(8823499-8823564)
chr8 (52-97)||(29592648-29592693)
chr8 (51-88)||(35534976-35535013)
chr8 (55-107)||(787225-787277)
chr8 (51-98)||(2833445-2833493)
chr8 (51-98)||(2840266-2840314)
chr8 (51-98)||(2844953-2845001)
chr8 (51-107)||(8060561-8060617)
chr8 (59-107)||(8062139-8062187)
chr8 (43-82)||(8629033-8629073)
chr8 (51-91)||(11813220-11813260)
chr8 (42-89)||(26717174-26717222)
chr8 (51-107)||(40280320-40280376)
[»] chr4 (24 HSPs)
chr4 (51-107)||(485980-486036)
chr4 (50-120)||(24193472-24193541)
chr4 (52-90)||(54414865-54414903)
chr4 (50-107)||(21157667-21157724)
chr4 (50-107)||(43932332-43932389)
chr4 (50-107)||(46796917-46796974)
chr4 (43-103)||(51555973-51556034)
chr4 (51-106)||(24443938-24443993)
chr4 (42-116)||(25548209-25548283)
chr4 (43-88)||(4191657-4191703)
chr4 (51-109)||(11264198-11264256)
chr4 (43-89)||(53155182-53155228)
chr4 (43-91)||(2980577-2980626)
chr4 (43-98)||(22684622-22684678)
chr4 (51-90)||(9843781-9843820)
chr4 (43-89)||(19422335-19422382)
chr4 (51-109)||(29601123-29601181)
chr4 (53-107)||(46053599-46053653)
chr4 (51-88)||(969460-969497)
chr4 (58-91)||(4243256-4243289)
chr4 (50-98)||(21731767-21731816)
chr4 (43-79)||(47970245-47970282)
chr4 (51-79)||(41603506-41603534)
chr4 (51-91)||(44319865-44319905)
[»] scaffold0590 (1 HSPs)
scaffold0590 (43-120)||(1180-1257)
[»] scaffold0275 (1 HSPs)
scaffold0275 (43-120)||(2718-2795)
[»] chr6 (36 HSPs)
chr6 (51-108)||(32386214-32386271)
chr6 (50-90)||(3217304-3217344)
chr6 (43-98)||(31668791-31668847)
chr6 (51-102)||(4248862-4248913)
chr6 (51-104)||(2514604-2514657)
chr6 (51-104)||(5623072-5623125)
chr6 (51-104)||(7148569-7148622)
chr6 (43-107)||(10452466-10452531)
chr6 (43-107)||(31461577-31461642)
chr6 (51-120)||(32975865-32975933)
chr6 (53-105)||(3155077-3155129)
chr6 (50-98)||(10017369-10017417)
chr6 (46-89)||(10400186-10400229)
chr6 (43-97)||(33068667-33068722)
chr6 (50-88)||(740982-741020)
chr6 (51-97)||(7351723-7351769)
chr6 (43-84)||(29249396-29249438)
chr6 (55-84)||(2727975-2728004)
chr6 (58-107)||(21919973-21920022)
chr6 (51-104)||(21959630-21959683)
chr6 (43-91)||(22742281-22742330)
chr6 (53-90)||(24631975-24632012)
chr6 (51-91)||(31686559-31686600)
chr6 (50-98)||(1497888-1497936)
chr6 (51-94)||(1669902-1669946)
chr6 (50-106)||(2027918-2027974)
chr6 (51-107)||(3737968-3738024)
chr6 (43-82)||(4247740-4247780)
chr6 (43-82)||(8010281-8010321)
chr6 (51-107)||(8349779-8349835)
chr6 (51-91)||(14706690-14706730)
chr6 (51-107)||(19800545-19800601)
chr6 (51-91)||(24332858-24332898)
chr6 (51-107)||(29274344-29274400)
chr6 (50-78)||(33259744-33259772)
chr6 (50-98)||(33828554-33828602)
[»] chr1 (26 HSPs)
chr1 (43-107)||(23895235-23895300)
chr1 (50-89)||(870962-871001)
chr1 (53-107)||(36602689-36602743)
chr1 (51-104)||(2152160-2152213)
chr1 (51-91)||(26399912-26399952)
chr1 (43-98)||(4363738-4363793)
chr1 (52-107)||(44236647-44236702)
chr1 (51-98)||(47885123-47885170)
chr1 (51-86)||(48282053-48282088)
chr1 (55-89)||(4180714-4180748)
chr1 (43-116)||(13037755-13037828)
chr1 (43-96)||(43372065-43372119)
chr1 (51-120)||(6659400-6659468)
chr1 (50-98)||(10744215-10744264)
chr1 (50-107)||(11639528-11639585)
chr1 (51-120)||(43029516-43029583)
chr1 (51-120)||(50764489-50764558)
chr1 (51-83)||(3244827-3244859)
chr1 (51-107)||(6659602-6659658)
chr1 (51-107)||(18011804-18011859)
chr1 (51-107)||(24857629-24857685)
chr1 (51-107)||(37272707-37272763)
chr1 (59-107)||(44940242-44940290)
chr1 (51-107)||(49125733-49125789)
chr1 (53-105)||(49365905-49365957)
chr1 (51-107)||(50998451-50998507)
[»] chr7 (22 HSPs)
chr7 (43-120)||(22388010-22388087)
chr7 (43-120)||(31341081-31341158)
chr7 (50-107)||(26935664-26935721)
chr7 (50-91)||(45078208-45078249)
chr7 (43-107)||(49060439-49060504)
chr7 (51-107)||(6552385-6552441)
chr7 (51-91)||(27389298-27389338)
chr7 (51-98)||(1431423-1431470)
chr7 (51-82)||(7244626-7244657)
chr7 (50-89)||(29574715-29574754)
chr7 (54-120)||(2221852-2221917)
chr7 (51-97)||(28844395-28844441)
chr7 (50-107)||(5628680-5628737)
chr7 (43-95)||(24973855-24973908)
chr7 (46-91)||(27517960-27518005)
chr7 (50-98)||(30133959-30134005)
chr7 (43-98)||(3241349-3241405)
chr7 (51-79)||(3610855-3610883)
chr7 (50-78)||(7513562-7513590)
chr7 (51-107)||(12242143-12242199)
chr7 (51-87)||(35536026-35536062)
chr7 (51-107)||(39566303-39566359)
[»] scaffold0024 (1 HSPs)
scaffold0024 (51-120)||(27463-27531)
[»] scaffold0654 (1 HSPs)
scaffold0654 (43-90)||(6743-6791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (43-90)||(116662-116710)
[»] scaffold0428 (1 HSPs)
scaffold0428 (50-90)||(3820-3860)
[»] scaffold0044 (1 HSPs)
scaffold0044 (51-83)||(52055-52087)


Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 28842937 - 28843149
Alignment:
Q  16 aatatgtttggaaattggaaactaaacttgttataaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28842937 aatatgtttggaaattggaaactaaacttgttataaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgt 28843036  T
Q  116 ttatcagatatgaaattatatctaacgtgatgttgaaatccttttcatttgaagttgtatacatgcaaaaatcctcattcatcaatgaaaatccggcaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28843037 ttatcagatatgaaattatatctaacgtgatgttgaaatccttttcatttgaagttgtatacatgcaaaaatcctcattcatcaatgaaaatccggcaaa 28843136  T
Q  216 caaataacaaatc 228  Q
    |||||||||||||    
T  28843137 caaataacaaatc 28843149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 41028957 - 41028999
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagc 84  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  41028957 ttgttatagaaatagcttatacataagcacttatatgataagc 41028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 36200073 - 36200020
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    |||||||| ||||||||| ||||||||||||||| |||||| |||||| |||||    
T  36200073 aaatagctgatacataagaacttatatgataagctcttatgttataagcgctta 36200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 49739523 - 49739466
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||| | ||||||||||| |||||||||||  ||||| ||||||||    
T  49739523 aaaatagcttatacatcaccacttatatgaaaagcgcttatgtcataagcgcttaatt 49739466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 2071010 - 2070954
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||| | ||||||| |||||||  |||||| |||||||||||||||    
T  2071010 aaatagcttatacattaacacttatgtgataagtacttatgctataagtgcttaatt 2070954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 16790470 - 16790502
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataa 82  Q
    |||||||||||||||||||||||||||||||||    
T  16790470 aaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 24268270 - 24268326
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| |||||||||||||||| |||||||| |||||||||| || | ||||||||    
T  24268270 aaatagtttatacataagcacttgtatgataaacgcttatgatgtatgcgcttaatt 24268326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 33307695 - 33307727
Alignment:
Q  51 aaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||||||||||||||||||||||    
T  33307695 aaatagcttatacataagcacttatatgataag 33307727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 48528543 - 48528495
Alignment:
Q  42 cttgttata-aaatagcttatacataagcacttatatgataagcgctta 89  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  48528543 cttgttatagaaatagcttatacataagtacttatatgataagctctta 48528495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 1288912 - 1288959
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  1288912 aaatagcgtatacataagcacttatatgataaacgcttacgctataag 1288959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 16790194 - 16790249
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||| ||||| |||||| ||||||||||||||||||| |||||||| |||||    
T  16790194 ttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 27792827 - 27792796
Alignment:
Q  51 aaatagcttatacataagcacttatatgataa 82  Q
    ||||||||||||||||||||||||||||||||    
T  27792827 aaatagcttatacataagcacttatatgataa 27792796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 28843025 - 28842986
Alignment:
Q  65 taagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  28843025 taagcacttatatcataagcgcttatcatataagtgctta 28842986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 29601182 - 29601237
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaat 106  Q
    |||| ||||||||||||| | |||| ||||||||| ||||| ||||||||||||||    
T  29601182 aaattgcttatacataagtagttatgtgataagcgtttatgctataagtgcttaat 29601237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 39971268 - 39971210
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtt 116  Q
    ||||||||||||||||||||||||||| | | ||| |||||| |||||| ||||||||||    
T  39971268 cttatacataagcacttatatgataagtgttgatgttataagagcttaa-ttaaattgtt 39971210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 44374761 - 44374792
Alignment:
Q  53 atagcttatacataagcacttatatgataagc 84  Q
    ||||||||||||||||||||||||||||||||    
T  44374761 atagcttatacataagcacttatatgataagc 44374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 25170684 - 25170630
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||| | |||||||| |||||||||||| ||||| |||| ||||||||||||    
T  25170684 aaaatagttcatacataaacacttatatgattagcgcatatgctataagtgctta 25170630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 25170771 - 25170717
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||| | |||||||| |||||||||||| ||||| |||| ||||||||||||    
T  25170771 aaaatagttcatacataaacacttatatgattagcgcatatgctataagtgctta 25170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 34759642 - 34759679
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgctta 89  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34759642 aaatagcttatacataag-acttatatgataagcgctta 34759679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 1391457 - 1391416
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||||||||| ||| |||||||| ||||||||||||||    
T  1391457 cttatacataagcaattagatgataagtgcttatgatataag 1391416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 10105792 - 10105751
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  10105792 cttattcataagcacttatatggtaagcgcttatgagataag 10105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 20502191 - 20502224
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagc 84  Q
    |||||||||||| |||||||||||||||||||||    
T  20502191 aaatagcttatatataagcacttatatgataagc 20502224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 29094333 - 29094280
Alignment:
Q  54 tagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||| ||||||||||||||| | ||||| |||||| | ||||||    
T  29094333 tagcttatacataaacacttatatgataagtgtttatgctataagcgtttaatt 29094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 35127477 - 35127534
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    |||||||| ||||||| ||||||||||||||||| |||||||| ||||||| ||||||    
T  35127477 ttgttatagaaatagcctatacataagcacttatcatgataagagcttatggtataag 35127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 44284164 - 44284213
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||||| ||||||||||||||| || ||||||||||||| ||||||||    
T  44284164 ttgttatagaaatagcttatacattagtacttatatgataatcgcttatg 44284213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 49772782 - 49772815
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||||||| |||||||||||||||    
T  49772782 aaaatagcttatacataaacacttatatgataag 49772815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9279440 - 9279488
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||| |||||||||||   ||||||||||||||||||||| ||||||    
T  9279440 aaaataacttatacataaatgcttatatgataagcgcttatgctataag 9279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 21862295 - 21862347
Alignment:
Q  55 agcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||  ||||||||||| ||||| || ||||| |||||||||||||||    
T  21862295 agcttatacgcaagcacttataagataaacgtttatgctataagtgcttaatt 21862347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 22232790 - 22232742
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||| ||||||||||||||| |||| |||||||||||| ||||||    
T  22232790 ttgttatataaatagcttatacatgagcatttatatgataagagcttat 22232742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 27291004 - 27291083
Alignment:
Q  42 cttgttata-aaatagcttatacataagcacttatatgataagcgcttatgat-ataagtgcttaatttaaattgtttatc 120  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| ||| |||| | |||||  ||||| ||||||||||||||    
T  27291004 cttgttatagaaataccttatacctaagcacttatatgataaccgcatatgctaataagaacttaa-ttaaattgtttatc 27291083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 30574027 - 30574075
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    ||||||||||||||||||| ||||| |||||||  ||||||||||||||    
T  30574027 aaatagcttatacataagcgcttatcatgataaatgcttatgatataag 30574075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 26516253 - 26516185
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||    
T  26516253 aaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaa-ttaagttgtttatc 26516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 20982241 - 20982297
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20982241 ttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataag 20982297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 40534149 - 40534094
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaat 106  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  40534149 aaatagcttatacataagtccttatatgataagcgcttatgctataagtgtttaat 40534094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 2569817 - 2569883
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgttta 118  Q
    ||||||||||||||||||||||||||||||||  | ||| | |||||| |||||| ||||||||||||    
T  2569817 aaatagcttatacataagcacttatatgataaatgtttacggtataagcgcttaa-ttaaattgttta 2569883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 37611306 - 37611372
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgttta 118  Q
    ||||||||| ||||||||||||||||||| || |  ||||| ||||||||||||| ||||||||||||    
T  37611306 aaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaa-ttaaattgttta 37611372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 37788036 - 37788102
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgttta 118  Q
    ||||||||| ||||||||||||||||||| || |  ||||| ||||||||||||| ||||||||||||    
T  37788036 aaatagcttttacataagcacttatatgacaaccatttatgctataagtgcttaa-ttaaattgttta 37788102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 24084854 - 24084808
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatata 96  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  24084854 aaaatagcttatacatgagcacttatatgataagcttttatgatata 24084808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 29588844 - 29588779
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| ||||||||||||||||||||||||||| | ||| | ||||| |||||| ||||||||    
T  29588844 ttgttatagaaatagcttatacataagcacttatataaaaagtgtttatgctataagcgcttaatt 29588779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 31687978 - 31687933
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||    
T  31687978 atagcttattcataagcacttatatgataagcgcctatgctataag 31687933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 4991057 - 4991105
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||||||| || |||||||||||||| |||||||| ||||||    
T  4991057 aaaatagcttatacacaaacacttatatgataatcgcttatgctataag 4991105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 32172608 - 32172552
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| |||||||||||| ||| ||||||||||||||||| | |||| ||||||||    
T  32172608 aaatagtttatacataagctcttgtatgataagcgcttatgctgtaagcgcttaatt 32172552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 32059702 - 32059770
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||| |||||||||||||||||||||||||||||   ||||||| | ||||||||  |||| |||||||||    
T  32059702 aaaacagcttatacataagcacttatatgataagtatttatgatttgagtgctta--ttaagttgtttatc 32059770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 6738522 - 6738568
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||||||||||||| |||||||||||||| | ||||| |||||    
T  6738522 aaatagcttatacataagtacttatatgataagtgtttatgctataa 6738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 11684379 - 11684345
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagc 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  11684379 aaaatagcttatacattagcacttatatgataagc 11684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 29014712 - 29014666
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatata 96  Q
    |||||||||||||||| | ||||||||||||||||  ||||||||||    
T  29014712 aaaatagcttatacatgaacacttatatgataagcttttatgatata 29014666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 29365575 - 29365541
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagc 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  29365575 aaaatagcttatacatgagcacttatatgataagc 29365541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 35963196 - 35963150
Alignment:
Q  58 ttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||| |||||||||| |||||| |||||||| ||||||||||||    
T  35963196 ttatacacaagcacttatttgataatcgcttatgctataagtgctta 35963150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 6739821 - 6739780
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||| | |||||||||||| |||||||||||||||    
T  6739821 cttatacataaacgcttatatgataaacgcttatgatataag 6739780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 10391309 - 10391276
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||| |||||||||||||||||||    
T  10391309 aaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 10798519 - 10798548
Alignment:
Q  51 aaatagcttatacataagcacttatatgat 80  Q
    ||||||||||||||||||||||||||||||    
T  10798519 aaatagcttatacataagcacttatatgat 10798548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 23999121 - 23999072
Alignment:
Q  42 cttgttataaaat-agcttatacataagcacttatatgataagcgcttat 90  Q
    ||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  23999121 cttgttataaaattagtttatacacaagcacttatatgataagcccttat 23999072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 28776931 - 28776882
Alignment:
Q  50 aaaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    |||||||||||||||||||||||||| |||||||| ||||| | ||||||    
T  28776931 aaaatagcttatacataagcacttatcatgataagtgcttaggctataag 28776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 29115328 - 29115396
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||||||||||||||||||||| ||||||||  | ||||| |||||| || ||| ||||| ||||||||    
T  29115328 aaatagcttatacataagcacttttatgataaatgtttatgctataagcgcgtaa-ttaaagtgtttatc 29115396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 31694471 - 31694422
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataagtgct 102  Q
    ||||||||| |||||||||||||||||||||| | || | ||||||||||    
T  31694471 atagcttattcataagcacttatatgataagcccctaagttataagtgct 31694422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 38819681 - 38819730
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||||| ||||||| ||||||||||| ||||||||||||| |||||||    
T  38819681 ttgttatagaaatagcgtatacataagcccttatatgataagtgcttatg 38819730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 2102940 - 2102892
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataagtgcttaa 105  Q
    |||||||||||||| || ||||||||| ||||||| || ||||||||||    
T  2102940 cttatacataagcatttgtatgataagagcttatgctaaaagtgcttaa 2102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 11153532 - 11153580
Alignment:
Q  55 agcttatacataagcacttatatgataagcgcttatgatataagtgctt 103  Q
    ||||||||||||||||||||||||||||   |||||| |||||| ||||    
T  11153532 agcttatacataagcacttatatgataaagtcttatgctataagcgctt 11153580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11434972 - 11435028
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| |||| ||| ||||| |||||||| |||| ||| |||||||||||    
T  11434972 aaatagcttatatataaacacatatatcataagcgcgtatgctattagtgcttaatt 11435028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 13224393 - 13224353
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataa 82  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  13224393 ttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 36539701 - 36539669
Alignment:
Q  51 aaatagcttatacataagcacttatatgataag 83  Q
    |||||||||| ||||||||||||||||||||||    
T  36539701 aaatagcttacacataagcacttatatgataag 36539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 39105419 - 39105371
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    ||||||||||||||||||| ||||| ||||||||| |||||| ||||||    
T  39105419 aaatagcttatacataagcgcttatcatgataagcacttatgctataag 39105371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 42582867 - 42582819
Alignment:
Q  51 aaatagcttatacataagcactta-tatgataagcgcttatgatataag 98  Q
    ||||||||||||||||||| |||| |||||||| |||||||| ||||||    
T  42582867 aaatagcttatacataagcgcttattatgataaacgcttatgctataag 42582819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 33197345 - 33197412
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattta 109  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||    
T  33197345 ttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaattta 33197412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11393481 - 11393537
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||    
T  11393481 aaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaatt 11393537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11393770 - 11393826
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||||||||||| |||||||  | ||||| |||||||||||||||    
T  11393770 aaatagcttatacataagcacttaaatgataaatgtttatgctataagtgcttaatt 11393826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11410142 - 11410198
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||    
T  11410142 aaatagcttatagataagcacttatatgataaacacttgtgctataagtgcttaatt 11410198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11410431 - 11410487
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||||||||||| |||||||  | ||||| |||||||||||||||    
T  11410431 aaatagcttatacataagcacttaaatgataaatgtttatgctataagtgcttaatt 11410487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 43808532 - 43808485
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  43808532 aaaatagcttatacataaacacttatatgatacgcgcttatgctataa 43808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 38239657 - 38239722
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| ||||||||||||||||| |||||| ||||| || ||||||| || ||||||||||||    
T  38239657 ttgttatagaaatagcttatacataaacacttacatgatgagtgcttatgctacaagtgcttaatt 38239722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 43456799 - 43456856
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||| ||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||    
T  43456799 aaaaaagcttatacattagcacttatgtgataaatgcttatgctataagtgcttaatt 43456856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 43965245 - 43965294
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtg 100  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  43965245 aaatagcttattcataaacacttatatgataagtgcttatgctataagtg 43965294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 25609751 - 25609696
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||||||||||||| || |||| ||||||| || ||||||||||||    
T  25609751 aaatagcttatacataagcacttatgtg-taagagcttatgctagaagtgcttaatt 25609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 35809888 - 35809852
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgct 87  Q
    ||||| |||||||||||||||||||||||||||||||    
T  35809888 aaataacttatacataagcacttatatgataagcgct 35809852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 44606202 - 44606242
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  44606202 aaaatagcttatacataaacacttatataataagcgcttat 44606242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11513855 - 11513800
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||| ||||||||||| | ||||||||||||| ||||||| |||||| ||||||||    
T  11513855 aataacttatacataaacccttatatgataagtgcttatgttataagggcttaatt 11513800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 17221653 - 17221724
Alignment:
Q  49 taaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||| ||| |||||||||| |||||| |||||||  ||||||| ||||||||||||||| | ||| ||||||    
T  17221653 taaactagtttatacataaacacttaaatgataaaggcttatgctataagtgcttaattaagattttttatc 17221724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 29318834 - 29318771
Alignment:
Q  45 gttataaaa-tagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||| ||||||||  ||||||||||||||||||||| |||||| | |||| ||||||||    
T  29318834 gttataaaagtagcttatgtataagcacttatatgataagcacttatgttttaagcgcttaatt 29318771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 31461402 - 31461324
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatca 121  Q
    |||||||| |||||||||||| |||| |||||||||||||  || ||||| || |||||||||| |||| ||||||||||    
T  31461402 ttgttatagaaatagcttatatataaccacttatatgatatacgtttatgctagaagtgcttaa-ttaagttgtttatca 31461324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 40851551 - 40851482
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||||||| || |||||||| | | |||| ||||||||||||||||||| ||||| |||| |||||||||    
T  40851551 aaaatagctaatgcataagcattaacatgacaagcgcttatgatataagtacttaa-ttaagttgtttatc 40851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 43635221 - 43635271
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||  ||| |||||||| ||||||| |||||||||||||||    
T  43635221 cttatacataagcgattacatgataagtgcttatgctataagtgcttaatt 43635271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 9478254 - 9478221
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagc 84  Q
    ||||||||||||||||| ||||||||||||||||    
T  9478254 aaatagcttatacataaacacttatatgataagc 9478221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 10190235 - 10190178
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||| ||||||||||||||||||||||||| | ||  |  |||||||||||||||    
T  10190235 aaaatagtttatacataagcacttatatgataaccactcctactataagtgcttaatt 10190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 3102649 - 3102617
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataa 82  Q
    ||||||||||||||||||||| |||||||||||    
T  3102649 aaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 3235496 - 3235555
Alignment:
Q  50 aaaatagcttatacataagcact--tatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||| |||||||||||||  ||||||||||| | ||||| |||||||||| ||||    
T  3235496 aaaatagctaatacataagcacttatatatgataagtgtttatgctataagtgctcaatt 3235555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 28902033 - 28901993
Alignment:
Q  50 aaaatagcttatacataagcacttat-atgataagcgctta 89  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  28902033 aaaatagcttatacataagcacttataatgataaacgctta 28901993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 33267622 - 33267662
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataa 82  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  33267622 ttgttatagaaatagattatacataagcacttatatgataa 33267662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 35459865 - 35459809
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||| || |||||||||||||| | |||||| |||||| ||| ||||    
T  35459865 aaatagcttatacaaaatcacttatatgataaacacttatgctataagagctgaatt 35459809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 36852420 - 36852380
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||||||||||||||||||||||| || |||||| |||||    
T  36852420 aaatagcttatacataagcacttatctggtaagcgtttatg 36852380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 37766752 - 37766720
Alignment:
Q  52 aatagcttatacataagcacttatatgataagc 84  Q
    ||||||| |||||||||||||||||||||||||    
T  37766752 aatagctaatacataagcacttatatgataagc 37766720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 31884558 - 31884493
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| ||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  31884558 ttgttatagaaataacttatacatatgcacttgtatgataagcgcttatgctataagtgcttaatt 31884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 12972811 - 12972755
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||    
T  12972811 aaatagcttatacataagcacttatatgataaatgcttatgctataagcgcttaatt 12972755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 31875674 - 31875720
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||    
T  31875674 aaatagcttatagataagcacttatatgataagcgcttatgctataa 31875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 14482166 - 14482090
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttat 119  Q
    |||||||| |||||| ||||||||||||||||||||||||||| || ||| ||||||  ||||| |||||||||||||    
T  14482166 ttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaa-ttaaattgtttat 14482090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 28769455 - 28769512
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattta 109  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||| |||||    
T  28769455 aatagcttatacataagcatttatatgataagcacttatgctataaatgcttgattta 28769512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 26716541 - 26716609
Alignment:
Q  42 cttgttataaaa-tagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattta 109  Q
    ||||||||| || |||||||||||||||||||||||| ||||| | ||||| |||| ||||||||||||    
T  26716541 cttgttatagaagtagcttatacataagcacttatataataagtgtttatgctataggtgcttaattta 26716609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 11494271 - 11494216
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||| ||||||||||| ||||| ||||||| ||||||| |||||||    
T  11494271 aatagcttatacatgagcacttatataataagagcttatgctataagtacttaatt 11494216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 14929295 - 14929334
Alignment:
Q  54 tagcttatacataagcacttatatgataagcgcttatgat 93  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  14929295 tagcttatacataagtacttatatgataagcgcttatgat 14929334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 35869792 - 35869737
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaat 106  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  35869792 aaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 35869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 6918987 - 6918941
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatata 96  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||    
T  6918987 aaaatagcttatacataagcacttatatgataaacacttatgctata 6918941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 38036227 - 38036294
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||| |||||||||||||||||||  ||||||||||||| |||| | ||||||  |||||||||||||    
T  38036227 aaatagtttatacataagcacttatagaataagcgcttatgctataggcgcttaa--taaattgtttatc 38036294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 6966861 - 6966816
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  6966861 atagcttatacataagcatttatatgataagtgcttatgttataag 6966816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 11745777 - 11745822
Alignment:
Q  60 atacataagcacttatatgataagcgcttatgatataagtgcttaa 105  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||    
T  11745777 atacataagcacttacatgataagagcttatgatataagtggttaa 11745822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 27320270 - 27320206
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgttt 117  Q
    |||||||||||| ||||||||||| ||||||| | ||||| |||||| |||||| |||||||||||    
T  27320270 aatagcttatacgtaagcacttatgtgataagtgtttatgctataagcgcttaa-ttaaattgttt 27320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 39392767 - 39392832
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| |||||| |||||||||  |||||||||||||||| |||||| ||||| |||||||||    
T  39392767 ttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataaatgcttaatt 39392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 10727152 - 10727096
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||| |||||||||||||||||| | | |||||| ||||| |||||||||    
T  10727152 aaatagcttatgcataagcacttatatgatgaacacttatgctataaatgcttaatt 10727096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11477002 - 11477058
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||||||  |||||||    
T  11477002 aaatagcttatacattagcacttatatgataaaagcttatgctataagcacttaatt 11477058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 21270227 - 21270171
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| |||| |||||| ||||||||| ||||||| ||||| |||||||||||||||    
T  21270227 aaatatcttagacataaccacttatatcataagcgtttatgctataagtgcttaatt 21270171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 30013182 - 30013142
Alignment:
Q  43 ttgttataaaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  30013182 ttgttataaaatagcttaaacataagcacttatataataag 30013142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 34788541 - 34788581
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  34788541 aaaatagcttatacgtaagcatttatatgataagcgcttat 34788581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 30172753 - 30172792
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgctta 89  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  30172753 aaaatagcttatacataagcacttgtatgataagtgctta 30172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 35298593 - 35298624
Alignment:
Q  51 aaatagcttatacataagcacttatatgataa 82  Q
    ||||||||||||||||||||||||||||||||    
T  35298593 aaatagcttatacataagcacttatatgataa 35298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 1117295 - 1117245
Alignment:
Q  57 cttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||| |||||| |||||||||||||||| || ||||||||||| |||||||    
T  1117295 cttacacataatcacttatatgataagcactaatgatataagtacttaatt 1117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 3645931 - 3645977
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||||||||| ||||||||||||||||| | |||||| |||||    
T  3645931 aaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 8536154 - 8536196
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagc 84  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  8536154 ttgttatagaaatagcttatacataagcacttatatgacaagc 8536196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 2107441 - 2107509
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||| |||||||||||| ||||||||||||||||| || | |||||  |||||| |||| |||||||||    
T  2107441 aaataacttatacataagaacttatatgataagcgcataagctataaacgcttaa-ttaagttgtttatc 2107509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 8194053 - 8194121
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||||||||| |||||||||||| ||||| |  ||||||| |||||| |||||| |||| |||||||||    
T  8194053 aaatagcttatccataagcacttaaatgatgaatgcttatgctataagggcttaa-ttaagttgtttatc 8194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 8578567 - 8578530
Alignment:
Q  61 tacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  8578567 tacataagcacttatatgataagtgcttatgctataag 8578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 8603654 - 8603609
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  8603654 atagtttatacataagcacttatatggtaagtgcttatgctataag 8603609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 8823499 - 8823564
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgat-aagcgcttatgatataagtgcttaat 106  Q
    |||||||| |||| ||||||| ||||||||||| ||||| ||| |||||| |||||||||||||||    
T  8823499 ttgttatagaaatggcttatatataagcacttaaatgataaagagcttatcatataagtgcttaat 8823564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 29592648 - 29592693
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    ||||||||||||| ||||||||||||||||||  |||||| |||||    
T  29592648 aatagcttatacaaaagcacttatatgataagaacttatgctataa 29592693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 35534976 - 35535013
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgctt 88  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  35534976 aaatagcttatatataagcacttatatgataaccgctt 35535013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 787225 - 787277
Alignment:
Q  55 agcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| ||||||||||||| ||||||| |  ||||| |||||||||||||||    
T  787225 agcttaaacataagcacttagatgataaacatttatgctataagtgcttaatt 787277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 2833445 - 2833493
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  2833445 aaatagcttattcataagcacttatcatgataagcacttatgctataag 2833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 2840314 - 2840266
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  2840314 aaatagcttattcataagcacttatcatgataagcacttatgctataag 2840266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 2845001 - 2844953
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||||    
T  2845001 aaatagcttattcataagcacttatcatgataagcacttatgctataag 2844953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 8060617 - 8060561
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| |||||||||||||  |||||| | |||| ||||| |||||||||    
T  8060617 aaatagcttatatataagcacttataccataagctcgtatgctataaatgcttaatt 8060561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 8062187 - 8062139
Alignment:
Q  59 tatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||| |||||||| |||||||  |||||| ||||||||    
T  8062187 tatacataagcacttctatgataaacgcttatagtataagcgcttaatt 8062139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 8629073 - 8629033
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataa 82  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  8629073 ttgttatagaaatagcttataaataagcacttatatgataa 8629033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 11813220 - 11813260
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  11813220 aaatatcttgtacataagcacttatatgataagcgtttatg 11813260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 26717222 - 26717174
Alignment:
Q  42 cttgttataaaat-agcttatacataagcacttatatgataagcgctta 89  Q
    ||||||||||||| ||||||| || |||||||||||||||||| |||||    
T  26717222 cttgttataaaattagcttattcagaagcacttatatgataagtgctta 26717174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 40280320 - 40280376
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| |||||| ||| ||||||||||||||||||||  || |||||| ||||||||    
T  40280320 aaataacttatatataggcacttatatgataagcgctattgctataagcgcttaatt 40280376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 486036 - 485980
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  486036 aaatagcatatacataagcacttttatgataagcgcttatgctataagcgcttaatt 485980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 24193541 - 24193472
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||| |||||||||||| |||||||||||||||| ||||| |||||||||| || |||| |||||||||    
T  24193541 aaaataacttatacataagtacttatatgataagcgtttatgctataagtgctcaa-ttaagttgtttatc 24193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 54414903 - 54414865
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54414903 aatagcttatacataagcacttatatgataagcgcttat 54414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 21157724 - 21157667
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||| ||||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  21157724 aaaatagctgatacataagcacttatatgataaacacttctgatacaagtgcttaatt 21157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 43932389 - 43932332
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||| |||||||||||||||| |||||||| | |||||| |||||||||||||||    
T  43932389 aaaatagtttatacataagcacttgtatgataaacacttatgttataagtgcttaatt 43932332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 46796974 - 46796917
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| |||||| ||||||||||||||| |||||| |||||||| ||||||    
T  46796974 aaaatagcttatgcataagaacttatatgataagcacttatgttataagtgattaatt 46796917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 51555973 - 51556034
Alignment:
Q  43 ttgttataa-aatagcttatacataagcacttatatgataagcgcttatgatataagtgctt 103  Q
    ||||||||| |||||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  51555973 ttgttataataatagcttatacataagcacttatatgataaatggttatgttataagtgctt 51556034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 24443993 - 24443938
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaat 106  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  24443993 aaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 24443938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 25548209 - 25548283
Alignment:
Q  42 cttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtt 116  Q
    ||||||||| ||||||||||| ||||||||||| ||||  ||| ||||||||||||| ||||||| ||||||||||    
T  25548209 cttgttatagaaatagcttatgcataagcacttttatggcaagtgcttatgatataattgcttaa-ttaaattgtt 25548283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 4191703 - 4191657
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgctt 88  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||    
T  4191703 ttgttatagaaatagcttatacataagcacttatatgataaacgctt 4191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 11264256 - 11264198
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattta 109  Q
    |||||| |||||||||| ||||||||||||| | ||||||| | |||||||||||||||    
T  11264256 aaatagtttatacataatcacttatatgatatgtgcttatgctttaagtgcttaattta 11264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 53155228 - 53155182
Alignment:
Q  43 ttgttataaaatagcttatacataagcacttatatgataagcgctta 89  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||    
T  53155228 ttgttataaaatagcttatacataagcatgcatatgataagcgctta 53155182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 2980577 - 2980626
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  2980577 ttgttatagaaatagcttatacataagcacttatatgataaacacttatg 2980626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 22684622 - 22684678
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||| |||| ||||||    
T  22684622 ttgttatagaaatagcttatacagaagcatttatatgataagcgcatatggtataag 22684678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 9843781 - 9843820
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  9843781 aaatagcttatacataagcagttatatgataagcacttat 9843820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 19422382 - 19422335
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgctta 89  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19422382 ttgttatagaaataacttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 29601123 - 29601181
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattta 109  Q
    ||||||||||||||||| ||| |||||||| | |||||||  |||||||| ||||||||    
T  29601123 aaatagcttatacataaacacgtatatgatgaccgcttatcttataagtgattaattta 29601181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 46053653 - 46053599
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||| ||||||||||||||  || ||| |||||| ||||||||    
T  46053653 atagcttatacataagtacttatatgataagtactcatgctataagcgcttaatt 46053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 969460 - 969497
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgctt 88  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  969460 aaattgcttatagataagcacttatatgataagcgctt 969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 4243289 - 4243256
Alignment:
Q  58 ttatacataagcacttatatgataagcgcttatg 91  Q
    ||||||| ||||||||||||||||||||||||||    
T  4243289 ttatacacaagcacttatatgataagcgcttatg 4243256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 21731767 - 21731816
Alignment:
Q  50 aaaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    |||||||||||||| ||||||||||| ||||||||||||| || ||||||    
T  21731767 aaaatagcttatacgtaagcacttatcatgataagcgcttgtgctataag 21731816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 47970282 - 47970245
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatga 79  Q
    |||||||| |||||||||||||||||||||||||||||    
T  47970282 ttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 41603506 - 41603534
Alignment:
Q  51 aaatagcttatacataagcacttatatga 79  Q
    |||||||||||||||||||||||||||||    
T  41603506 aaatagcttatacataagcacttatatga 41603534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 44319905 - 44319865
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||| |||||||| ||||||||||||||||| |||||||    
T  44319905 aaatagtttatacatgagcacttatatgataagtgcttatg 44319865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 1180 - 1257
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||||| |||||||||||||||||||||||||||||||  || ||||| ||||||| ||||| |||| |||||||||    
T  1180 ttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaa-ttaagttgtttatc 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 2795 - 2718
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||||| |||||||||||||||||||||||||||||||  || ||||| ||||||| ||||| |||| |||||||||    
T  2795 ttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaa-ttaagttgtttatc 2718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 32386214 - 32386271
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaattt 108  Q
    |||||||||||||||||||||||||||||||| |  ||||  ||||||||||||||||    
T  32386214 aaatagcttatacataagcacttatatgataaacttttatactataagtgcttaattt 32386271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 3217304 - 3217344
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttat 90  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  3217304 aaaatagcttatacataagcacttatatgataatcgcttat 3217344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 31668791 - 31668847
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  31668791 ttgttatagaaatagcttatacataagcacttatatgataattgcttatgctataag 31668847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 4248913 - 4248862
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgct 102  Q
    |||||||||||| |||||||||||||||| ||||||||||| || |||||||    
T  4248913 aaatagcttatatataagcacttatatgacaagcgcttatgctagaagtgct 4248862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 2514657 - 2514604
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    |||||||||||||||||||||||| |||||||||  ||||| |||||| |||||    
T  2514657 aaatagcttatacataagcacttacatgataagcatttatgctataagagctta 2514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 5623125 - 5623072
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||||    
T  5623125 aaatatcttatacataagcacttatatgataaacgattatgctataaatgctta 5623072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 7148622 - 7148569
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||||||||||||||||||||||| |||||| |||||  |||||| |||||    
T  7148622 aaatagcttatacataagcacttatataataagcccttatattataagcgctta 7148569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 10452466 - 10452531
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| |||||||||||||||||||||| ||||||||  | |||||| |||||| ||||||||    
T  10452466 ttgttatagaaatagcttatacataagcactgatatgatagccacttatgctataagagcttaatt 10452531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 31461642 - 31461577
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| ||||||||||||||||||||||||||  ||||| |||||| |||||||  |||||||    
T  31461642 ttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaatt 31461577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 32975933 - 32975865
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| |||||  |||||| |||| |||||||||    
T  32975933 aaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaa-ttaagttgtttatc 32975865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 3155129 - 3155077
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataagtgcttaa 105  Q
    ||||||||||||||| || ||||||||||| |||||||| |||||| ||||||    
T  3155129 atagcttatacataaccatttatatgataaacgcttatgctataagcgcttaa 3155077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 10017417 - 10017369
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||||||||||||||| | | |||||||||||||| ||||||    
T  10017417 aaaatagcttatacataagcactgacacgataagcgcttatgttataag 10017369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 10400229 - 10400186
Alignment:
Q  46 ttataaaatagcttatacataagcacttatatgataagcgctta 89  Q
    |||||||||||||||||||||| || ||||||||||||| ||||    
T  10400229 ttataaaatagcttatacataaacatttatatgataagccctta 10400186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 33068667 - 33068722
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||||| ||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  33068667 ttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataa 33068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 740982 - 741020
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgctt 88  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  740982 aaaatagcttatacataagcatttatatgataaacgctt 741020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 7351723 - 7351769
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    |||||| ||||||||||||| |||||||||||| ||||||| |||||    
T  7351723 aaatagtttatacataagcatttatatgataagagcttatgctataa 7351769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 29249438 - 29249396
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagc 84  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  29249438 ttgttatagaaatagctgatacataagcacttatatgataagc 29249396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 84
Target Start/End: Original strand, 2727975 - 2728004
Alignment:
Q  55 agcttatacataagcacttatatgataagc 84  Q
    ||||||||||||||||||||||||||||||    
T  2727975 agcttatacataagcacttatatgataagc 2728004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 21920022 - 21919973
Alignment:
Q  58 ttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||| |||||||||||||||||||||  |||||| |||||| ||||||||    
T  21920022 ttatgcataagcacttatatgataagtacttatgctataagcgcttaatt 21919973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 21959683 - 21959630
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    ||||||||||||| ||||||||| ||||||||  ||||||| || |||||||||    
T  21959683 aaatagcttatacttaagcacttctatgataaaggcttatgctaaaagtgctta 21959630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 22742330 - 22742281
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  22742330 ttgttatacaaatagcttatagataagaacttatacgataagcgcttatg 22742281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 24631975 - 24632012
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttat 90  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  24631975 atagcttatgcataagcacttatatgataagcgtttat 24632012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 31686559 - 31686600
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatg 91  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  31686559 aaatagcttatacataagcacttatcacgataagcgcttatg 31686600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 1497936 - 1497888
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||| ||||||||||||| |||||||| | ||||| ||||||    
T  1497936 aaaatagcttaaacataagcacttaaatgataagtgtttatgctataag 1497888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 1669902 - 1669946
Alignment:
Q  51 aaatagcttatacataagcacttat-atgataagcgcttatgata 94  Q
    ||||||||||||||||||||||||| |||||||| || |||||||    
T  1669902 aaatagcttatacataagcacttataatgataagagcctatgata 1669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 2027918 - 2027974
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaat 106  Q
    |||||||||||||| ||||  || |||||||||||  |||||||||||| |||||||    
T  2027918 aaaatagcttatacgtaagtgctaatatgataagcatttatgatataagcgcttaat 2027974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 3738024 - 3737968
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||||||||| ||| |||||| | ||| | |||||| ||||||||    
T  3738024 aaatagcttatacataagcactcatacgataagtgtttacgctataagcgcttaatt 3737968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 4247740 - 4247780
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataa 82  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  4247740 ttgttatagaaatagcttatacataagcacttacatgataa 4247780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 8010321 - 8010281
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataa 82  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  8010321 ttgttatagaaatagcttatacctaagcacttatatgataa 8010281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 8349779 - 8349835
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| ||||||| || ||||||||||||||| | ||||| |||||| ||||||||    
T  8349779 aaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaatt 8349835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 14706730 - 14706690
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  14706730 aaatagtttattcataagcacttatttgataagcgcttatg 14706690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 19800545 - 19800601
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| ||| |||||||||||||| ||| ||||| || ||| |||||||||||||||    
T  19800545 aaataacttgtacataagcacttacatggtaagccctcatgctataagtgcttaatt 19800601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 24332898 - 24332858
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||||||||||||||| |||||||| |||||| |||||||    
T  24332898 aaatagcttatacataatcacttataggataagtgcttatg 24332858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 29274344 - 29274400
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||||||||||| || |||||||||  ||| || | |||||||||||||    
T  29274344 aaatagcttatacataagcatttctatgataagaacttgtgttgtaagtgcttaatt 29274400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 33259772 - 33259744
Alignment:
Q  50 aaaatagcttatacataagcacttatatg 78  Q
    |||||||||||||||||||||||||||||    
T  33259772 aaaatagcttatacataagcacttatatg 33259744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 33828602 - 33828554
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||| ||||||    
T  33828602 aaaatagcttacacatatgcacttaaatgataagcgtttatgctataag 33828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 23895300 - 23895235
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| |||||||||||||||||  |||||||||||||| ||||||| | |||||||||||||    
T  23895300 ttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaatt 23895235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 871001 - 870962
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgctta 89  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  871001 aaaatagtttatacataagcacttatatgataagcgctta 870962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 36602743 - 36602689
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||| ||||||||||||||    |||||||||||||||||||||    
T  36602743 atagcttatacataatcacttatatgataaaaatttatgatataagtgcttaatt 36602689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 2152213 - 2152160
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgctta 104  Q
    |||||||||||||||||||||||||||  ||| |||||||| |||| |||||||    
T  2152213 aaatagcttatacataagcacttatattgtaatcgcttatgctataggtgctta 2152160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 26399952 - 26399912
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  26399952 aaatagcttacacataagtacttatatgataagcgcttatg 26399912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 4363738 - 4363793
Alignment:
Q  43 ttgttataaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||||||||||||  ||||||||||||||||||||| ||| | ||||| ||||||    
T  4363738 ttgttataaaatagagtatacataagcacttatatgacaagtgtttatgctataag 4363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 44236647 - 44236702
Alignment:
Q  52 aatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| |||| || ||||||| |||||||| |||||| |||||||||||||||    
T  44236647 aatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaatt 44236702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 47885123 - 47885170
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||| ||||| |||||||| |||||||||||||||||||| ||||||    
T  47885123 aaataacttattcataagcaattatatgataagcgcttatgctataag 47885170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 48282088 - 48282053
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgc 86  Q
    ||||||||| ||||||||||||||||||||||||||    
T  48282088 aaatagcttttacataagcacttatatgataagcgc 48282053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 4180714 - 4180748
Alignment:
Q  55 agcttatacataagcacttatatgataagcgctta 89  Q
    ||||||||||||||||||||||||||||| |||||    
T  4180714 agcttatacataagcacttatatgataagtgctta 4180748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 13037828 - 13037755
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtt 116  Q
    |||||||| ||||||||||||||||||||||||||||| |||  |||| | |||||| | |||| ||||||||||    
T  13037828 ttgttatagaaatagcttatacataagcacttatatgacaagaacttaagttataagcgtttaa-ttaaattgtt 13037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 43372065 - 43372119
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatata 96  Q
    |||||||| ||||||| |||||||||||  |||||||||||||||||||| ||||    
T  43372065 ttgttatagaaatagcctatacataagccattatatgataagcgcttatgctata 43372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 6659468 - 6659400
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||||||||  |||||| |||||||||||||| | |||||  |||||||||||| ||||| ||||||||    
T  6659468 aaatagcttaggcataagaacttatatgataagtgtttatgtaataagtgcttaa-ttaaactgtttatc 6659400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 10744264 - 10744215
Alignment:
Q  50 aaaatagcttatacataagcacttat-atgataagcgcttatgatataag 98  Q
    |||||||||||||||| ||||||| | |||||||||||||||| ||||||    
T  10744264 aaaatagcttatacattagcacttgtcatgataagcgcttatgctataag 10744215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 11639528 - 11639585
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||| ||||||| ||||| |||||||| | ||||  |||||||||||||||    
T  11639528 aaaatagcttacacataaggacttacatgataagtgtttatactataagtgcttaatt 11639585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 43029516 - 43029583
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||| ||||||||||||||| |||| |||| | |||||| || |||||||||| ||||||||||||||    
T  43029516 aaataggttatacataagcactcatat-ataatcacttatgctaaaagtgcttaa-ttaaattgtttatc 43029583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 50764489 - 50764558
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||||||||||||||||| || |||||||||| | |||  ||||| ||||||||| |  |||||||||    
T  50764489 aaatagcttatacataagcaattgtatgataagcacatattctataaatgcttaattaagtttgtttatc 50764558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 3244859 - 3244827
Alignment:
Q  51 aaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||||||||||||| ||||||||    
T  3244859 aaatagcttatacataagcacttacatgataag 3244827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 6659658 - 6659602
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| |||||||||||||||||||||||||  ||| |||   |||||||||||||    
T  6659658 aaatagtttatacataagcacttatatgataattgctgatgccttaagtgcttaatt 6659602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 18011859 - 18011804
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| ||| |||||||||||||||  ||||||  |||||||||||||||    
T  18011859 aaatagcttatagatatgcacttatatgataa-tgcttatattataagtgcttaatt 18011804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 24857629 - 24857685
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| |||||||||| |||||||||||| || |||||||||| |||  |||||||    
T  24857629 aaatagtttatacataaacacttatatgattagtgcttatgatacaagcacttaatt 24857685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 37272707 - 37272763
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| ||||||||||| ||| ||||| || ||  ||||||||||||||||||||||    
T  37272707 aaataacttatacataatcacgtatataatgagtacttatgatataagtgcttaatt 37272763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 44940290 - 44940242
Alignment:
Q  59 tatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| ||| |||||||||||||| ||||| ||||||| |||||||    
T  44940290 tatacatacgcaattatatgataagcgattatgttataagttcttaatt 44940242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 49125789 - 49125733
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| ||||| |||||| |||||||||||||||| ||||| | ||| |||||||||    
T  49125789 aaataacttattcataagaacttatatgataagcgtttatgctgtaaatgcttaatt 49125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 49365905 - 49365957
Alignment:
Q  53 atagcttatacataagcacttatatgataagcgcttatgatataagtgcttaa 105  Q
    |||||||| |||||||||||||||| |||| || ||||| |||||| ||||||    
T  49365905 atagcttacacataagcacttatattataaacgtttatgctataagcgcttaa 49365957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 50998507 - 50998451
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||||||||||| | |||||||||| |||||||  |||| | ||||||||    
T  50998507 aaatagcttatacataagcgcctatatgataaacgcttatactatatgggcttaatt 50998451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 22388010 - 22388087
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||||| ||||||||||| |||||||||||| |||||||| | ||||| |||||| |||||| |||| |||||||||    
T  22388010 ttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaa-ttaagttgtttatc 22388087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 31341158 - 31341081
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||||||  ||||| |||| | |||| |||||||||    
T  31341158 ttgttatacaaatagcttatacataagcatttagatgataagcgcttatgcaataagcgcttga-ttaagttgtttatc 31341081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 26935664 - 26935721
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||||||||| ||| ||||||||||||||||| | |||||| |||||| ||||||||    
T  26935664 aaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatt 26935721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 45078249 - 45078208
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  45078249 aaaatagcttatacataagcacttatatgataaacgtttatg 45078208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 49060504 - 49060439
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||| |||||||||||||||||  |||||||||||||||  ||||  |||||||||||||||    
T  49060504 ttgttatagaaatagcttatacataaatacttatatgataagccattatactataagtgcttaatt 49060439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 6552385 - 6552441
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    ||||| ||| |||||||||||||||||||||||  |||||||| |||||| ||||||    
T  6552385 aaataacttgtacataagcacttatatgataagtacttatgatttaagtgtttaatt 6552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 27389338 - 27389298
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  27389338 aaatagcttatacataaacacttatatgataagcacttatg 27389298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 1431423 - 1431470
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    ||||| ||||||||||| |||||||||||||||| |||||| ||||||    
T  1431423 aaataacttatacataaacacttatatgataagcacttatgctataag 1431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 82
Target Start/End: Complemental strand, 7244657 - 7244626
Alignment:
Q  51 aaatagcttatacataagcacttatatgataa 82  Q
    ||||||||||||||||||||||||||||||||    
T  7244657 aaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 29574715 - 29574754
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgctta 89  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  29574715 aaaatagcttatacataagcatttatatgataaacgctta 29574754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 2221917 - 2221852
Alignment:
Q  54 tagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||| |||||| ||||||| |||| |||||||||||| |||||||| |||| |||| |||||||||    
T  2221917 tagctaatacattagcacttttatggtaagcgcttatgctataagtgtttaa-ttaagttgtttatc 2221852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 28844441 - 28844395
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataa 97  Q
    ||||| ||||||||||||||||||||  ||||||||||||| |||||    
T  28844441 aaatatcttatacataagcacttatacaataagcgcttatgctataa 28844395  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 5628680 - 5628737
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||||||||| ||||||| ||| |||||||||| ||| || |||| ||||||||||    
T  5628680 aaaatagcttatgcataagcccttgtatgataagcccttctgttatatgtgcttaatt 5628737  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 24973908 - 24973855
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatat 95  Q
    |||||||| ||||||||| |||||||||||||||||||| | || |||||||||    
T  24973908 ttgttatagaaatagcttttacataagcacttatatgatcaacgattatgatat 24973855  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 27517960 - 27518005
Alignment:
Q  46 ttataaaatagcttatacataagcacttatatgataagcgcttatg 91  Q
    ||||| || ||||||||||||| |||||||||||||||| ||||||    
T  27517960 ttatagaaaagcttatacataaacacttatatgataagcacttatg 27518005  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 30134005 - 30133959
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  30134005 aaaatagcttatacataaacact--tatgataagcgcttatgctataag 30133959  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 3241405 - 3241349
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttatgatataag 98  Q
    |||||||| ||||||||| || |||||||||||||||||| || |||| ||||||||    
T  3241405 ttgttatagaaatagcttctatataagcacttatatgatatgcacttacgatataag 3241349  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 3610855 - 3610883
Alignment:
Q  51 aaatagcttatacataagcacttatatga 79  Q
    |||||||||||||||||||||||||||||    
T  3610855 aaatagcttatacataagcacttatatga 3610883  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 7513590 - 7513562
Alignment:
Q  50 aaaatagcttatacataagcacttatatg 78  Q
    |||||||||||||||||||||||||||||    
T  7513590 aaaatagcttatacataagcacttatatg 7513562  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 12242199 - 12242143
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||| |||||||||||| |||||  |||||||| ||||||| |||||||| ||||||    
T  12242199 aaatggcttatacataaacacttccatgataagagcttatgctataagtgtttaatt 12242143  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 35536062 - 35536026
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgct 87  Q
    |||||||||||||||||||  ||||||||||||||||    
T  35536062 aaatagcttatacataagcctttatatgataagcgct 35536026  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 39566303 - 39566359
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 107  Q
    |||||| ||| |||||| || |||| |||||||| |||||| |||||||||||||||    
T  39566303 aaatagtttaaacataatcatttatttgataagcacttatgttataagtgcttaatt 39566359  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 27531 - 27463
Alignment:
Q  51 aaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatttaaattgtttatc 120  Q
    ||||| |||||||||||||||||| |||||||| ||||||| |||||| | || |||||| |||||||||    
T  27531 aaataacttatacataagcacttacatgataagagcttatgctataagcg-tttatttaagttgtttatc 27463  T

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Target: scaffold0654 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 6743 - 6791
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  6743 ttgttatagaaatagtttatacataagcacttatatgataagtgcttat 6791  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 116662 - 116710
Alignment:
Q  43 ttgttata-aaatagcttatacataagcacttatatgataagcgcttat 90  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  116662 ttgttatagaaatagtttatacataagcacttatatgataagtgcttat 116710  T

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Target: scaffold0428 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 3860 - 3820
Alignment:
Q  50 aaaatagcttatacataagcacttatatgataagcgcttat 90  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  3860 aaaatagcttacacataagcacttatatgtaaagcgcttat 3820  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 52055 - 52087
Alignment:
Q  51 aaatagcttatacataagcacttatatgataag 83  Q
    |||||||||||||||||||||||||||| ||||    
T  52055 aaatagcttatacataagcacttatatgttaag 52087  T

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