View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18624_high_20 (Length: 224)
Name: NF18624_high_20
Description: NF18624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18624_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 35789919 - 35790030
Alignment:
| Q |
94 |
catactcagcaagatcaccaagttgtctcaagatcccaacaagaccagcaacagcaacaccatcaagaagtgctttagggtcatctctattagcatctct |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35789919 |
catactcagcaagatcaccaagttgtctcaagatcccaacaagaccagcaacagcaacaccatcaagaagtgctttagggtcatctctattagcatctct |
35790018 |
T |
|
| Q |
194 |
gtatagctcagg |
205 |
Q |
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|||||||||||| |
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| T |
35790019 |
gtatagctcagg |
35790030 |
T |
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