View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18626_low_19 (Length: 248)
Name: NF18626_low_19
Description: NF18626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18626_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 24694340 - 24694117
Alignment:
| Q |
10 |
aagaatatagagcaagtaatatcatactactacactaaatggttaaagcaaattcaattttgactgaaaaattatagagaacaaattaaaaataaccaaa |
109 |
Q |
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| T |
24694340 |
aagaatgtagagcaagtaatatcatactactacactaaatggttaaagcaaattcaattttgactgaaaaattatagagaacaaattaaaaataaccaaa |
24694241 |
T |
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| Q |
110 |
gtacaattgattaactatttaaccttttcagattatcaattaattacctcatgcatatgcatgtttcacaattactatacttaaagcccgacaaaccatt |
209 |
Q |
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| T |
24694240 |
gtacagttgattaactatttaaccttttcagattatcaattaattacctcatgcatatgcatgtttcacaattactagacttaaagcccgacaaaccatt |
24694141 |
T |
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| Q |
210 |
ttgtgaatgttggaccacaaaatt |
233 |
Q |
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|||||||||||||||||||||||| |
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| T |
24694140 |
ttgtgaatgttggaccacaaaatt |
24694117 |
T |
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