View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18626_low_4 (Length: 457)
Name: NF18626_low_4
Description: NF18626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18626_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 18 - 447
Target Start/End: Complemental strand, 45360270 - 45359841
Alignment:
| Q |
18 |
caattttcgggtattgttgaaaattgcaggatcatacaaaaataatttattagtatatatcgtagtatgtagatgaagtaactaggtccatatttgatgc |
117 |
Q |
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| T |
45360270 |
caattttcgggtattgttgaaaattgcaggatcatacaaaaataatttattagtatatatcgtagtatgtagatgaagtaactaggtccatatttgatgc |
45360171 |
T |
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| Q |
118 |
ttttgaatgaaccaacagatgagtcttctggagaaattcgtcctttattttgtaccagccattggagcatgttgttcagttttggaaataatgtttctgc |
217 |
Q |
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| T |
45360170 |
ttttgaatgaaccaacagatgagtcttctggagaaattcgtcctttattttgtaccagccattggagcatgttgttcagttttggaaataatgtttctgc |
45360071 |
T |
|
| Q |
218 |
tgaagaaagaacatgatggtcactttgttggatatcataggtggttacatagctgttctgagttgttggtgtgggtaagtttcttgatttttagttgtca |
317 |
Q |
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| T |
45360070 |
tgaagaaagaacatgatggtcactttgttggatatcataggtggttacatagctgttctgagttgttggtgtgggtaagtttcttgatttttagttgtca |
45359971 |
T |
|
| Q |
318 |
gcttctcaagagtttaatgcatttgatttcttgtgatttaaatctccacttatgcctatatgtaggcaaatatcattctcttcacaaagtgtgcaagcat |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45359970 |
gcttctcaagagtttaatgcatttgatttcttgtgatttaaatctccacttatgcctatatgtaggcaaatatcattctcttcacaaagtgtgcaagcat |
45359871 |
T |
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| Q |
418 |
tcattgcatagtcttcaaccgtgtcctatg |
447 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
45359870 |
tcattgcatagtcttcaaccgtgtcttatg |
45359841 |
T |
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