View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18627_high_10 (Length: 338)
Name: NF18627_high_10
Description: NF18627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18627_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 9 - 278
Target Start/End: Original strand, 31539433 - 31539700
Alignment:
| Q |
9 |
cgaagaatatgagatgtgaaaacatcattatagttgaaaatgttttactttcttttgagttaaaggttatcttattagatcaactaaatctcaacttaga |
108 |
Q |
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| T |
31539433 |
cgaagaaaatgagatgtgaaaacatcattatagttgaaaatgttttactttcttttgagttaaaggttatcttattagatcaactaaatctcaacttaga |
31539532 |
T |
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| Q |
109 |
atacatcttctacaattaatcattcagcctatttttctatctaccttcttttttaaaggtgtgtaaggaagaataaacattattatctccaagaatgtga |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
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| T |
31539533 |
atacatcttctacaattaatcattcagcctatttttctatctaccttcttttttcaatgtgtgtaaggaagaataaacattattatctccaagaatgtga |
31539632 |
T |
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| Q |
209 |
tccaccattctaaattcaatcatgactacacaaaacattattgagtcaaaagaaaaggccgtgttatcat |
278 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
31539633 |
tccaccattctaaattcaatcatgact--acaaaacattattgagtcaaaagaaaaggccgtgttatcat |
31539700 |
T |
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