View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18627_high_18 (Length: 235)

Name: NF18627_high_18
Description: NF18627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18627_high_18
NF18627_high_18
[»] chr8 (9 HSPs)
chr8 (3-220)||(43576023-43576241)
chr8 (95-157)||(28152190-28152252)
chr8 (102-158)||(35979329-35979385)
chr8 (102-157)||(35329002-35329057)
chr8 (1-60)||(35979415-35979475)
chr8 (102-157)||(38167742-38167797)
chr8 (102-157)||(38946609-38946664)
chr8 (102-157)||(44025514-44025569)
chr8 (15-58)||(44953714-44953757)
[»] chr6 (10 HSPs)
chr6 (1-67)||(14253139-14253206)
chr6 (102-157)||(6926613-6926668)
chr6 (3-67)||(6675235-6675300)
chr6 (3-67)||(17314937-17315002)
chr6 (15-67)||(24418795-24418847)
chr6 (102-157)||(31090506-31090561)
chr6 (102-157)||(34084763-34084818)
chr6 (3-67)||(26947197-26947261)
chr6 (102-158)||(11368093-11368149)
chr6 (105-157)||(29880686-29880738)
[»] chr2 (4 HSPs)
chr2 (3-67)||(35006337-35006402)
chr2 (102-158)||(932106-932162)
chr2 (102-157)||(16312857-16312912)
chr2 (102-158)||(31639766-31639822)
[»] scaffold0570 (2 HSPs)
scaffold0570 (102-149)||(3774-3821)
scaffold0570 (1-67)||(3844-3911)
[»] chr5 (8 HSPs)
chr5 (102-157)||(15271890-15271945)
chr5 (106-157)||(4622034-4622085)
chr5 (106-157)||(6246101-6246152)
chr5 (102-157)||(10553032-10553087)
chr5 (102-157)||(36294712-36294767)
chr5 (102-157)||(41881065-41881120)
chr5 (117-157)||(19034040-19034080)
chr5 (105-157)||(31499661-31499713)
[»] chr3 (10 HSPs)
chr3 (4-67)||(18167952-18168015)
chr3 (102-157)||(48585495-48585550)
chr3 (99-157)||(7680385-7680443)
chr3 (6-67)||(50507773-50507834)
chr3 (102-149)||(23483293-23483340)
chr3 (99-157)||(52813795-52813853)
chr3 (117-157)||(20049029-20049069)
chr3 (15-55)||(31608280-31608320)
chr3 (105-157)||(49779027-49779079)
chr3 (102-154)||(52343644-52343696)
[»] chr7 (14 HSPs)
chr7 (3-60)||(34012755-34012813)
chr7 (95-157)||(41469463-41469525)
chr7 (1-67)||(37544867-37544934)
chr7 (104-157)||(48873698-48873751)
chr7 (102-157)||(242372-242427)
chr7 (102-157)||(12846703-12846758)
chr7 (102-157)||(24981715-24981770)
chr7 (15-66)||(40524823-40524874)
chr7 (102-157)||(42435677-42435732)
chr7 (102-157)||(43777155-43777210)
chr7 (102-157)||(47541161-47541216)
chr7 (15-56)||(22114119-22114160)
chr7 (15-56)||(40525281-40525322)
chr7 (102-154)||(40863245-40863297)
[»] chr4 (8 HSPs)
chr4 (102-157)||(37829740-37829795)
chr4 (102-157)||(40431114-40431169)
chr4 (99-157)||(24035332-24035390)
chr4 (102-157)||(3025542-3025597)
chr4 (102-157)||(3027317-3027372)
chr4 (102-157)||(11691699-11691754)
chr4 (7-66)||(7818345-7818405)
chr4 (102-158)||(15506548-15506604)
[»] chr1 (10 HSPs)
chr1 (5-67)||(9263494-9263557)
chr1 (102-157)||(6015830-6015885)
chr1 (102-157)||(8113089-8113144)
chr1 (102-157)||(17475188-17475243)
chr1 (102-157)||(51001248-51001303)
chr1 (3-67)||(45926126-45926191)
chr1 (105-157)||(12602715-12602767)
chr1 (93-157)||(26308370-26308434)
chr1 (102-158)||(32562228-32562284)
chr1 (105-157)||(46290939-46290990)
[»] scaffold0003 (1 HSPs)
scaffold0003 (99-157)||(365118-365176)
[»] scaffold0672 (1 HSPs)
scaffold0672 (102-157)||(6850-6905)


Alignment Details
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 43576241 - 43576023
Alignment:
Q  3 ttttgattcacttttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaagtaacaacgaannnnnnnna-aaagagaaagtaacg 101  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||          ||||||||||||||     
T  43576241 ttttgattcacttttattattttatggagattggttgaacatccatgattgtttgtggatgaaagtaacaacaaatttttttttgaaagagaaagtaaca 43576142  T
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatttttccttatatgaagaccatatatcaagacccaattcataaac 201  Q
    |||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43576141 atgaatgaaatcaaggttttaagaaaatttatataaaagaacaattttggtattatttttccttatatgaagaccatatatcaagacccaattcataaac 43576042  T
Q  202 aaacatgcagagtacctac 220  Q
    |||||||||||||||||||    
T  43576041 aaacatgcagagtacctac 43576023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 28152190 - 28152252
Alignment:
Q  95 agtaacgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||| ||||||||||||||| |||||| ||| |||||||||||| || |||||||||||||    
T  28152190 agtaacaatgaatgaaatcaaaattttaagaaaatttatataaaaggacaattttggtattat 28152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 35979385 - 35979329
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    |||||||||||||| ||||||||||| ||||||||||||||  ||||| ||||||||    
T  35979385 atgaatgaaatcaaggttttaaaaaaatttatataaaagaataattttagtattatt 35979329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 35329057 - 35329002
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||| ||| |||||||||||| || |||||||||||||    
T  35329057 atgaatgaaatcaaaattttaagaaaatttatataaaaggacaattttggtattat 35329002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35979475 - 35979415
Alignment:
Q  1 tattttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtgg 60  Q
    |||||||||||| | ||||||||||| | ||||||| |||||||||||||||| |||||||    
T  35979475 tattttgattcagtctttaatcttttttagagattgattgaacatccatgattatttgtgg 35979415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 38167797 - 38167742
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||| ||| ||||||| |||| || |||||||||||||    
T  38167797 atgaatgaaatcaaatttttaagaaaatttatattaaaggacaattttggtattat 38167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 38946609 - 38946664
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  38946609 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 38946664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 44025514 - 44025569
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  44025514 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 44025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 44953714 - 44953757
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgtttgt 58  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  44953714 tttaatcttttatagagattgattgaacatctatgattgtttgt 44953757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14253206 - 14253139
Alignment:
Q  1 tattttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  14253206 tattttgattcactctttaatcttttatagagattgattgaacatccatgattgtttgtgggtgaaag 14253139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 6926613 - 6926668
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||||||||| |||||| || |||||||||||||    
T  6926613 atgaatgaaatcaagattttaaaaaattttatctaaaaggacaattttggtattat 6926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 6675300 - 6675235
Alignment:
Q  3 ttttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||| ||||||||| ||| ||||||| |||||||||||||||| ||||| | ||||||    
T  6675300 ttttgattcactctttaatcttctatagagattgattgaacatccatgattatttgttggtgaaag 6675235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17314937 - 17315002
Alignment:
Q  3 ttttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||| ||||||| |||||  |||||| |||||||| ||||||||||||||| ||||||    
T  17314937 ttttgattcactctttaatcctttataaagattgattgaacattcatgattgtttgtggctgaaag 17315002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 24418847 - 24418795
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||| ||||||    
T  24418847 tttaatcttttattgagattgactgaacatccatgattgtttttgggtgaaag 24418795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 31090561 - 31090506
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  31090561 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 31090506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 34084818 - 34084763
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||| |||||||||||| || |||||| ||||||    
T  34084818 atgaatgaaatcaagattttaaaaaaatttatataaaaggacaattttgatattat 34084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 26947261 - 26947197
Alignment:
Q  3 ttttgattcactttt-aatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||| || |||||| ||| ||||||| ||||| |||||||||||||||||| ||||||    
T  26947261 ttttgattcactcttcaatcttctatagagattgattgaa-atccatgattgtttgtgggtgaaag 26947197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 11368149 - 11368093
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||| |||||||    
T  11368149 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttgatattatt 11368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 29880738 - 29880686
Alignment:
Q  105 aatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  29880738 aatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 29880686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 35006337 - 35006402
Alignment:
Q  3 ttttgattcactttt-aatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||| || |||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  35006337 ttttgattcactcttcaatcttctatagagattgattgaacatccatgattgtttgtggatgaaag 35006402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 932162 - 932106
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    |||| ||||||||| |||| |||||| |||||||||||| || ||||||||||||||    
T  932162 atgagtgaaatcaaggtttcaaaaaaatttatataaaaggacaattttggtattatt 932106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 16312912 - 16312857
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| ||||||||||||||| ||||| |||||||    
T  16312912 atgaatgaaatcaagattttaagaaaatttatataaaagaacaattttagtattat 16312857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 31639822 - 31639766
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    ||||||||||||||  |||||| ||| ||||||||||||  | ||||||||||||||    
T  31639822 atgaatgaaatcaagattttaagaaaatttatataaaagggcaattttggtattatt 31639766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 3821 - 3774
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactatttt 149  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  3821 atgaatgaaatcaaggttttaaaaaattttatataaaagaacaatttt 3774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3911 - 3844
Alignment:
Q  1 tattttgattcac-ttttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    ||||||||||||| |||||||||| ||| ||||||| |||| ||||||| |||||||| |||||||||    
T  3911 tattttgattcactttttaatcttctatagagattgattgaccatccataattgtttgcggatgaaag 3844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 15271945 - 15271890
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  ||||||||||||||||||||||| || |||||||||||||    
T  15271945 atgaatgaaatcaagattttaaaaaattttatataaaaggacaattttggtattat 15271890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 4622034 - 4622085
Alignment:
Q  106 atgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||  |||||||||| |||||||||||| || |||||||||||||    
T  4622034 atgaaatcaagattttaaaaaaatttatataaaaggacaattttggtattat 4622085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 6246101 - 6246152
Alignment:
Q  106 atgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||  |||||| ||| ||||||||||||||| |||||||||||||    
T  6246101 atgaaatcaagattttaagaaaatttatataaaagaacaattttggtattat 6246152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 10553032 - 10553087
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||| |||||||||||| || |||||| ||||||    
T  10553032 atgaatgaaatcaagattttaaaaaaatttatataaaaggacaattttgatattat 10553087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 36294712 - 36294767
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  36294712 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 36294767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 41881120 - 41881065
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  41881120 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 41881065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 19034080 - 19034040
Alignment:
Q  117 gttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||| ||||||||||||| | |||||||||||||    
T  19034080 gttttaaaaaaatttatataaaagagcaattttggtattat 19034040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 31499661 - 31499713
Alignment:
Q  105 aatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  31499661 aatgaaatcaagtttttaagaaaatttatataaaaggacaattttggtattat 31499713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 18168015 - 18167952
Alignment:
Q  4 tttgattcacttttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    ||||||||||||||||||||||||  | |||| |||||||||||||||| ||||||| ||||||    
T  18168015 tttgattcacttttaatcttttatataaattgattgaacatccatgattctttgtgggtgaaag 18167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 48585495 - 48585550
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||| ||| |||||||||||| || |||||||||||||    
T  48585495 atgaatgaaatcaaaattttaagaaaatttatataaaaggacaattttggtattat 48585550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 7680443 - 7680385
Alignment:
Q  99 acgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||||||||  ||||||||  ||||||||||||| || |||||||||||||    
T  7680443 acgatgaatgaaatcaagattttaaaattttttatataaaaggacaattttggtattat 7680385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 50507834 - 50507773
Alignment:
Q  6 tgattcacttttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||||||||| ||   |||||| |||||||| ||||||||||||||| ||||||    
T  50507834 tgattcacttttaatcttctacaaagattgattgaacattcatgattgtttgtgggtgaaag 50507773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 23483293 - 23483340
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactatttt 149  Q
    |||||||||||||| ||||||| ||| ||||||||||||||| |||||    
T  23483293 atgaatgaaatcaaggttttaagaaaatttatataaaagaacaatttt 23483340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 52813795 - 52813853
Alignment:
Q  99 acgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||||||||  |||||| ||| |||||||||||| ||  ||||||||||||    
T  52813795 acgatgaatgaaatcaagattttaagaaaatttatataaaaggacagttttggtattat 52813853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 20049029 - 20049069
Alignment:
Q  117 gttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||| ||| ||||||||||||||| |||||||||||||    
T  20049029 gttttaagaaaatttatataaaagaacaattttggtattat 20049069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 31608280 - 31608320
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgtt 55  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  31608280 tttaatcttctatagagattgattgaacatccatgattgtt 31608320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 49779079 - 49779027
Alignment:
Q  105 aatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  49779079 aatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 49779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 52343644 - 52343696
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtat 154  Q
    ||||||||||||||  |||||| ||| |||||||||||| || ||||||||||    
T  52343644 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtat 52343696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 34012813 - 34012755
Alignment:
Q  3 ttttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtgg 60  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  34012813 ttttgattcactctttaatcttttatagagattgattgaacatctatgattgtttgtgg 34012755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 41469525 - 41469463
Alignment:
Q  95 agtaacgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||| || |||||| ||||||    
T  41469525 agtaacaatgaatgaaatcaaagttttaagaaaatttatataaaaggacaattttgatattat 41469463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37544867 - 37544934
Alignment:
Q  1 tattttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||||| ||| ||||||    
T  37544867 tattttgattcactctttaatcttttatagtgattgattgaacatccataattgtttatgggtgaaag 37544934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 48873751 - 48873698
Alignment:
Q  104 gaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||  |||||||||| ||||||| ||||||| |||||||||||||    
T  48873751 gaatgaaatcaacattttaaaaaaatttatattaaagaacaattttggtattat 48873698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 242372 - 242427
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  242372 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 242427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 12846758 - 12846703
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||| |||||||||||| || |||||| ||||||    
T  12846758 atgaatgaaatcaagattttaaaaaaatttatataaaaggacaattttgatattat 12846703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 24981715 - 24981770
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||||   |||||||||||||||| |||||| ||||||    
T  24981715 atgaatgaaatcaaaattttaaatttttttatataaaagaacaattttgatattat 24981770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 40524823 - 40524874
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaa 66  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||||| |||||    
T  40524823 tttaatcttctacagagattgattgaacatccatgattgtttgtgggtgaaa 40524874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 42435732 - 42435677
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||| ||  |||||||||| |||||||||||| || |||||||||||||    
T  42435732 atgaatgaaattaagattttaaaaaaatttatataaaaggacaattttggtattat 42435677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 43777155 - 43777210
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||| |||||||||||| || ||||| |||||||    
T  43777155 atgaatgaaatcaagattttaaaaaaatttatataaaaggacaatttttgtattat 43777210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 47541161 - 47541216
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  47541161 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 47541216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 22114119 - 22114160
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgttt 56  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||    
T  22114119 tttaatcttctatagagattgattgaacatccatgattgttt 22114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 40525322 - 40525281
Alignment:
Q  15 tttaatcttttatggagattggttgaacatccatgattgttt 56  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||    
T  40525322 tttaatcttctatagagattgattgaacatccatgattgttt 40525281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 40863245 - 40863297
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtat 154  Q
    ||||||||||||||  |||||| ||| |||||||||||| || ||||||||||    
T  40863245 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtat 40863297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 37829740 - 37829795
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||| ||| |||||||||||| || |||||||||||||    
T  37829740 atgaatgaaatcaaaattttaagaaaatttatataaaaggacaattttggtattat 37829795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 40431114 - 40431169
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  ||||||||| ||||||||||||| || |||||||||||||    
T  40431114 atgaatgaaatcaagattttaaaaatttttatataaaaggacaattttggtattat 40431169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 24035332 - 24035390
Alignment:
Q  99 acgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  24035332 acgatgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 24035390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 3025597 - 3025542
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  3025597 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 3025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 3027317 - 3027372
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||||||| |||||||||||  || |||||||||||||    
T  3027317 atgaatgaaatcaagattttaaaaaaatttatataaaaagacaattttggtattat 3027372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 11691699 - 11691754
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||| |||||| ||| |||||||||||  || |||||||||||||    
T  11691699 atgaatgaaatcaaaattttaagaaaatttatataaaaagacaattttggtattat 11691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 7818345 - 7818405
Alignment:
Q  7 gattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaa 66  Q
    |||||||| ||||||||||||| || ||||  ||||||| ||||||||||||||| |||||    
T  7818345 gattcactctttaatcttttatagaaattgactgaacattcatgattgtttgtgggtgaaa 7818405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 15506548 - 15506604
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    |||||||||||||| ||||||| ||| ||||||||||||  | ||||| ||||||||    
T  15506548 atgaatgaaatcaatgttttaagaaaatttatataaaagggcaatttttgtattatt 15506604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 9263494 - 9263557
Alignment:
Q  5 ttgattcact-tttaatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||| |||||| || ||| ||||||| |||||||| ||||||||||||||||||||||    
T  9263494 ttgattcactctttaatattctatagagattgattgaacattcatgattgtttgtggatgaaag 9263557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 6015885 - 6015830
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  6015885 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 6015830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 8113144 - 8113089
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  8113144 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 8113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 17475188 - 17475243
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| ||||||||||||||| |||| ||||||||    
T  17475188 atgaatgaaatcaagattttaagaaaatttatataaaagaacaatttcggtattat 17475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 51001303 - 51001248
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| ||||||||||||||| ||||||| |||||    
T  51001303 atgaatgaaatcaagattttaagaaaatttatataaaagaacaattttgggattat 51001248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 45926126 - 45926191
Alignment:
Q  3 ttttgattcactttt-aatcttttatggagattggttgaacatccatgattgtttgtggatgaaag 67  Q
    |||||||||||| || |||||| ||| ||||||| |||||||| |||||||||||| || ||||||    
T  45926126 ttttgattcactcttcaatcttctatagagattgattgaacatacatgattgtttgcgggtgaaag 45926191  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 12602715 - 12602767
Alignment:
Q  105 aatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||| |||| ||||| |||||||||||| |  |||||||||||||    
T  12602715 aatgaaatcaaaattttcaaaaaatttatataaaaggataattttggtattat 12602767  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 26308370 - 26308434
Alignment:
Q  93 aaagtaacgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||| || ||||||||||||||  |||||| ||| |||||||||||| || |||||||| ||||    
T  26308370 aaagtgacaatgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtgttat 26308434  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 32562228 - 32562284
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattatt 158  Q
    ||||||||||||||  |||||| ||| |||||||||||| || ||||| ||||||||    
T  32562228 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttagtattatt 32562284  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 46290990 - 46290939
Alignment:
Q  105 aatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||| |||||||||| |||||||||||| || |||||| ||||||    
T  46290990 aatgaaatcaaaattttaaaaaa-tttatataaaaggacaattttgatattat 46290939  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 365176 - 365118
Alignment:
Q  99 acgatgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||  |||||| ||||||    
T  365176 acgatgaatgaaatcaaaatttttaaaaaatttatataaaagaataattttgatattat 365118  T

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Target: scaffold0672 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 6905 - 6850
Alignment:
Q  102 atgaatgaaatcaaagttttaaaaaattttatataaaagaactattttggtattat 157  Q
    ||||||||||||||  |||||| ||| |||||||||||| || |||||||||||||    
T  6905 atgaatgaaatcaagattttaagaaaatttatataaaaggacaattttggtattat 6850  T

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