View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18628_low_14 (Length: 244)
Name: NF18628_low_14
Description: NF18628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18628_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3103645 - 3103873
Alignment:
| Q |
1 |
aactataatatgctaattgcatgccttattttttagtgctatagctaggaagtttgtttgttatatttgtattcatatttgttgagagttaagaacttta |
100 |
Q |
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| T |
3103645 |
aactataatatgctaattgcatgccttattttttagtgctatagctaggaagtttgtttgttatatttgtattcatatttgttgagagttaagaacttta |
3103744 |
T |
|
| Q |
101 |
gaagaaaaaatgtatcaatttgtaacctctatgagtttgagaaatgaaagataaaattcctcaaggaaatttgattggactacagaactaattatgctat |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3103745 |
gaagaaaa-atgtatcaatttgtaacctctatgagtttgagaaatgaaagataaaattcctcaaggaaatttgattggactacagaactaattatgctat |
3103843 |
T |
|
| Q |
201 |
tgctaatctagttacattatgcttaatgtg |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
3103844 |
tgctaatctagttacattatgcttaatgtg |
3103873 |
T |
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