View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18629_low_15 (Length: 334)

Name: NF18629_low_15
Description: NF18629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18629_low_15
NF18629_low_15
[»] chr3 (15 HSPs)
chr3 (119-324)||(8431480-8431686)
chr3 (252-315)||(31525360-31525424)
chr3 (255-315)||(43073118-43073178)
chr3 (261-315)||(28934808-28934861)
chr3 (255-324)||(10454279-10454349)
chr3 (261-313)||(28956952-28957005)
chr3 (246-315)||(44656300-44656369)
chr3 (255-315)||(53349401-53349462)
chr3 (255-313)||(9358823-9358883)
chr3 (255-313)||(47820897-47820957)
chr3 (261-324)||(20701152-20701215)
chr3 (261-315)||(42881885-42881939)
chr3 (255-307)||(46750212-46750263)
chr3 (255-314)||(55166895-55166955)
chr3 (261-324)||(52076066-52076129)
[»] chr1 (12 HSPs)
chr1 (177-325)||(31833817-31833965)
chr1 (252-315)||(12172951-12173015)
chr1 (255-321)||(47028931-47028998)
chr1 (255-324)||(42442072-42442142)
chr1 (255-313)||(43268679-43268739)
chr1 (261-315)||(41955961-41956016)
chr1 (255-313)||(46757306-46757365)
chr1 (167-313)||(19472716-19472857)
chr1 (261-324)||(8463033-8463097)
chr1 (255-324)||(26384960-26385030)
chr1 (255-315)||(26990601-26990662)
chr1 (256-313)||(43460698-43460758)
[»] chr2 (4 HSPs)
chr2 (249-324)||(38908663-38908738)
chr2 (255-324)||(41419617-41419687)
chr2 (255-315)||(14732412-14732473)
chr2 (255-313)||(41378272-41378332)
[»] chr7 (11 HSPs)
chr7 (255-324)||(46691911-46691981)
chr7 (261-315)||(49035928-49035983)
chr7 (261-315)||(22197675-22197729)
chr7 (261-315)||(22240092-22240146)
chr7 (258-315)||(41702867-41702925)
chr7 (167-221)||(30655761-30655815)
chr7 (252-313)||(31424847-31424912)
chr7 (261-315)||(36615874-36615927)
chr7 (255-307)||(43397640-43397692)
chr7 (261-315)||(33320710-33320765)
chr7 (261-324)||(30655662-30655727)
[»] chr8 (8 HSPs)
chr8 (261-315)||(10124866-10124922)
chr8 (255-315)||(5200554-5200615)
chr8 (255-324)||(40930893-40930961)
chr8 (255-315)||(24200693-24200753)
chr8 (262-324)||(13959284-13959347)
chr8 (255-324)||(25829329-25829399)
chr8 (255-313)||(30836212-30836272)
chr8 (255-314)||(7845080-7845138)
[»] chr5 (8 HSPs)
chr5 (246-315)||(25539810-25539879)
chr5 (261-313)||(2292168-2292222)
chr5 (255-315)||(3677864-3677924)
chr5 (261-324)||(819193-819254)
chr5 (255-326)||(22887211-22887282)
chr5 (255-312)||(9931877-9931935)
chr5 (255-324)||(23173037-23173107)
chr5 (261-315)||(10431063-10431118)
[»] chr6 (8 HSPs)
chr6 (255-313)||(10246910-10246969)
chr6 (255-313)||(15859093-15859154)
chr6 (167-221)||(11546685-11546739)
chr6 (255-314)||(33984753-33984814)
chr6 (254-324)||(6575720-6575791)
chr6 (261-314)||(33112790-33112844)
chr6 (167-221)||(34761080-34761134)
chr6 (261-313)||(11546772-11546825)
[»] chr4 (4 HSPs)
chr4 (255-313)||(32183275-32183336)
chr4 (263-324)||(47571634-47571694)
chr4 (261-324)||(16572074-16572138)
chr4 (256-306)||(42390855-42390906)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 119 - 324
Target Start/End: Complemental strand, 8431686 - 8431480
Alignment:
Q  119 ggttgctgctgtctttttggtgtggtgctgcagttttggctgttatgagtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtca 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8431686 ggttgctgctgtctttttggtgtggtgctgtagttttggctgttatgagtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtca 8431587  T
Q  219 -ttatttttgtgtccggtagttagtgccttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgt 317  Q
     || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8431586 tttttttttttgaccggtagttagtgccttagtgttggggtggtttttaaggggtttttgttcgagccggtgttttgttgcaaccgatttccccttgtgt 8431487  T
Q  318 ttatttt 324  Q
    |||||||    
T  8431486 ttatttt 8431480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 31525360 - 31525424
Alignment:
Q  252 ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  31525360 ttagggtggtttttaaggggtttttgttcgagccgttgtttgtgtggcaaccgatttccccttgt 31525424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 43073178 - 43073118
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  43073178 gggtggtttttaaggggtttttgttcgagccggtgttttaaggcaaccgatttccccttgt 43073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 28934861 - 28934808
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28934861 tttttaaggggtttttgttcgagccggtg-tttgtggcaaccgatttccccttgt 28934808  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 10454279 - 10454349
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccgg-tgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||| ||||||| | | |||||||||||||||||||||||| | ||||||    
T  10454279 gggtggtttttaaggggtttttgtttgagccggctttcttgtggcaaccgatttccccttgtatgtatttt 10454349  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 28956952 - 28957005
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28956952 ttttaaaggggtttttgttcgagccggtgtttgtgtggcaaccgatttcccctt 28957005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 44656369 - 44656300
Alignment:
Q  246 ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||||| | ||||||||||||| |||||||    
T  44656369 ttagttttagggtggtttttaagggatttttgttcgagtctgtgttatatggcaaccgattttcccttgt 44656300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 53349401 - 53349462
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||||||| |||||||    
T  53349401 gggtggtttttaaggggtttttgtttgagccggtgtttgtgcggcaaccgattttcccttgt 53349462  T

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Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 9358883 - 9358823
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  9358883 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 9358823  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 47820897 - 47820957
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  47820897 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 47820957  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 20701152 - 20701215
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||||||||||||| | ||||||    
T  20701152 tttttaaggggtttttgttcgagccgtagttgtgtggcaatcgatttccccttgtttgtatttt 20701215  T

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Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 42881885 - 42881939
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  42881885 tttttaaggcgtttttgtttgagccggtgtattgtggcaatcgatttccccttgt 42881939  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 46750212 - 46750263
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgattt 307  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  46750212 gggtggtttttaaggg-tttttgttcgaaccggtgttttgcggcaaccgattt 46750263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 55166955 - 55166895
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 314  Q
    |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  55166955 gggtggtttttaaggggtttttgttcgagccaaagtttgtgcggcaaccgatttccccttg 55166895  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 52076066 - 52076129
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||   |||||| |||||||||||| |||||||| | ||||||    
T  52076066 tttttaaggggtttttgttcgagcgtttgttttatggcaaccgattaccccttgtttgtatttt 52076129  T

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Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 31833817 - 31833965
Alignment:
Q  177 aggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggtttttaaggggttttt 276  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  31833817 aggggtatgcttgcggattgccatttgtatatgtctgcgtcattacttttgtgactggtagtttgtgccttagtgttggggtggtttttaaggggttttt 31833916  T
Q  277 gttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttc 325  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| |||||    
T  31833917 gttcgagccggtgttatgtggcaaccgattttcccttgtattttttttc 31833965  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 12172951 - 12173015
Alignment:
Q  252 ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  12172951 ttagggtggtttttaaggggtttttgttcgagctgatgtttgtgtggcaaccgatttccccttgt 12173015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 47028931 - 47028998
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgtgtttat 321  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  47028931 gggtagtttttaaggggtttttgttcgagccggtgtttttgcggcaaccgatttccccttgtatttat 47028998  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 42442142 - 42442072
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||| | ||||||    
T  42442142 gggtggtttttaaggggtttttgttcgagtcggtgttttaatggcaaccgatttcccgttgtttgtatttt 42442072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 43268739 - 43268679
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  43268739 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 43268679  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 41956016 - 41955961
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgt 315  Q
    |||||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  41956016 tttttaagggatttttgttcgagccggtgttattatggcaaccgatttccccttgt 41955961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 46757306 - 46757365
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttcccctt 313  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  46757306 gggtggtttttaaagggtttttgttcgagctggtgttattgtggcaatcgatttcccctt 46757365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 313
Target Start/End: Original strand, 19472716 - 19472857
Alignment:
Q  167 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggttttt- 265  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||| ||||||||||| | |||||       ||  || ||||||| |  |||||||||||     
T  19472716 gtgttgatgcaggggtatgcttgtggtctgtcacttgtatatgcctgcgtcattactcttgtg-------gtgtgttccttagtttatgggtggttttta 19472808  T
Q  266 aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||| |||||||||||||||| |||| | ||||||| |||||||||||    
T  19472809 aagggatttttgttcgagccggagtttgtatggcaactgatttcccctt 19472857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 8463097 - 8463033
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||| ||||||| | ||||||    
T  8463097 tttttaaggggtttttgttcgagccgacgtttttgtggcaaccgattttcccttgtatgtatttt 8463033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 26384960 - 26385030
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||| ||||||| |||| ||||||| | || ||||||||||||| |||| | ||||||    
T  26384960 gggtggtttttaagggggttttgtttgagctggtgtttgtatgacaaccgatttccctttgtttgtatttt 26385030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 26990601 - 26990662
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgt 315  Q
    |||||||||||||||| |||||||| ||||||||| || || ||||| |||||| |||||||    
T  26990601 gggtggtttttaagggatttttgtttgagccggtgcttgtgcggcaatcgattttcccttgt 26990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 43460698 - 43460758
Alignment:
Q  256 ggtggttttt-aaggggtttttgttcgagccggtgttttg--tggcaaccgatttcccctt 313  Q
    |||||||||| |||||||||||||||||| | ||||||||  | |||||||||||||||||    
T  43460698 ggtggtttttgaaggggtttttgttcgagtcagtgttttgtatcgcaaccgatttcccctt 43460758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 38908663 - 38908738
Alignment:
Q  249 gtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||    
T  38908663 gtgttggggtggtttttaaggggtttttgttcgaaccggtgttttgtggctaccgattttcccttgtatttatttt 38908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 41419617 - 41419687
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||| ||||    
T  41419617 gggtggtttttaaggggtttttgttcgagtcggtgttattatggcaaccgatttccccttgtatttgtttt 41419687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 14732473 - 14732412
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggt-gttttgtggcaaccgatttccccttgt 315  Q
    |||||||||||||||||||||||||||||| |||  ||||| || |||||||||||||||||    
T  14732473 gggtggtttttaaggggtttttgttcgagctggtatttttgcggtaaccgatttccccttgt 14732412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 41378332 - 41378272
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  41378332 gggtggtttttaaaggggtttttattcgagccggagtttgtgtggcaaccgatttcccctt 41378272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 46691981 - 46691911
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  46691981 gggtggtttttaaggggtttttgttcgagccggtgtttatgtggcaaccgatttccccttgtatgtatttt 46691911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 49035983 - 49035928
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  49035983 tttttaaggggtttttgttcgaaccggtgtttatgtggcaaccgatttccccttgt 49035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 22197675 - 22197729
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  22197675 tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgt 22197729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 22240146 - 22240092
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  22240146 tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgt 22240092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 41702867 - 41702925
Alignment:
Q  258 tggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  41702867 tggtttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 41702925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 30655815 - 30655761
Alignment:
Q  167 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta 221  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||    
T  30655815 gtgttgacgcaggggtatgcttgtggattgtcatttgtatatgccggcgtcatta 30655761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 31424912 - 31424847
Alignment:
Q  252 ttagggtggttttt--aaggggtttttgttcgagccggtgttttg--tggcaaccgatttcccctt 313  Q
    ||||||||||||||  |||||||||||| |||||||||||||| |  |||||||||||||||||||    
T  31424912 ttagggtggttttttaaaggggtttttgatcgagccggtgtttcgaatggcaaccgatttcccctt 31424847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 36615927 - 36615874
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||| |||||||||||||||| || |||| ||||||||||||||||||||||    
T  36615927 tttttaaagggtttttgttcgagctggagttt-gtggcaaccgatttccccttgt 36615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 43397640 - 43397692
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgattt 307  Q
    ||||||||||| | |||||||||||||||| | |||||||||||||| |||||    
T  43397640 gggtggttttttaagggtttttgttcgagcagttgttttgtggcaacagattt 43397692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 33320710 - 33320765
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||||||||| |||||||||||||||||||| |  ||||||| ||||||||||||    
T  33320710 tttttaagggggttttgttcgagccggtgtttgtaaggcaaccaatttccccttgt 33320765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 30655727 - 30655662
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtg--gcaaccgatttccccttgtgtttatttt 324  Q
    |||||||| |||||||||||||| || | |||||||  ||||||||||||||||||| | ||||||    
T  30655727 tttttaagaggtttttgttcgagtcgatattttgtgtggcaaccgatttccccttgtttgtatttt 30655662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 10124866 - 10124922
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttccccttgt 315  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  10124866 tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttccccttgt 10124922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 5200615 - 5200554
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  5200615 gggtgatttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgattttcccttgt 5200554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 40930961 - 40930893
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||| |||||||||||||||| || |||||| |||||||||||||||||| | ||||||    
T  40930961 gggtggtttttaaggagtttttgttcgagccgttg-tttgtgacaaccgatttccccttgtttgtatttt 40930893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 24200753 - 24200693
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgt 315  Q
    |||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||    
T  24200753 gggtggtttttaagtg-tttttgttcgagccggtgtttttgcggcaaccgatttccccttgt 24200693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 13959347 - 13959284
Alignment:
Q  262 ttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || |||| | ||||||    
T  13959347 ttttaaggggtttttgtttgagccggtgtttatgtggcaaccgattttcctttgtttgtatttt 13959284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 25829399 - 25829329
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    |||||||||||||||||||||| ||| ||||||||||| |  || ||||||||||||||||| | ||||||    
T  25829399 gggtggtttttaaggggtttttattcaagccggtgtttatagggaaaccgatttccccttgtttgtatttt 25829329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 30836272 - 30836212
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||||||| ||||||||||||||||||||| ||| || ||||| ||||||||||||    
T  30836272 gggtggtttttaaaggggtttttgttcgagccggtatttgtgcggcaatcgatttcccctt 30836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 7845080 - 7845138
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 314  Q
    ||||||||||||||||| ||  |||||||||||||||  ||| ||||||||||||||||||    
T  7845080 gggtggtttttaaggggatt--gttcgagccggtgttaatgttgcaaccgatttccccttg 7845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 25539810 - 25539879
Alignment:
Q  246 ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||    
T  25539810 ttagttttggggtggtttttaaggggtttttgttcgagccgatgtttgatggcaaccgatttcctcttgt 25539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 2292168 - 2292222
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttcccctt 313  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  2292168 tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttcccctt 2292222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 3677924 - 3677864
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt 315  Q
    ||||||||||||||||||||||||| ||||| |||| ||| |||||||||||  |||||||    
T  3677924 gggtggtttttaaggggtttttgtttgagccagtgtattgcggcaaccgattgtcccttgt 3677864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 819254 - 819193
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||| ||||||||    
T  819254 tttttaaggggtttttgttcgagttggtg-tttgtggcaaccgatttccctttgt-tttatttt 819193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 22887211 - 22887282
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttct 326  Q
    ||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||| | ||| ||||||    
T  22887211 gggtggtttttaaggggtttttgtttgaacctgtcttttgtggcaactgattttcccttatattttttttct 22887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 9931935 - 9931877
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct 312  Q
    ||||||||||| ||| |||||||||||||| ||||||| || |||||||||||||||||    
T  9931935 gggtggtttttgaggtgtttttgttcgagctggtgtttgtgcggcaaccgatttcccct 9931877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 23173107 - 23173037
Alignment:
Q  255 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||| |||||||||||||||||||| |  |||||| |||||| |||||| | ||||||    
T  23173107 gggtggtttttaagggggttttgttcgagccggtgtttatagggcaactgatttctccttgtttgtatttt 23173037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 10431063 - 10431118
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt 315  Q
    |||||| | |||||||||||||| |||||||| |||||||||||||||| ||||||    
T  10431063 tttttatgaggtttttgttcgagtcggtgtttgtgtggcaaccgatttctccttgt 10431118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 10246910 - 10246969
Alignment:
Q  255 gggtggtttttaa-ggggtttttgttcgagccggtgttttgtggcaaccgatttcccctt 313  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||| |||||    
T  10246910 gggtggtttttaaaggggtttttgttcgagccggtgttgtgtgacaaccgattttccctt 10246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 15859093 - 15859154
Alignment:
Q  255 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    |||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  15859093 gggtggttttttaaaggggtttttgttcgagccggtgtttgtttggcaaccgatttcccctt 15859154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 11546685 - 11546739
Alignment:
Q  167 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta 221  Q
    ||||||| |||||||||| | || |||||||||| ||||||||||||||||||||    
T  11546685 gtgttgacgcaggggtattcatgaggattgtcatatgtatatgtctgcgtcatta 11546739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 33984753 - 33984814
Alignment:
Q  255 gggtggttttt-aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 314  Q
    ||||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||||||    
T  33984753 gggtggtttttgaaggggtttttgttcgaaccagtgtttgtatggcaaccgatttccccttg 33984814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 6575720 - 6575791
Alignment:
Q  254 agggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||| ||||||||||||||||| ||||| | || |||| ||||| || |||||| ||||||    
T  6575720 agggtggtttttaagaggtttttgttcgagccgatgtttgtatgacaactgattttcctttgtgtgtatttt 6575791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 33112844 - 33112790
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 314  Q
    |||||||||||||||||||||||||   |||| | ||||||||||||||||||||    
T  33112844 tttttaaggggtttttgttcgagccaaagtttgtatggcaaccgatttccccttg 33112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 34761080 - 34761134
Alignment:
Q  167 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta 221  Q
    ||||||| |||||||||| | || |||||||||| |||||||| |||||||||||    
T  34761080 gtgttgacgcaggggtattcatgaggattgtcatatgtatatgcctgcgtcatta 34761134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 11546772 - 11546825
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    ||||||||| |||||||||||||||||||||| | || ||||||||||| ||||    
T  11546772 tttttaaggagtttttgttcgagccggtgtttgtatgacaaccgatttctcctt 11546825  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 32183275 - 32183336
Alignment:
Q  255 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccctt 313  Q
    |||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  32183275 gggtggttttttaaaggggtttttgttcgagccggtgtttgtatggcaaccgatttcccctt 32183336  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 47571694 - 47571634
Alignment:
Q  263 tttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||| ||||||| ||||||||    
T  47571694 tttaaggggtttttgtttgagccggtg-tttgtggcaaccaattttcccttgtatttatttt 47571634  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 16572074 - 16572138
Alignment:
Q  261 tttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttatttt 324  Q
    ||||||| ||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||||    
T  16572074 tttttaaaggggttttgttcgaaccggtgtttttgcggcaaccgatttccccttgtatttatttt 16572138  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 42390906 - 42390855
Alignment:
Q  256 ggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatt 306  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  42390906 ggtggtttttaaggggtttttgtttgagccggtgttttagcggcaaccgatt 42390855  T

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