View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18632_high_2 (Length: 690)

Name: NF18632_high_2
Description: NF18632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18632_high_2
NF18632_high_2
[»] chr8 (1 HSPs)
chr8 (1-675)||(37085264-37085938)


Alignment Details
Target: chr8 (Bit Score: 635; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 635; E-Value: 0
Query Start/End: Original strand, 1 - 675
Target Start/End: Original strand, 37085264 - 37085938
Alignment:
Q  1 accaatgttttccatacacaacagatcccaaactaacaagcacaaccgaaatactaaactttttcattggggagctttggtttgtcaaagatatacttgt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085264 accaatgttttctatacacaacagatcccaaactaacaagcacaaccgaaatactaaactttttcattggggagctttggtttgtcaaagatatacttgt 37085363  T
Q  101 attggaggtgtctagaactcccgtttcaaatgtactattgagtttctgtcctaaatctgagtgcatttgcagattgacaccaaacaatttataaccatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085364 attggaggtgtctagaactcccgtttcaaatgtactattgagtttctgtcctaaatctgagtgcatttgcagattgacaccaaacaatttataaccatca 37085463  T
Q  201 agtgtaccggaatttcgaacattagttggacatggtgaaggttcattttccaagacagacataccaccagcactaagttctatgttgtctcgttcttttc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085464 agtgtaccggaatttcgaacattagttggacatggtgaaggttcattttccaagacagacataccaccagcactaagttctatgttgtctcgttcttttc 37085563  T
Q  301 tgatctctgcactagtaactttttccgcatatggaacacactcattgtgatggatttcggttatatttagcaaagaattttcaggtttatcagagatatc 400  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37085564 tgatctctgcactagtaactttttccgcatatggaacacacttattgtgatggatttcggctatatttagcaaagaattttcaggtttatcagagatatc 37085663  T
Q  401 accaatattcaaatacaaagaacttcccttatcctccttaactttattttccgtgaccaacatagtatcattcatgttgtccatatcactagtcagatcc 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37085664 accaatattcaaatacaaagaacttcccttatcctccttaactttattgtccatgaccaacatagtatcattcatgttgtccatatcaccagtcagatcc 37085763  T
Q  501 acataaggtgtacgagaagtttcatgatgagactctgaatggaccaactctgaagaaatgtgactgtgaggactgctaggtaaatttgaatttaacctct 600  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085764 acataaggtgtacgagaagtttcatgatgagcctctgaatggaccaactctgaagaaatgtgactgtgaggactgctaggtaaatttgaatttaacctct 37085863  T
Q  601 cattagttccagtacaagaaggcgatcttttccattctttgtaattctcagttttgcacatgactctctccatat 675  Q
    ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37085864 cataagttcctgtacaagaaggcgatattttccattctttgtaattctcagttttgcacatgactctctccatat 37085938  T

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