View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18632_low_13 (Length: 320)
Name: NF18632_low_13
Description: NF18632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18632_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 6 - 303
Target Start/End: Original strand, 28232402 - 28232700
Alignment:
| Q |
6 |
gtatattattctgacaattcgtcaaaaaaggtgcatggttgtgattattaattaattagtacacatatgctagttggctaaataaggaatcccaatatta |
105 |
Q |
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| T |
28232402 |
gtatattatgctgacaattcgtcaaaaaaggtgcatggttgtgattattaattaattagtacacatatgctagttggctaaataaggaatcccaatatta |
28232501 |
T |
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| Q |
106 |
gtatatttt-ttatgtggtgttttgaccaagtaaaatgaaatgtggagtcagaaaaacttggagtttaataaacctgacatcacatggatgagattccaa |
204 |
Q |
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| T |
28232502 |
gtatatttttttatgtggtgttttgaccaagtaaaatgaaatgtggagtcagaaaaacttggagtttaataaacctgacatcacatggatgagattccaa |
28232601 |
T |
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| Q |
205 |
atttccaattcatcattaaggaattaattgtgcagatgcaggtcaattcaatcatttattagaataccctaaaaaattaattggatacctagggtgatg |
303 |
Q |
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| T |
28232602 |
atttccaattcatcattaaggaattaattgtgcagatgcaggtcaattcaatcatttattagaataccctataaaattaattggatacctagggtgatg |
28232700 |
T |
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