View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18632_low_15 (Length: 309)

Name: NF18632_low_15
Description: NF18632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18632_low_15
NF18632_low_15
[»] chr3 (45 HSPs)
chr3 (14-292)||(50015818-50016107)
chr3 (149-228)||(44014711-44014790)
chr3 (136-182)||(14548680-14548726)
chr3 (135-228)||(19679241-19679334)
chr3 (145-198)||(47584524-47584577)
chr3 (160-220)||(27294435-27294495)
chr3 (231-290)||(41028939-41028998)
chr3 (227-290)||(44374728-44374791)
chr3 (149-227)||(3776304-3776382)
chr3 (160-226)||(22667492-22667558)
chr3 (160-226)||(22724131-22724197)
chr3 (228-290)||(33307665-33307727)
chr3 (136-181)||(25182947-25182992)
chr3 (149-218)||(33880480-33880549)
chr3 (135-220)||(40880869-40880954)
chr3 (133-189)||(2304223-2304279)
chr3 (132-220)||(3775772-3775860)
chr3 (150-218)||(31365111-31365178)
chr3 (134-190)||(34707447-34707503)
chr3 (149-225)||(43948732-43948808)
chr3 (133-225)||(45541633-45541725)
chr3 (173-229)||(51929843-51929899)
chr3 (153-220)||(20210849-20210916)
chr3 (151-218)||(31365232-31365298)
chr3 (228-263)||(34318038-34318073)
chr3 (149-188)||(50211813-50211852)
chr3 (230-289)||(51278244-51278303)
chr3 (164-227)||(53891809-53891872)
chr3 (152-214)||(25699125-25699187)
chr3 (236-289)||(31526311-31526362)
chr3 (154-220)||(37138365-37138431)
chr3 (149-227)||(41057233-41057311)
chr3 (149-227)||(49465579-49465657)
chr3 (231-288)||(905058-905115)
chr3 (228-289)||(16790441-16790502)
chr3 (139-216)||(24281115-24281192)
chr3 (149-182)||(28283558-28283591)
chr3 (134-199)||(37273197-37273262)
chr3 (134-227)||(43115119-43115212)
chr3 (228-280)||(1395604-1395656)
chr3 (149-197)||(2413623-2413671)
chr3 (230-290)||(3015936-3015995)
chr3 (227-290)||(35127455-35127519)
chr3 (230-290)||(38462204-38462264)
chr3 (149-189)||(44295605-44295645)
[»] chr8 (48 HSPs)
chr8 (149-228)||(16162838-16162917)
chr8 (133-220)||(2487929-2488016)
chr8 (227-290)||(14482125-14482188)
chr8 (133-211)||(30191071-30191149)
chr8 (134-217)||(6950385-6950468)
chr8 (152-199)||(12833441-12833488)
chr8 (149-220)||(12851254-12851327)
chr8 (230-290)||(39392748-39392808)
chr8 (152-202)||(1664450-1664500)
chr8 (149-199)||(7918723-7918773)
chr8 (134-216)||(11569382-11569464)
chr8 (148-190)||(24558928-24558970)
chr8 (133-199)||(39881663-39881729)
chr8 (129-227)||(43504809-43504907)
chr8 (150-227)||(9700080-9700157)
chr8 (133-189)||(3161575-3161631)
chr8 (135-179)||(8629520-8629564)
chr8 (233-289)||(42508653-42508709)
chr8 (149-225)||(44236739-44236815)
chr8 (160-199)||(1561366-1561405)
chr8 (134-225)||(7008662-7008752)
chr8 (134-189)||(14949929-14949984)
chr8 (149-220)||(26473646-26473717)
chr8 (129-220)||(45071432-45071523)
chr8 (136-199)||(45098915-45098978)
chr8 (152-202)||(1667110-1667160)
chr8 (152-202)||(1889074-1889124)
chr8 (154-196)||(7630141-7630183)
chr8 (154-220)||(7878448-7878514)
chr8 (153-199)||(24326113-24326159)
chr8 (153-191)||(26820225-26820263)
chr8 (134-220)||(34770931-34771017)
chr8 (149-227)||(43717848-43717925)
chr8 (149-198)||(6526195-6526244)
chr8 (137-202)||(31915232-31915297)
chr8 (227-288)||(34770817-34770878)
chr8 (155-196)||(35534815-35534856)
chr8 (129-194)||(38260566-38260631)
chr8 (133-178)||(41442416-41442461)
chr8 (135-199)||(4511092-4511156)
chr8 (160-220)||(14926903-14926963)
chr8 (230-290)||(28769426-28769486)
chr8 (230-290)||(34788514-34788574)
chr8 (230-290)||(35869760-35869820)
chr8 (227-283)||(38036196-38036252)
chr8 (149-189)||(42215042-42215082)
chr8 (227-283)||(42597331-42597387)
chr8 (154-226)||(43393687-43393759)
[»] chr4 (56 HSPs)
chr4 (134-215)||(3549481-3549562)
chr4 (129-220)||(7367975-7368066)
chr4 (133-189)||(46247267-46247323)
chr4 (149-220)||(28615413-28615483)
chr4 (149-220)||(44320027-44320098)
chr4 (134-199)||(2996636-2996701)
chr4 (139-199)||(18628495-18628555)
chr4 (133-189)||(46013265-46013321)
chr4 (230-290)||(54325124-54325184)
chr4 (134-220)||(6428081-6428167)
chr4 (154-220)||(19429391-19429457)
chr4 (231-281)||(21593099-21593149)
chr4 (149-198)||(22471352-22471401)
chr4 (233-290)||(24929416-24929473)
chr4 (230-289)||(4191663-4191723)
chr4 (135-219)||(10192351-10192434)
chr4 (136-220)||(37575857-37575941)
chr4 (228-292)||(45128395-45128459)
chr4 (139-191)||(47399553-47399605)
chr4 (230-286)||(47970245-47970301)
chr4 (133-220)||(1137774-1137861)
chr4 (228-290)||(23503481-23503544)
chr4 (134-181)||(27123312-27123359)
chr4 (133-220)||(36577463-36577550)
chr4 (230-289)||(36734817-36734876)
chr4 (133-216)||(42641564-42641647)
chr4 (153-220)||(42866150-42866217)
chr4 (149-187)||(4071956-4071994)
chr4 (149-187)||(4500909-4500947)
chr4 (154-188)||(11877898-11877932)
chr4 (228-262)||(49219090-49219124)
chr4 (149-179)||(49940128-49940158)
chr4 (149-179)||(50681050-50681080)
chr4 (149-187)||(50742790-50742828)
chr4 (227-289)||(51555951-51556013)
chr4 (154-219)||(1017111-1017176)
chr4 (228-285)||(4071811-4071867)
chr4 (230-287)||(4449182-4449239)
chr4 (134-199)||(8328061-8328126)
chr4 (231-288)||(18630605-18630662)
chr4 (134-199)||(19429454-19429519)
chr4 (227-260)||(20105917-20105950)
chr4 (149-202)||(22523758-22523811)
chr4 (136-189)||(31642258-31642311)
chr4 (163-220)||(32071955-32072012)
chr4 (149-198)||(39178209-39178258)
chr4 (233-290)||(44319873-44319929)
chr4 (227-290)||(486004-486068)
chr4 (135-199)||(4691912-4691976)
chr4 (258-290)||(10173446-10173478)
chr4 (160-220)||(11264390-11264450)
chr4 (230-290)||(19422341-19422401)
chr4 (230-270)||(20936089-20936129)
chr4 (230-290)||(24443961-24444021)
chr4 (152-188)||(42121555-42121591)
chr4 (129-185)||(50799986-50800042)
[»] chr2 (50 HSPs)
chr2 (135-220)||(13866942-13867027)
chr2 (230-290)||(37053517-37053577)
chr2 (134-226)||(28803445-28803537)
chr2 (133-190)||(5902500-5902557)
chr2 (149-226)||(37474843-37474919)
chr2 (134-198)||(787395-787459)
chr2 (227-286)||(3673734-3673793)
chr2 (133-220)||(4350752-4350839)
chr2 (149-220)||(11513974-11514045)
chr2 (129-220)||(40158776-40158867)
chr2 (149-220)||(41170688-41170759)
chr2 (133-199)||(2964751-2964817)
chr2 (165-227)||(28810366-28810428)
chr2 (232-290)||(34339046-34339104)
chr2 (230-283)||(14277981-14278034)
chr2 (230-290)||(17952788-17952848)
chr2 (228-288)||(31461363-31461423)
chr2 (230-282)||(34054988-34055040)
chr2 (227-283)||(35755586-35755642)
chr2 (149-225)||(39983423-39983499)
chr2 (134-189)||(1318299-1318354)
chr2 (230-289)||(3102617-3102676)
chr2 (149-220)||(8017512-8017583)
chr2 (49-112)||(11513985-11514048)
chr2 (128-227)||(28933880-28933979)
chr2 (231-290)||(33197327-33197386)
chr2 (46-105)||(35713283-35713342)
chr2 (133-188)||(43808620-43808675)
chr2 (133-191)||(1801730-1801788)
chr2 (149-187)||(3227652-3227690)
chr2 (154-220)||(19978030-19978096)
chr2 (149-199)||(32837401-32837451)
chr2 (137-187)||(39622017-39622067)
chr2 (153-202)||(5759514-5759563)
chr2 (236-289)||(10190203-10190256)
chr2 (165-226)||(15370238-15370299)
chr2 (134-199)||(29430821-29430886)
chr2 (230-262)||(5903252-5903284)
chr2 (151-187)||(8187407-8187443)
chr2 (131-199)||(12140592-12140660)
chr2 (152-200)||(13869049-13869097)
chr2 (140-176)||(27317449-27317485)
chr2 (230-290)||(28803593-28803653)
chr2 (230-290)||(37033967-37034027)
chr2 (230-290)||(37766721-37766781)
chr2 (156-188)||(38077026-38077058)
chr2 (149-225)||(40400816-40400892)
chr2 (170-226)||(40759259-40759315)
chr2 (129-185)||(43199740-43199796)
chr2 (160-220)||(43985298-43985358)
[»] chr1 (36 HSPs)
chr1 (132-223)||(4757399-4757490)
chr1 (138-196)||(4033962-4034020)
chr1 (153-263)||(28467192-28467297)
chr1 (155-216)||(35017667-35017727)
chr1 (133-213)||(31517668-31517748)
chr1 (134-226)||(32515356-32515448)
chr1 (134-198)||(34536221-34536285)
chr1 (231-290)||(870968-871027)
chr1 (129-220)||(4549462-4549553)
chr1 (129-220)||(18327067-18327158)
chr1 (149-196)||(43371836-43371883)
chr1 (134-181)||(49692012-49692059)
chr1 (134-187)||(42336678-42336731)
chr1 (129-189)||(4576863-4576923)
chr1 (230-290)||(30259574-30259634)
chr1 (136-224)||(51929379-51929467)
chr1 (134-220)||(12763386-12763473)
chr1 (227-282)||(36070181-36070236)
chr1 (149-220)||(36070259-36070330)
chr1 (227-290)||(46499938-46500001)
chr1 (149-199)||(1393030-1393080)
chr1 (150-200)||(4868478-4868528)
chr1 (239-289)||(6659627-6659677)
chr1 (230-292)||(23895257-23895319)
chr1 (133-191)||(37593634-37593692)
chr1 (133-191)||(38170640-38170698)
chr1 (228-290)||(43372044-43372106)
chr1 (149-226)||(2295175-2295251)
chr1 (149-202)||(4768768-4768821)
chr1 (171-219)||(2522696-2522744)
chr1 (132-212)||(8780353-8780433)
chr1 (227-263)||(15687157-15687193)
chr1 (230-286)||(18434565-18434621)
chr1 (231-287)||(42336588-42336644)
chr1 (133-217)||(43420320-43420404)
chr1 (228-280)||(52559913-52559965)
[»] chr7 (41 HSPs)
chr7 (133-199)||(25670528-25670594)
chr7 (227-288)||(30496629-30496690)
chr7 (133-190)||(36537970-36538027)
chr7 (136-220)||(23214920-23215004)
chr7 (153-215)||(20547316-20547378)
chr7 (136-220)||(3836604-3836688)
chr7 (152-219)||(529443-529510)
chr7 (230-289)||(753291-753350)
chr7 (149-220)||(20526525-20526595)
chr7 (129-188)||(22387849-22387908)
chr7 (233-288)||(46213728-46213783)
chr7 (129-199)||(8094364-8094434)
chr7 (134-220)||(33894690-33894776)
chr7 (228-290)||(49060463-49060525)
chr7 (233-290)||(5373148-5373205)
chr7 (153-186)||(29275009-29275042)
chr7 (228-289)||(30751441-30751502)
chr7 (227-287)||(24973870-24973930)
chr7 (133-220)||(43250620-43250707)
chr7 (153-220)||(6977498-6977565)
chr7 (230-289)||(7244626-7244685)
chr7 (133-188)||(30535625-30535680)
chr7 (227-290)||(35536030-35536093)
chr7 (230-289)||(45593806-45593865)
chr7 (149-219)||(425745-425815)
chr7 (129-219)||(1645622-1645712)
chr7 (230-288)||(3241366-3241424)
chr7 (149-187)||(17942149-17942187)
chr7 (153-195)||(27508278-27508320)
chr7 (149-219)||(32410618-32410688)
chr7 (129-202)||(33645899-33645973)
chr7 (149-199)||(34754752-34754802)
chr7 (149-179)||(40687508-40687538)
chr7 (163-231)||(27700076-27700145)
chr7 (149-178)||(30748997-30749026)
chr7 (134-199)||(44808221-44808286)
chr7 (236-289)||(47006972-47007025)
chr7 (149-194)||(48131415-48131460)
chr7 (140-180)||(4970752-4970792)
chr7 (230-290)||(31341117-31341177)
chr7 (234-282)||(37832230-37832278)
[»] chr6 (46 HSPs)
chr6 (133-202)||(33737632-33737701)
chr6 (128-196)||(2263249-2263317)
chr6 (230-290)||(24774681-24774741)
chr6 (231-290)||(13360658-13360717)
chr6 (133-198)||(769200-769265)
chr6 (149-226)||(32171298-32171375)
chr6 (227-291)||(29269818-29269882)
chr6 (133-220)||(26559160-26559247)
chr6 (134-229)||(30863309-30863404)
chr6 (230-288)||(10452447-10452505)
chr6 (227-289)||(32386647-32386709)
chr6 (227-289)||(35095011-35095073)
chr6 (134-187)||(32917260-32917313)
chr6 (230-290)||(2514625-2514685)
chr6 (242-290)||(29249397-29249445)
chr6 (134-202)||(32577925-32577993)
chr6 (129-229)||(33080490-33080590)
chr6 (134-182)||(33116647-33116695)
chr6 (134-181)||(2460111-2460158)
chr6 (149-196)||(2735148-2735195)
chr6 (227-286)||(4248885-4248944)
chr6 (227-290)||(8349748-8349811)
chr6 (149-220)||(10016701-10016772)
chr6 (227-290)||(29274313-29274376)
chr6 (227-274)||(33787829-33787876)
chr6 (129-176)||(33832238-33832285)
chr6 (229-289)||(1852508-1852565)
chr6 (227-289)||(5551387-5551448)
chr6 (149-179)||(9202952-9202982)
chr6 (136-220)||(9559462-9559543)
chr6 (239-289)||(31668781-31668831)
chr6 (57-102)||(6742910-6742955)
chr6 (227-288)||(7713950-7714011)
chr6 (171-220)||(8010457-8010506)
chr6 (154-199)||(8420139-8420184)
chr6 (129-182)||(31686322-31686375)
chr6 (134-199)||(33500422-33500487)
chr6 (156-220)||(2727804-2727868)
chr6 (232-288)||(5884947-5885003)
chr6 (234-290)||(7351699-7351755)
chr6 (134-182)||(19752765-19752813)
chr6 (133-189)||(27595519-27595575)
chr6 (133-181)||(27693399-27693447)
chr6 (149-189)||(31668435-31668475)
chr6 (230-286)||(32975905-32975961)
chr6 (133-189)||(34403917-34403973)
[»] scaffold0654 (1 HSPs)
scaffold0654 (227-290)||(6721-6784)
[»] scaffold0053 (1 HSPs)
scaffold0053 (230-281)||(20111-20162)
[»] scaffold0014 (1 HSPs)
scaffold0014 (227-290)||(116640-116703)
[»] chr5 (47 HSPs)
chr5 (227-290)||(35095867-35095930)
chr5 (149-199)||(12407672-12407722)
chr5 (160-220)||(19177534-19177594)
chr5 (230-286)||(37063161-37063217)
chr5 (161-220)||(10771809-10771868)
chr5 (133-220)||(12459922-12460009)
chr5 (231-290)||(20982223-20982282)
chr5 (152-199)||(21782598-21782645)
chr5 (134-220)||(11297117-11297203)
chr5 (230-288)||(28586853-28586911)
chr5 (140-202)||(29336699-29336761)
chr5 (230-287)||(7096214-7096271)
chr5 (134-199)||(11457161-11457226)
chr5 (155-220)||(36326092-36326157)
chr5 (165-226)||(40335788-40335849)
chr5 (149-217)||(5377121-5377189)
chr5 (142-202)||(7907953-7908013)
chr5 (134-194)||(10907441-10907501)
chr5 (231-290)||(32194169-32194229)
chr5 (137-221)||(32849244-32849328)
chr5 (149-220)||(912568-912639)
chr5 (153-196)||(4273322-4273365)
chr5 (134-201)||(19177051-19177118)
chr5 (149-220)||(25720338-25720409)
chr5 (237-284)||(29588809-29588856)
chr5 (153-192)||(38036008-38036047)
chr5 (133-227)||(4619769-4619863)
chr5 (133-215)||(10125644-10125726)
chr5 (134-220)||(11095416-11095502)
chr5 (227-289)||(17756813-17756875)
chr5 (236-290)||(26516221-26516275)
chr5 (133-179)||(37526161-37526207)
chr5 (133-199)||(37611157-37611223)
chr5 (133-179)||(37690598-37690644)
chr5 (133-199)||(37787887-37787953)
chr5 (136-226)||(42100377-42100466)
chr5 (227-264)||(10303750-10303787)
chr5 (236-289)||(13224353-13224406)
chr5 (228-289)||(19113202-19113263)
chr5 (227-284)||(39128568-39128625)
chr5 (159-199)||(444010-444050)
chr5 (154-186)||(4855778-4855810)
chr5 (238-290)||(11684346-11684398)
chr5 (233-289)||(19177403-19177459)
chr5 (230-290)||(31694441-31694501)
chr5 (230-290)||(35135749-35135809)
chr5 (135-199)||(38728466-38728530)
[»] scaffold0590 (1 HSPs)
scaffold0590 (230-288)||(1161-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (230-288)||(2756-2814)
[»] scaffold0199 (1 HSPs)
scaffold0199 (152-202)||(6891-6941)
[»] scaffold0459 (1 HSPs)
scaffold0459 (136-220)||(6611-6695)
[»] scaffold0366 (1 HSPs)
scaffold0366 (136-220)||(6609-6693)
[»] scaffold0024 (1 HSPs)
scaffold0024 (227-290)||(27499-27562)
[»] scaffold0015 (1 HSPs)
scaffold0015 (129-199)||(68921-68991)
[»] scaffold0508 (1 HSPs)
scaffold0508 (230-290)||(9862-9922)


Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 14 - 292
Target Start/End: Original strand, 50015818 - 50016107
Alignment:
Q  14 atatcttaataaaacggtaagtattcctttaagacttgtttgtattgatttatttgcgcttacctgctagcataatcacatgtgagactgttttagagaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50015818 atatcttaataaaacggtaagtattcctttaagacttgtttgtattgatttatttgcgcttacctgctagcataatcacatgtgagactgttttagagaa 50015917  T
Q  114 cttgtgagacggttctata-----------aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50015918 cttgtgagacggttctataaacatcttataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 50016017  T
Q  203 gagataagccaatccaaagaggcccaatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataaggg 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50016018 gagataagccaatccaaagaggcccaatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataaggg 50016107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 44014790 - 44014711
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccca 228  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||| | ||||||||||||||| |||||||    
T  44014790 ttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccca 44014711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 14548726 - 14548680
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtg 182  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  14548726 atgtcatacgttgttttcataagctctctcaaacagtctcacaagtg 14548680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 19679334 - 19679241
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccca 228  Q
    ||||||||| ||| ||||| |||||||||||||| | | || |||||| |||||| | |||||||||| | |||| |||||||||| |||||||    
T  19679334 catgtcataagttgttttcgtaagttctctcaaagattttcgcaagtgcttatgctagtagataaactcaaataacccaatccaaataggccca 19679241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 47584524 - 47584577
Alignment:
Q  145 gttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  47584524 gttcttttcataagctctctcaaatagtctcacaagtgcttatgtcaatagata 47584577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27294435 - 27294495
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |  ||||||||| ||||    
T  27294435 tctctcaaacagtctcacaagtgcttatgacaatagataaactcaagtaagccaattcaaa 27294495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 41028939 - 41028998
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||| | ||| |||||||||||||   ||||||||||||||||||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataag 41028998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 44374728 - 44374791
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||| |||| ||| ||||   ||||||||||||||||||||||||    
T  44374728 caatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataag 44374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 3776382 - 3776304
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||||||||||||||||||||| |||||||| |  |||||||| |||||||||| | | ||| |||  |||||||||||    
T  3776382 ttttcataagttctctcaaacattctcacaattacttatgccagtagataaactcaaacaagtcaaaacaaagaggccc 3776304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 22667492 - 22667558
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||||||||||||| ||||| || ||||||| || | ||||||||||| ||| |||||    
T  22667492 tctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22667558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 22724131 - 22724197
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||||||||||||| ||||| || ||||||| || | ||||||||||| ||| |||||    
T  22724131 tctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 33307665 - 33307727
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||| |||||| ||||  |||||||   ||||||||||||||||||||||||    
T  33307665 aatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgataag 33307727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 25182992 - 25182947
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagt 181  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  25182992 atgtcataagttgttttcataagctctctcaaacagtctcacaagt 25182947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 33880549 - 33880480
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcca 218  Q
    ||||||||||||||| |||||||| || ||| || ||||| |||||||||| || | |||||||||||||    
T  33880549 ttttcataagttctcccaaacagtttctcaaatgattatgtcaatagataagctcaaataagccaatcca 33880480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 40880954 - 40880869
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||   |||| ||  |||||||||| || | ||||| |||||||||    
T  40880954 catgtcataagttgttttcataagctctctcaaacagtctcacgtatgttcatttcaatagataagcttaaataagtcaatccaaa 40880869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 2304279 - 2304223
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||| |||  |||||||| |||||||||| ||| ||||||||||||||||    
T  2304279 aacatgtcataagttgctttcataatttctctcaaatagtttcacaagtgtttatgc 2304223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 3775860 - 3775772
Alignment:
Q  132 aaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||| ||| ||| |||  ||||| |||  |||||||||| |||| ||||||||||| |||||||||| | ||||| |||||||||    
T  3775860 aaacatgtaataagttgtttctataagctctgccaaacagtctaacaattgtttatgccagtagataaactcaaataaggcaatccaaa 3775772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 31365178 - 31365111
Alignment:
Q  150 tttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcca 218  Q
    |||||||||||||| |||||||||||||||    |||||||||||||||| || | |||||||||||||    
T  31365178 tttcataagttctcccaaacagtctcacaa-aacttatgccaatagataagctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 34707503 - 34707447
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcc 190  Q
    |||||||| | ||| |||||| ||||||||||||||||||||||||| | |||||||    
T  34707503 acatgtcacaagttgttttcaaaagttctctcaaacagtctcacaagcgcttatgcc 34707447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 43948732 - 43948808
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    |||||||| |||||| || |||||||||||| || ||||| |||||||| |||| | || |||||||||||| ||||    
T  43948732 ttttcatatgttctcccatacagtctcacaaatgcttatgacaatagattaactcaaattagccaatccaaacaggc 43948808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 45541633 - 45541725
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    ||||||||||| | | ||||||||||||||   ||||||||| |||||||||||| ||| || |||| || | ||||| ||||||||| ||||    
T  45541633 aacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggc 45541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 51929843 - 51929899
Alignment:
Q  173 ctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcccaa 229  Q
    ||||||||||||||||| ||||||||| || | ||||| ||||||||| ||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaacaggcccaa 51929899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 20210916 - 20210849
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||| ||||||||||||||||||||||| ||||| || ||||||| || | ||||  |||||||||    
T  20210916 cataagatctctcaaacagtctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaa 20210849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 31365298 - 31365232
Alignment:
Q  151 ttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcca 218  Q
    ||||||||||||| |||||||| ||||||    ||||||||||||||||||| | |||||||||||||    
T  31365298 ttcataagttctcccaaacagtgtcacaa-aaattatgccaatagataaactcaaataagccaatcca 31365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 34318073 - 34318038
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatag 263  Q
    |||||||||||||||||||||| |||||||||||||    
T  34318073 aatttgactttattttatattttgttatagaaatag 34318038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 50211813 - 50211852
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatg 188  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  50211813 ttttcataagttctctcaaacagtcttacaagtgcttatg 50211852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 51278244 - 51278303
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||||| |||||| |||||||||||||   |||||| |||| |||||||||||    
T  51278244 tttgactttatttaatattttgttatagaaatagcttatacattagcaattatatgataa 51278303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 53891872 - 53891809
Alignment:
Q  164 tcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    ||||||||  |||||||||||||||| | ||||||| |||| |||||||||||| || ||||||    
T  53891872 tcaaacaggttcacaagtgtttatgctagtagataagctgatataagccaatccgaataggccc 53891809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 25699187 - 25699125
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaa 214  Q
    ||||||| ||||||||  ||||||| ||||| ||||| ||||||||||||| | |||||||||    
T  25699187 tcataagctctctcaagaagtctcataagtgcttatgtcaatagataaactcaaataagccaa 25699125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 31526362 - 31526311
Alignment:
Q  236 tttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||| ||| | ||||||||||||  |||||||||||||||||||||||    
T  31526362 tttattttatcttttgatatagaaatagt--atacataagcacttatatgataa 31526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 37138365 - 37138431
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| |||| ||||| ||||||||||||||||||| || |||||||| |   |||||||||||||||    
T  37138365 ataaattctgtcaaatagtctcacaagtgtttatgtcagtagataaattctaataagccaatccaaa 37138431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 41057233 - 41057311
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||||| || ||||| |||||||||||||||||| ||||||   ||||||| || | |||||||||| |||| ||||||    
T  41057233 ttttcacaaattctcccaaacagtctcacaagtgcttatgcatgtagataagctcaaataagccaattcaaataggccc 41057311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 49465657 - 49465579
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||||||||||||||  ||||| | ||||||||| |||||  | || ||||||||| ||||| ||||||||| ||||||    
T  49465657 ttttcataagttctccgaaacaatatcacaagtgcttatggtagtaaataaactgaaataagtcaatccaaataggccc 49465579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 905058 - 905115
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||| ||| |||||||||||||   |||| ||||| |||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 16790441 - 16790502
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||| |||||||||| | | |||||| ||||||   |||||||||||||||||||||||    
T  16790441 aatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 24281115 - 24281192
Alignment:
Q  139 tcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatc 216  Q
    ||||| ||| |||||||||| ||||||||||| || |||||||| |||| ||| |||||| ||| | ||||| |||||    
T  24281115 tcataagttgttttcataagctctctcaaacaatcacacaagtgcttataccagtagatagactcaaataagtcaatc 24281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 28283591 - 28283558
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtg 182  Q
    |||||||||||||| |||||||||||||||||||    
T  28283591 ttttcataagttctttcaaacagtctcacaagtg 28283558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 37273197 - 37273262
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||| ||| |||||| |||| ||||||||||||| |||| |||||| |||| ||||    
T  37273197 acatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgctaataaataa 37273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 43115119 - 43115212
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||||||||| ||| ||| |||||  |||  |||||| ||||||||||| ||||| |||||||||| || | |||||| |||| ||| ||||||    
T  43115119 acatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatgtcaatagataaccttatataagcaaatcaaaacaggccc 43115212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 1395656 - 1395604
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcactt 280  Q
    |||||||||||||||||| ||| |||||||||||||   ||||||| ||||||    
T  1395656 aatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 2413671 - 2413623
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagat 197  Q
    |||||||||| |||||||||||| || ||||||| |||||| |||||||    
T  2413671 ttttcataagctctctcaaacagacttacaagtgattatgctaatagat 2413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 3015936 - 3015995
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||| ||||||| |||| ||||||||||| |  |||||||||||||||||| |||||    
T  3015936 tttgacttcattttatctttg-ttatagaaataattaatacataagcacttatataataag 3015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 35127455 - 35127519
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttat-atgataag 290  Q
    |||||| |||||| | ||| ||| ||||||||||||| | |||||||||||||||| ||||||||    
T  35127455 caatttaactttagtatatcttttgttatagaaatagcctatacataagcacttatcatgataag 35127519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 38462264 - 38462204
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| | |||||||||||   ||| |||| |||||||||||||||    
T  38462264 tttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataag 38462204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 44295605 - 44295645
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||||||||||||||| ||| ||||||||| ||||||    
T  44295605 ttttcataagttctctcaaatagtatcacaagtgcttatgc 44295645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 16162838 - 16162917
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccca 228  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||| | ||||||||||||||| |||||||    
T  16162838 ttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccca 16162917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 2488016 - 2487929
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||| ||| ||| ||||||||||||||| |||||||||||||||||| ||||| || ||||| |||| | |||||||||||||||    
T  2488016 aacatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaa 2487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 14482188 - 14482125
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  14482188 caatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataag 14482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 30191149 - 30191071
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagc 211  Q
    ||||||||||| ||| ||| |||||| |||| |||||||||| ||||||| ||||||||||||||||||| | ||||||    
T  30191149 aacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataagc 30191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 6950385 - 6950468
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcc 217  Q
    |||||||||| ||| ||| |||||| |||| |||||| |||||||| ||||||||||| |||||||||| | ||||| ||||||    
T  6950385 acatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 12833441 - 12833488
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  12833441 tcatatgttctctcaaacagtctcacaagtgcttatgccaatagataa 12833488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 12851254 - 12851327
Alignment:
Q  149 ttttcataagttctctcaaacagtct--cacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||||| || ||||||||||  ||||||||||||||||||||| |||  | |||||||||||||||||    
T  12851254 ttttcataagttttcccaaacagtctatcacaagtgtttatgccaataggtaagttcagataagccaatccaaa 12851327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 39392748 - 39392808
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| ||||||||||||||  |||||||  |||||||||||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataag 39392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 1664450 - 1664500
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||| |||| ||||||||||||||||||||||||| | ||||||||||    
T  1664450 tcataagctctcccaaacagtctcacaagtgtttatgctagtagataaact 1664500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 7918773 - 7918723
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| |||| ||||||||||||||||||||||||| | |||||||    
T  7918773 ttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataa 7918723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 11569464 - 11569382
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatc 216  Q
    |||||||||| | | ||| |||||| ||||| ||||||||||||||||| ||||||||  |||||| ||  ||||||||||||    
T  11569464 acatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatgccagcagataagctctgataagccaatc 11569382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 24558928 - 24558970
Alignment:
Q  148 cttttcataagttctctcaaacagtctcacaagtgtttatgcc 190  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  24558928 cttttcataggttctcccaaacagtctcacaagtgtttatgcc 24558970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 39881729 - 39881663
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||| | | |||||| ||| |||  |||||| ||||||||||||||||||||||||||||    
T  39881729 aacatgtcataagctattttcacaagctcttccaaacaatctcacaagtgtttatgccaatagataa 39881663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 43504809 - 43504907
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||||||| ||| || ||| ||||||| |||||||  |||||||| |||||||| ||| |||| ||||||| || | |||||||||||| || ||||||    
T  43504809 tataaacaagtcgtaagttgttttcatcagttctccgaaacagtcacacaagtgcttaagccagtagataagcttaaataagccaatcctaataggccc 43504907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 9700080 - 9700157
Alignment:
Q  150 tttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    ||||| ||| ||||||||| |||||||||||||||||||| | ||||||| || | |||||  |||||||| ||||||    
T  9700080 tttcacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 9700157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 3161631 - 3161575
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||| ||| |||||||||||| ||  |||||||||||| |||||||||||    
T  3161631 aacatgtcataagttattttcataagttttcgaaaacagtctcacgagtgtttatgc 3161575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 8629520 - 8629564
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaa 179  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||    
T  8629520 catgtcataagttgttttcataagttctctcaaacggtctcacaa 8629564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 42508653 - 42508709
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||||||  |||||||||||| | |||||||| | ||||||||||||    
T  42508653 gactttattttatattttattatagaaatagccaatacataaacccttatatgataa 42508709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 44236815 - 44236739
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    ||||||||  ||||| | |||||||||||||||| |||||||| |||||||||| | |||||  |||||||| ||||    
T  44236815 ttttcatagattctcccgaacagtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 1561366 - 1561405
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  1561366 tctctcaaacaatctcacaagtgtttatgccattagataa 1561405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 7008662 - 7008752
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    |||||||||| ||| |||  ||||| |||||| ||| |||||||||||| |||||||| |||||||||| | ||||| |||| |||| ||||    
T  7008662 acatgtcataggttgtttctataagctctctctaac-gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaacaggc 7008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 14949929 - 14949984
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||||| ||| |||||||||| ||||  |||||||||||||| |||||||||    
T  14949929 acatgtcataagttattttcataagctctcctaaacagtctcacaaatgtttatgc 14949984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 26473717 - 26473646
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| ||||||| ||| |||| |||| | |||||||||||||||||||||||||  ||||||| | ||||||    
T  26473717 ttttaataagttttctaaaactgtcttataagtgtttatgccaatagataaactccgataagctattccaaa 26473646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 45071432 - 45071523
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| |||||||||| ||| |||||||||| ||||  |||||| ||| ||| | |||||| || |||||||  | |||||||||||||||||    
T  45071432 tatagacatgtcataagttgttttcataagctctccgaaacagcctcccaattttttatgtcattagataagttcagataagccaatccaaa 45071523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 45098978 - 45098915
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||| ||| |||||||| ||||||  ||||| |||| ||||||||||||||| |||||||    
T  45098978 atgtcataagttgttttcataggttctcggaaacaatctctcaagtgtttatgccagtagataa 45098915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 1667110 - 1667160
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||| | || ||||||||||||||||||||| ||||| ||||||||||    
T  1667110 tcataagatttcccaaacagtctcacaagtgtttgtgccagtagataaact 1667160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 1889124 - 1889074
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||| | || |||||||||||| |||||||||||||| ||||||||||    
T  1889124 tcataagctttcccaaacagtctcaaaagtgtttatgccagtagataaact 1889074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 7630183 - 7630141
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||    
T  7630183 ataagttctcttaaacagtctgacaagtgtttatgtcaataga 7630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 7878514 - 7878448
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||| |||| ||||||||||||  |||  |||||| | |||||||||| |||||||||||||||||    
T  7878514 ataagctctcccaaacagtctcattagttcttatgcaagtagataaacttagataagccaatccaaa 7878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 24326113 - 24326159
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||||    
T  24326113 cataagctctcccaaacagtctcacaagtgcttatgccagtagataa 24326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 26820225 - 26820263
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgcca 191  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  26820225 cataagttttctcaaacagcctcacaagtgtttatgcca 26820263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 34770931 - 34771017
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| | | |||||||| | ||||||||||||| ||||||||| |||||| |  ||||||||| | ||||| ||| |||||    
T  34770931 acatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaa 34771017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 43717925 - 43717848
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    ||||||||||||||| |||| ||||||||||    ||||| |||||||||| || | ||||||||||||||| ||||||    
T  43717925 ttttcataagttctcccaaatagtctcacaa-aacttatgtcaatagataagctcaaataagccaatccaaataggccc 43717848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 6526244 - 6526195
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    ||||| |||||||||||||||| ||||||||| | |||||||| ||||||    
T  6526244 ttttcctaagttctctcaaacaatctcacaagggcttatgccagtagata 6526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 31915297 - 31915232
Alignment:
Q  137 tgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||| ||| |||  ||||| | |||||||||||||||||||| ||||||  ||||||||||||    
T  31915297 tgtcataagttgtttgtataagctttctcaaacagtctcacaagtatttatgtgaatagataaact 31915232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 34770878 - 34770817
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||||||| ||| || || ||||||||   |||||||||||||| ||||||    
T  34770878 caatttgactttattttatcttttgtaatggaaatagtttttacataagcacttacatgata 34770817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 35534856 - 35534815
Alignment:
Q  155 taagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||||||||||||||||| ||||||||| |||||| ||||||    
T  35534856 taagttctctcaaacagtgtcacaagtgcttatgctaataga 35534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 38260566 - 38260631
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaata 194  Q
    |||||| |||||||| ||| |||  |||  ||||||||| || |||||||||||||||||||||||    
T  38260566 tataaatatgtcataagttatttatatagattctctcaatcaatctcacaagtgtttatgccaata 38260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 41442461 - 41442416
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcaca 178  Q
    |||||||||||  || |||||||||||||| |||||||||||||||    
T  41442461 aacatgtcataaattgttttcataagttctgtcaaacagtctcaca 41442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 4511092 - 4511156
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||| || ||| |||||||||||||| || || ||||||||||||| |||| ||| |||||||    
T  4511092 catgtcttaagttgttttcataagttctttcgaatagtctcacaagtgcttataccagtagataa 4511156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 14926963 - 14926903
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||||||||||| |||||||| || ||||  | | ||||| |||||||||    
T  14926963 tctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaa 14926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 28769426 - 28769486
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||| |||||||| || ||||||| |||||   ||||||||||| ||||||||||||    
T  28769426 tttgacttaattttatagtttgttataggaatagcttatacataagcatttatatgataag 28769486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 34788514 - 34788574
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| |||||| ||| ||||||   |||| |||||| ||||||||||||    
T  34788514 tttgactttattttatctttggtcataaaaatagcttatacgtaagcatttatatgataag 34788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 35869820 - 35869760
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||| |||||||||||||| ||| ||||||| |   ||||||||| ||||||||||||||    
T  35869820 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataag 35869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 38036196 - 38036252
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttata 283  Q
    |||||||| |||||||||| ||| |||| | |||||||  |||||||||||||||||    
T  38036196 caatttgaatttattttattttttgttaaataaatagtttatacataagcacttata 38036252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 42215082 - 42215042
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||||||| |||||||| ||||||||| ||||||    
T  42215082 ttttcataagttctcccaaacagtgtcacaagtgcttatgc 42215042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 42597387 - 42597331
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttata 283  Q
    |||||| |||||||||||| ||| |||||||||||||   ||||||||| |||||||    
T  42597387 caattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 43393759 - 43393687
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||| |||| |||||||||||| |||||||| ||| | ||||||| || | ||||| ||||||||| |||||    
T  43393759 ataagctctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaataggcc 43393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 3549562 - 3549481
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaat 215  Q
    |||||||||||  | |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||    
T  3549562 acatgtcatacactattttcataagttctctcaaacagtctcataagtgcttatgccaatagataaactaaaataagccaat 3549481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 7368066 - 7367975
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||| | | ||||||| || |||| |||||||||||||||| |||||||||  |||||||||| | ||||| |||||||||    
T  7368066 tataaacatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaa 7367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 46247267 - 46247323
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||    
T  46247267 aacatgtcataagttcttttcataagatctctcagacaatctcacaagtgtttatgc 46247323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 28615413 - 28615483
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||| |||||| |||||||||||||||||| | |||||||||| | ||||| |||||||||    
T  28615413 ttttcataagttctc-caaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaa 28615483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 44320027 - 44320098
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||| ||| || | |||| ||||||||||    
T  44320027 ttttcataagctctcccaaacagtctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaa 44320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 2996636 - 2996701
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||| |||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||    
T  2996636 acatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataa 2996701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 18628555 - 18628495
Alignment:
Q  139 tcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||| ||| |||||||||| |||| |||||||||||||||||||||||| || |||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataa 18628495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 46013321 - 46013265
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||| |||| |||||||||||||| ||||||| ||| ||||||||||||||||||    
T  46013321 aacatgccataagttcttttcataagatctctcagacaatctcacaagtgtttatgc 46013265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 54325124 - 54325184
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| || |||||||||||  ||||| ||||||||||||||||||    
T  54325124 tttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataag 54325184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 6428081 - 6428167
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| ||| |||||||||  |||||||||| |||||||||||| |||| |||||| |||| || | ||||| |||| ||||    
T  6428081 acatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatataagctcaaataagtcaattcaaa 6428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 19429457 - 19429391
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||| |||| ||||||||||||||||||||||| ||| || |||| || | |||||||||||||||    
T  19429457 ataagctctcccaaacagtctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 21593099 - 21593149
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcactta 281  Q
    ||||||||||||||| ||| ||||||||||||||  |||||||||||||||    
T  21593099 ttgactttattttatctttagttatagaaatagtttatacataagcactta 21593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 22471352 - 22471401
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    ||||||||||||||| |||||||||||||||||| ||||| || ||||||    
T  22471352 ttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 24929473 - 24929416
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||| ||| |||||||||||||| |||||| || || ||||||||||||    
T  24929473 gactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataag 24929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 4191723 - 4191663
Alignment:
Q  230 tttgactttatttt-atatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||| || ||| |||||||||||||   |||||||||||||||||||||||    
T  4191723 tttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 10192351 - 10192434
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    ||||| ||| ||| |||| ||||||||||||||||||| |||||| ||||||||||| || |||| || | |||||| |||||||    
T  10192351 catgttataagttatttttataagttctctcaaacagt-tcacaaatgtttatgccagtacataagctcaaataagcaaatccaa 10192434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 37575941 - 37575857
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| ||| ||| |||||||||||||||||||||| | |||| || |||||||| |  ||||||||| | ||||| |||||||||    
T  37575941 atgttataagttattttcataagttctctcaaacaatgtcacgagagtttatgctagcagataaactcaaataagtcaatccaaa 37575857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 45128395 - 45128459
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataaggg 292  Q
    ||||||| || ||||||| ||| ||||||||||||||  |||||||||  |||||||||||||||    
T  45128395 aatttgatttgattttatcttttgttatagaaatagtttatacataagttcttatatgataaggg 45128459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 47399553 - 47399605
Alignment:
Q  139 tcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcca 191  Q
    ||||| ||| |||||| |||||||||||| ||||||||||||| |||||||||    
T  47399553 tcataagttgttttcacaagttctctcaatcagtctcacaagtttttatgcca 47399605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 47970301 - 47970245
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    |||||||| ||||||| ||| |||||||||||||   ||||||||||||||||||||    
T  47970301 tttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 1137774 - 1137861
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||| | | |||||||||||||||  ||||||| |||||||||||||   || |||||||| | | |||||| ||||||||    
T  1137774 aacatgtcataagatgttttcataagttctcctaaacagtgtcacaagtgtttaaaacactagataaaatcaaataagctaatccaaa 1137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 23503544 - 23503481
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttat-atgataag 290  Q
    ||||| |||||||||||||||| ||||||||| |||   |||||||||||||||| ||||||||    
T  23503544 aatttaactttattttatattttgttatagaattagattatacataagcacttatcatgataag 23503481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 27123359 - 27123312
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagt 181  Q
    |||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  27123359 acatgtcataagttgtttccataagctctctcaaacagtctcacaagt 27123312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 36577550 - 36577463
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||| ||| ||||  |||||||||  ||||||||||||||||| ||||  ||||||| ||| | | ||||| |||||||||    
T  36577550 aacatgtcataagttgtttttgtaagttctccgaaacagtctcacaagtgcttatctcaatagacaaattcaaataagtcaatccaaa 36577463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 36734876 - 36734817
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||||  ||| |||||||||| ||   |||||||||||||||||||||||    
T  36734876 tttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataa 36734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 42641647 - 42641564
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatc 216  Q
    ||||||||||| | | ||||||||||||||   ||||||| ||||||||||| | |||| ||||||| || | |||||||||||    
T  42641647 aacatgtcataaggtgttttcataagttcttgaaaacagtatcacaagtgttcacgccagtagataagctcaaataagccaatc 42641564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 42866150 - 42866217
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||| |||| ||||||| | |||||||||||| || ||||||| | | |||||||||||||    
T  42866150 cataagttctcccaaagagtctcaaaggtgtttatgccagtaaataaactcaaacaagccaatccaaa 42866217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 4071956 - 4071994
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  4071956 ttttcataagctctctcaaacagtctcacaagtgcttat 4071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 4500909 - 4500947
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  4500909 tttttataagttctcacaaacagtctcacaagtgtttat 4500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 11877898 - 11877932
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatg 188  Q
    |||||||||| ||||||||||||||||||||||||    
T  11877898 ataagttctcacaaacagtctcacaagtgtttatg 11877932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 49219124 - 49219090
Alignment:
Q  228 aatttgactttattttatatttggttatagaaata 262  Q
    |||||||||||||||||||||| ||||||||||||    
T  49219124 aatttgactttattttatattttgttatagaaata 49219090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 49940158 - 49940128
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaa 179  Q
    |||||||||||||||||||||||||||||||    
T  49940158 ttttcataagttctctcaaacagtctcacaa 49940128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 50681080 - 50681050
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaa 179  Q
    |||||||||||||||||||||||||||||||    
T  50681080 ttttcataagttctctcaaacagtctcacaa 50681050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 50742828 - 50742790
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  50742828 ttttcataagttctctcaaacagtctaacaagtgcttat 50742790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 51555951 - 51556013
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||| |||||||||||||| ||| ||||||  |||||   |||||||||||||||||||||||    
T  51555951 caatctgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 1017111 - 1017176
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    |||||||||  |||||||||||||||||||||||| || ||||| | || | ||||| ||||||||    
T  1017111 ataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 4071867 - 4071811
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatg 285  Q
    |||||||||||||||||| ||| ||||||||||||||  ||| |||| ||||||||||    
T  4071867 aatttgactttattttatcttttgttatagaaatagt-tatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 4449182 - 4449239
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgat 287  Q
    ||||||||||| |||| ||||||||||||||||||  | | |||||||| ||||||||    
T  4449182 tttgactttatattatctttggttatagaaatagtttaaatataagcacgtatatgat 4449239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 8328126 - 8328061
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||  || |||||||||| | |  |||||||||||| ||||| ||||||||||||||||    
T  8328126 acatgtcataaattgttttcataagctattccaaacagtctcataagtgcttatgccaatagataa 8328061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 18630662 - 18630605
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||| ||| ||||| ||||||||  || ||||||| |||||||||||    
T  18630662 ttgactttattttatcttttgttattgaaatagtttatgcataagcgcttatatgata 18630605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 19429519 - 19429454
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||| | | |||||| |||| ||||||||||||| ||||||||| |||||| ||||    
T  19429519 acatgtcataagttttctccataagctctcccaaacagtctcacgagtgtttataccaataaataa 19429454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 20105917 - 20105950
Alignment:
Q  227 caatttgactttattttatatttggttatagaaa 260  Q
    ||||||||||||||||||||||| ||||||||||    
T  20105917 caatttgactttattttatattttgttatagaaa 20105950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 22523758 - 22523811
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||||||||  |||||||||||||||||||  ||||| || ||||||||||    
T  22523758 ttttcataagttgactcaaacagtctcacaagtacttatgtcagtagataaact 22523811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 31642258 - 31642311
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||| ||| ||||||||||||||||||||||||  ||||  |||||||||    
T  31642258 atgtcataagttgttttcataagttctctcaaacagtgacacatttgtttatgc 31642311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 32071955 - 32072012
Alignment:
Q  163 ctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||| || ||||||    
T  32071955 ctcaaactgtctcacaagtgcttatgtcaatagataaactcaaataagtcagtccaaa 32072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 39178258 - 39178209
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    ||||||||||||||| |||||||| ||| ||||||||||| || ||||||    
T  39178258 ttttcataagttctcccaaacagtgtcaaaagtgtttatgtcagtagata 39178209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 44319929 - 44319873
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||| |||  |||||||||||||  |||||| |||||||||||||||||    
T  44319929 gactttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataag 44319873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 486068 - 486004
Alignment:
Q  227 caatttgacttt-attttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||| ||||||| ||| ||| |||||||||   |||||||||||||| |||||||||    
T  486068 caatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataag 486004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 4691912 - 4691976
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||| ||| ||| |||||||| ||||||| ||||||||||||| || || || |||||||    
T  4691912 catgtcataagttgtttccataagttttctcaaatagtctcacaagtgattgtgacagtagataa 4691976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 10173478 - 10173446
Alignment:
Q  258 aaatagtccatacataagcacttatatgataag 290  Q
    ||||||| |||||||||||||||||||||||||    
T  10173478 aaatagttcatacataagcacttatatgataag 10173446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 11264390 - 11264450
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| ||||||||||||||  ||||||||| | |||||| ||| | |||||||||||||||    
T  11264390 tctcccaaacagtctcacagatgtttatgctagtagatagactcaaataagccaatccaaa 11264450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 19422401 - 19422341
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||| ||| ||| ||||||||||||    ||||||||||| ||||||||||||    
T  19422401 tttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataag 19422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 20936089 - 20936129
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatac 270  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  20936089 tttgactttattttatcttttgttatagaaatagtctatac 20936129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 24444021 - 24443961
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||| |||||||||||||| ||| ||||||| |   ||||||||| ||||||||||||||    
T  24444021 tttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataag 24443961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 42121555 - 42121591
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatg 188  Q
    |||||||||||||||||||||||||||| || |||||    
T  42121555 tcataagttctctcaaacagtctcacaaatgcttatg 42121591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 50800042 - 50799986
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgttt 185  Q
    |||| |||||||||| ||| ||| ||| ||||||| |||||| ||||||||||||||    
T  50800042 tatagacatgtcataagttgtttacattagttctcccaaacaatctcacaagtgttt 50799986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 13866942 - 13867027
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| || ||||||| || | ||| | |||||||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaa 13867027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 37053577 - 37053517
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||    
T  37053577 tttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataag 37053517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 28803537 - 28803445
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    |||||||||| ||| ||| |||| ||||||||||||||||||||| ||| |||||||  ||||||| || | ||||| ||||||||| |||||    
T  28803537 acatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 5902557 - 5902500
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcc 190  Q
    ||||||||||| | | ||||||||||||||  ||||||||||||||||||||||||||    
T  5902557 aacatgtcataagctgttttcataagttcttccaaacagtctcacaagtgtttatgcc 5902500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 37474843 - 37474919
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    |||||||||| ||||||||| ||||||| |||||||||||  ||||||||||||  ||||||| |||||||| |||||    
T  37474843 ttttcataagctctctcaaagagtctcataagtgtttatg-taatagataaactcggataagctaatccaaataggcc 37474919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 787395 - 787459
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    |||||||||| | | ||||||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  787395 acatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagata 787459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 3673793 - 3673734
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    |||||| |||||||||||||||| ||||||||||||    ||||||||||||||||||||    
T  3673793 caatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 4350752 - 4350839
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||| | | |||||||||||||||||||||| ||||  ||||| ||||| || |||| || || | |||||||||||||||    
T  4350752 aacatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataagccaatccaaa 4350839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 11513974 - 11514045
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| ||||| ||||||||||||||||| |||||| | ||||||| || | |||| ||||||||||    
T  11513974 ttttcataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaa 11514045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 40158776 - 40158867
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||| | | ||||||||||||| | ||| |||||||||||||  ||||| || ||||||  || | |||||||||||||||    
T  40158776 tataaacatgtcataagctgttttcataagttcccccaatcagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 41170688 - 41170759
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||||| |  |||| |||||||||||||||||||  | |||||||||| | |||||||||||||||    
T  41170688 ttttcataagttattccaaatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaa 41170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 2964817 - 2964751
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||| | | ||||||||||||| |||||||| |||| ||||||||||||||  |||||||    
T  2964817 aacatgtcataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataa 2964751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 28810428 - 28810366
Alignment:
Q  165 caaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    ||||||| |||||||||||||||||||||||| || || | ||||| ||||||||| ||||||    
T  28810428 caaacagcctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaacaggccc 28810366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 34339104 - 34339046
Alignment:
Q  232 tgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||| ||| | |||||||| |||  ||||||||||||||||||||||||    
T  34339104 tgactttattttatctttagctatagaaaaagtttatacataagcacttatatgataag 34339046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 14277981 - 14278034
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttata 283  Q
    ||||||||||||| || ||| ||||||||||||||  |||||||||||||||||    
T  14277981 tttgactttatttaatgtttagttatagaaatagtttatacataagcacttata 14278034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 17952788 - 17952848
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| |||||||||||||   ||| |||||| |||||||||||||    
T  17952788 tttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataag 17952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 31461423 - 31461363
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||||||||||||||| ||| |||||||||||||   ||| |||| |||||||||||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 34054988 - 34055040
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttat 282  Q
    |||| ||||||||||| ||| ||||||||||||| | ||||||||||||||||    
T  34054988 tttgcctttattttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 35755586 - 35755642
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttata 283  Q
    ||||||||||||||||| |||||| ||||||||||||   |||||||| ||||||||    
T  35755586 caatttgactttattttctatttgattatagaaatagcttatacataaacacttata 35755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 39983423 - 39983499
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    |||| |||||||||||||| ||||||||||||  ||||||||  ||||||| || | |||||| |||||||| ||||    
T  39983423 tttttataagttctctcaatcagtctcacaaggatttatgccggtagataacctcaaataagcaaatccaaacaggc 39983499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 1318299 - 1318354
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||||| | | |||||||||| |||| |||||||||||||||||| ||||||    
T  1318299 acatgtcataagatgttttcataagctctcacaaacagtctcacaagtgcttatgc 1318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 3102676 - 3102617
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||||||||| | |||| ||||||   ||||||||||| |||||||||||    
T  3102676 tttgactttattttatattttgctataaaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 8017512 - 8017583
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||| |||| | || |||||||| ||||| |||||||||| || | ||||| |||||||||    
T  8017512 ttttcataagttctcccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatccaaa 8017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 11514048 - 11513985
Alignment:
Q  49 ttgtttgtattgatttatttgcgcttacctgctagcataatcacatgtgagactgttttagaga 112  Q
    ||||||| |||| |||||||| | ||| || ||||||||| ||| |||||||||||||||||||    
T  11514048 ttgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagaga 11513985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 28933880 - 28933979
Alignment:
Q  128 ctataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    |||| |||||| |||| ||| |||||||||| |||  ||||||| || | || |||||||| || ||||||| ||   ||||||||||||||||||||||    
T  28933880 ctatgaacatgccataagttgttttcataagctcttccaaacagacttataaatgtttatggcactagataagctctaataagccaatccaaagaggccc 28933979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 33197327 - 33197386
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||| ||| ||| |||||||||||||   ||| ||||||||||||||||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataag 33197386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 35713342 - 35713283
Alignment:
Q  46 gacttgtttgtattgatttatttgcgcttacctgctagcataatcacatgtgagactgtt 105  Q
    |||||||||||||||||||||||| ||| | || || |||||| ||| ||||||||||||    
T  35713342 gacttgtttgtattgatttatttgagctaatctacttgcataaacacttgtgagactgtt 35713283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 43808620 - 43808675
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatg 188  Q
    ||||||||||| ||| |||||||||| ||||||||| ||||| |||||| ||||||    
T  43808620 aacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg 43808675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 1801730 - 1801788
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcca 191  Q
    ||||||||||| | | ||||||||||||||| |||||| | ||||||||| ||||||||    
T  1801730 aacatgtcataagctgttttcataagttctcccaaacaatatcacaagtgcttatgcca 1801788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 3227690 - 3227652
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  3227690 tttttataagttctcacaaacagtctcacaagtgtttat 3227652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 19978030 - 19978096
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||||||||||||||| |||||| ||||   |||||||||||| | |||||  ||||||||    
T  19978030 ataagttctctcaaacagtctcgcaagtgcttattttaatagataaactaaaataagtgaatccaaa 19978096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 32837401 - 32837451
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||||||| |||||||||||||||||  |||| ||| |||||||    
T  32837401 ttttcataagttctcccaaacagtctcacaagtacttataccactagataa 32837451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 39622017 - 39622067
Alignment:
Q  137 tgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    ||||||| ||| |||||||||||||||||||||||| || |||||| ||||    
T  39622017 tgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttat 39622067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 5759563 - 5759514
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||||| |||| |||||||||||||||||  |||| ||||||||||||||    
T  5759563 cataagctctcccaaacagtctcacaagtacttataccaatagataaact 5759514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 10190256 - 10190203
Alignment:
Q  236 tttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||  || |||||| |||||||  |||||||||||||||||||||||    
T  10190256 tttattttatcctttgttataaaaatagtttatacataagcacttatatgataa 10190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 15370299 - 15370238
Alignment:
Q  165 caaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||||| || |||||||| ||||||| || | ||||| ||||||||| |||||    
T  15370299 caaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 29430821 - 29430886
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| | | ||||||||||||||  |||| |||| |||||||||||||| || |||||||    
T  29430821 acatgtcataagctattttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataa 29430886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 5903284 - 5903252
Alignment:
Q  230 tttgactttattttatatttggttatagaaata 262  Q
    |||||||||||||||||||| ||||||||||||    
T  5903284 tttgactttattttatattttgttatagaaata 5903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 8187443 - 8187407
Alignment:
Q  151 ttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  8187443 ttcataagttctttcaaacagtctcacaagtggttat 8187407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 12140592 - 12140660
Alignment:
Q  131 taaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||| |||||||| ||| |||||||||||||||||||||  | ||  ||||||||||| || |||||||    
T  12140592 taaaaatgtcataagttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataa 12140660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 13869097 - 13869049
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaa 200  Q
    ||||||||||||||||| ||||||| ||||| ||||| || ||||||||    
T  13869097 tcataagttctctcaaatagtctcataagtgcttatgtcagtagataaa 13869049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 27317449 - 27317485
Alignment:
Q  140 catacgttcttttcataagttctctcaaacagtctca 176  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctca 27317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 28803593 - 28803653
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| ||||| ||||||    ||| ||||||||||||||||||||    
T  28803593 tttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataag 28803653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 37034027 - 37033967
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| |||  |||||||||||||  ||||||||| | | ||||||||||    
T  37034027 tttgactttattttatctttttttatagaaatagtttatacataagtattcatatgataag 37033967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 37766781 - 37766721
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| || |||  |||||   ||||||||||||||||||||||||    
T  37766781 tttgactttattttattttttgtcatatgaatagctaatacataagcacttatatgataag 37766721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 38077058 - 38077026
Alignment:
Q  156 aagttctctcaaacagtctcacaagtgtttatg 188  Q
    ||||||||||||||| |||||||||||||||||    
T  38077058 aagttctctcaaacaatctcacaagtgtttatg 38077026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 40400892 - 40400816
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggc 225  Q
    |||||||||||| | ||||||| | |||||||| |||||| || ||||||  || | ||||||||||||||| ||||    
T  40400892 ttttcataagttttttcaaacaatgtcacaagtctttatgtcagtagataggcttaaataagccaatccaaacaggc 40400816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 40759259 - 40759315
Alignment:
Q  170 agtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||| ||||| |||||||||| || | ||||| ||||||||| |||||    
T  40759259 agtctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 43199796 - 43199740
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgttt 185  Q
    ||||||||||||| | ||| | ||| ||| ||||| |||||||||||||||||||||    
T  43199796 tataaacatgtcacaagttgtattcgtaacttctcccaaacagtctcacaagtgttt 43199740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43985298 - 43985358
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||| | ||||||||||||| || |||||||||| | ||||| | |||||||    
T  43985298 tctctcaaacagttttacaagtgtttatgtcagtagataaacttaaataagtcgatccaaa 43985358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 4757399 - 4757490
Alignment:
Q  132 aaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagag 223  Q
    |||||||||||| ||| ||||||||||||||  ||||  |||||||||||||||||| |||||||||| || | ||||| ||| ||||||||    
T  4757399 aaacatgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaagag 4757490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 4034020 - 4033962
Alignment:
Q  138 gtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||||| ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  4034020 gtcataagttattttcataagctctctcaaacaatctcacaagtgtttatgccagtaga 4033962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 263
Target Start/End: Complemental strand, 28467297 - 28467192
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcccaatttgactttattttatatttggt 252  Q
    |||||| |||| |||||||| |||||||||||| || |||||||||| || | | |||||||||||||      |||||||||||||||| |||||| ||    
T  28467297 cataagctctcccaaacagtttcacaagtgtttgtgtcaatagataagctcaaacaagccaatccaaa-----acaatttgactttatttcatattttgt 28467203  T
Q  253 tatagaaatag 263  Q
    ||||| |||||    
T  28467202 tataggaatag 28467192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 35017667 - 35017727
Alignment:
Q  155 taagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatc 216  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| || | |||||||||||    
T  35017667 taagttctc-caaacaatctcacaagtgtttatgccaatagataagctcaaataagccaatc 35017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 31517748 - 31517668
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagcca 213  Q
    ||||||||||  ||| |||| |||||||||| |||||||||||||||||| |||||||| || |||| || | ||||||||    
T  31517748 aacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataagcca 31517668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 32515448 - 32515356
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    |||||||||||| | ||| |||||| |||| |||||||||||||||||| |||||  | |||||||||| | ||| || |||||||| |||||    
T  32515448 acatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 34536221 - 34536285
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    |||||||||| | | ||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  34536221 acatgtcataagctgttttcataagccatctcaaacagtctcacaagtgtttatgtcaatagata 34536285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 871027 - 870968
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||| ||||||| ||| |||||| |||||||  ||||||||||||||||||||||||    
T  871027 ttgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataag 870968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 4549553 - 4549462
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| |||||||||| ||| |||  ||||| |||| |||||||||||| || || |||||||| ||||||| || | |||||||||||||||    
T  4549553 tatagacatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 18327158 - 18327067
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||| ||||||||| ||| ||||||||||||||  |||| ||| ||| ||||| ||||| || ||||||| || | |||||||||||||||    
T  18327158 tataaccatgtcataagttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaa 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 43371883 - 43371836
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  43371883 ttttcataagctctctcaaacagtctcacaagtgcttatgccagtaga 43371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 49692059 - 49692012
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagt 181  Q
    |||||||||| | | |||||||||||||||||||||||||||||||||    
T  49692059 acatgtcataagctattttcataagttctctcaaacagtctcacaagt 49692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 42336678 - 42336731
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||| ||| |||||||||||| |||||||||||| |||||||| ||||    
T  42336678 acatgtcataagttgttttcataagttatctcaaacagtcgcacaagtgcttat 42336731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 4576863 - 4576923
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||||||||||   | |||||||||||| |||||||||||| | |||||||||||||    
T  4576863 tataaacatgtcataaactattttcataagttgtctcaaacagtcccgcaagtgtttatgc 4576923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 30259574 - 30259634
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||||||| |||||||||||||    | ||||||||||| |||||||||    
T  30259574 tttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgataag 30259634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 51929467 - 51929379
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagagg 224  Q
    |||||||| | | |||||||||||||||| ||||||| ||||| ||| ||||| || ||||||| || | | ||| |||||||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaagagg 51929379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 12763386 - 12763473
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact-gagataagccaatccaaa 220  Q
    |||||||||| | | ||||| |||||||||  ||||||||| |||| || |||||| ||||||||||||  | |||||||||||||||    
T  12763386 acatgtcataagctgttttcgtaagttctccaaaacagtcttacaaatgcttatgctaatagataaactcaaaataagccaatccaaa 12763473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 36070236 - 36070181
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttat 282  Q
    |||||| |||||||||||| ||| |||||| |||||| |||||||||||| |||||    
T  36070236 caatttaactttattttatcttttgttataaaaatagcccatacataagcgcttat 36070181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 36070259 - 36070330
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||||||||  ||||||||||||||||| ||||||||  ||||||  | | |||| ||||||||||    
T  36070259 ttttcataagttctcctaaacagtctcacaagtgcttatgccagaagataatatcaaataaaccaatccaaa 36070330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 46499938 - 46500001
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| |||  ||||||||||||   ||| ||||||||||||||| ||||    
T  46499938 caatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatgttaag 46500001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 1393080 - 1393030
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||||||||||  ||||||||||||||||| ||| ||||||    
T  1393080 ttttcataagctctctcaaaccctctcacaagtgtttatgtcaaaagataa 1393030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 4868478 - 4868528
Alignment:
Q  150 tttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaa 200  Q
    ||||||||  |||||||||||||||||||||||  |||| |||||||||||    
T  4868478 tttcataaactctctcaaacagtctcacaagtgcctatgtcaatagataaa 4868528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 6659677 - 6659627
Alignment:
Q  239 attttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||| ||| | ||||||||||||  |||||||||||||||||||||||    
T  6659677 attttatcttttgctatagaaatagtttatacataagcacttatatgataa 6659627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 23895319 - 23895257
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataaggg 292  Q
    ||||| |||||||||| ||| |||||||||||||   ||||||||  ||||||||||||||||    
T  23895319 tttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataaggg 23895257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 37593692 - 37593634
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcca 191  Q
    ||||||||||| ||| | ||||| |||| || |||||||||| ||||||||||||||||    
T  37593692 aacatgtcataagttgtgttcattagttttcccaaacagtctaacaagtgtttatgcca 37593634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 38170698 - 38170640
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcca 191  Q
    ||||||||||| | | |||||||||| |||| ||| |||||||||||||||| ||||||    
T  38170698 aacatgtcataagctgttttcataagctctcccaagcagtctcacaagtgttcatgcca 38170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 43372044 - 43372106
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||| |||||||| | | ||||||||||||| | ||||||||||  ||||||||||||    
T  43372044 aatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataag 43372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 2295175 - 2295251
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||||| |||||||||||||||    |||||||| ||||||| || | |||||||||| |||| |||||    
T  2295175 ttttcataagttctcccaaacagtctcacaa-aacttatgccagtagataagctcaaataagccaattcaaacaggcc 2295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 4768821 - 4768768
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||| |||||| || ||||| ||||||||||||||||||||| | ||||||||    
T  4768821 ttttcgtaagttttcccaaactgtctcacaagtgtttatgccagttgataaact 4768768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 2522696 - 2522744
Alignment:
Q  171 gtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    |||| |||||||||||||||| |||||||||| | ||||| ||||||||    
T  2522696 gtcttacaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 8780433 - 8780353
Alignment:
Q  132 aaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagcc 212  Q
    |||||||||||| ||| |||| ||||| ||||||||||||  ||||||||  ||| | || |||||||||| | |||||||    
T  8780433 aaacatgtcataagttgtttttataagctctctcaaacagattcacaagtagttacgacattagataaactcaaataagcc 8780353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 15687157 - 15687193
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatag 263  Q
    |||||| |||||||||||||||| |||||||||||||    
T  15687157 caatttaactttattttatattttgttatagaaatag 15687193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 18434565 - 18434621
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    |||||||||||||||| ||| ||||| |||||||   ||||| ||||||||||||||    
T  18434565 tttgactttattttatcttttgttatggaaataggtaatacagaagcacttatatga 18434621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 42336644 - 42336588
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgat 287  Q
    ||||||||||||||| ||| |||||| |||||  | ||||||||||||| |||||||    
T  42336644 ttgactttattttattttttgttataaaaataacctatacataagcactaatatgat 42336588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 43420320 - 43420404
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcc 217  Q
    ||||||||||| | | ||| |||||| |||| ||| |||||||||||||||||||| |  ||||||| || | |||||| |||||    
T  43420320 aacatgtcataagctgtttccataagatctcacaagcagtctcacaagtgtttatgtctgtagataagctcaaataagctaatcc 43420404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 52559913 - 52559965
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcactt 280  Q
    |||||||||||||||||||||| |||||||| ||| |  |||||| |||||||    
T  52559913 aatttgactttattttatattttgttatagatataatttatacatgagcactt 52559965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 25670594 - 25670528
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  25670594 aacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataa 25670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 30496690 - 30496629
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||| |||||    
T  30496690 caatttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgata 30496629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 36537970 - 36538027
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgcc 190  Q
    ||||||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||    
T  36537970 aacatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatgcc 36538027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 23214920 - 23215004
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||| ||| ||||||||| |||||||||||||||||| |||||||||||| | |||||||  | | ||||| |||||||||    
T  23214920 atgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 20547378 - 20547316
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaat 215  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||||| | ||||||||||    
T  20547378 cataagctctctcaaacagtatcacaagtgtttatgtcattagataaactaaaataagccaat 20547316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 3836688 - 3836604
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||| | | ||||||||||||||| |||||||| ||||||||| ||| |||| ||||||| || | ||||| |||||||||    
T  3836688 atgtcataagctattttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaa 3836604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 529443 - 529510
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    |||||||||||| |||| || ||||||||||||||||||| ||||||| || | ||||| ||||||||    
T  529443 tcataagttctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 753291 - 753350
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||||| |||||| ||||||||||||||  ||||| |||| ||||||||||||    
T  753291 tttgactttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataa 753350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 20526525 - 20526595
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||||||||||||||||||||||||   ||| | |||||||||||||| | ||||| |||||||||    
T  20526525 ttttcataagttctctcaaacagtctcacaa-aatttctaccaatagataaactcaaataagtcaatccaaa 20526595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 22387908 - 22387849
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatg 188  Q
    |||||||||| |||| ||| |||||||||| |||| |||||||||||||| |||||||||    
T  22387908 tataaacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatg 22387849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 46213783 - 46213728
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||    
T  46213783 gactttattttatattttgttatagaaatagcttttacataagcacttatatgata 46213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 8094364 - 8094434
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||||||| | | |||||||||  ||||||||| ||||||||||||| |||||| | |||||||    
T  8094364 tataaacatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataa 8094434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 33894690 - 33894776
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| | | |||||||||| |||| |||||||||||||||||| ||||| || | ||||| || | |||||| ||||||||    
T  33894690 acatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatttgataagctcaaataagctaatccaaa 33894776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 49060525 - 49060463
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||||| ||| |||||||||||||   ||||||||  ||||||||||||||    
T  49060525 aatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataag 49060463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 5373205 - 5373148
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||| ||| |||||||||||||   ||||||||||||||| ||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcacttacatgataag 5373148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 29275009 - 29275042
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgttta 186  Q
    ||||||||||||||||||||||||||||||||||    
T  29275009 cataagttctctcaaacagtctcacaagtgttta 29275042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 30751502 - 30751441
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||||||||||| |||| | |||||||  || || |||||||||||||||||    
T  30751502 aatttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgataa 30751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 24973930 - 24973870
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgat 287  Q
    |||||||| |||||||||| ||| |||||||||||||    ||||||||||||||||||||    
T  24973930 caatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 43250707 - 43250620
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaa-ctgagataagccaatccaaa 220  Q
    ||||||||||| | | |||||||||||  || |||||| | ||||||||||||||||||||| ||||| || | |||||||||||||||    
T  43250707 aacatgtcataagctgttttcataagtaatcccaaacaat-tcacaagtgtttatgccaatatataaagctcaaataagccaatccaaa 43250620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 6977498 - 6977565
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||| || |||||||| |||||||| || |||||||||||||||||||   ||||| |||||||||    
T  6977498 cataagctcactcaaacaatctcacaaatgcttatgccaatagataaactctaataagtcaatccaaa 6977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 7244685 - 7244626
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||| |||||| ||| | |||||||||||   |||||||||||||||||||||||    
T  7244685 tttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 30535625 - 30535680
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatg 188  Q
    ||||| ||||| ||| |||||||||||||||  |||||||||| ||||||||||||    
T  30535625 aacatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatg 30535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 35536093 - 35536030
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||  |||||||||||||   ||||||||||  ||||||||||||    
T  35536093 caatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataag 35536030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 45593806 - 45593865
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||||||||| ||| |||| ||||||||   ||||||||||| |||||||||||    
T  45593806 tttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataa 45593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 425815 - 425745
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    ||||| ||||||||| ||||||||  |||| ||| |||||||| ||||||| || | ||||||||||||||    
T  425815 ttttcgtaagttctcccaaacagtgccacatgtgcttatgccagtagataatctcaaataagccaatccaa 425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 1645712 - 1645622
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    ||||||||||||||| ||| ||| |||||||| || || |||||  ||||| || ||||| || |||||||||| | |||| |||||||||    
T  1645712 tataaacatgtcataagttgtttacataagttttcccagacagtgccacaattgcttatgtcagtagataaactaaaataatccaatccaa 1645622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 3241424 - 3241366
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||||||||||| ||||| |||||||||||||    || ||||||||||||||||||    
T  3241424 tttgactttattttttattttgttatagaaatagcttctatataagcacttatatgata 3241366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 17942149 - 17942187
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  17942149 ttttcataagttctctcagacagtctcacaggtgtttat 17942187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 27508320 - 27508278
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaatag 195  Q
    ||||| |||||||||||||||||||||||  ||||||||||||    
T  27508320 cataaattctctcaaacagtctcacaagtaattatgccaatag 27508278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 32410618 - 32410688
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaa 219  Q
    |||||||||||| |   ||||||| |||||| || |||||||||||||||| || | ||||||||||||||    
T  32410618 ttttcataagttattcaaaacagtttcacaaatgcttatgccaatagataagctcaaataagccaatccaa 32410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 33645973 - 33645899
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaac-agtctcacaagtgtttatgccaatagataaact 202  Q
    |||| |||||||||| ||| ||| |||||| |||||| ||| |||||||||||| |||| | |||||||||||||    
T  33645973 tatagacatgtcataagttgtttccataagctctctccaaccagtctcacaagtttttacgtcaatagataaact 33645899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 34754802 - 34754752
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||| |||| ||||||||||||||||| |||||||| || ||||||||||    
T  34754802 ttttcttaagctctctcaaacagtctcataagtgtttgtgtcaatagataa 34754752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 40687538 - 40687508
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaa 179  Q
    |||||||||||||||||||||||||||||||    
T  40687538 ttttcataagttctctcaaacagtctcacaa 40687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 27700145 - 27700076
Alignment:
Q  163 ctcaaacagtctcacaagtgtttatgccaatagataaactgagat-aagccaatccaaagaggcccaatt 231  Q
    ||||||||||||||| |||||| ||||||||| ||||||| | || || |||||||||| ||||| ||||    
T  27700145 ctcaaacagtctcactagtgttcatgccaataaataaacttaaataaaaccaatccaaataggccaaatt 27700076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 30749026 - 30748997
Alignment:
Q  149 ttttcataagttctctcaaacagtctcaca 178  Q
    ||||||||||||||||||||||||||||||    
T  30749026 ttttcataagttctctcaaacagtctcaca 30748997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 44808221 - 44808286
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||| |||||||||| ||| ||||||||||| |||| || |||||| |||| ||||    
T  44808221 acatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttatgctaataaataa 44808286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 47007025 - 47006972
Alignment:
Q  236 tttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||| || ||| |||||||||| |||  |||||||||||||||||||||||    
T  47007025 tttatttgatcttttgttatagaaaaagtttatacataagcacttatatgataa 47006972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 48131415 - 48131460
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaata 194  Q
    ||||||||||||||  |||||||||||| ||||| |||||||||||    
T  48131415 ttttcataagttcttccaaacagtctcataagtgcttatgccaata 48131460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 4970792 - 4970752
Alignment:
Q  140 catacgttcttttcataagttctctcaaacagtctcacaag 180  Q
    |||| ||| ||||||||||||||| ||||||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcacaag 4970752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 31341177 - 31341117
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| |||||| ||||||   ||||||||||| ||| ||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataag 31341117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 37832230 - 37832278
Alignment:
Q  234 actttattttatatttggttatagaaatagtccatacataagcacttat 282  Q
    |||||||||||||||| | ||||||||||||  ||||| ||||||||||    
T  37832230 actttattttatattttgctatagaaatagtttatacacaagcacttat 37832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 33737632 - 33737701
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||||| |||| ||| | ||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  33737632 aacatgccataagttgtgttcataagttctctcaaacagttgcacaagtgtttatgtcaatagataaact 33737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 2263249 - 2263317
Alignment:
Q  128 ctataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||| ||  ||||||||||| |||||||    
T  2263249 ctatgaacatgtcatatgttgttttcataagttctctcaaacagtttcttaagtgtttatgacaataga 2263317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 24774741 - 24774681
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||||||| ||||||||||||||  ||| ||||||||||| ||||||||    
T  24774741 tttgactttattttatattttgttatagaaatagtttatatataagcacttacatgataag 24774681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 13360717 - 13360658
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||    
T  13360717 ttgactttattttatattttgttatagaaatagtttgcacataagcacttatatgataag 13360658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 769200 - 769265
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagata 198  Q
    ||||||||||| | | |||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  769200 aacatgtcataagatgttttcataagttcatccaaacagtctcacaagtgtttataccaatagata 769265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 32171375 - 32171298
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    |||||||||| |||||||||||||||| |||||| ||||| |||||  ||| |||| ||||| ||||||||| |||||    
T  32171375 ttttcataagctctctcaaacagtctcgcaagtgcttatgtcaatacttaagctgaaataagacaatccaaacaggcc 32171298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 29269882 - 29269818
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataagg 291  Q
    ||||||||||||||||||| ||  ||||||||||||||  ||||| ||||| |||||||||||||    
T  29269882 caatttgactttattttatcttctgttatagaaatagtttatacacaagcatttatatgataagg 29269818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 26559247 - 26559160
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||| ||||| ||| ||||||||||||||  ||||||||||||||| || |||||||| ||| |||||| | |||||  ||||||||    
T  26559247 aacatatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 30863309 - 30863404
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcccaa 229  Q
    |||||||||| ||| |||||||||| |||  |||| ||||| ||||||||||||||||||| |||  || | ||||| || |||||| ||||||||    
T  30863309 acatgtcataagttgttttcataagctctaccaaagagtctaacaagtgtttatgccaataaataggctcaaataagtcactccaaacaggcccaa 30863404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 10452447 - 10452505
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||| |||||||||||||| |||||||||||||   ||||||||||||| ||||||||    
T  10452447 tttgattttattttatattttgttatagaaatagcttatacataagcactgatatgata 10452505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 32386647 - 32386709
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||| ||||||||| |||  |||  ||||||||| |||||||||||||||||||||||    
T  32386647 caatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatgataa 32386709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 35095011 - 35095073
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||| ||||||||||||| ||||||||||| ||  ||||||||  |||||||||||||    
T  35095011 caatttgacattattttatattttgttatagaaatggtttatacataattacttatatgataa 35095073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 32917260 - 32917313
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttat 187  Q
    |||||||||| ||| ||| |||||| |||| |||||||||||||||||||||||    
T  32917260 acatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttat 32917313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 2514685 - 2514625
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| |||  ||||||||||||   ||||||||||||||| ||||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataag 2514625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 29249445 - 29249397
Alignment:
Q  242 ttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||| |||||||||||||   ||||||||||||||||||||||||    
T  29249445 ttatattttgttatagaaatagctgatacataagcacttatatgataag 29249397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 32577993 - 32577925
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||||||||| ||| |||||||||| ||||||||||| | || ||||| ||||||||| |||| |||||    
T  32577993 acatgtcataagttgttttcataagctctctcaaacaatgtcccaagtatttatgccagtagagaaact 32577925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 33080590 - 33080490
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccca 228  Q
    ||||||||||||||| |||  ||||| || |||| | ||||| ||||||||||| |||||||| || |||| || | ||||||| ||||||| | |||||    
T  33080590 tataaacatgtcataagttggtttcagaaattctattaaacaatctcacaagtgcttatgccagtaaataagctcaaataagcctatccaaacatgccca 33080491  T
Q  229 a 229  Q
    |    
T  33080490 a 33080490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 33116647 - 33116695
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtg 182  Q
    |||||||||| ||| ||||||||| ||| ||||||||||||||||||||    
T  33116647 acatgtcataagttgttttcataaattccctcaaacagtctcacaagtg 33116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2460158 - 2460111
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagt 181  Q
    |||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  2460158 acatgtcataagttgtttccataagctctctcaaacagtctcacaagt 2460111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 2735148 - 2735195
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||||||||||| |||||||||||||||||  ||||||||||| ||||    
T  2735148 ttttcataagttatctcaaacagtctcacagatgtttatgccactaga 2735195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 4248944 - 4248885
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    ||||||||||||||||||| ||| ||||| |||||||   ||| ||||||||||||||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 8349748 - 8349811
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||| |||||||||||| ||| |||| |||||||||  ||||| || |||||||||||||||    
T  8349748 caatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataag 8349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 10016701 - 10016772
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||| || ||||| ||| |||||||||||||||||||||  ||||||| || | |||| ||||||||||    
T  10016701 ttttcattagctctctgaaatagtctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaa 10016772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 29274313 - 29274376
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||| | |||||||||||   ||||||||||| || |||||||||    
T  29274313 caatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 33787829 - 33787876
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataa 274  Q
    |||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  33787829 caatttgactttgttttatattttgttatagaaatagtttatacataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 33832285 - 33832238
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctca 176  Q
    ||||||||||||||| ||| |||||||||||||||| |||||| ||||    
T  33832285 tataaacatgtcataagttgttttcataagttctcttaaacagactca 33832238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 1852508 - 1852565
Alignment:
Q  229 atttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||| ||||| ||| ||||||||||||||   || |||||||||||||||||||    
T  1852508 atttgactttaatttatttttcgttatagaaatagt---tatataagcacttatatgataa 1852565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 5551448 - 5551387
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||||||||||| ||| |||||| |||||| | |||||||| ||||||| ||||||    
T  5551448 caatttgactttattttatcttttgttatataaatag-ctatacataatcacttatgtgataa 5551387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 9202982 - 9202952
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaa 179  Q
    |||||||||||||||||||||||||||||||    
T  9202982 ttttcataagttctctcaaacagtctcacaa 9202952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 9559543 - 9559462
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||| ||| ||||||||||||||| |||| ||||||| ||   ||||||||||||||||| |  |  ||||||||||||||    
T  9559543 atgtcataagttgttttcataagttctcccaaatagtctcaaaa---tttatgccaatagataagcgcaactaagccaatccaaa 9559462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 31668781 - 31668831
Alignment:
Q  239 attttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||| ||| |||||||||||||   |||||||||||||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatgataa 31668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 6742955 - 6742910
Alignment:
Q  57 attgatttatttgcgcttacctgctagcataatcacatgtgagact 102  Q
    ||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  6742955 attgacttatttgagcttacctactagcataatcacttgtgagact 6742910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 7714011 - 7713950
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    ||||||||||||||||||| ||| |||||  || ||||  |||||||||| |||||||||||    
T  7714011 caatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgata 7713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 8010457 - 8010506
Alignment:
Q  171 gtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||| ||||||||||||||||||| || | ||||| |||||||||    
T  8010457 gtctcacaaatgtttatgccaatagataagctcacataagtcaatccaaa 8010506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 8420184 - 8420139
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||||    
T  8420184 ataagctctcactaacagtctcacaagtgtttatgtcaatagataa 8420139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 31686375 - 31686322
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtg 182  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||| | |||||||||    
T  31686375 tataaacttgtcataagttgttttgataagttctctcaaacaatgtcacaagtg 31686322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 33500487 - 33500422
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||||  || |||||||||| || ||||||||||||||| ||||| ||||| | |||||||    
T  33500487 acatgtcataaattgttttcataagctccctcaaacagtctcacgagtgtgtatgctagtagataa 33500422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 2727868 - 2727804
Alignment:
Q  156 aagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||  |||||||| |||||||||||||||| | ||||||| || | | |||||||||||||    
T  2727868 aagttctaacaaacagtgtcacaagtgtttatgcgattagataagctcaaacaagccaatccaaa 2727804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 5884947 - 5885003
Alignment:
Q  232 tgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||| ||||||| ||| |||||||||||| |  ||||||| ||||||||||||||    
T  5884947 tgacttcattttattttttgttatagaaataatttatacatatgcacttatatgata 5885003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 7351699 - 7351755
Alignment:
Q  234 actttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||| ||  ||||| |||||||  ||||||||||| ||||||||||||    
T  7351699 actttattttatagtttattatataaatagtttatacataagcatttatatgataag 7351755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 19752813 - 19752765
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtg 182  Q
    |||| ||||||||| |||| ||||| ||||||||| |||||||||||||    
T  19752813 acatatcatacgttgtttttataagctctctcaaatagtctcacaagtg 19752765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 27595575 - 27595519
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||| ||| ||| ||||| ||||| |||||||||||| ||||| ||||||    
T  27595575 aacatgtcataagttgtttccataaattctcccaaacagtctcataagtgcttatgc 27595519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 27693447 - 27693399
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagt 181  Q
    ||||||||||| ||| ||| ||||| |||||||||| ||||||||||||    
T  27693447 aacatgtcataagttgtttccataaattctctcaaatagtctcacaagt 27693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 31668435 - 31668475
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  31668435 ttttcataagctctctctaatagtctcacaagtgtttatgc 31668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 32975961 - 32975905
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    |||||||||||||||||||| |||| |||||||    |||||||| |||||||||||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatga 32975905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 34403917 - 34403973
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgc 189  Q
    ||||||||||| ||| ||||| ||| |||||  ||||||||| ||||||||||||||    
T  34403917 aacatgtcataagttgttttcttaacttctcctaaacagtctaacaagtgtttatgc 34403973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 6721 - 6784
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||| | ||||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  6721 caatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 6784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 20162 - 20111
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcactta 281  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  20162 tttgactttattttatctttggttatagaaatagtatatacataagcactta 20111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 116640 - 116703
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||| | ||||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  116640 caatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 116703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 35095867 - 35095930
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||| ||||||||||||||  | | ||||||||||||||||||||    
T  35095867 caatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataag 35095930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 12407722 - 12407672
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  12407722 ttttcataagctctctcaaaccgtctcacaagtgtttatgtcaatagataa 12407672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 19177534 - 19177594
Alignment:
Q  160 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| |||||||||||||||||||| |||||||||| |||||| | ||||| |||||||||    
T  19177534 tctcccaaacagtctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaa 19177594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 37063161 - 37063217
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatga 286  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||||||| ||||||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagcatttatatga 37063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 10771868 - 10771809
Alignment:
Q  161 ctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| ||||||||||| |||||||| ||||||| || | |||||||||||||||    
T  10771868 ctctcaaacaatctcacaagtgcttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 12460009 - 12459922
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||| ||| |||||||| |||||| |||||||||||||| ||| ||||| ||  |||||| | || ||||| |||||||||    
T  12460009 aacatgtcataagttgttttcataggttctcccaaacagtctcacaggtgcttatgtcagcagataagccgaaataagtcaatccaaa 12459922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 20982223 - 20982282
Alignment:
Q  231 ttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||  || |||||||||||||   ||||||||||||||||||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataag 20982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 21782645 - 21782598
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  21782645 tcataagctctctcaaacagcctcacaagtgtttatgccagtagataa 21782598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 11297203 - 11297117
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||| || ||| ||| |||||| ||| ||||||||||| |||||||||||||||| ||||||| || | ||||| |||| ||||    
T  11297203 acatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagcttaaataagtcaattcaaa 11297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 28586853 - 28586911
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||||||||||||| ||| ||||||||||||||  |||||||| ||| |||||||||    
T  28586853 tttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgata 28586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 29336699 - 29336761
Alignment:
Q  140 catacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||| ||| ||| |||||| |||||||| |||||||||||||| || ||||||||||||||||    
T  29336699 cataagttgtttccataagctctctcaatcagtctcacaagtgcttttgccaatagataaact 29336761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 7096214 - 7096271
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgat 287  Q
    |||||||||||||||| ||| |||||||||||||   |||||||||||||| ||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 11457161 - 11457226
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||||||||| ||| ||| |||||| |||   |||||||||||||||||||| |||||||||||||    
T  11457161 acatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataa 11457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 36326092 - 36326157
Alignment:
Q  155 taagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||| ||||||||| |||||| |||| |||||||||||||||| || | ||||| |||||||||    
T  36326092 taagttttctcaaacaatctcaccagtgcttatgccaatagataagctaaaataagacaatccaaa 36326157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 40335849 - 40335788
Alignment:
Q  165 caaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    ||||||||||||||||||||| ||| | |||||||||| | ||||| ||||||||| |||||    
T  40335849 caaacagtctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggcc 40335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 5377189 - 5377121
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatcc 217  Q
    |||||||||||| || | |||||||| ||||||| ||||| |||||||||| || | ||||||||||||    
T  5377189 ttttcataagttatcgctaacagtcttacaagtgcttatgtcaatagataagctcaaataagccaatcc 5377121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 7907953 - 7908013
Alignment:
Q  142 tacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    |||||| ||||||||||||||  |||||||||||| |||||||||||  | ||||||||||    
T  7907953 tacgttgttttcataagttcttccaaacagtctcataagtgtttatgttattagataaact 7908013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 10907441 - 10907501
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaata 194  Q
    ||||| |||| ||| |||||||||| |||  |||||||||||||||||||| |||||||||    
T  10907441 acatgacataagttgttttcataagctcttccaaacagtctcacaagtgttcatgccaata 10907501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 32194169 - 32194229
Alignment:
Q  231 ttgactttattttatatttggttat-agaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||||| |||| ||||  || |||||||||||||||||||||    
T  32194169 ttgactttattttatattttgttataagaagtagtgtatgcataagcacttatatgataag 32194229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 32849244 - 32849328
Alignment:
Q  137 tgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaag 221  Q
    ||||||| ||| ||||||||||||||| ||||||| |||||||||| |||||  | ||||||| || | ||||| |||| |||||    
T  32849244 tgtcataagtttttttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataagtcaattcaaag 32849328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 912639 - 912568
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||||||||   |||||||  |||||||| ||||| |||||||||| || | |||||||||||||||    
T  912639 ttttcataagttcttctaaacagtgccacaagtgcttatgacaatagataacctaaaataagccaatccaaa 912568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 4273365 - 4273322
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaataga 196  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||    
T  4273365 cataggttctctcaaacaatctcacaaatgtttatgccaataga 4273322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 19177051 - 19177118
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaac 201  Q
    |||||||||  ||| ||||||| || ||||||||||| ||| |||||||||||| |||| ||||||||    
T  19177051 acatgtcatcggttgttttcattagctctctcaaacaatctgacaagtgtttataccaagagataaac 19177118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 25720409 - 25720338
Alignment:
Q  149 ttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||| ||||| ||||||| ||||||||||||||| |||||||| ||||||| || | |||||| ||| ||||    
T  25720409 tttttataagctctctcagacagtctcacaagtgcttatgccagtagataacctcaaataagctaattcaaa 25720338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 29588856 - 29588809
Alignment:
Q  237 ttattttatatttggttatagaaatagtccatacataagcacttatat 284  Q
    ||||||||||||| |||||||||||||   ||||||||||||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagcacttatat 29588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 38036047 - 38036008
Alignment:
Q  153 cataagttctctcaaacagtctcacaagtgtttatgccaa 192  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  38036047 cataagttctcccaaacagtttcacaagtgtttatgccaa 38036008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 4619769 - 4619863
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 227  Q
    ||||||||||  ||| |||||||||| |||| |||||||| |  |||||| ||||| ||  | ||||||  | ||||||||||||||||||||||    
T  4619769 aacatgtcattagttgttttcataagctctcccaaacagtgttgcaagtgcttatgtcagcaaataaacacaaataagccaatccaaagaggccc 4619863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 10125726 - 10125644
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaat 215  Q
    ||||||||||| ||| ||| |||||||||||||| ||| | ||||||||| | ||| || ||||||| || | ||||||||||    
T  10125726 aacatgtcataagttgtttacataagttctctcagacaatgtcacaagtgctcatgtcagtagataagcttaaataagccaat 10125644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 11095502 - 11095416
Alignment:
Q  134 acatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    |||||||||| | | ||| || ||||||||||||||| | ||||||||||||||| || ||||||| || | |||| ||| ||||||    
T  11095502 acatgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataaaccagtccaaa 11095416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 17756813 - 17756875
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||||||||||||||||| ||  |||| ||||| |   ||||||||||||||||||||||||    
T  17756813 caatttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatgataa 17756875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 26516275 - 26516221
Alignment:
Q  236 tttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||| ||| ||| |||||||||   ||||||||||||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataag 26516221  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37526207 - 37526161
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaa 179  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  37526207 aacatgtcataggttgtattcataagctctctcaaacagtctcacaa 37526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 37611223 - 37611157
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||| | ||| |||||||||| ||||||||||| ||||||||||  || ||||| |||||||    
T  37611223 aacatgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataa 37611157  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37690644 - 37690598
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaa 179  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  37690644 aacatgtcataggttgtattcataagctctctcaaacagtctcacaa 37690598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 37787953 - 37787887
Alignment:
Q  133 aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||| | ||| |||||||||| ||||||||||| ||||||||||  || ||||| |||||||    
T  37787953 aacatgtcacaagttgttttcataagctctctcaaacaatctcacaagtacttgtgccagtagataa 37787887  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 42100377 - 42100466
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggcc 226  Q
    |||||||| | | |||||| ||||||||||| |||||| |||||   ||||||||||||||||| || | ||||||| ||||||| |||||    
T  42100377 atgtcataagctattttcacaagttctctcacacagtcacacaaaa-tttatgccaatagataagctcaaataagcccatccaaacaggcc 42100466  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 10303787 - 10303750
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagt 264  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  10303787 caatttgactttattttatcttttgttatagaaatagt 10303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 13224406 - 13224353
Alignment:
Q  236 tttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||||||||| ||| |||||||||||||   |||||||||||||| ||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 19113202 - 19113263
Alignment:
Q  228 aatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    |||| ||| ||||||||| ||| |||||| |||||||  ||||||||||| |||||||||||    
T  19113202 aattcgacattattttattttttgttataaaaatagtttatacataagcaattatatgataa 19113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 39128625 - 39128568
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatat 284  Q
    ||||||||||||||||||| ||| ||||||||| |||   |||||||||||| |||||    
T  39128625 caatttgactttattttatcttttgttatagaattagcttatacataagcacatatat 39128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 444010 - 444050
Alignment:
Q  159 ttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||| ||||||||||||||||||||||||| | |||||||    
T  444010 ttctcccaaacagtctcacaagtgtttatgcaattagataa 444050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 4855778 - 4855810
Alignment:
Q  154 ataagttctctcaaacagtctcacaagtgttta 186  Q
    ||||| |||||||||||||||||||||||||||    
T  4855778 ataagctctctcaaacagtctcacaagtgttta 4855810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 11684398 - 11684346
Alignment:
Q  238 tattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||| |||||| ||||||   |||||| |||||||||||||||||    
T  11684398 tattttatattttgttataaaaatagcttatacattagcacttatatgataag 11684346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 19177459 - 19177403
Alignment:
Q  233 gactttattttatatttggttatagaaatagtccatacataagcacttatatgataa 289  Q
    ||||| ||||||| ||  ||| ||||||||||  |||||||||||||||||||||||    
T  19177459 gacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataa 19177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 31694501 - 31694441
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||| ||||| ||| |||||||| ||||   || |||||||||||||||||||||    
T  31694501 tttgactttagtttatgttttgttatagacatagcttattcataagcacttatatgataag 31694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 35135749 - 35135809
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||||||||||| ||| ||||||||||||    |||||||| |||||||||| ||||    
T  35135749 tttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaag 35135809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 38728466 - 38728530
Alignment:
Q  135 catgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    ||||||||| | | |||||||||| |||| |||||| || |||| |||||||| |||||||||||    
T  38728466 catgtcataagctattttcataagctctcccaaacaatcacacaggtgtttataccaatagataa 38728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 1161 - 1219
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||||||||||||| ||| |||||||||||||   ||||||||||||||||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 2814 - 2756
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgata 288  Q
    |||||||||||||||| ||| |||||||||||||   ||||||||||||||||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 6891 - 6941
Alignment:
Q  152 tcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 202  Q
    ||||||| |||| ||||||||||||||||||||||||| | ||||||||||    
T  6891 tcataagctctcccaaacagtctcacaagtgtttatgctagtagataaact 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 6611 - 6695
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||  || |||||||||  |||||||||| |||||||||||| |||| |||||| |||| || | ||||| |||||||||    
T  6611 atgtcataacttgttttcataatctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatccaaa 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 6609 - 6693
Alignment:
Q  136 atgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaa 220  Q
    ||||||||  || |||||||||  |||||||||| |||||||||||| |||| |||||| |||| || | ||||| |||||||||    
T  6609 atgtcataacttgttttcataatctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatccaaa 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 27562 - 27499
Alignment:
Q  227 caatttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    ||||||||||||||||||| ||  ||||||||||||    ||||||||||||||| ||||||||    
T  27562 caatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataag 27499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 68991 - 68921
Alignment:
Q  129 tataaacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataa 199  Q
    |||| |||||||||||| | |||||||||||| || |||||| ||||| ||||| ||||||| ||| ||||    
T  68991 tatagacatgtcatacgctgttttcataagttttcccaaacactctcataagtgcttatgcctatatataa 68921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 9862 - 9922
Alignment:
Q  230 tttgactttattttatatttggttatagaaatagtccatacataagcacttatatgataag 290  Q
    |||||||| ||||||| ||| ||||||||||||    |||||||||||| |||||||||||    
T  9862 tttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataag 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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