View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18633_high_16 (Length: 298)
Name: NF18633_high_16
Description: NF18633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18633_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 56 - 281
Target Start/End: Complemental strand, 6693994 - 6693768
Alignment:
| Q |
56 |
ttcttttcacaattgacttgataaaatgcgtttttaaacattcactcctttcacgtcatcacagacagtgtgagtgaagg-ttcatttgtttgttattga |
154 |
Q |
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| T |
6693994 |
ttcttttcacaattgacttgataaaatgcgtttttaaacattcactcctttcacgtcatcacagacggtgtgagtgaagtattcatttgtttgttattga |
6693895 |
T |
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| Q |
155 |
tggcattaggaggaattatccatttcaacactctcttcatgcaccaaccactaacacacttacaccgtttcaagccccatttcttctcaactccaccacc |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6693894 |
tggcattaggaggaattatccatttcaacactctcttcatgcaccaaccactaacacacttacaccgtttcaagccccatttcttctcaactccaccacc |
6693795 |
T |
|
| Q |
255 |
caattccccaatttctctaaagtcatc |
281 |
Q |
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| T |
6693794 |
caattccccaatttctctaaagtcatc |
6693768 |
T |
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