View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18633_low_13 (Length: 363)

Name: NF18633_low_13
Description: NF18633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18633_low_13
NF18633_low_13
[»] chr5 (46 HSPs)
chr5 (17-288)||(5103943-5104208)
chr5 (232-288)||(38452338-38452394)
chr5 (233-285)||(45449-45501)
chr5 (232-288)||(4736484-4736540)
chr5 (229-277)||(12145136-12145184)
chr5 (232-288)||(20690735-20690791)
chr5 (232-288)||(32108810-32108866)
chr5 (230-288)||(6912799-6912857)
chr5 (226-288)||(35609299-35609361)
chr5 (232-278)||(37271658-37271704)
chr5 (227-288)||(42553639-42553700)
chr5 (232-288)||(45140-45196)
chr5 (232-288)||(1104860-1104916)
chr5 (232-288)||(1381249-1381305)
chr5 (232-288)||(4203712-4203768)
chr5 (232-288)||(18046040-18046096)
chr5 (232-288)||(31037683-31037739)
chr5 (232-288)||(35928400-35928456)
chr5 (232-288)||(36973652-36973708)
chr5 (232-288)||(40167950-40168006)
chr5 (232-287)||(30888162-30888217)
chr5 (231-278)||(35609589-35609636)
chr5 (232-278)||(5614168-5614214)
chr5 (232-278)||(5917128-5917174)
chr5 (232-278)||(18258479-18258525)
chr5 (232-278)||(19565469-19565515)
chr5 (232-278)||(19685019-19685065)
chr5 (232-278)||(20986041-20986087)
chr5 (232-278)||(31602467-31602513)
chr5 (232-278)||(35877004-35877050)
chr5 (232-278)||(38496734-38496780)
chr5 (320-353)||(45388-45421)
chr5 (232-285)||(10409271-10409324)
chr5 (320-353)||(12145128-12145161)
chr5 (320-353)||(20690755-20690788)
chr5 (232-285)||(25561944-25561997)
chr5 (320-353)||(28213455-28213488)
chr5 (232-281)||(40038496-40038545)
chr5 (320-353)||(42553664-42553697)
chr5 (232-288)||(5904010-5904066)
chr5 (232-288)||(10743996-10744052)
chr5 (232-288)||(17070537-17070592)
chr5 (232-288)||(21050855-21050911)
chr5 (232-288)||(26133355-26133411)
chr5 (232-288)||(36577724-36577780)
chr5 (232-280)||(42994070-42994118)
[»] chr3 (65 HSPs)
chr3 (233-288)||(863594-863649)
chr3 (230-288)||(19297891-19297949)
chr3 (232-288)||(20644507-20644563)
chr3 (232-288)||(28418842-28418898)
chr3 (232-288)||(29490685-29490741)
chr3 (232-288)||(45313805-45313861)
chr3 (230-281)||(2486851-2486902)
chr3 (232-278)||(46622081-46622127)
chr3 (231-288)||(45006191-45006248)
chr3 (227-288)||(50261878-50261939)
chr3 (232-288)||(863283-863339)
chr3 (232-288)||(4034719-4034775)
chr3 (232-288)||(7588320-7588376)
chr3 (232-288)||(12741213-12741269)
chr3 (232-288)||(26090020-26090076)
chr3 (228-288)||(29955296-29955356)
chr3 (228-288)||(30004450-30004510)
chr3 (232-288)||(47336523-47336579)
chr3 (232-288)||(50009226-50009282)
chr3 (232-288)||(51550388-51550444)
chr3 (232-288)||(54608805-54608861)
chr3 (233-288)||(4322131-4322186)
chr3 (232-271)||(32119222-32119261)
chr3 (233-288)||(35569078-35569133)
chr3 (232-271)||(47114762-47114801)
chr3 (232-278)||(474046-474092)
chr3 (232-278)||(474360-474406)
chr3 (232-278)||(12740909-12740955)
chr3 (232-278)||(19656543-19656589)
chr3 (232-278)||(21159455-21159501)
chr3 (232-278)||(22155931-22155977)
chr3 (232-278)||(25610082-25610128)
chr3 (232-278)||(30552430-30552476)
chr3 (232-278)||(38232243-38232289)
chr3 (232-278)||(40169606-40169652)
chr3 (232-278)||(43441272-43441318)
chr3 (320-349)||(7957116-7957145)
chr3 (233-278)||(8555260-8555305)
chr3 (320-349)||(20644587-20644616)
chr3 (320-349)||(25610020-25610049)
chr3 (235-288)||(25710515-25710568)
chr3 (320-353)||(29490688-29490721)
chr3 (324-353)||(35177341-35177370)
chr3 (320-349)||(39132796-39132825)
chr3 (232-285)||(39288575-39288628)
chr3 (320-353)||(39288595-39288628)
chr3 (320-353)||(40545724-40545757)
chr3 (233-278)||(45005889-45005934)
chr3 (320-353)||(45161135-45161168)
chr3 (320-353)||(47114699-47114732)
chr3 (232-277)||(53113445-53113490)
chr3 (232-288)||(4814542-4814598)
chr3 (232-288)||(22008528-22008584)
chr3 (232-288)||(22016046-22016102)
chr3 (232-288)||(29678026-29678082)
chr3 (236-288)||(29686550-29686602)
chr3 (229-281)||(30034106-30034158)
chr3 (232-288)||(30034414-30034470)
chr3 (232-288)||(35177257-35177313)
chr3 (232-288)||(39072155-39072211)
chr3 (232-288)||(45313502-45313558)
chr3 (232-288)||(46724844-46724900)
chr3 (232-288)||(47005156-47005212)
chr3 (232-284)||(52342197-52342249)
chr3 (232-288)||(53701605-53701661)
[»] chr7 (56 HSPs)
chr7 (230-288)||(6847061-6847119)
chr7 (232-288)||(34878067-34878123)
chr7 (232-288)||(35469882-35469938)
chr7 (232-288)||(46304326-46304382)
chr7 (233-288)||(31503725-31503780)
chr7 (318-353)||(36684706-36684741)
chr7 (233-288)||(39520672-39520727)
chr7 (232-286)||(1559345-1559399)
chr7 (232-278)||(19005600-19005646)
chr7 (231-288)||(43058751-43058808)
chr7 (232-288)||(1974011-1974067)
chr7 (232-288)||(25547432-25547488)
chr7 (232-288)||(27458401-27458457)
chr7 (232-288)||(31732103-31732159)
chr7 (232-288)||(35838279-35838335)
chr7 (232-288)||(39520400-39520456)
chr7 (232-278)||(1614561-1614607)
chr7 (232-278)||(3807866-3807912)
chr7 (232-278)||(8144297-8144343)
chr7 (232-278)||(9659357-9659403)
chr7 (232-278)||(14738956-14739002)
chr7 (232-278)||(19783817-19783863)
chr7 (232-278)||(23399928-23399974)
chr7 (232-278)||(25092162-25092208)
chr7 (232-278)||(25988387-25988433)
chr7 (230-288)||(28263013-28263071)
chr7 (232-278)||(30223747-30223793)
chr7 (232-278)||(30352856-30352902)
chr7 (320-354)||(30709588-30709622)
chr7 (232-278)||(31732403-31732449)
chr7 (232-278)||(35104080-35104126)
chr7 (232-278)||(35837926-35837972)
chr7 (232-278)||(46759660-46759706)
chr7 (320-353)||(3808064-3808097)
chr7 (320-349)||(19005827-19005856)
chr7 (233-278)||(23676135-23676180)
chr7 (233-278)||(38186369-38186414)
chr7 (320-353)||(38486678-38486711)
chr7 (320-352)||(1271485-1271517)
chr7 (232-288)||(6079811-6079867)
chr7 (232-288)||(12932725-12932781)
chr7 (232-288)||(19561392-19561448)
chr7 (321-349)||(20355498-20355526)
chr7 (318-354)||(26877698-26877734)
chr7 (318-346)||(28529161-28529189)
chr7 (232-288)||(35210457-35210513)
chr7 (321-349)||(35665958-35665986)
chr7 (320-352)||(38186706-38186738)
chr7 (232-288)||(39832908-39832964)
chr7 (232-288)||(41053844-41053900)
chr7 (232-288)||(44344731-44344787)
chr7 (320-348)||(44841437-44841465)
chr7 (232-288)||(45073583-45073639)
chr7 (232-288)||(46759884-46759940)
chr7 (232-288)||(46828946-46829002)
chr7 (232-288)||(48854012-48854068)
[»] chr6 (43 HSPs)
chr6 (226-288)||(19320763-19320825)
chr6 (232-288)||(8169789-8169845)
chr6 (232-288)||(15722612-15722668)
chr6 (232-288)||(31276282-31276338)
chr6 (243-288)||(11925752-11925797)
chr6 (320-353)||(27765059-27765092)
chr6 (232-288)||(10910906-10910962)
chr6 (232-288)||(12757612-12757668)
chr6 (232-288)||(14656202-14656258)
chr6 (232-288)||(17765011-17765067)
chr6 (232-288)||(19690395-19690451)
chr6 (232-288)||(25121438-25121494)
chr6 (233-288)||(10091039-10091094)
chr6 (232-278)||(317814-317860)
chr6 (232-278)||(3276306-3276352)
chr6 (232-278)||(3968647-3968693)
chr6 (232-278)||(6412220-6412266)
chr6 (232-278)||(6412531-6412577)
chr6 (242-288)||(6564886-6564932)
chr6 (232-278)||(8170103-8170149)
chr6 (230-288)||(13617529-13617587)
chr6 (320-354)||(19129404-19129438)
chr6 (321-351)||(19690477-19690507)
chr6 (232-278)||(21385253-21385299)
chr6 (232-278)||(22543670-22543716)
chr6 (232-278)||(24901241-24901287)
chr6 (232-281)||(494701-494750)
chr6 (320-353)||(6564889-6564922)
chr6 (320-349)||(13268191-13268220)
chr6 (320-353)||(19275181-19275214)
chr6 (233-278)||(20467354-20467399)
chr6 (232-288)||(318039-318095)
chr6 (321-349)||(12298901-12298929)
chr6 (230-278)||(14428902-14428950)
chr6 (232-288)||(18024317-18024373)
chr6 (232-288)||(21993789-21993845)
chr6 (232-288)||(23502482-23502538)
chr6 (232-288)||(23770163-23770219)
chr6 (320-352)||(25121205-25121237)
chr6 (232-288)||(25431796-25431852)
chr6 (232-288)||(26375695-26375751)
chr6 (232-288)||(30479364-30479420)
chr6 (232-288)||(30928683-30928739)
[»] chr2 (48 HSPs)
chr2 (226-288)||(146632-146694)
chr2 (232-288)||(31644843-31644899)
chr2 (232-288)||(37228735-37228791)
chr2 (232-288)||(44559351-44559407)
chr2 (233-288)||(3832579-3832634)
chr2 (224-266)||(25300004-25300046)
chr2 (232-278)||(36815787-36815833)
chr2 (320-353)||(11788135-11788168)
chr2 (232-288)||(4424127-4424183)
chr2 (321-353)||(5164381-5164413)
chr2 (232-288)||(10375011-10375067)
chr2 (232-288)||(13215062-13215118)
chr2 (232-288)||(20939267-20939323)
chr2 (232-288)||(25705087-25705143)
chr2 (232-288)||(29182170-29182226)
chr2 (232-288)||(41693676-41693732)
chr2 (232-288)||(44559064-44559120)
chr2 (233-288)||(26238816-26238871)
chr2 (232-287)||(34963797-34963852)
chr2 (232-278)||(3671005-3671051)
chr2 (232-278)||(20131319-20131365)
chr2 (232-278)||(26239112-26239158)
chr2 (232-278)||(31225717-31225763)
chr2 (232-278)||(33576069-33576115)
chr2 (234-288)||(36806838-36806892)
chr2 (232-278)||(41451839-41451885)
chr2 (232-278)||(42695870-42695916)
chr2 (320-349)||(1138064-1138093)
chr2 (320-353)||(3832353-3832386)
chr2 (320-349)||(13215314-13215343)
chr2 (320-353)||(17912471-17912504)
chr2 (232-281)||(29831816-29831865)
chr2 (320-353)||(31644863-31644896)
chr2 (320-353)||(34964046-34964079)
chr2 (232-285)||(38639414-38639467)
chr2 (320-353)||(38639434-38639467)
chr2 (320-353)||(44559354-44559387)
chr2 (230-278)||(146326-146374)
chr2 (232-288)||(1497612-1497668)
chr2 (232-288)||(3837935-3837991)
chr2 (232-288)||(10664986-10665042)
chr2 (232-288)||(11713487-11713543)
chr2 (232-288)||(11788358-11788414)
chr2 (232-288)||(17302085-17302141)
chr2 (232-288)||(36622252-36622308)
chr2 (232-288)||(38731831-38731887)
chr2 (232-288)||(43672260-43672316)
chr2 (232-280)||(45442318-45442366)
[»] chr4 (67 HSPs)
chr4 (232-281)||(28449163-28449212)
chr4 (232-288)||(11693063-11693119)
chr4 (232-288)||(19321801-19321857)
chr4 (233-288)||(54208767-54208822)
chr4 (230-288)||(43368465-43368523)
chr4 (229-278)||(19903607-19903656)
chr4 (232-277)||(51738364-51738409)
chr4 (232-288)||(7639898-7639954)
chr4 (232-288)||(13073761-13073817)
chr4 (232-288)||(13631230-13631286)
chr4 (232-288)||(19903263-19903319)
chr4 (232-288)||(22099854-22099910)
chr4 (232-288)||(22584289-22584345)
chr4 (232-288)||(25423926-25423982)
chr4 (232-288)||(25424254-25424310)
chr4 (232-288)||(35464020-35464076)
chr4 (232-288)||(36702002-36702058)
chr4 (232-288)||(52441765-52441821)
chr4 (229-288)||(35420645-35420704)
chr4 (232-278)||(8904888-8904934)
chr4 (232-278)||(13530381-13530427)
chr4 (232-278)||(13764759-13764805)
chr4 (232-278)||(14791758-14791804)
chr4 (232-278)||(15555590-15555636)
chr4 (232-278)||(29420489-29420535)
chr4 (225-287)||(30564828-30564890)
chr4 (232-278)||(42824043-42824089)
chr4 (232-278)||(43231090-43231136)
chr4 (232-278)||(47023057-47023103)
chr4 (232-278)||(52543424-52543470)
chr4 (232-278)||(53915685-53915731)
chr4 (232-278)||(53915999-53916045)
chr4 (320-353)||(2322317-2322350)
chr4 (320-353)||(12152378-12152411)
chr4 (320-349)||(12152442-12152471)
chr4 (232-277)||(12152446-12152491)
chr4 (320-349)||(14594456-14594485)
chr4 (320-349)||(20144501-20144530)
chr4 (320-353)||(22099857-22099890)
chr4 (232-277)||(29380670-29380715)
chr4 (320-349)||(29380690-29380719)
chr4 (227-288)||(31560637-31560698)
chr4 (219-288)||(31811914-31811983)
chr4 (233-278)||(47022743-47022788)
chr4 (320-353)||(53307836-53307869)
chr4 (320-353)||(54208770-54208803)
chr4 (320-349)||(54903365-54903394)
chr4 (232-288)||(5827657-5827713)
chr4 (232-288)||(8760606-8760662)
chr4 (232-288)||(13064161-13064217)
chr4 (232-288)||(13479553-13479609)
chr4 (232-272)||(13764615-13764655)
chr4 (232-288)||(14488129-14488185)
chr4 (230-278)||(18205475-18205523)
chr4 (232-288)||(20144673-20144729)
chr4 (321-353)||(22584310-22584342)
chr4 (232-288)||(23245537-23245593)
chr4 (232-288)||(26313990-26314046)
chr4 (226-278)||(27008080-27008132)
chr4 (232-288)||(28809013-28809069)
chr4 (232-288)||(31812155-31812211)
chr4 (232-288)||(37557137-37557193)
chr4 (232-288)||(42848029-42848085)
chr4 (232-288)||(44925487-44925543)
chr4 (226-278)||(50714517-50714569)
chr4 (232-288)||(52442034-52442090)
chr4 (232-288)||(53308010-53308066)
[»] chr8 (55 HSPs)
chr8 (232-288)||(36044734-36044790)
chr8 (232-281)||(42132866-42132915)
chr8 (232-288)||(4621296-4621352)
chr8 (232-288)||(7185946-7186002)
chr8 (232-288)||(7272422-7272478)
chr8 (232-288)||(8298589-8298645)
chr8 (232-288)||(8298917-8298973)
chr8 (232-288)||(9832217-9832273)
chr8 (232-288)||(10337121-10337177)
chr8 (232-288)||(14489015-14489071)
chr8 (232-288)||(22650466-22650522)
chr8 (232-288)||(25600539-25600595)
chr8 (232-288)||(27117755-27117811)
chr8 (232-288)||(30969400-30969456)
chr8 (232-288)||(42133096-42133152)
chr8 (224-271)||(1407999-1408046)
chr8 (233-288)||(13232201-13232256)
chr8 (232-287)||(21125721-21125776)
chr8 (232-278)||(1162911-1162957)
chr8 (232-278)||(1778566-1778612)
chr8 (242-288)||(1778871-1778917)
chr8 (232-278)||(3512218-3512264)
chr8 (232-278)||(7420232-7420278)
chr8 (232-278)||(9496343-9496389)
chr8 (232-278)||(11019522-11019568)
chr8 (243-277)||(13154959-13154993)
chr8 (230-288)||(18549515-18549573)
chr8 (232-278)||(25600232-25600278)
chr8 (232-278)||(32725909-32725955)
chr8 (232-278)||(34963616-34963662)
chr8 (232-278)||(35097330-35097376)
chr8 (232-278)||(35346631-35346677)
chr8 (232-278)||(35346950-35346996)
chr8 (320-353)||(7272442-7272475)
chr8 (320-349)||(9175260-9175289)
chr8 (232-281)||(10755477-10755526)
chr8 (232-281)||(10776150-10776199)
chr8 (233-278)||(11976688-11976733)
chr8 (231-288)||(13779150-13779207)
chr8 (320-349)||(13779424-13779453)
chr8 (320-353)||(16010675-16010708)
chr8 (321-353)||(2356193-2356225)
chr8 (320-352)||(2811727-2811759)
chr8 (232-288)||(9175014-9175070)
chr8 (232-276)||(9908920-9908964)
chr8 (232-288)||(13154888-13154944)
chr8 (232-288)||(13155193-13155249)
chr8 (232-288)||(14488718-14488774)
chr8 (232-288)||(17073809-17073865)
chr8 (232-288)||(17574405-17574461)
chr8 (232-288)||(21125963-21126019)
chr8 (317-345)||(28258194-28258222)
chr8 (232-288)||(29158356-29158412)
chr8 (232-272)||(30337175-30337215)
chr8 (232-280)||(44997933-44997981)
[»] chr1 (61 HSPs)
chr1 (232-288)||(12322912-12322968)
chr1 (230-281)||(17130032-17130083)
chr1 (230-288)||(4789308-4789366)
chr1 (232-278)||(10887235-10887281)
chr1 (232-278)||(12322606-12322652)
chr1 (230-288)||(26207278-26207336)
chr1 (229-278)||(46183683-46183732)
chr1 (232-281)||(49073693-49073742)
chr1 (232-288)||(3247200-3247256)
chr1 (232-288)||(4323830-4323886)
chr1 (232-288)||(8140436-8140492)
chr1 (232-288)||(10631166-10631222)
chr1 (232-288)||(12360910-12360966)
chr1 (232-288)||(19720714-19720770)
chr1 (232-288)||(22674205-22674261)
chr1 (232-288)||(27521578-27521634)
chr1 (232-288)||(33000307-33000363)
chr1 (233-277)||(39025112-39025156)
chr1 (232-288)||(39747777-39747833)
chr1 (232-288)||(42482981-42483037)
chr1 (232-280)||(45638844-45638892)
chr1 (232-288)||(50428875-50428931)
chr1 (233-288)||(4617091-4617146)
chr1 (233-288)||(8364619-8364674)
chr1 (225-288)||(33234854-33234917)
chr1 (232-278)||(10887550-10887596)
chr1 (232-278)||(15526314-15526360)
chr1 (230-272)||(22953256-22953298)
chr1 (232-278)||(24654119-24654165)
chr1 (232-278)||(24977780-24977826)
chr1 (232-278)||(30322931-30322977)
chr1 (232-278)||(32420100-32420146)
chr1 (232-278)||(33000621-33000667)
chr1 (320-350)||(34002657-34002687)
chr1 (232-278)||(35056532-35056578)
chr1 (232-278)||(40718112-40718158)
chr1 (232-278)||(45380274-45380320)
chr1 (243-277)||(51986469-51986503)
chr1 (320-353)||(7350621-7350654)
chr1 (232-277)||(8364869-8364914)
chr1 (320-353)||(18927859-18927892)
chr1 (320-353)||(26699372-26699405)
chr1 (320-353)||(28507197-28507230)
chr1 (233-278)||(32906192-32906237)
chr1 (232-273)||(36912855-36912896)
chr1 (233-278)||(38150851-38150896)
chr1 (232-277)||(49074006-49074051)
chr1 (232-288)||(4565278-4565334)
chr1 (232-288)||(6567438-6567494)
chr1 (232-288)||(7818784-7818840)
chr1 (232-288)||(11822307-11822363)
chr1 (232-288)||(14007491-14007547)
chr1 (321-349)||(15211745-15211773)
chr1 (321-349)||(17129973-17130001)
chr1 (321-353)||(20948966-20948998)
chr1 (232-288)||(26324889-26324945)
chr1 (232-288)||(26442841-26442897)
chr1 (321-349)||(33067371-33067399)
chr1 (232-280)||(33067680-33067728)
chr1 (232-288)||(48609536-48609592)
chr1 (232-288)||(52254421-52254477)
[»] scaffold0160 (1 HSPs)
scaffold0160 (232-288)||(27306-27362)
[»] scaffold0001 (1 HSPs)
scaffold0001 (232-288)||(148224-148280)
[»] scaffold0060 (2 HSPs)
scaffold0060 (232-278)||(8332-8378)
scaffold0060 (232-278)||(8594-8640)
[»] scaffold0007 (2 HSPs)
scaffold0007 (232-278)||(2503-2549)
scaffold0007 (232-278)||(2835-2881)
[»] scaffold0005 (2 HSPs)
scaffold0005 (232-278)||(47927-47973)
scaffold0005 (320-349)||(222893-222922)
[»] scaffold0176 (1 HSPs)
scaffold0176 (320-349)||(21772-21801)
[»] scaffold0056 (2 HSPs)
scaffold0056 (233-278)||(50030-50075)
scaffold0056 (233-278)||(55131-55176)
[»] scaffold0535 (1 HSPs)
scaffold0535 (228-288)||(8730-8790)
[»] scaffold0024 (1 HSPs)
scaffold0024 (232-288)||(75361-75417)
[»] scaffold0011 (1 HSPs)
scaffold0011 (232-288)||(189620-189676)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 17 - 288
Target Start/End: Complemental strand, 5104208 - 5103943
Alignment:
Q  17 agcttcatatatatttacaatttccaagtggaaaatcatgtttttctaagttaaatacttaaattaatgaaaattctatccacattttgttagtggcata 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||| |||||||||||||||||    
T  5104208 agcttcatatatatttacaatttccaagtggaaaatcatgtttttctaagttaaat--------tgatgaaaattctatccatattttgttagtggcata 5104117  T
Q  117 ctctgcgggcaaggtgacatctgccatttgttatgtagaacttatagaagatgggaaagtgattcttgattgtctgcgttttattc--tgagtggaattt 214  Q
    ||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  5104116 ctctgcgggtaaggtgacatctgtcgtttgttgtgtagaacttatagaagatgggaaagtgattcttgattgtctgcgttttattctatgagtggaattt 5104017  T
Q  215 atgagattgattaatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||| ||||||||| |||||||| | ||||||||||| || ||||| ||||| | |||||||    
T  5104016 atgagattgattaatggctaaaatatggttttggttcctgcaaatatgtctcattttggttttagtttctgtaa 5103943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 38452394 - 38452338
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  38452394 ctaaaatatggttttggtccctgcaaatatgtctcgttttgattttaatctctgtaa 38452338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 45501 - 45449
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctg 285  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  45501 taaaatatggttttggtccctgcaaatatgtttcgttttggttttaatctctg 45449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4736540 - 4736484
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| || ||||||    
T  4736540 ctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtccctgtaa 4736484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 12145184 - 12145136
Alignment:
Q  229 tgactaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  12145184 tgactaaaatatggttttggtccctgcaaatatgtctcgttttgatttt 12145136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 20690735 - 20690791
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  20690735 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 20690791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 32108810 - 32108866
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||||||||||||  |||||||| ||||||    
T  32108810 ctaaaatatggttttggtccctgcaaatatgtttcgttttagttttaatccctgtaa 32108866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 6912857 - 6912799
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  6912857 gactaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 6912799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 35609299 - 35609361
Alignment:
Q  226 taatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||| ||||||||| |||||||||||||||||||||  |||||||| ||||| || ||||||    
T  35609299 taatggctaaaatatggttttggtccatgcaaatatgcatcgttttggttttagtccctgtaa 35609361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 37271704 - 37271658
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  37271704 ctaaaatatggttttggtccctgcaaatatgtctcgttttgatttta 37271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 42553639 - 42553700
Alignment:
Q  227 aatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||| |||||||||  ||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  42553639 aatggctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 42553700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 45140 - 45196
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  45140 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 45196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 1104860 - 1104916
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||  |||||||||||||| || ||||||    
T  1104860 ctaaaatatggttttggtccctgcaaatatgcctcgttttgattttagtccctgtaa 1104916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 1381249 - 1381305
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  1381249 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 1381305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4203768 - 4203712
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  4203768 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 4203712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 18046040 - 18046096
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  18046040 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 18046096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 31037739 - 31037683
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| |||||||||    
T  31037739 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttattctctgtaa 31037683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 35928456 - 35928400
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  35928456 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 35928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 36973708 - 36973652
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| || |||||||| |||||||||||||| || ||||||    
T  36973708 ctaaaatatggttttggtccctggaaatatgtctcgttttgattttagtccctgtaa 36973652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 40168006 - 40167950
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||||||||||||||| |||||||| ||||| || ||||||    
T  40168006 ctaaaatattgttttagtccatgcaaatatgtctcgttttggttttagtccctgtaa 40167950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 30888162 - 30888217
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgta 287  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || |||||    
T  30888162 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgta 30888217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 35609636 - 35609589
Alignment:
Q  231 actaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35609636 actaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35609589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 5614168 - 5614214
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  5614168 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 5614214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 5917128 - 5917174
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  5917128 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 5917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 18258525 - 18258479
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  18258525 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 18258479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 19565469 - 19565515
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  19565469 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 19565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 19685019 - 19685065
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  19685019 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 19685065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 20986087 - 20986041
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  20986087 ctaaaatatggttttggtccctgcaaatatgcctcgttttgatttta 20986041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 31602513 - 31602467
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| || ||| ||||||||| ||||||||||||||    
T  31602513 ctaaaatatagttttagttcatacaaatatgtctcgttttgatttta 31602467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 35877050 - 35877004
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35877050 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35877004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 38496780 - 38496734
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| |||||||||||||||||||| |||||    
T  38496780 ctaaaatatggttttagtccctgcaaatatgtttcgttttggtttta 38496734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 45421 - 45388
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||| ||||||||||||||||||    
T  45421 ctgcaaatatgtctcattttggttttggtctctg 45388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 10409324 - 10409271
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctg 285  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| ||||||    
T  10409324 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtctctg 10409271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 12145161 - 12145128
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||| ||||||||||||    
T  12145161 ctgcaaatatgtctcgttttgattttggtctctg 12145128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 20690755 - 20690788
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  20690755 ctgcaaatatgtctcgttttggttttagtctctg 20690788  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 25561997 - 25561944
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctg 285  Q
    ||||||||| ||||| |||| ||||||||||  |||||||| ||||||||||||    
T  25561997 ctaaaatatggttttagtccctgcaaatatgcctcgttttggttttaatctctg 25561944  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 28213455 - 28213488
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  28213455 ctgcaaatatgcctcgttttggttttggtctctg 28213488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 40038496 - 40038545
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| |||||| ||| ||||||||||  |||||||||||||||||    
T  40038496 ctaaaatatggttttgatccctgcaaatatgcctcgttttgattttaatc 40038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 42553664 - 42553697
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  42553664 ctgcaaatatgtctcgttttggttttagtctctg 42553697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 5904010 - 5904066
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||  |||||||||||||| || ||||||    
T  5904010 ctaaaatatggttttgctccttgcaaatatgcctcgttttgattttagtccctgtaa 5904066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 10744052 - 10743996
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  10744052 ctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtccctgtaa 10743996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 17070537 - 17070592
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| ||| |||||||||| || ||||||    
T  17070537 ctaaaatatggttttggtccctgcaaatatgtctcg-tttgattttagtccctgtaa 17070592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 21050911 - 21050855
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  21050911 ctaaaatatggttttagtccctgcaaatatgcatcgttttgattttagtccctgtaa 21050855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 26133411 - 26133355
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  26133411 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 26133355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 36577724 - 36577780
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  36577724 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 36577780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 42994070 - 42994118
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaat 280  Q
    ||||||||| ||||| |||| ||||||||||  ||||||||||||||||    
T  42994070 ctaaaatatggttttagtccctgcaaatatgactcgttttgattttaat 42994118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 863649 - 863594
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||    
T  863649 taaaatatggttttggtccctgcaaatatgtttcgttttgattttagtccctgtaa 863594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 19297949 - 19297891
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||||| || |||||||| |||||||| ||||| |||||||||    
T  19297949 gactaaaatatagttttggtccttgtaaatatgtctcgttttgtttttagtctctgtaa 19297891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 20644507 - 20644563
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||| || ||||||    
T  20644507 ctaaaatatagttttggtccctgcaaatatgtctcattttgattttagtccctgtaa 20644563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 28418898 - 28418842
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||| || ||||||    
T  28418898 ctaaaatatggttttggtccctgcaaatatgttttgttttgattttagtccctgtaa 28418842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 29490741 - 29490685
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  29490741 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 29490685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 45313861 - 45313805
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||| || ||||||    
T  45313861 ctaaaatatggttttggtccctgcaaatatgcttcgttttgattttagtccctgtaa 45313805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 2486902 - 2486851
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| ||||||||    
T  2486902 gactaaaatatggttttggtccctgcaaatatgcttcgttttggttttaatc 2486851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 46622127 - 46622081
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  46622127 ctaaaatatggttttggtccttgcaaatatgtttcgttttggtttta 46622081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 45006248 - 45006191
Alignment:
Q  231 actaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||| |||| ||||||||||  |||||||| |||||||| ||||||    
T  45006248 actaaaatatagttttagtccctgcaaatatgcctcgttttggttttaatccctgtaa 45006191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 50261939 - 50261878
Alignment:
Q  227 aatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||| ||||||||| ||||| |||| |||||||||||||| ||||| ||||| |||||||||    
T  50261939 aatggctaaaatatcgttttagtccctgcaaatatgtttcattttggttttagtctctgtaa 50261878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 863283 - 863339
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||||||||||||||| |||||||  ||||| |||||||||    
T  863283 ctaaaatatgattttggtccatgcaaatatgtctcgttttagttttagtctctgtaa 863339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 4034719 - 4034775
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  4034719 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 4034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 7588320 - 7588376
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||| ||||||||||  | |||||| ||||| |||||||||    
T  7588320 ctaaaatatagttttggtccctgcaaatatgccttgttttggttttagtctctgtaa 7588376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 12741269 - 12741213
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  12741269 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 12741213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 26090076 - 26090020
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  26090076 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 26090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 29955296 - 29955356
Alignment:
Q  228 atgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  29955296 atgactaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtccctgtaa 29955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 30004450 - 30004510
Alignment:
Q  228 atgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  30004450 atgactaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtccctgtaa 30004510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 47336579 - 47336523
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  47336579 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 47336523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 50009282 - 50009226
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||| ||| |||||||||| ||||||||||  ||||||||||||||||| ||||||    
T  50009282 ctaaactatggttttggtccttgcaaatatgcctcgttttgattttaatccctgtaa 50009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 51550444 - 51550388
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  51550444 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 51550388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 54608861 - 54608805
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  54608861 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 54608805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 4322186 - 4322131
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||||||| ||||||||||| | |||||| ||||| || ||||||    
T  4322186 taaaatatagttttggtccctgcaaatatgtcttgttttggttttagtccctgtaa 4322131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 32119222 - 32119261
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgtttt 271  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  32119222 ctaaaatatagttttggtccctgcaaatatgtctcgtttt 32119261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 35569133 - 35569078
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  35569133 taaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 35569078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 47114801 - 47114762
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgtttt 271  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  47114801 ctaaaatatagttttggtccttgcaaatatatttcgtttt 47114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 474046 - 474092
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  474046 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 474092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 474406 - 474360
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  474406 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 474360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 12740909 - 12740955
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  12740909 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 12740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 19656543 - 19656589
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  19656543 ctaaaatatggttttagtccatgcaaatatgcctcgttttgatttta 19656589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 21159455 - 21159501
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  21159455 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 21159501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 22155931 - 22155977
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  22155931 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 22155977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 25610128 - 25610082
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  25610128 ctaaaatatggttttggtccctgcaaatatgcctcgttttgatttta 25610082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 30552476 - 30552430
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||||||||||||||| |||||||| |||||    
T  30552476 ctaaaatatcgttttagtccatgcaaatatgtctcgttttggtttta 30552430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 38232243 - 38232289
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  38232243 ctaaaatatgattttggtccctgcaaatatgtctcgttttgatttta 38232289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 40169652 - 40169606
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  40169652 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 40169606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 43441272 - 43441318
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  43441272 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 43441318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 7957145 - 7957116
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  7957145 ctgcaaatatgtctcgttttggttttggtc 7957116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 8555305 - 8555260
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||||||||||||||  |||||||| |||||    
T  8555305 taaaatatggttttggtccatgcaaatatgcatcgttttggtttta 8555260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 20644587 - 20644616
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  20644587 ctgcaaatatgtctcgttttggttttggtc 20644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 25610049 - 25610020
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  25610049 ctgcaaatatgtctcgttttggttttggtc 25610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 25710515 - 25710568
Alignment:
Q  235 aaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  25710515 aaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 25710568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 29490721 - 29490688
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  29490721 ctgcaaatatgtctcgttttggttttagtctctg 29490688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 353
Target Start/End: Original strand, 35177341 - 35177370
Alignment:
Q  324 aaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||||||    
T  35177341 aaatatgtctcgttttggttttggtctctg 35177370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 39132825 - 39132796
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  39132825 ctgcaaatatgtctcgttttggttttggtc 39132796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 39288575 - 39288628
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctg 285  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| ||||||    
T  39288575 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 39288628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 39288595 - 39288628
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  39288595 ctgcaaatatgtctcgttttggttttagtctctg 39288628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 40545757 - 40545724
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  40545757 ctgcaaatatgcctcgttttggttttggtctctg 40545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 45005889 - 45005934
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||| ||| ||||||||||| ||||||||||||||    
T  45005889 taaaatatggttttgatccctgcaaatatgtctcgttttgatttta 45005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 45161135 - 45161168
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  45161135 ctgcaaatatgtctcgttttggttttagtctctg 45161168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 47114732 - 47114699
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||| ||||||    
T  47114732 ctgcaaatatgtctcgttttggttttgatctctg 47114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 53113445 - 53113490
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||    
T  53113445 ctaaaatatggttttggtccctgcaaatatgtctcgttttgttttt 53113490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 4814542 - 4814598
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| ||| |||||    
T  4814542 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttattctgtgtaa 4814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 22008528 - 22008584
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  22008528 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 22008584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 22016046 - 22016102
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  22016046 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 22016102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 29678026 - 29678082
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||  ||||||||||  |||||||| ||||| || ||||||    
T  29678026 ctaaaatatagttttggtctttgcaaatatgcctcgttttggttttagtccctgtaa 29678082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29686550 - 29686602
Alignment:
Q  236 aatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||| |||||||||||||||||||||| | |||||| ||||| || ||||||    
T  29686550 aatatggttttggtccatgcaaatatgtcttgttttggttttagtccctgtaa 29686602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 30034106 - 30034158
Alignment:
Q  229 tgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    |||||||||||| |||||||||| || |||||||  |||||||| ||||||||    
T  30034106 tgactaaaatatggttttggtccttgtaaatatgcctcgttttggttttaatc 30034158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 30034470 - 30034414
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  30034470 ctaaaatatggttttgctccttgcaaatatgtctcgttttggttttagtccctgtaa 30034414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 35177257 - 35177313
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| ||||||||||| |||||||| ||||| | |||||||    
T  35177257 ctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtttctgtaa 35177313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 39072211 - 39072155
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| || | ||||||||||  ||||||||||||||||| ||||||    
T  39072211 ctaaaatatggttttagttcctgcaaatatgcctcgttttgattttaatccctgtaa 39072155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 45313502 - 45313558
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| || ||||||| ||||||||||||||| | |||||||    
T  45313502 ctaaaatatgattttggtccttgtaaatatgattcgttttgattttagtatctgtaa 45313558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 46724900 - 46724844
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||  ||||||||||||| |||||||||||| || ||||||    
T  46724900 ctaaaatatggttttgatctctgcaaatatgttttgttttgattttagtccctgtaa 46724844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 47005156 - 47005212
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||  ||||| || ||||||    
T  47005156 ctaaaatatggttttggtccctgcaaatatgtctcgttttagttttagtccctgtaa 47005212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 52342197 - 52342249
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctct 284  Q
    ||||||||| |||||||||| ||||||||||  || ||||| |||||||||||    
T  52342197 ctaaaatatggttttggtccctgcaaatatgcctccttttggttttaatctct 52342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 53701661 - 53701605
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  53701661 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 53701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 6847119 - 6847061
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| ||||| |||||||||    
T  6847119 gactaaaatatggttttggtccctgcaaatatgcttcgttttggttttagtctctgtaa 6847061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 34878123 - 34878067
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  34878123 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttaatctctgtaa 34878067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 35469882 - 35469938
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| |||||||||||||||||||| ||||| |||||||||    
T  35469882 ctaaaatatggttttgatccctgcaaatatgtttcgttttggttttagtctctgtaa 35469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 46304382 - 46304326
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||| || ||||||    
T  46304382 ctaaaatatagttttagtccctgcaaatatgtttcgttttggttttagtccctgtaa 46304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 31503780 - 31503725
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| ||||| |||| ||||||||||| |||||||||||||| |||||||||    
T  31503780 taaaatatggttttagtccctgcaaatatgtctcgttttgattttagtctctgtaa 31503725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 36684741 - 36684706
Alignment:
Q  318 ctctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||||||||||||    
T  36684741 ctctgcaaatatgtctcgttttggttttggtctctg 36684706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 39520727 - 39520672
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||| || ||||||    
T  39520727 taaaatatggttttggtccttgcaaatatgtctcgttttgattttagtccctgtaa 39520672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 1559345 - 1559399
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgt 286  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||||||| ||||    
T  1559345 ctaaaatatagttttagtccctgcaaatatgcctcgttttgattttaatccctgt 1559399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 19005600 - 19005646
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||    
T  19005600 ctaaaatatagttttggtccctgtaaatatgtctcgttttgatttta 19005646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 43058751 - 43058808
Alignment:
Q  231 actaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||| |||| ||||||||||| | |||||||||||| || ||||||    
T  43058751 actaaaatatagttttagtccctgcaaatatgtcttgttttgattttagtccctgtaa 43058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 1974011 - 1974067
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||    
T  1974011 ctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtccctgtaa 1974067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 25547488 - 25547432
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  25547488 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 25547432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 27458401 - 27458457
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  27458401 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 27458457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 31732103 - 31732159
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  ||||||||||||||||| ||||||    
T  31732103 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttaatccctgtaa 31732159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 35838335 - 35838279
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  35838335 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 35838279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 39520400 - 39520456
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||||| ||||||||| |||||||| ||||| || ||||||    
T  39520400 ctaaaatatggttttggtccatccaaatatgtctcgttttggttttagtccctgtaa 39520456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 1614561 - 1614607
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  1614561 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 1614607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 3807866 - 3807912
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||||||||||| | ||||||||||| |||||||| |||||    
T  3807866 ctaaaatatagttttggttcctgcaaatatgtctcgttttggtttta 3807912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 8144297 - 8144343
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  8144297 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 8144343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 9659357 - 9659403
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||| ||| ||||||||||| ||||||||||||||    
T  9659357 ctaaaatatggttttgctccctgcaaatatgtctcgttttgatttta 9659403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 14739002 - 14738956
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  14739002 ctaaaatatggttttagtccctgcaaatatgcttcgttttgatttta 14738956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 19783817 - 19783863
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||||    
T  19783817 ctaaaatatagttttagtccctgcaaatatgtctcgttttggtttta 19783863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 23399974 - 23399928
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  23399974 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 23399928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 25092162 - 25092208
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  25092162 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 25092208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 25988387 - 25988433
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  25988387 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 25988433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 28263071 - 28263013
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||| ||| ||||||||||| | |||||||||||| || ||||||    
T  28263071 gactaaaatatggttttgatccctgcaaatatgtattgttttgattttagtccctgtaa 28263013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 30223793 - 30223747
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||||||||||||||  |||||||| |||||    
T  30223793 ctaaaatatggttttggtccatgcaaatatgcctcgttttggtttta 30223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 30352902 - 30352856
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||||    
T  30352902 ctaaaatatagttttagtccctgcaaatatgcctcgttttgatttta 30352856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 354
Target Start/End: Complemental strand, 30709622 - 30709588
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctgc 354  Q
    |||||||||||||||||||||||||| ||||||||    
T  30709622 ctgcaaatatgtctcgttttggttttagtctctgc 30709588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 31732449 - 31732403
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  31732449 ctaaaatatggttttagtccatgcaaatatgcctcgttttgatttta 31732403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 35104080 - 35104126
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||| ||||||||| ||||||||||| |||||||| |||||    
T  35104080 ctaaaatataattttggtccctgcaaatatgtctcgttttggtttta 35104126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 35837926 - 35837972
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35837926 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35837972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 46759660 - 46759706
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  46759660 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 46759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 3808097 - 3808064
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  3808097 ctgcaaatatgtctcgttttggttttagtctctg 3808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 19005856 - 19005827
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  19005856 ctgcaaatatgtctcgttttggttttggtc 19005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 23676135 - 23676180
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  23676135 taaaatatggttttggtccctgcaaatatgtctcgttttggtttta 23676180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 38186369 - 38186414
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||  ||||||||||||||    
T  38186369 taaaatatggttttggtccctgcaaatatgcctcgttttgatttta 38186414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 38486711 - 38486678
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||| ||||||||||||    
T  38486711 ctgcaaatatgtctcgttttgattttggtctctg 38486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 1271517 - 1271485
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctct 352  Q
    |||||||||||||||||||| ||||||||||||    
T  1271517 ctgcaaatatgtctcgttttagttttggtctct 1271485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 6079811 - 6079867
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  6079811 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtccctgtaa 6079867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 12932781 - 12932725
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| ||||||||||  |||||||||||||| || ||||||    
T  12932781 ctaaaatatgtttttggtccctgcaaatatgcctcgttttgattttagtccctgtaa 12932725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 19561448 - 19561392
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  19561448 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 19561392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 20355498 - 20355526
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  20355498 tgcaaatatgtctcgttttggttttggtc 20355526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 26877698 - 26877734
Alignment:
Q  318 ctctgcaaatatgtctcgttttggttttggtctctgc 354  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  26877698 ctctgcaaatatgtctcgttttggttttagtccctgc 26877734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 346
Target Start/End: Complemental strand, 28529189 - 28529161
Alignment:
Q  318 ctctgcaaatatgtctcgttttggttttg 346  Q
    |||||||||||||||||||||||||||||    
T  28529189 ctctgcaaatatgtctcgttttggttttg 28529161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 35210513 - 35210457
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  35210513 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 35210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 35665958 - 35665986
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  35665958 tgcaaatatgtctcgttttggttttggtc 35665986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 38186738 - 38186706
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctct 352  Q
    |||||||||||||||||||||||||| ||||||    
T  38186738 ctgcaaatatgtctcgttttggttttagtctct 38186706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 39832908 - 39832964
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  39832908 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 39832964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 41053844 - 41053900
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||  || ||||||||||| || ||||||    
T  41053844 ctaaaatatggttttggtccctgcaaatatgcctcattttgattttagtccctgtaa 41053900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 44344787 - 44344731
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  44344787 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 44344731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 348
Target Start/End: Original strand, 44841437 - 44841465
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggt 348  Q
    |||||||||||||||||||||||||||||    
T  44841437 ctgcaaatatgtctcgttttggttttggt 44841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 45073639 - 45073583
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| ||||||||||  |||||||| ||||| || ||||||    
T  45073639 ctaaaatatagttttagtccctgcaaatatgcctcgttttggttttagtccctgtaa 45073583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 46759940 - 46759884
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  46759940 ctaaaatatgattttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 46759884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 46828946 - 46829002
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| | |||||| ||||| || ||||||    
T  46828946 ctaaaatatggttttggtccctgcaaatatgtcttgttttggttttagtccctgtaa 46829002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48854068 - 48854012
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||| ||| |||||||||||||||||||| ||||| || ||||||    
T  48854068 ctaaaatatgattttgatccctgcaaatatgtttcgttttggttttagtccctgtaa 48854012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 19320763 - 19320825
Alignment:
Q  226 taatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||||||||| ||||||||||| || ||||| |||||||| ||||||    
T  19320763 taatgactaaaatatggttttggtccctgcaaatatgtctcattttggttttaatccctgtaa 19320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 8169789 - 8169845
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||| || ||||||    
T  8169789 ctaaaatatgattttggtccatgcaaatatgttttgttttgattttactccctgtaa 8169845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 15722612 - 15722668
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||| || ||||||    
T  15722612 ctaaaatatggttttggtctatgcaaatatgtctcgttttgattttagtccctgtaa 15722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 31276338 - 31276282
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||||    
T  31276338 ctaaaataaagttttggtccctgcaaatatgtctcgttttgattttagtccctgtaa 31276282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 11925752 - 11925797
Alignment:
Q  243 ttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||    
T  11925752 ttttggtccctgcaaatatgtctcgttttgattttagtctctgtaa 11925797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 27765092 - 27765059
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||||||||||    
T  27765092 ctgcaaatatgtctcgttttggttttggtctctg 27765059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 10910962 - 10910906
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  10910962 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 10910906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 12757612 - 12757668
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  12757612 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtcactgtaa 12757668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 14656258 - 14656202
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  14656258 ctaaaatatggttttggtccttgcaaatatgtctcgttttggttttagtccctgtaa 14656202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 17765011 - 17765067
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| | |||||||    
T  17765011 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtttctgtaa 17765067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 19690395 - 19690451
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  19690395 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 19690451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 25121494 - 25121438
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| | |||||||||||||||||||| ||||| || ||||||    
T  25121494 ctaaaatatggttttggtgcctgcaaatatgtttcgttttggttttagtccctgtaa 25121438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 10091039 - 10091094
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||    
T  10091039 taaaatatggttttagtccctgcaaatatgtttcgttttggttttagtccctgtaa 10091094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 317814 - 317860
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||||    
T  317814 ctaaaatatagttttagtccctgcaaatatgtctcgttttggtttta 317860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 3276352 - 3276306
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  3276352 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 3276306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 3968647 - 3968693
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  3968647 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 3968693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 6412220 - 6412266
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  6412220 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 6412266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 6412577 - 6412531
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  6412577 ctaaaatatggttttggtccctgcaaatatgcctcgttttgatttta 6412531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 6564932 - 6564886
Alignment:
Q  242 gttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  6564932 gttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 6564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8170149 - 8170103
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  8170149 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 8170103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 13617529 - 13617587
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||||||| ||||||||||  |||||||| ||||| || ||||||    
T  13617529 gactaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctgtaa 13617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 354
Target Start/End: Complemental strand, 19129438 - 19129404
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctgc 354  Q
    |||||||||||||||||||||||||||||| ||||    
T  19129438 ctgcaaatatgtctcgttttggttttggtccctgc 19129404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 351
Target Start/End: Original strand, 19690477 - 19690507
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtctc 351  Q
    |||||||||||||||||||||||||||||||    
T  19690477 tgcaaatatgtctcgttttggttttggtctc 19690507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 21385253 - 21385299
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  21385253 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 21385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 22543716 - 22543670
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  22543716 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 22543670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 24901241 - 24901287
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  24901241 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 24901287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 494750 - 494701
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||||||    
T  494750 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttaatc 494701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 6564922 - 6564889
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  6564922 ctgcaaatatgtctcgttttggttttagtctctg 6564889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 13268191 - 13268220
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  13268191 ctgcaaatatgtctcgttttggttttggtc 13268220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 19275214 - 19275181
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  19275214 ctgcaaatatgtctcgttttggttttagtctctg 19275181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 20467354 - 20467399
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||||||| ||||||||||  |||||||| |||||    
T  20467354 taaaatatagttttggtccctgcaaatatgcctcgttttggtttta 20467399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 318095 - 318039
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||  ||| |||||||||||||||||||| ||||| || ||||||    
T  318095 ctaaaatatggttttaatccctgcaaatatgtttcgttttggttttagtccctgtaa 318039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 12298901 - 12298929
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  12298901 tgcaaatatgtctcgttttggttttggtc 12298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 14428950 - 14428902
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||| ||||| |||| |||||||||| ||||||||| |||||    
T  14428950 gactaaaatatggttttagtccttgcaaatatgcttcgttttggtttta 14428902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 18024373 - 18024317
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| | |||||| ||||| || ||||||    
T  18024373 ctaaaatatggttttggtccctgcaaatatgtcttgttttggttttagtccctgtaa 18024317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 21993789 - 21993845
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  21993789 ctaaaatatggttttgctccctgcaaatatgtctcgttttggttttagtccctgtaa 21993845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 23502538 - 23502482
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  23502538 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttactccctgtaa 23502482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 23770163 - 23770219
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  23770163 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 23770219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 25121205 - 25121237
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctct 352  Q
    |||||||||||||||||||||||||| ||||||    
T  25121205 ctgcaaatatgtctcgttttggttttagtctct 25121237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 25431852 - 25431796
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  25431852 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 25431796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 26375695 - 26375751
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||  ||| ||||||||||| |||||||| |||||||| ||||||    
T  26375695 ctaaaatatggttttaatccctgcaaatatgtctcgttttggttttaatccctgtaa 26375751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 30479420 - 30479364
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| ||||||||||||  |||||||| ||||| || ||||||    
T  30479420 ctaaaatatggttttggttcatgcaaatatgcctcgttttggttttagtccctgtaa 30479364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 30928683 - 30928739
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  30928683 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 30928739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 146694 - 146632
Alignment:
Q  226 taatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||| ||||| || ||||||    
T  146694 taatggctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtccctgtaa 146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 31644843 - 31644899
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  31644843 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 31644899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 37228735 - 37228791
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  37228735 ctaaaatatggttttggtccctgcaaatatgtatcgttttggttttagtctctgtaa 37228791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 44559407 - 44559351
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  44559407 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 44559351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 3832634 - 3832579
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  3832634 taaaatatggttttggtccctgcaaatatgtttcgttttggttttagtctatgtaa 3832579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 25300046 - 25300004
Alignment:
Q  224 attaatgactaaaatatagttttggtccatgcaaatatgtttc 266  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  25300046 attaatgactaaaatatggttttggtccctgcaaatatgtttc 25300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 36815833 - 36815787
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||||    
T  36815833 ctaaaatatggttttggtccatgcaaatatgtctcgttttggtttta 36815787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 11788135 - 11788168
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||||||||||    
T  11788135 ctgcaaatatgtctcgttttggttttggtctctg 11788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4424183 - 4424127
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  4424183 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 4424127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 5164413 - 5164381
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||||||||||    
T  5164413 tgcaaatatgtctcgttttggttttggtctctg 5164381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 10375067 - 10375011
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| |||||||| ||||||    
T  10375067 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttaatccctgtaa 10375011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 13215062 - 13215118
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  13215062 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 13215118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 20939323 - 20939267
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  20939323 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 20939267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 25705087 - 25705143
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  25705087 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 25705143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 29182170 - 29182226
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| |||||||||||||| ||||| ||||| |||||||||    
T  29182170 ctaaaatatgattttggtccttgcaaatatgtttcattttggttttagtctctgtaa 29182226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 41693676 - 41693732
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||    
T  41693676 ctaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtccctgtaa 41693732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 44559064 - 44559120
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  44559064 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 44559120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 26238816 - 26238871
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  26238816 taaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 26238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 34963797 - 34963852
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgta 287  Q
    ||||||||| |||||| ||| ||| ||||||||| |||||||||||| ||||||||    
T  34963797 ctaaaatatggttttgatccctgctaatatgttttgttttgattttagtctctgta 34963852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 3671005 - 3671051
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  3671005 ctaaaatatggttttagtccatgcaaatatgcctcgttttgatttta 3671051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 20131319 - 20131365
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  20131319 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 20131365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 26239158 - 26239112
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  26239158 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 26239112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 31225717 - 31225763
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||||    
T  31225717 ctaaaatatagttttagtccctgcaaatatgcctcgttttgatttta 31225763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 33576115 - 33576069
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  33576115 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 33576069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 36806892 - 36806838
Alignment:
Q  234 aaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  36806892 aaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 36806838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 41451839 - 41451885
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  41451839 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 41451885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 42695870 - 42695916
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  42695870 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 42695916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 1138064 - 1138093
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  1138064 ctgcaaatatgtctcgttttggttttggtc 1138093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 3832353 - 3832386
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||| ||||||||||||||||||    
T  3832353 ctgcaaatatgtctcattttggttttggtctctg 3832386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 13215343 - 13215314
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  13215343 ctgcaaatatgtctcgttttggttttggtc 13215314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 17912471 - 17912504
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  17912471 ctgcaaatatgtctcgttttggttttagtctctg 17912504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 29831816 - 29831865
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    |||||||||||||||| ||| ||||||||||| |||||||| ||| ||||    
T  29831816 ctaaaatatagttttgatccctgcaaatatgtctcgttttggtttcaatc 29831865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 31644863 - 31644896
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  31644863 ctgcaaatatgtctcgttttggttttagtctctg 31644896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 34964079 - 34964046
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  34964079 ctgcaaatatgcctcgttttggttttggtctctg 34964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 38639414 - 38639467
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctg 285  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| ||||||    
T  38639414 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctg 38639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 38639434 - 38639467
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  38639434 ctgcaaatatgtctcgttttggttttagtctctg 38639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 44559387 - 44559354
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  44559387 ctgcaaatatgtctcgttttggttttagtctctg 44559354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 146326 - 146374
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||| |||||||||| ||||||||||  |||||||| |||||    
T  146326 gactaaaatatggttttggtccctgcaaatatgcctcgttttggtttta 146374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 1497612 - 1497668
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  1497612 ctaaaatatggttttagtccttgcaaatatgcctcgttttgattttagtccctgtaa 1497668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 3837935 - 3837991
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| ||||||||||| |||||||  ||||| || ||||||    
T  3837935 ctaaaatatagttttagtccctgcaaatatgtctcgttttcgttttagtccctgtaa 3837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 10664986 - 10665042
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||| ||| || ||||||    
T  10664986 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatattagtccctgtaa 10665042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 11713487 - 11713543
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  11713487 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 11713543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 11788414 - 11788358
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  11788414 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 11788358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 17302141 - 17302085
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| | ||||||||||| |||||||| ||||| || ||||||    
T  17302141 ctaaaatatggttttggttcctgcaaatatgtctcgttttggttttagtccctgtaa 17302085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 36622252 - 36622308
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  36622252 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 36622308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 38731831 - 38731887
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| ||||||||||  |||||||| ||||| || ||||||    
T  38731831 ctaaaatatagttttagtccctgcaaatatgcctcgttttggttttagtccctgtaa 38731887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 43672316 - 43672260
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| ||||||||||||| |||||| ||||| || ||||||    
T  43672316 ctaaaatatgattttggtccctgcaaatatgttttgttttggttttagtccctgtaa 43672260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 45442318 - 45442366
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaat 280  Q
    ||||||||| ||||| |||  ||||||||||| ||||||||||||||||    
T  45442318 ctaaaatatggttttagtctctgcaaatatgtctcgttttgattttaat 45442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 28449212 - 28449163
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  28449212 ctaaaatatggttttggtccttgcaaatatgtctcgttttgattttaatc 28449163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 11693119 - 11693063
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||| || ||||||    
T  11693119 ctaaaatatggttttggtccctgcaaatatgtctcgttttgattttagtccctgtaa 11693063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 19321857 - 19321801
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| || ||||||    
T  19321857 ctaaaatatggttttggtccctgcaaatatgtttcgttttggttttagtccctgtaa 19321801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 54208822 - 54208767
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  54208822 taaaatatggttttggtccctgcaaatatgtctcgttttggttttagtctctgtaa 54208767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 43368465 - 43368523
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||    
T  43368465 gactaaaatatggttttagtccctgcaaatatgtttcgttttggttttagtccctgtaa 43368523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 19903656 - 19903607
Alignment:
Q  229 tgactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  19903656 tgactaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 19903607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 51738409 - 51738364
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||    
T  51738409 ctaaaatatggttttggtccatgcaaatatgcctcgttttgatttt 51738364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 7639898 - 7639954
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| | ||||||||| | |||||| |||||||||||||||    
T  7639898 ctaaaatatggttttggtccctacaaatatgtcttgttttggttttaatctctgtaa 7639954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 13073761 - 13073817
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  13073761 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 13073817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 13631230 - 13631286
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  13631230 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 13631286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 19903263 - 19903319
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||| ||| ||||||||||| || ||||||||||| || ||||||    
T  19903263 ctaaaatatagttttgatccctgcaaatatgtctcattttgattttagtccctgtaa 19903319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 22099910 - 22099854
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| |||||||||    
T  22099910 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctgtaa 22099854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 22584289 - 22584345
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| |||||||||    
T  22584289 ctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtctctgtaa 22584345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 25423926 - 25423982
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  25423926 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 25423982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 25424310 - 25424254
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  25424310 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 25424254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 35464020 - 35464076
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  35464020 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 35464076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 36702002 - 36702058
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  36702002 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 36702058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 52441765 - 52441821
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  52441765 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 52441821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 35420704 - 35420645
Alignment:
Q  229 tgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||| |||||||||| ||||||||||| ||| |||| ||||| || ||||||    
T  35420704 tgactaaaatatggttttggtccttgcaaatatgtctcgatttggttttagtccctgtaa 35420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 8904888 - 8904934
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||||||||||||| ||||||||||  |||||||| |||||    
T  8904888 ctaaaatatagttttggtccctgcaaatatgcctcgttttggtttta 8904934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 13530381 - 13530427
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||| ||| ||||||||||| ||||||||||||||    
T  13530381 ctaaaatatggttttgctccctgcaaatatgtctcgttttgatttta 13530427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 13764805 - 13764759
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| || ||||||||||||||||| |||||    
T  13764805 ctaaaatatggttttggtccctgtaaatatgtttcgttttggtttta 13764759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 14791804 - 14791758
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  14791804 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 14791758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 15555636 - 15555590
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||||||| |||| ||||||||||| |||||||| |||||    
T  15555636 ctaaaatatagttttagtccctgcaaatatgtctcgttttggtttta 15555590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 29420535 - 29420489
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  29420535 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 29420489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 30564828 - 30564890
Alignment:
Q  225 ttaatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgta 287  Q
    |||| ||||||||||| ||||| |||| ||||||||||||| |||||| ||||| || |||||    
T  30564828 ttaaagactaaaatatggttttagtccctgcaaatatgttttgttttggttttagtccctgta 30564890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 42824089 - 42824043
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| | ||||||||||||    
T  42824089 ctaaaatatggttttggtccctgcaaatatgtcttgttttgatttta 42824043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 43231090 - 43231136
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  43231090 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 43231136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 47023103 - 47023057
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||| ||| |||||||||||||||||||| |||||    
T  47023103 ctaaaatatggttttgatccctgcaaatatgtttcgttttggtttta 47023057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 52543424 - 52543470
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  52543424 ctaaaatatggttttggtccttgcaaatatgtctcgttttggtttta 52543470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 53915685 - 53915731
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  53915685 ctaaaatatggttttggtccctgcaaatatgcctcgttttgatttta 53915731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 53916045 - 53915999
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  53916045 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 53915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 2322350 - 2322317
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  2322350 ctgcaaatatgtctcgttttggttttcgtctctg 2322317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 12152411 - 12152378
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||| |||||||||||||||||||||    
T  12152411 ctgcaaatatgtttcgttttggttttggtctctg 12152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 12152471 - 12152442
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  12152471 ctgcaaatatgtctcgttttggttttggtc 12152442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 12152491 - 12152446
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||    
T  12152491 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttt 12152446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 14594485 - 14594456
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  14594485 ctgcaaatatgtctcgttttggttttggtc 14594456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 20144501 - 20144530
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  20144501 ctgcaaatatgtctcgttttggttttggtc 20144530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 22099890 - 22099857
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  22099890 ctgcaaatatgtctcgttttggttttagtctctg 22099857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 29380670 - 29380715
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||||||||| |||| ||||||||||| |||||||| ||||    
T  29380670 ctaaaatatagttttagtccctgcaaatatgtctcgttttggtttt 29380715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 29380690 - 29380719
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  29380690 ctgcaaatatgtctcgttttggttttggtc 29380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 31560698 - 31560637
Alignment:
Q  227 aatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||| ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||    
T  31560698 aatggctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctgtaa 31560637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 31811914 - 31811983
Alignment:
Q  219 gattgattaatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| | | ||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  31811914 gattgatttaaggctaaaatatggttttgatccctgcaaatatgtatcgttttggttttagtccctgtaa 31811983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 47022743 - 47022788
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  47022743 taaaatatggttttggtccttgcaaatatgtctcgttttggtttta 47022788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 53307836 - 53307869
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  53307836 ctgcaaatatgtctcgttttggttttcgtctctg 53307869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 54208803 - 54208770
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  54208803 ctgcaaatatgtctcgttttggttttagtctctg 54208770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 54903394 - 54903365
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  54903394 ctgcaaatatgtctcgttttggttttggtc 54903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 5827657 - 5827713
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||    
T  5827657 ctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctgtaa 5827713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 8760606 - 8760662
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||  ||| ||||||||||| |||||||| ||||| || ||||||    
T  8760606 ctaaaatatagttttactccctgcaaatatgtctcgttttggttttagtccctgtaa 8760662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 13064161 - 13064217
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  13064161 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtccctgtaa 13064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 13479609 - 13479553
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  13479609 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 13479553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 13764615 - 13764655
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttg 272  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  13764615 ctaaaatatggttttggtccctgcaaatatgtctcgttttg 13764655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 14488185 - 14488129
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||    
T  14488185 ctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctgtaa 14488129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 18205523 - 18205475
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||||| ||||| |||| ||||||||||| |||||||| |||||    
T  18205523 gactaaaatatggttttagtccctgcaaatatgtctcgttttggtttta 18205475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 20144729 - 20144673
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| ||||||||||||  |||||||| |||||| | ||||||    
T  20144729 ctaaaatatggttttggttcatgcaaatatgcctcgttttggttttaacccctgtaa 20144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 22584310 - 22584342
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||| |||||||    
T  22584310 tgcaaatatgtctcgttttggttttagtctctg 22584342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 23245593 - 23245537
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  23245593 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctgtaa 23245537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 26313990 - 26314046
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| |||||||||||| ||||||| ||||| || ||||||    
T  26313990 ctaaaatatggttttgatccctgcaaatatgttccgttttggttttagtccctgtaa 26314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 27008080 - 27008132
Alignment:
Q  226 taatgactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||| ||||||||||||||| |||| ||||||||||  |||||||| |||||    
T  27008080 taatggctaaaatatagttttagtccctgcaaatatgcctcgttttggtttta 27008132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 28809013 - 28809069
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  28809013 ctaaaatatggttttagtccttgcaaatatgtatcgttttggttttagtccctgtaa 28809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 31812211 - 31812155
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| | ||||||||||| |||||||| ||||| || ||||||    
T  31812211 ctaaaatatggttttggttcctgcaaatatgtctcgttttggttttagtccctgtaa 31812155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 37557193 - 37557137
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||   |||||||||||||| || ||||||    
T  37557193 ctaaaatatggttttggtccctgcaaatatacctcgttttgattttagtccctgtaa 37557137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 42848029 - 42848085
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||| | ||||||||||| |||||||| ||||| || ||||||    
T  42848029 ctaaaatatggttttggttcctgcaaatatgtctcgttttggttttagtccctgtaa 42848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 44925487 - 44925543
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| ||||| |||| ||||    
T  44925487 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtctcagtaa 44925543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 50714569 - 50714517
Alignment:
Q  226 taatgactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||| ||||||||| ||||| |||| ||||||||||| |||||||| |||||    
T  50714569 taatggctaaaatatggttttagtccctgcaaatatgtctcgttttggtttta 50714517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 52442090 - 52442034
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  52442090 ctaaaatatggttttagtccttgcaaatatgtctcgttttggttttagtccctgtaa 52442034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 53308066 - 53308010
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| |||||||||||  ||||||| ||||| || ||||||    
T  53308066 ctaaaatatggttttggtccctgcaaatatgtcccgttttggttttagtccctgtaa 53308010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 36044790 - 36044734
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||| ||| |||||||| |||||||||||||||    
T  36044790 ctaaaatatggttttggtccctgcaaatgtgtctcgttttggttttaatctctgtaa 36044734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 42132866 - 42132915
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  42132866 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttaatc 42132915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4621352 - 4621296
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||| ||||||||||  |||||||| ||||| || ||||||    
T  4621352 ctaaaatatagttttggtccctgcaaatatgcctcgttttggttttagtccctgtaa 4621296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 7186002 - 7185946
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  7186002 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 7185946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 7272422 - 7272478
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| |||||||||    
T  7272422 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtctctgtaa 7272478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 8298589 - 8298645
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  8298589 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 8298645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 8298973 - 8298917
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  8298973 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 8298917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 9832217 - 9832273
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||| ||| |||||||||| ||||||||||||| |||||| |||||||| ||||||    
T  9832217 ctaaattatggttttggtccttgcaaatatgttttgttttggttttaatccctgtaa 9832273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 10337121 - 10337177
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  10337121 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 10337177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 14489071 - 14489015
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  14489071 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 14489015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 22650466 - 22650522
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  22650466 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 22650522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 25600595 - 25600539
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||||||| ||||||||||| | |||||| ||||| || ||||||    
T  25600595 ctaaaatatagttttggtccctgcaaatatgtcttgttttggttttagtccctgtaa 25600539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 27117755 - 27117811
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||||||||| || ||||||    
T  27117755 ctaaaatatggttttgctccctgcaaatatgtctcgttttgattttagtccctgtaa 27117811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 30969400 - 30969456
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| | |||||||||||||||||| ||||| || ||||||    
T  30969400 ctaaaatatggttttggtccttacaaatatgtttcgttttggttttagtccctgtaa 30969456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 42133152 - 42133096
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  42133152 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 42133096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 1407999 - 1408046
Alignment:
Q  224 attaatgactaaaatatagttttggtccatgcaaatatgtttcgtttt 271  Q
    ||||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  1407999 attaatggctaaaatatggttttagtccatgcaaatatgtctcgtttt 1408046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 13232201 - 13232256
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  13232201 taaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 13232256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 21125721 - 21125776
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgta 287  Q
    ||||||||||||||| |||| ||||||||||  |||||||| |||||||| |||||    
T  21125721 ctaaaatatagttttagtccctgcaaatatgcctcgttttggttttaatccctgta 21125776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 1162911 - 1162957
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  1162911 ctaaaatatggttttagtccctgcaaatatgcttcgttttgatttta 1162957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 1778566 - 1778612
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  1778566 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 1778612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 1778917 - 1778871
Alignment:
Q  242 gttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||||    
T  1778917 gttttggtccctgcaaatatgtctcgttttggttttaatccctgtaa 1778871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 3512264 - 3512218
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  3512264 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 3512218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 7420232 - 7420278
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  7420232 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 7420278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 9496343 - 9496389
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  9496343 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 9496389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 11019522 - 11019568
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  11019522 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 11019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 13154959 - 13154993
Alignment:
Q  243 ttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||||||||||||||||||    
T  13154959 ttttggtccctgcaaatatgtttcgttttgatttt 13154993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 18549573 - 18549515
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  18549573 gactaaaatatggttttcgtccctgcaaatatgtctcgttttggttttagtccctgtaa 18549515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 25600232 - 25600278
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  25600232 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 25600278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 32725909 - 32725955
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  32725909 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 32725955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 34963662 - 34963616
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  34963662 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 34963616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 35097330 - 35097376
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35097330 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35097376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 35346631 - 35346677
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35346631 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35346677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 35346996 - 35346950
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35346996 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35346950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 7272442 - 7272475
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||||||||||||||| |||||||    
T  7272442 ctgcaaatatgtctcgttttggttttagtctctg 7272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 9175289 - 9175260
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  9175289 ctgcaaatatgtctcgttttggttttggtc 9175260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 10755526 - 10755477
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||||||    
T  10755526 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttaatc 10755477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 10776150 - 10776199
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||||||    
T  10776150 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttaatc 10776199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 11976733 - 11976688
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  11976733 taaaatatggttttggtccctgcaaatatgtctcgttttggtttta 11976688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 13779150 - 13779207
Alignment:
Q  231 actaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  13779150 actaaaatatggttttgatccctgcaaatatgtctcgttttggttttattccctgtaa 13779207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 13779453 - 13779424
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  13779453 ctgcaaatatgtctcgttttggttttggtc 13779424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 16010675 - 16010708
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||| ||||||||||||    
T  16010675 ctgcaaatatgtctcgttttgattttggtctctg 16010708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 2356225 - 2356193
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||| |||||||    
T  2356225 tgcaaatatgtctcgttttggttttagtctctg 2356193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 2811759 - 2811727
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctct 352  Q
    |||||||||||||||||||||||||| ||||||    
T  2811759 ctgcaaatatgtctcgttttggttttagtctct 2811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 9175014 - 9175070
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  ||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  9175014 ctaaaatatgattttggtccttgcaaatatgtctcgttttggttttagtccctgtaa 9175070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 9908920 - 9908964
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattt 276  Q
    |||||||||||||||  ||| ||||||||||| ||||||||||||    
T  9908920 ctaaaatatagttttaatccctgcaaatatgtctcgttttgattt 9908964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 13154888 - 13154944
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||||||||| ||| ||||||||||  |||||||| ||||| || ||||||    
T  13154888 ctaaaatatagttttgatccttgcaaatatgcctcgttttggttttagtccctgtaa 13154944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 13155249 - 13155193
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| || | ||||||||||| |||||||| |||||||| ||||||    
T  13155249 ctaaaatatggtttttgttcctgcaaatatgtctcgttttggttttaatccctgtaa 13155193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 14488718 - 14488774
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| || |||||||  |||||||| ||||| |||||||||    
T  14488718 ctaaaatatagttttagtccctgaaaatatgcctcgttttggttttagtctctgtaa 14488774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 17073809 - 17073865
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||    
T  17073809 ctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctgtaa 17073865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 17574461 - 17574405
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||    
T  17574461 ctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtccctgtaa 17574405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 21126019 - 21125963
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| ||||||| |||||||  |||||||| ||||| || ||||||    
T  21126019 ctaaaatatagttttagtccatgtaaatatgactcgttttggttttagtccctgtaa 21125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 345
Target Start/End: Complemental strand, 28258222 - 28258194
Alignment:
Q  317 cctctgcaaatatgtctcgttttggtttt 345  Q
    |||||||||||||||||||||||||||||    
T  28258222 cctctgcaaatatgtctcgttttggtttt 28258194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 29158356 - 29158412
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  29158356 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 29158412  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 30337215 - 30337175
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttg 272  Q
    ||||||||||||||| |||| ||||||||||| ||||||||    
T  30337215 ctaaaatatagttttagtccctgcaaatatgtctcgttttg 30337175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 44997933 - 44997981
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaat 280  Q
    |||||||||  ||||||||| ||||||||||  ||||||||||||||||    
T  44997933 ctaaaatatgattttggtccctgcaaatatgcctcgttttgattttaat 44997981  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 12322968 - 12322912
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||| ||||||    
T  12322968 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttaatccctgtaa 12322912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 17130083 - 17130032
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  17130083 gactaaaatatggttttggtccctgcaaatatgtctcgttttggttttaatc 17130032  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 4789308 - 4789366
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  4789308 gactaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 4789366  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 10887235 - 10887281
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  10887235 ctaaaatatggttttggtccctgcaaatatgtttcgttttggtttta 10887281  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 12322606 - 12322652
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  12322606 ctaaaatatggttttgatccctgcaaatatgtttcgttttgatttta 12322652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 26207278 - 26207336
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  26207278 gactaaaatatggttttggtccttgcaaatatgtctcgttttggttttagtccctgtaa 26207336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 46183683 - 46183732
Alignment:
Q  229 tgactaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||||||| |||||||||| |||||||||| ||||||||| |||||    
T  46183683 tgactaaaatatggttttggtccctgcaaatatgcttcgttttggtttta 46183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 49073693 - 49073742
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatc 281  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  49073693 ctaaaatatggttttggtccttgcaaatatgtctcgttttggttttaatc 49073742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 3247200 - 3247256
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  3247200 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 3247256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 4323830 - 4323886
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| |||||||||    
T  4323830 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtctctgtaa 4323886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 8140436 - 8140492
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  8140436 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 8140492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 10631166 - 10631222
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  10631166 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 10631222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 12360966 - 12360910
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  12360966 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 12360910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 19720714 - 19720770
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  19720714 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 19720770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 22674205 - 22674261
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||| ||||||||||||||||| |||||||| ||||| ||| |||||    
T  22674205 ctaaaatatggtttaggtccatgcaaatatgtctcgttttggttttagtctttgtaa 22674261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 27521578 - 27521634
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||| || ||||||    
T  27521578 ctaaaatatggttttagtccctgcaaatatgtctcgttttgattttagtccctgtaa 27521634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 33000307 - 33000363
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||  |||||||||||||| || ||||||    
T  33000307 ctaaaatatggttttggtccctgcaaatatgcctcgttttgattttagtccctgtaa 33000363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 39025112 - 39025156
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||    
T  39025112 taaaatatggttttggtccctgcaaatatgtctcgttttgatttt 39025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 39747833 - 39747777
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  39747833 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 39747777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 42482981 - 42483037
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| || ||||| ||||| |||||||||    
T  42482981 ctaaaatatggttttggtccctgcaaatatgtctcattttggttttagtctctgtaa 42483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 45638892 - 45638844
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaat 280  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||||    
T  45638892 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttaat 45638844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 50428875 - 50428931
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| |||||||| ||||||    
T  50428875 ctaaaatatggttttagtccttgcaaatatgtctcgttttgcttttaatccctgtaa 50428931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 4617091 - 4617146
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||||||| || ||||||||||||||||  ||||| |||||||||    
T  4617091 taaaatatggttttggtccctgaaaatatgtttcgttttagttttagtctctgtaa 4617146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 8364619 - 8364674
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||| || ||||||    
T  8364619 taaaatatggttttgatccctgcaaatatgtttcgttttggttttagtcactgtaa 8364674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 33234917 - 33234854
Alignment:
Q  225 ttaatgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||| |||||||||  ||||||||| ||||||||||  |||||||||||||| || ||||||    
T  33234917 ttaatggctaaaatatgattttggtccctgcaaatatgcctcgttttgattttagtccctgtaa 33234854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 10887596 - 10887550
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  10887596 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 10887550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 15526360 - 15526314
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  15526360 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 15526314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Original strand, 22953256 - 22953298
Alignment:
Q  230 gactaaaatatagttttggtccatgcaaatatgtttcgttttg 272  Q
    ||||||||||||||||| |||||||||||||||| || |||||    
T  22953256 gactaaaatatagttttagtccatgcaaatatgtctcattttg 22953298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 24654165 - 24654119
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  24654165 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 24654119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 24977780 - 24977826
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  24977780 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 24977826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 30322931 - 30322977
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  30322931 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 30322977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 32420100 - 32420146
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  32420100 ctaaaatatggttttggtccttgcaaatatgtctcgttttggtttta 32420146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 33000667 - 33000621
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  33000667 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 33000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 350
Target Start/End: Original strand, 34002657 - 34002687
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtct 350  Q
    |||||||||||||||||||||||||||||||    
T  34002657 ctgcaaatatgtctcgttttggttttggtct 34002687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 35056532 - 35056578
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  35056532 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 35056578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 40718112 - 40718158
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  40718112 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 40718158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 45380274 - 45380320
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  45380274 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 45380320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 51986503 - 51986469
Alignment:
Q  243 ttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||||||||||||||||||    
T  51986503 ttttggtccctgcaaatatgtttcgttttgatttt 51986469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 7350654 - 7350621
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  7350654 ctgcaaatatgcctcgttttggttttggtctctg 7350621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 8364914 - 8364869
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||||||||||||||  |||||||||| |||||||| ||||    
T  8364914 ctaaaatatagttttggtccccgcaaatatgtctcgttttggtttt 8364869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 18927859 - 18927892
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||| |||||||||||||||||||||    
T  18927859 ctgcaaatatgtttcgttttggttttggtctctg 18927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 26699372 - 26699405
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||||||||||||||||||| ||||||    
T  26699372 ctgcaaatatgtctcgttttggttttgatctctg 26699405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 28507197 - 28507230
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtctctg 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  28507197 ctgcaaatatgcctcgttttggttttggtctctg 28507230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 32906237 - 32906192
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  32906237 taaaatatgattttggtccttgcaaatatgtctcgttttgatttta 32906192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 36912855 - 36912896
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttga 273  Q
    ||||||||| |||||||||| ||||||||||| |||||||||    
T  36912855 ctaaaatatggttttggtccctgcaaatatgtctcgttttga 36912896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 38150851 - 38150896
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  38150851 taaaatatggttttggtccctgcaaatatgtctcgttttggtttta 38150896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 49074051 - 49074006
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttt 277  Q
    ||||||||| |||||||||| || ||||||| ||||||||||||||    
T  49074051 ctaaaatatggttttggtccttgtaaatatgcttcgttttgatttt 49074006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 4565334 - 4565278
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||| |||||| ||||||||||| ||||||| |||||| || ||||||    
T  4565334 ctaaaatatggttctggtccctgcaaatatgtctcgttttaattttagtccctgtaa 4565278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 6567494 - 6567438
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  6567494 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 6567438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 7818784 - 7818840
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||| ||||||||||  |||||||| ||||| | |||||||    
T  7818784 ctaaaatatagttttagtccctgcaaatatgcctcgttttggttttagtttctgtaa 7818840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 11822363 - 11822307
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  11822363 ctaaaatatggttttagtccctgcaaatatgtctcgttttgcttttagtccctgtaa 11822307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 14007491 - 14007547
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  14007491 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctgtaa 14007547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Complemental strand, 15211773 - 15211745
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  15211773 tgcaaatatgtctcgttttggttttggtc 15211745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Complemental strand, 17130001 - 17129973
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  17130001 tgcaaatatgtctcgttttggttttggtc 17129973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 20948998 - 20948966
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtctctg 353  Q
    |||||||||||||| ||||||||||||||||||    
T  20948998 tgcaaatatgtctcattttggttttggtctctg 20948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 26324945 - 26324889
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    |||||||||  |||| |||||||||||||||  |||||||| ||||| |||||||||    
T  26324945 ctaaaatatgattttagtccatgcaaatatgcctcgttttggttttagtctctgtaa 26324889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 26442897 - 26442841
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||||||||||||||  |||||||| ||||| || ||||||    
T  26442897 ctaaaatatggttttagtccatgcaaatatgcctcgttttggttttagtccctgtaa 26442841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 33067371 - 33067399
Alignment:
Q  321 tgcaaatatgtctcgttttggttttggtc 349  Q
    |||||||||||||||||||||||||||||    
T  33067371 tgcaaatatgtctcgttttggttttggtc 33067399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 33067728 - 33067680
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaat 280  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| |||||||    
T  33067728 ctaaaatatcgttttagtccttgcaaatatgtctcgttttggttttaat 33067680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 48609592 - 48609536
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||| |||||||| ||||| || ||||||    
T  48609592 ctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtcactgtaa 48609536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 52254477 - 52254421
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||| || ||||||    
T  52254477 ctaaaatatggttttagtccctgcaaatatgcctcgttttgattttagtccctgtaa 52254421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 27362 - 27306
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  27362 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 27306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 148280 - 148224
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| || ||||||    
T  148280 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctgtaa 148224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 8332 - 8378
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  8332 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8640 - 8594
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  8640 ctaaaatatggttttagtccctgcaaatatgtctcgttttgatttta 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 2503 - 2549
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||| ||| |||||||||| |||||||||||||||    
T  2503 ctaaaatatggttttgatccctgcaaatatgcttcgttttgatttta 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 2881 - 2835
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| ||||||||| ||||    
T  2881 ctaaaatatggttttggtccctgcaaatatgtctcgttttgagttta 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 47927 - 47973
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    ||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  47927 ctaaaatatggttttggtccctgcaaatatgtctcgttttggtttta 47973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 222893 - 222922
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  222893 ctgcaaatatgtctcgttttggttttggtc 222922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Original strand, 21772 - 21801
Alignment:
Q  320 ctgcaaatatgtctcgttttggttttggtc 349  Q
    ||||||||||||||||||||||||||||||    
T  21772 ctgcaaatatgtctcgttttggttttggtc 21801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 50075 - 50030
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  50075 taaaatatggttttggtccctgcaaatatgtctcgttttggtttta 50030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 55176 - 55131
Alignment:
Q  233 taaaatatagttttggtccatgcaaatatgtttcgttttgatttta 278  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||    
T  55176 taaaatatggttttggtccctgcaaatatgtctcgttttggtttta 55131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 8730 - 8790
Alignment:
Q  228 atgactaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||| ||||| |||| ||||||||||  |||||||| ||||| || ||||||    
T  8730 atgactaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtccctgtaa 8790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 75361 - 75417
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||| |||||| ||| ||||||||||| |||||||| ||||| || ||||||    
T  75361 ctaaaatatggttttgctccctgcaaatatgtctcgttttggttttagtccctgtaa 75417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 189676 - 189620
Alignment:
Q  232 ctaaaatatagttttggtccatgcaaatatgtttcgttttgattttaatctctgtaa 288  Q
    ||||||||||||||| |||  ||||||||||  || ||||| |||||||||||||||    
T  189676 ctaaaatatagtttttgtcgctgcaaatatgcctcattttggttttaatctctgtaa 189620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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