View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18633_low_25 (Length: 251)

Name: NF18633_low_25
Description: NF18633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18633_low_25
NF18633_low_25
[»] chr2 (38 HSPs)
chr2 (1-229)||(14291534-14291763)
chr2 (1-229)||(9296224-9296452)
chr2 (1-232)||(11098746-11098978)
chr2 (1-225)||(3491796-3492018)
chr2 (1-171)||(25398541-25398711)
chr2 (1-171)||(25403679-25403849)
chr2 (1-171)||(25407668-25407838)
chr2 (1-225)||(28259010-28259228)
chr2 (5-225)||(36757595-36757809)
chr2 (1-225)||(40738888-40739098)
chr2 (8-225)||(23078304-23078514)
chr2 (1-135)||(39811895-39812027)
chr2 (1-135)||(32246834-32246966)
chr2 (1-134)||(42039588-42039720)
chr2 (1-98)||(44312567-44312663)
chr2 (1-134)||(8040106-8040240)
chr2 (8-134)||(10707172-10707296)
chr2 (1-155)||(8390049-8390201)
chr2 (1-225)||(13569374-13569593)
chr2 (1-225)||(34388904-34389115)
chr2 (1-100)||(10445397-10445495)
chr2 (182-225)||(25409854-25409897)
chr2 (188-235)||(39811847-39811894)
chr2 (1-225)||(21629989-21630209)
chr2 (1-100)||(34682287-34682385)
chr2 (189-233)||(32246968-32247012)
chr2 (1-100)||(14698961-14699058)
chr2 (1-53)||(20522266-20522319)
chr2 (1-100)||(31056090-31056188)
chr2 (1-100)||(39482977-39483075)
chr2 (1-83)||(17865249-17865330)
chr2 (1-43)||(27149303-27149345)
chr2 (1-53)||(2869691-2869744)
chr2 (1-100)||(33118182-33118280)
chr2 (1-53)||(33528619-33528672)
chr2 (182-225)||(17865428-17865469)
chr2 (1-52)||(19344467-19344518)
chr2 (1-52)||(19349325-19349376)
[»] chr8 (33 HSPs)
chr8 (1-232)||(33037627-33037857)
chr8 (1-232)||(4759893-4760126)
chr8 (1-235)||(30655692-30655927)
chr8 (1-232)||(10688959-10689194)
chr8 (1-232)||(36979423-36979654)
chr8 (1-235)||(18870377-18870613)
chr8 (1-235)||(18852983-18853219)
chr8 (1-235)||(6311343-6311579)
chr8 (1-232)||(1261776-1262005)
chr8 (1-225)||(31071058-31071280)
chr8 (1-225)||(26287947-26288158)
chr8 (1-225)||(26301204-26301415)
chr8 (1-225)||(26313198-26313409)
chr8 (1-225)||(19175587-19175805)
chr8 (1-225)||(4456074-4456292)
chr8 (1-225)||(7412387-7412604)
chr8 (1-135)||(7289832-7289965)
chr8 (1-135)||(25328185-25328317)
chr8 (1-100)||(19752347-19752445)
chr8 (1-134)||(23799496-23799628)
chr8 (188-235)||(7289784-7289831)
chr8 (188-233)||(25328013-25328058)
chr8 (188-233)||(25328139-25328184)
chr8 (1-100)||(6127267-6127365)
chr8 (1-209)||(26403076-26403281)
chr8 (189-233)||(39784684-39784728)
chr8 (1-53)||(6813729-6813782)
chr8 (1-51)||(39784813-39784861)
chr8 (1-53)||(9054835-9054888)
chr8 (182-225)||(4696441-4696482)
chr8 (182-225)||(9054253-9054294)
chr8 (1-52)||(10684252-10684303)
chr8 (1-52)||(35745437-35745488)
[»] chr7 (46 HSPs)
chr7 (1-235)||(20357363-20357598)
chr7 (1-232)||(2058011-2058246)
chr7 (1-232)||(1533263-1533495)
chr7 (1-225)||(21639854-21640076)
chr7 (1-225)||(21646052-21646274)
chr7 (1-225)||(18413685-18413906)
chr7 (1-225)||(18408809-18409030)
chr7 (1-225)||(2479382-2479600)
chr7 (1-209)||(21983330-21983536)
chr7 (1-170)||(44848568-44848735)
chr7 (6-135)||(12406382-12406510)
chr7 (1-209)||(29159849-29160055)
chr7 (5-135)||(12396961-12397090)
chr7 (1-100)||(2580436-2580533)
chr7 (1-135)||(24024233-24024365)
chr7 (1-135)||(31109490-31109622)
chr7 (1-100)||(9189961-9190059)
chr7 (1-225)||(21988952-21989172)
chr7 (55-225)||(47263764-47263930)
chr7 (188-235)||(12397091-12397138)
chr7 (188-235)||(31109442-31109489)
chr7 (190-235)||(4873310-4873355)
chr7 (190-235)||(12406513-12406558)
chr7 (1-100)||(55993-56091)
chr7 (1-100)||(2647649-2647747)
chr7 (188-235)||(24024185-24024232)
chr7 (1-51)||(19992359-19992408)
chr7 (1-100)||(46516263-46516361)
chr7 (1-100)||(49091707-49091805)
chr7 (1-98)||(20284135-20284230)
chr7 (1-46)||(4866776-4866820)
chr7 (1-52)||(16880119-16880169)
chr7 (1-52)||(16884975-16885025)
chr7 (1-36)||(47263722-47263757)
chr7 (38-100)||(9185128-9185189)
chr7 (1-53)||(5817268-5817321)
chr7 (189-233)||(21812098-21812143)
chr7 (1-53)||(28617223-28617276)
chr7 (1-53)||(33332448-33332501)
chr7 (182-225)||(2580613-2580654)
chr7 (182-225)||(4796501-4796542)
chr7 (182-225)||(9185007-9185048)
chr7 (182-225)||(20284312-20284353)
chr7 (182-225)||(23402846-23402887)
chr7 (1-52)||(24261311-24261362)
chr7 (1-52)||(24266190-24266241)
[»] chr4 (42 HSPs)
chr4 (1-232)||(24741986-24742218)
chr4 (1-232)||(29760687-29760919)
chr4 (1-225)||(28468367-28468580)
chr4 (1-225)||(31985466-31985685)
chr4 (1-225)||(5396504-5396722)
chr4 (1-135)||(51520503-51520636)
chr4 (1-135)||(9224313-9224446)
chr4 (1-135)||(9229100-9229233)
chr4 (1-135)||(45347723-45347856)
chr4 (1-225)||(16623126-16623344)
chr4 (1-135)||(45357203-45357335)
chr4 (2-170)||(5147724-5147891)
chr4 (1-225)||(3777595-3777813)
chr4 (1-135)||(3814070-3814201)
chr4 (1-119)||(36315163-36315280)
chr4 (1-119)||(36329372-36329489)
chr4 (188-235)||(51520637-51520684)
chr4 (1-132)||(5732711-5732839)
chr4 (1-170)||(5143305-5143473)
chr4 (1-88)||(56146664-56146750)
chr4 (188-235)||(18712624-18712671)
chr4 (38-225)||(8689329-8689509)
chr4 (1-100)||(10047425-10047523)
chr4 (189-233)||(45347677-45347721)
chr4 (188-235)||(9224265-9224312)
chr4 (188-235)||(9229052-9229099)
chr4 (1-100)||(3796472-3796570)
chr4 (188-233)||(3814202-3814247)
chr4 (189-233)||(5732844-5732888)
chr4 (110-225)||(16628705-16628815)
chr4 (5-83)||(16630650-16630727)
chr4 (1-97)||(38152395-38152490)
chr4 (1-53)||(5112283-5112336)
chr4 (1-53)||(39246040-39246093)
chr4 (189-233)||(18855906-18855950)
chr4 (189-233)||(45357157-45357201)
chr4 (1-40)||(6743427-6743466)
chr4 (1-40)||(24333855-24333894)
chr4 (1-39)||(5269204-5269242)
chr4 (1-51)||(18855773-18855821)
chr4 (182-225)||(5112460-5112501)
chr4 (182-225)||(10047604-10047645)
[»] chr3 (48 HSPs)
chr3 (1-232)||(2671405-2671637)
chr3 (1-232)||(8738882-8739114)
chr3 (1-232)||(9091120-9091352)
chr3 (1-232)||(40372615-40372846)
chr3 (1-235)||(7167290-7167526)
chr3 (1-232)||(8477408-8477642)
chr3 (1-235)||(28501513-28501748)
chr3 (1-235)||(28503680-28503915)
chr3 (1-225)||(26928421-26928642)
chr3 (1-225)||(32143367-32143587)
chr3 (3-225)||(1305996-1306216)
chr3 (1-225)||(27453004-27453224)
chr3 (1-225)||(27974774-27974993)
chr3 (1-225)||(16264396-16264613)
chr3 (1-134)||(6794623-6794754)
chr3 (1-135)||(22173101-22173234)
chr3 (1-225)||(8370311-8370527)
chr3 (1-225)||(27986278-27986487)
chr3 (3-225)||(36029141-36029357)
chr3 (1-225)||(33386497-33386707)
chr3 (1-225)||(21711269-21711486)
chr3 (4-221)||(35925529-35925738)
chr3 (1-225)||(40592604-40592823)
chr3 (188-235)||(22173053-22173100)
chr3 (1-132)||(18656481-18656609)
chr3 (1-100)||(18552826-18552924)
chr3 (1-100)||(48438260-48438358)
chr3 (1-134)||(3715911-3716043)
chr3 (1-100)||(1736248-1736346)
chr3 (1-100)||(40844697-40844795)
chr3 (189-233)||(18656614-18656658)
chr3 (1-53)||(4386915-4386968)
chr3 (1-100)||(25795827-25795925)
chr3 (1-100)||(30709733-30709831)
chr3 (1-100)||(3328300-3328397)
chr3 (182-223)||(10274605-10274646)
chr3 (1-53)||(26299034-26299087)
chr3 (1-52)||(2672919-2672970)
chr3 (1-52)||(2677075-2677126)
chr3 (182-225)||(3323513-3323554)
chr3 (5-53)||(3323679-3323727)
chr3 (182-225)||(3328179-3328220)
chr3 (182-225)||(4386799-4386840)
chr3 (1-52)||(8512263-8512314)
chr3 (1-52)||(8517143-8517194)
chr3 (182-225)||(26299211-26299252)
chr3 (1-53)||(37466337-37466389)
chr3 (182-225)||(47923726-47923767)
[»] chr5 (45 HSPs)
chr5 (1-235)||(30631452-30631687)
chr5 (1-235)||(31180260-31180494)
chr5 (1-229)||(24135894-24136121)
chr5 (1-225)||(38219444-38219666)
chr5 (1-232)||(35387708-35387937)
chr5 (1-151)||(38192219-38192369)
chr5 (1-225)||(15464578-15464798)
chr5 (1-225)||(9353165-9353383)
chr5 (1-225)||(14520276-14520494)
chr5 (1-225)||(36932181-36932401)
chr5 (1-135)||(1457068-1457201)
chr5 (1-135)||(27445016-27445149)
chr5 (1-135)||(27449860-27449993)
chr5 (1-135)||(43592325-43592458)
chr5 (1-135)||(43598770-43598903)
chr5 (1-135)||(43604262-43604395)
chr5 (1-135)||(43609754-43609887)
chr5 (1-135)||(15044732-15044864)
chr5 (1-134)||(12084096-12084226)
chr5 (1-225)||(11916805-11917023)
chr5 (1-134)||(10281797-10281929)
chr5 (1-133)||(3880345-3880476)
chr5 (188-235)||(1457020-1457067)
chr5 (188-235)||(27445150-27445197)
chr5 (188-235)||(27449994-27450041)
chr5 (188-235)||(43592459-43592506)
chr5 (188-235)||(43598904-43598951)
chr5 (188-235)||(43604396-43604443)
chr5 (188-235)||(43609888-43609935)
chr5 (1-131)||(28807485-28807611)
chr5 (188-235)||(15044865-15044913)
chr5 (1-50)||(37556613-37556661)
chr5 (1-50)||(37561435-37561483)
chr5 (189-233)||(28807435-28807479)
chr5 (8-100)||(31300549-31300640)
chr5 (1-98)||(19588792-19588888)
chr5 (1-53)||(28832305-28832357)
chr5 (1-100)||(42127364-42127461)
chr5 (1-52)||(2785421-2785472)
chr5 (182-225)||(24553360-24553401)
chr5 (182-225)||(28832480-28832521)
chr5 (1-52)||(31396981-31397032)
chr5 (1-52)||(31401838-31401889)
chr5 (1-52)||(33768225-33768276)
chr5 (1-52)||(33791362-33791413)
[»] chr1 (37 HSPs)
chr1 (1-235)||(24787180-24787415)
chr1 (1-232)||(24202591-24202820)
chr1 (1-221)||(19358677-19358894)
chr1 (1-225)||(19361262-19361483)
chr1 (1-210)||(19379916-19380123)
chr1 (1-225)||(13604455-13604674)
chr1 (64-225)||(19366137-19366297)
chr1 (1-225)||(3281754-3281971)
chr1 (1-221)||(26644735-26644948)
chr1 (1-135)||(41390627-41390759)
chr1 (1-135)||(41398282-41398414)
chr1 (1-210)||(21536416-21536620)
chr1 (1-225)||(37069816-37070031)
chr1 (1-100)||(32889485-32889583)
chr1 (1-134)||(47703855-47703987)
chr1 (188-235)||(41390760-41390807)
chr1 (188-235)||(41398415-41398462)
chr1 (1-135)||(25444996-25445128)
chr1 (1-88)||(9476307-9476393)
chr1 (1-100)||(16124469-16124567)
chr1 (1-53)||(27104370-27104423)
chr1 (1-100)||(47098778-47098875)
chr1 (1-53)||(19072974-19073027)
chr1 (1-53)||(19120864-19120917)
chr1 (1-100)||(29651857-29651955)
chr1 (189-233)||(1054873-1054917)
chr1 (189-233)||(25439757-25439801)
chr1 (189-233)||(25444950-25444994)
chr1 (189-233)||(39445679-39445723)
chr1 (189-233)||(44023735-44023779)
chr1 (1-51)||(39445546-39445594)
chr1 (1-51)||(44023864-44023912)
chr1 (9-53)||(48382479-48382524)
chr1 (1-83)||(13598444-13598525)
chr1 (1-52)||(43988452-43988503)
chr1 (182-225)||(47098658-47098699)
chr1 (182-225)||(47102672-47102713)
[»] chr6 (29 HSPs)
chr6 (1-232)||(5674589-5674821)
chr6 (1-225)||(5757311-5757529)
chr6 (1-225)||(22709064-22709274)
chr6 (1-225)||(21356082-21356301)
chr6 (1-135)||(11857020-11857153)
chr6 (1-135)||(22010603-22010736)
chr6 (1-135)||(14737483-14737615)
chr6 (1-135)||(14742343-14742475)
chr6 (1-135)||(28184551-28184683)
chr6 (1-135)||(28155477-28155608)
chr6 (188-235)||(11857154-11857201)
chr6 (188-235)||(14737435-14737482)
chr6 (188-235)||(22010555-22010602)
chr6 (188-235)||(14742295-14742342)
chr6 (1-225)||(5572076-5572292)
chr6 (1-100)||(31086426-31086524)
chr6 (189-233)||(28155431-28155475)
chr6 (1-100)||(10077118-10077216)
chr6 (1-53)||(22963745-22963798)
chr6 (1-53)||(23824595-23824648)
chr6 (189-233)||(6438680-6438724)
chr6 (1-40)||(4630000-4630039)
chr6 (1-51)||(6438547-6438595)
chr6 (1-135)||(16838790-16838923)
chr6 (1-52)||(6005463-6005514)
chr6 (2-53)||(21801342-21801394)
chr6 (188-235)||(28184684-28184734)
chr6 (1-52)||(33330433-33330484)
chr6 (1-52)||(33335930-33335981)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-225)||(17781-18003)
scaffold0188 (1-225)||(23874-24096)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-225)||(133112-133331)
scaffold0006 (3-40)||(2540-2577)
scaffold0006 (1-83)||(5729-5810)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-225)||(8250-8470)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-225)||(36665-36883)
scaffold0087 (1-221)||(43798-44012)
[»] scaffold0135 (2 HSPs)
scaffold0135 (1-135)||(34968-35101)
scaffold0135 (188-235)||(34920-34967)
[»] scaffold0355 (4 HSPs)
scaffold0355 (1-135)||(9550-9681)
scaffold0355 (188-235)||(3707-3754)
scaffold0355 (57-135)||(3755-3833)
scaffold0355 (188-223)||(9514-9549)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-128)||(85729-85854)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-88)||(10775-10861)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-97)||(17309-17404)
[»] scaffold0464 (2 HSPs)
scaffold0464 (189-233)||(542-586)
scaffold0464 (1-51)||(409-457)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-39)||(45299-45337)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-52)||(14297-14348)


Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14291534 - 14291763
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291534 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 14291633  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14291634 atgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 14291733  T
Q  200 tacaatgtttttcccaacccaagagacact 229  Q
    ||||||||||||||||||||||||||||||    
T  14291734 tacaatgtttttcccaacccaagagacact 14291763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 9296452 - 9296224
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9296452 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttatacaagaacaagccctagattctacccat 9296353  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||    
T  9296352 atgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaactcctcactacccaaggtgat 9296254  T
Q  200 tacaatgtttttcccaacccaagagacact 229  Q
    |||||||||||||||||||||| |||||||    
T  9296253 tacaatgtttttcccaacccaatagacact 9296224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 11098978 - 11098746
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| |    
T  11098978 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagcttacacaagaacaaaccctagattctaccctt 11098879  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  11098878 tggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgtactcctcactacccaaggtgat 11098779  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||    
T  11098778 tacaatgtttttcccaacccaagagacactctc 11098746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3491796 - 3492018
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  3491796 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 3491894  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| | |||||||||||| |  || | | |||||||||||||||| |    
T  3491895 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaa-tggtggaat-ctcactacccaaggtgtt 3491992  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||| |||||||||||||    
T  3491993 tacaatgttttttccaacccaagaga 3492018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25398541 - 25398711
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  25398541 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 25398639  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaac 171  Q
     |||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  25398640 ttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaac 25398711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25403679 - 25403849
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  25403679 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 25403777  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaac 171  Q
     |||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  25403778 ttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaac 25403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25407668 - 25407838
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  25407668 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 25407766  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaac 171  Q
     |||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  25407767 ttgtgtttctccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaac 25407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28259228 - 28259010
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||  |||  ||||||||||    
T  28259228 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagatctaatttctacccat 28259131  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| |||| ||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | ||||||||||||| || |    
T  28259130 ttgtgttt-cccactctctcaataatgacccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaagatgtt 28259034  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  28259033 tacaatg--tttcccaacccaagaga 28259010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 36757809 - 36757595
Alignment:
Q  5 cagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatatgt 104  Q
    ||||||||||||||| ||||||||||||||| ||||| |||| |||||  || ||| |||||||||||||||||||||  ||||  |||||||||| |||    
T  36757809 cagctctccaatccagtatgatgaaagtgtttcaaagagttataagaa--aaaagctttcaagcttacacaagaacaaaacctaatttctacccatttgt 36757712  T
Q  105 gtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgattaca 203  Q
    | || ||||||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |||||    
T  36757711 g-ttacccactctctcaatgatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttaca 36757615  T
Q  204 atgtttttcccaacccaagaga 225  Q
    |||  |||||||||||||||||    
T  36757614 atg--tttcccaacccaagaga 36757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 40738888 - 40739098
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||| | |||||||||||||||||||| | ||| ||||||||||    
T  40738888 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagcttgcaagcttacacaagaacaagtcttagtttctacccat 40738976  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| | || |||| || ||||||||||| |  |||| | |||| ||||||||||| |    
T  40738977 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaatagtaagcttttgatccttccaa-tggtgaaat-ctcattacccaaggtgtt 40739074  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  40739075 tacaatg--tttcccaacccaagaga 40739098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 23078514 - 23078304
Alignment:
Q  8 ctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatatgtgtt 107  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||  |||||| | |||||||||||||||||||| | ||  |||||||||| ||||||    
T  23078514 ctctccaatccactatgatgaaagtgttagaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacttaatttctacccatttgtgtt 23078417  T
Q  108 tccc-cactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgattacaatg 206  Q
     ||| |||||||| |  ||||||||| |||||||| ||| | ||||||| || ||||||||||| | ||||| | |||||||||||||||| ||||||||    
T  23078416 acccacactctca-atgatgaaccct-aagagaagacacaaaaggaagcttttgatccttccaa-tgatgaaat-ctcactacccaaggtgtttacaatg 23078321  T
Q  207 tttttcccaacccaagaga 225  Q
      |||||||||||||||||    
T  23078320 --tttcccaacccaagaga 23078304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39812027 - 39811895
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  39812027 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 39811931  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  39811930 ttggtattttcccactctcacactatgaaccctaaa 39811895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32246834 - 32246966
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| ||||||||| ||||| |||||| ||||||||| |||||     
T  32246834 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagctttacacatgaacaaaccctagattataccct 32246930  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  32246931 ttggtattttcccactctcacactatgaaccctaaa 32246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 42039720 - 42039588
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| | |||| | ||||||||||||| |||||| ||||  ||||||||||    
T  42039720 agagcagctctctaatccactatgatgaaagtgttacgaagagttacaagaaa-attagcttgcaagcttacacaaaaacaagacctaatttctacccat 42039622  T
Q  101 atgtgtttc-cccactctcacaatatgaaccctaa 134  Q
     | ||| || ||||||||||||||||||| |||||    
T  42039621 -tttgtgtcacccactctcacaatatgaatcctaa 42039588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44312663 - 44312567
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccc 98  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||  |||||||||||| ||||||| |||||| |||||||||||||||    
T  44312663 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccc 44312567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8040106 - 8040240
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaa---agggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacc 97  Q
    ||||||||||||||||||| |||||||||||||||||||   || ||||||||||  | |||| | |||||||||||||||||||| ||||  |||||||    
T  8040106 agagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaa--attagcttacaagcttacacaagaacaagacctaatttctacc 8040203  T
Q  98 catatgtgtttc-cccactctcacaatatgaaccctaa 134  Q
    ||| | ||| || ||||||||||||||||||| |||||    
T  8040204 cat-tttgtgtcacccactctcacaatatgaatcctaa 8040240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 10707296 - 10707172
Alignment:
Q  8 ctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatatgtgt 106  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||  | |||| | |||||||||||||||||||| ||||  |||||||||| ||||     
T  10707296 ctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttacacaagaacaagacctaatttctacccatctgtg- 10707200  T
Q  107 ttccccactctcacaatatgaaccctaa 134  Q
    |  ||||||||||||||||||| |||||    
T  10707199 tcacccactctcacaatatgaatcctaa 10707172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 8390201 - 8390049
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgtt-acaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||  | |||| | ||||||| |||||||||||| ||||  |||||||||    
T  8390201 agagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaa--attagcttacaagcttgcacaagaacaagacctaatttctaccca 8390104  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc 155  Q
    | | ||| || ||||||||||||||||||| ||| |||||||  ||| |||||||||    
T  8390103 t-tttgtgtcacccactctcacaatatgaatcct-aagagaaaacacaagaggaagc 8390049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13569374 - 13569593
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||| ||||||||||||||| ||||  ||||||||     
T  13569374 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagtttacacaagaacaagacctaatttctaccc- 13569470  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    | ||| | || ||||||||||||||||||| ||| |||||||  ||| | |||||||  || ||||||||||| |  |||| | ||||||| ||||||||    
T  13569471 tttgtttgtcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaagctttttgatccttccaa-tggtgaaat-ctcactatccaaggtg 13569567  T
Q  198 attacaatgtttttcccaacccaagaga 225  Q
     ||| ||||  |||||||||||||||||    
T  13569568 tttataatg--tttcccaacccaagaga 13569593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 34388904 - 34389115
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||| |||||||||||||| ||||||||||||||||| |||| |||||||||||        ||  |||||||||||||||||| ||||  |||||||||    
T  34388904 agagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa--------tt--agcttacacaagaacaagacctaatttctaccca 34388993  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    | | ||| || ||||||||||||||||||| ||| |||||||  ||| | |||||||  || ||||||||||| |  |||| | ||||||||||||||||    
T  34388994 t-tttgtgtcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaagctttttgatccttccaa-tggtgaaat-ctcactacccaaggtg 34389089  T
Q  198 attacaatgtttttcccaacccaagaga 225  Q
     ||||||||  |||||||||||||||||    
T  34389090 tttacaatg--tttcccaacccaagaga 34389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10445495 - 10445397
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||  | |||| | ||| |||||||||||||||| ||||  |||||||||    
T  10445495 agagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaa--attagcttacaatcttacacaagaacaagacctaatttctaccca 10445398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 25409854 - 25409897
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  25409854 ctcactacccaaggtgtttacaatgtttttcccaacccaagaga 25409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 39811894 - 39811847
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  39811894 acccaaggtgattacaatgtttttctcaacctaagagacactctcaac 39811847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21629989 - 21630209
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||  |  ||||||||||||||||||| | ||  |||||||||    
T  21629989 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagtttataagcttacacaagaacaagacttaatttctaccca 21630086  T
Q  100 tatgtgtttc-cccactctcacaat-atgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggt 196  Q
    | | ||| || ||||| ||| |||| ||||| ||| |||||||  ||| | |||||||  || ||||||||||| |  |||| | |||||||||||||||    
T  21630087 t-tttgtgtcacccacactctcaataatgaatcct-aagagaaaacacaaaaggaagctttttgatccttccaa-tggtgaaat-ctcactacccaaggt 21630182  T
Q  197 gattacaatgtttttcccaacccaagaga 225  Q
    | ||||||||  |||||||||||||||||    
T  21630183 gtttacaatg--tttcccaacccaagaga 21630209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 34682385 - 34682287
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||  | |||| | || ||||||||||||||||| | ||  |||||||||    
T  34682385 agagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa--attagcttacaggcttacacaagaacaagacttaatttctaccca 34682288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 32246968 - 32247012
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  32246968 cccaaggtgattacaatgtttttcccaacctaagaaacactctca 32247012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14699058 - 14698961
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||| |||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  14699058 agagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 14698962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20522266 - 20522319
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||| | |||||||||| ||||||||||||||||| ||||||||||||||||    
T  20522266 agagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaaa 20522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31056090 - 31056188
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||||| ||  | |||| |  ||||||||| ||||||||| ||||  |||||||||    
T  31056090 agagcagctctccaatccactaagatgaaagtgttacaaaagagttacaataa--attagcttataagcttacaaaagaacaagacctaatttctaccca 31056187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 39482977 - 39483075
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||  |||||||||| |||||||||| ||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  39482977 agagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 39483074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17865249 - 17865330
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaag 83  Q
    |||||| | |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  |||||||||||||||||||    
T  17865249 agagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaag 17865330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27149345 - 27149303
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaaggg 43  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||    
T  27149345 agagcagctctccaatccactataatgaaagtgatacaaaggg 27149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2869744 - 2869691
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaa 53  Q
    |||| |||||||||||||| || |||||||||| |||||||| |||||||||||    
T  2869744 agagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaa 2869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33118182 - 33118280
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||| ||||||||   |||||||||||   |||| |  ||||||||||||||||||| | ||  |||||||||    
T  33118182 agagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaat--tagcttataagcttacacaagaacaagacttaatttctaccca 33118279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33528672 - 33528619
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||| | |||||||||| ||||||||||||||||| |||| |||||||||||    
T  33528672 agagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 33528619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 17865428 - 17865469
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  17865428 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 17865469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19344467 - 19344518
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  19344467 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 19344518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19349325 - 19349376
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  19349325 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 19349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 33037857 - 33037627
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33037857 agagcagctctccaatccaatatga-gaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaaaccctagattctacccat 33037759  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33037758 atgtgtttccccactctcacaatatgaaccctaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgatt 33037659  T
Q  201 acaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||||||||    
T  33037658 acaatgtttttcccaacccaagagacactctc 33037627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 4760126 - 4759893
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4760126 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 4760027  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4760026 atgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 4759927  T
Q  200 tacaatg-tttttcccaacccaagagacactctc 232  Q
    ||||||| |||||||||||||||||||| |||||    
T  4759926 tacaatgttttttcccaacccaagagactctctc 4759893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 30655692 - 30655927
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  30655692 agagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaaaccctagattctaccctt 30655791  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30655792 tggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 30655891  T
Q  200 tacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||    
T  30655892 tacaatgtttttcccaacccaagagacactctcaac 30655927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 10689194 - 10688959
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10689194 agagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 10689095  T
Q  101 atg-tgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatcct--tccaactaatgaactcctcactacccaaggt 196  Q
    ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  10689094 atgttgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggt 10688995  T
Q  197 gattacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  10688994 gattacaatgtttttcccaacccaagagacactctc 10688959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 36979423 - 36979654
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  36979423 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaaaccctagattctaccctt 36979522  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36979523 tggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 36979622  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||| ||||||||||| |||||||||||||    
T  36979623 tacaatg-ttttcccaacctaagagacactctc 36979654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18870613 - 18870377
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||     
T  18870613 agagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagcttacacaagaacaaaccctagattctaccct 18870514  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  || |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18870513 ttggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 18870414  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  18870413 ttacaatgtttttcccaacccaagagacactctcaac 18870377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18853219 - 18852983
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||     
T  18853219 agagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaacaatagcattcaagcttacacaagaacaaaccctagattttaccct 18853120  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  || |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18853119 ttggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 18853020  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18853019 ttacaatatttttcccaacccaagagacactctcaac 18852983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6311343 - 6311579
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||| |||||||| ||| |||||||||||||||     
T  6311343 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaaga-caaaccctagattctaccct 6311440  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa---gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggt 196  Q
    |  |||||||||||||||||||| ||||||||||||   |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  6311441 ttggtgtttccccactctcacaagatgaaccctaaaaaagagaagtcactagaggaagcttttgatccttccaactaatgaactcctcactacccaaggt 6311540  T
Q  197 gattacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6311541 gattacaatgtttttcccaacccaagagacactctcaac 6311579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 1262005 - 1261776
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||||||||||||||||    
T  1262005 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagtacaagacctagattctacccat 1261907  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  |||| | ||||||||||||||||||    
T  1261906 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgat 1261809  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||| |||||    
T  1261808 tacaatgtttttcccaacccaagagaccctctc 1261776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 31071280 - 31071058
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  31071280 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 31071182  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| | |||||||||||| |  |||| | |||||||||||||||| |    
T  31071181 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 31071084  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  31071083 tacaatgtttttcccaacccaagaga 31071058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26287947 - 26288158
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  26287947 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 26288035  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  26288036 ttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 26288132  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||||| |||||||    
T  26288133 tacaatgtttttcccaactcaagaga 26288158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26301204 - 26301415
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  26301204 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 26301292  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  26301293 ttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 26301389  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||||| |||||||    
T  26301390 tacaatgtttttcccaactcaagaga 26301415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26313198 - 26313409
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  26313198 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 26313286  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  26313287 ttgtg-ttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 26313383  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||||| |||||||    
T  26313384 tacaatgtttttcccaactcaagaga 26313409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 19175805 - 19175587
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||  |||||| |||    
T  19175805 agagcaactctccaatccactatgatgaaagtgttacaaagagttacaagaaa-aatagcctgcaagcttacacaagaacaagacctaacttctacacat 19175707  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| ||||||||| |||||||| ||| | ||||| | || ||||||||||| || |||| | |||||||||||||||| |    
T  19175706 ttgtgttt-cccactctctcaatgatgaaccct-aagagaagacacaaaaggaaacttttgatccttccaa-tagtgaaat-ctcactacccaaggtgtt 19175611  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||| ||||||||    
T  19175610 tacaatg--tttcccaatccaagaga 19175587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 4456074 - 4456292
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||   |||||||||||||||||||| | ||  ||||||||||    
T  4456074 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagctggcaagcttacacaagaacaagacataatttctacccat 4456171  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || ||||||||| |||| |||||||||||||||||| ||| | ||||||| || |||||||| || |  |||| | |||||||||||||||| |    
T  4456172 ttgtg-ttacccactctctcaatgatgaaccctaaagagaagacacaaaaggaagcttttgatccttctaa-tggtgaaat-ctcactacccaaggtgtt 4456268  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  4456269 tacaatg--tttcccaacccaagaga 4456292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 7412387 - 7412604
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||| | | |||||||||||||||||||| ||||  ||||||||||    
T  7412387 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aataacttgcaagcttacacaagaacaagacctaatttctacccat 7412484  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| ||||||||| |||||||| ||  | ||||||| || ||||||| ||| |  |||| | |||||||||||||||| |    
T  7412485 ttgtgttt-cccactctctcaataatgaaccct-aagagaagacataaaaggaagcttttgatcctttcaa-tggtgaaat-ctcactacccaaggtgtt 7412580  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  7412581 tacaatg--tttcccaacccaagaga 7412604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7289965 - 7289832
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| ||||| |||||||||     
T  7289965 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctatattctaccct 7289868  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  |||||||||||||||||||||||||||||||||    
T  7289867 ttggtgtttccccactctcacaatatgaaccctaaa 7289832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25328317 - 25328185
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  25328317 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 25328221  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  |||||||||||||||||||| ||||||||||||    
T  25328220 ttggtgtttccccactctcacaacatgaaccctaaa 25328185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 19752445 - 19752347
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| || |||||||||||||||| | ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  19752445 agagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctaatttctacccat 19752347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23799628 - 23799496
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||||||||| |||| ||||||||||  | |||| | |||||||||||||||||||| ||||  |||||||||    
T  23799628 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttacacaagaacaagacctaatttctaccca 23799531  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaa 134  Q
    | | ||| || |||||| |||||||||||| |||||    
T  23799530 t-tttgtgtcacccactgtcacaatatgaatcctaa 23799496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 7289831 - 7289784
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289831 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 7289784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 25328058 - 25328013
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25328058 acccaaggtgattacaatgtttttcccaacccaagagacactctca 25328013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 25328184 - 25328139
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25328184 acccaaggtgattacaatgtttttcccaacccaagagacactctca 25328139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6127267 - 6127365
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||| |  ||||||||| ||||||||| ||||  |||||||||    
T  6127267 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttataagcttacaaaagaacaagacctaatttctaccca 6127364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 26403281 - 26403076
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||| | |||  | |||| | ||||||| |||||||||||| ||||  |||||||||    
T  26403281 agagcagctctccaatccactatgatgaaagtgttacaaaagagttataggaa--attagcttacaagcttgcacaagaacaagacctaatttctaccca 26403184  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    | | ||| || | ||||||||||||||||| | | |||||||  ||| | |||||||  || ||||||||||| |  |||| | ||||||||||||||||    
T  26403183 t-tttgtgtcactcactctcacaatatgaatcat-aagagaaaacacaaaaggaagctttttgatccttccaa-tggtgaaat-ctcactacccaaggtg 26403088  T
Q  198 attacaatgttt 209  Q
     |||||||||||    
T  26403087 tttacaatgttt 26403076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 39784728 - 39784684
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  39784728 cccaaggtgattacaatgtttttcccaacctaagagactctctca 39784684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6813729 - 6813782
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 53  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||||||||||    
T  6813729 agagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaa 6813782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39784861 - 39784813
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  39784861 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 39784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9054888 - 9054835
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaag-ggttacaagaaa 53  Q
    |||||||||||| |||||| || |||||||||| ||||||| ||||||||||||    
T  9054888 agagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaa 9054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 4696482 - 4696441
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  4696482 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 4696441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 9054294 - 9054253
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||||||| ||||||||  |||||||||||||    
T  9054294 ctcactacccaaggtgattataatgtttt--ccaacccaagaga 9054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10684303 - 10684252
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  10684303 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 10684252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35745437 - 35745488
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  35745437 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 35745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 20357598 - 20357363
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  20357598 agagcagctctccaatccaatatga-gaaagtgttacaaagggttacaagaaacaatagccttcaagctttacacaagaacatgccctagattctaccca 20357500  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20357499 tatgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 20357400  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  20357399 ttacaatgtttttcccaacccaagagacactctcaac 20357363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 2058011 - 2058246
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2058011 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcattcaagcttacacaagaacaagccctagattctacccat 2058110  T
Q  101 atg-tgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatcct--tccaactaatgaactcctcactacccaaggt 196  Q
    ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  2058111 atgttgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatcctcccccaactaatgaactcctcactacccaaggt 2058210  T
Q  197 gattacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  2058211 gattacaatgtttttcccaacccaagagacactctc 2058246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 1533495 - 1533263
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaag-aacaagccctagattctaccca 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||     
T  1533495 agagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagcttacacaagaaacaagacctagattctaccct 1533396  T
Q  100 tatgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||    
T  1533395 ttggtgttttcccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaactcctcactacccaaggtga 1533297  T
Q  199 ttacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||||||||||    
T  1533296 ttacaatgtttttcccaacccaagagacactctc 1533263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21639854 - 21640076
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  21639854 agagcagctctccaatccactataatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 21639952  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  21639953 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 21640050  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  21640051 tacaatgtttttcccaacccaagaga 21640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21646052 - 21646274
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  21646052 agagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 21646150  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| |  |||| | |||||||||||||||| |    
T  21646151 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagatttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 21646248  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  21646249 tacaatgtttttcccaacccaagaga 21646274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18413685 - 18413906
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||| ||||| ||||||||||    
T  18413685 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagattgcaagcttacacaagaacaagtcctagtttctacccat 18413783  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatt 200  Q
     ||||||||||||||||||||||||||||||||||  |||| ||| ||||||||| | |||||||||||| |  |||| | |||||||||||||||| ||    
T  18413784 ttgtgtttccccactctcacaatatgaaccctaaaaggaagacacaagaggaagcttaagatccttccaa-tggtgaaat-ctcactacccaaggtgttt 18413881  T
Q  201 acaatgtttttcccaacccaagaga 225  Q
    ||| |||||||||||||||||||||    
T  18413882 acattgtttttcccaacccaagaga 18413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18408809 - 18409030
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||||||| ||||| ||||||||||    
T  18408809 agagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaaa-aataacttgcaagcttacacaagaacaagtcctagtttctacccat 18408907  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatt 200  Q
     ||||||||||||||||||||||||||||||||||  |||| ||| ||||||||| | ||||||||  || |  |||| | |||||||||||||||| ||    
T  18408908 ttgtgtttccccactctcacaatatgaaccctaaaaggaagacacaagaggaagcttaagatccttttaa-tggtgaaat-ctcactacccaaggtgttt 18409005  T
Q  201 acaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||||||||||||    
T  18409006 acaatgtttttcccaacccaagaga 18409030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2479382 - 2479600
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||| |||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  2479382 agagcagctctcaaatccactatgatgaaagtgttacaaagagttataagaa--aatagcttgcaagcttacacaagaacaagacctaatttctacccat 2479479  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| ||||||||||||||||||  |  | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  2479480 gtgtgttt-cccactctctcaataatgaaccctaaagagaagatataaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 2479576  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  2479577 tacaatg--tttcccaacccaagaga 2479600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21983330 - 21983536
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac--aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccc 98  Q
    ||||||||||||||||||| |||||||||||||||||  |||| ||||||||||  |||||| | |||||||||||||||||||| ||||| ||||||||    
T  21983330 agagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacctagtttctaccc 21983427  T
Q  99 atatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    || | ||| || |||||||||| ||||||||||||||||||||  ||| | ||||||| |  ||||||||||| |  |||| | ||||||||||||||||    
T  21983428 at-tttgtgtcacccactctcaaaatatgaaccctaaagagaaaacacaaaaggaagcttatgatccttccaa-tggtgaaat-ctcactacccaaggtg 21983524  T
Q  198 attacaatgttt 209  Q
     |||||||||||    
T  21983525 tttacaatgttt 21983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 44848735 - 44848568
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  || ||| | |||||||||||||||| ||| ||||  ||||||||||    
T  44848735 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aaaagcttgcaagcttacacaagaataagacctaatttctacccat 44848638  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaa 170  Q
     ||||||| ||||||||| |||| |||||| ||||||||||| ||| | ||||||| || |||||||||||    
T  44848637 ttgtgttt-cccactctctcaataatgaactctaaagagaagacacaaaaggaagcttttgatccttccaa 44848568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 12406382 - 12406510
Alignment:
Q  6 agctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctacccatatgt 104  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| ||||||||||||||| |  ||    
T  12406382 agctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccctttggt 12406479  T
Q  105 gtttccccactctcacaatatgaaccctaaa 135  Q
    |||||||||||||||||||||||||||||||    
T  12406480 gtttccccactctcacaatatgaaccctaaa 12406510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29159849 - 29160055
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||| | |||||||||||||||||||| ||||  |||||||||    
T  29159849 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttacacaagaacaagacctaatttctaccca 29159946  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    | | ||| || ||||||||||||||||||| ||| |||||||  ||| | |||||||  || ||||||||||| |  |||| | ||||||||||||||||    
T  29159947 tttttgtgtcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaagctttttgatccttccaa-tgttgaaat-ctcactacccaaggtg 29160043  T
Q  198 attacaatgttt 209  Q
     |||||||||||    
T  29160044 tttacaatgttt 29160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 12396961 - 12397090
Alignment:
Q  5 cagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctacccatatg 103  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||| || ||| ||||| |||||| ||||||||||||||| |  |    
T  12396961 cagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagcctttaatctttacacatgaacaaaccctagattctaccctttgg 12397058  T
Q  104 tgtttccccactctcacaatatgaaccctaaa 135  Q
    |||||||||||| |||||||||||||||||||    
T  12397059 tgtttccccactatcacaatatgaaccctaaa 12397090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2580436 - 2580533
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| || |||||||||||||||| | ||||||||||  |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  2580436 agagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaa--aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 2580533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24024365 - 24024233
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  24024365 agagcagctctccaatccaatatga-gaaagtgttacaaaatgttacaagactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 24024269  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| ||||||||||||  ||||||||||||    
T  24024268 ttggtattttcccactctcacacgatgaaccctaaa 24024233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31109622 - 31109490
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| || |||| |||||| |||||||||||||||     
T  31109622 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttgcacatgaacaaaccctagattctaccct 31109526  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |   | ||| |||||||||||| |||||||||||||    
T  31109525 ttgatattttcccactctcacactatgaaccctaaa 31109490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9190059 - 9189961
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| || |||||||||||||||| | ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  9190059 agagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctaatttctacccat 9189961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21988952 - 21989172
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac--aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccc 98  Q
    |||||| |||||||||||| | |||||||||||||||  |||| ||||||||||  |||||  | |||||||| ||||||| ||  ||||| ||||||||    
T  21988952 agagcaactctccaatccactttgatgaaagtgttacaaaaagagttacaagaa--aatagattgcaagcttatacaagaataaaacctagtttctaccc 21989049  T
Q  99 atatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    || | ||| || |||||||| | ||||||||||||||||||||  || || ||||||| |  ||||||||||| |  | || | ||||||||||||||||    
T  21989050 at-tttgtgtcacccactctaaaaatatgaaccctaaagagaaaacaataaaggaagcttatgatccttccaa-tggtaaaat-ctcactacccaaggtg 21989146  T
Q  198 attacaatgtttttcccaacccaagaga 225  Q
     ||||||||  |||||||||||||||||    
T  21989147 tttacaatg--tttcccaacccaagaga 21989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 47263764 - 47263930
Alignment:
Q  55 aatagccttcaagcttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaa 153  Q
    |||||| | |||||||||||||||||||| ||||  ||||| |||| ||||||| ||||||||| |||| |||||||||||| ||||| ||| | |||||    
T  47263764 aatagcttgcaagcttacacaagaacaagacctaatttctatccatttgtgttt-cccactctctcaataatgaaccctaaatagaagacacaaaaggaa 47263862  T
Q  154 gccttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    || || ||||||||||| |  |||| | |||||||||||||||  ||||||||  |||||||||| ||||||    
T  47263863 gcttttgatccttccaa-tggtgaaat-ctcactacccaaggtatttacaatg--tttcccaaccgaagaga 47263930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 12397091 - 12397138
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397091 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 12397138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 31109489 - 31109442
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109489 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 31109442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4873310 - 4873355
Alignment:
Q  190 ccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaac 4873355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12406513 - 12406558
Alignment:
Q  190 ccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12406513 ccaaggtgattacaatgtttttcccaacccaagagacactctcaac 12406558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 55993 - 56091
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  55993 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 56090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2647747 - 2647649
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  2647747 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 2647650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 24024232 - 24024185
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24024232 acccacggtgattacaatgtttttccaaacccaagagacactctcaac 24024185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19992359 - 19992408
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  19992359 agagcagctctccaatccaatatg-tgaaagtgttacaaaaggttacaaga 19992408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 46516361 - 46516263
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| | ||  |||||||||    
T  46516361 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttaaaagcttacacaagaacaagacataatttctaccca 46516264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 49091707 - 49091805
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||| |||||||||||| ||||||||||||||||| |||| ||||||||||  | || | |  ||||||||||||||||||| ||||  |||||||||    
T  49091707 agagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attaccttataagcttacacaagaacaagacctaatttctaccca 49091804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20284135 - 20284230
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccc 98  Q
    |||||||| |||||||||| || |||||||||||||||| | ||||||||||  | |||| |  ||||||||| ||||||||| ||||  ||||||||    
T  20284135 agagcagccctccaatccactaagatgaaagtgttacaatgcgttacaagaa--attagcttataagcttacaaaagaacaagtcctaatttctaccc 20284230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4866776 - 4866820
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggtta 46  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  4866776 agagcagctctccaatccaatatga-gaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16880119 - 16880169
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  16880119 agagcagctctccaatccaatatg-tgaatgttttacaaagagttacaagaa 16880169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16884975 - 16885025
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  16884975 agagcagctctccaatccaatatg-tgaatgttttacaaagagttacaagaa 16885025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 47263722 - 47263757
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgtta 36  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47263722 agagcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 9185189 - 9185128
Alignment:
Q  38 aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||| ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  9185189 aaagtgttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctaatttctacccat 9185128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5817321 - 5817268
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 53  Q
    ||||||||||||||||||| ||  ||||||||| |||||| |||||||||||||    
T  5817321 agagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaa 5817268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 21812143 - 21812098
Alignment:
Q  189 cccaaggtgattacaatgttttt-cccaacccaagagacactctca 233  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||    
T  21812143 cccaaggtgattacaatgtttttccccaacctaagaaacactctca 21812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28617276 - 28617223
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaa-agggttacaagaaa 53  Q
    ||||||||||||||||||| || |||||||||| |||||  |||||||||||||    
T  28617276 agagcagctctccaatccactaagatgaaagtgatacaatggggttacaagaaa 28617223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33332501 - 33332448
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||| |||||||||| || |||||||||||||| |||| |||||||||||    
T  33332501 agagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaaa 33332448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 2580613 - 2580654
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||||||  |||||||||||||    
T  2580613 ctcactacccaaggtgtttacaatgtttt--ccaacccaagaga 2580654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 4796542 - 4796501
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||||||  |||||||||||||    
T  4796542 ctcactacccaaggtgtttacaatgtttt--ccaacccaagaga 4796501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 9185048 - 9185007
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  9185048 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 9185007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 20284312 - 20284353
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  20284312 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 20284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 23402887 - 23402846
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  23402887 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 23402846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24261362 - 24261311
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  24261362 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 24261311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24266241 - 24266190
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  24266241 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 24266190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 24741986 - 24742218
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  24741986 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaaaccctagattctaccctt 24742085  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24742086 tggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 24742185  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||    
T  24742186 tacaatgtttttcccaacccaagagacactctc 24742218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 29760687 - 29760919
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaag-aacaagccctagattctaccca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||     
T  29760687 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcctgcaagcttacacaagaaacaagacctagattctaccct 29760786  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |  ||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29760787 ttggtgtttccccactctcacactatgaaccct-aagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 29760885  T
Q  200 tacaatg-tttttcccaacccaagagacactctc 232  Q
    ||||||| ||||||||||||||||||||||||||    
T  29760886 tacaatgttttttcccaacccaagagacactctc 29760919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28468580 - 28468367
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||  | ||||||||||||| |||||| ||||||||||||||||    
T  28468580 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaaaaatagtttgcaagcttacacaataacaagacctagattctacccat 28468491  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  28468490 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 28468393  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||| |||||||||||||||||||    
T  28468392 tacaatatttttcccaacccaagaga 28468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 31985685 - 31985466
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  31985685 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctaatttctacccat 31985587  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| |||||||||||||| |||||||| ||||||||| ||| | ||||||| || ||||||||| | |  |||| |  ||||||||||||||| |    
T  31985586 ttgtgttt-cccactctcacaatgtgaaccctaaaagagaagacacaaaaggaagcttttgatccttccca-tggtgaaat-ttcactacccaaggtgtt 31985490  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  31985489 tacaatg--tttcccaacccaagaga 31985466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5396722 - 5396504
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  5396722 agagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacctaatttctacccat 5396625  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || | ||||||| |||| |||||||||||||||||| ||| | || |||| || ||| ||||||| |  |||| | |||||||||||||||| |    
T  5396624 ttgtg-ttactcactctctcaatgatgaaccctaaagagaagacacaaaagaaagcttttgattcttccaa-tggtgaaat-ctcactacccaaggtgtt 5396528  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  5396527 tacaatg--tttcccaacccaagaga 5396504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 51520503 - 51520636
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  51520503 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 51520600  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  51520601 ttggtgtttccccactctcttaatatgaaccctaaa 51520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9224446 - 9224313
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |  |||||||||||||| ||||| |||||| ||||||| |||||||     
T  9224446 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttagaagaa-ctctagccttcaagctttacacatgaacaaaccctagactctaccct 9224349  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||||| |||||||||||||    
T  9224348 ttggtgtttccccactctcacactatgaaccctaaa 9224313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9229233 - 9229100
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |  |||||||||||||| ||||| |||||| ||||||| |||||||     
T  9229233 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttagaagaa-ctctagccttcaagctttacacatgaacaaaccctagactctaccct 9229136  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||||| |||||||||||||    
T  9229135 ttggtgtttccccactctcacactatgaaccctaaa 9229100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45347856 - 45347723
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  45347856 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagac-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 45347759  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  45347758 ttggtattttcccactctcacactatgaaccctaaa 45347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 16623344 - 16623126
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | ||||    ||||||||| ||||||||| ||||  |||||||||    
T  16623344 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagctaataagcttacagaagaacaagacctaatttctaccca 16623247  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    | | ||| || ||||||||||||||||||| |||||| ||||  ||| | ||||||| || ||||||||||| |  |||| | ||||||||||||||||     
T  16623246 t-tttgtgtcacccactctcacaatatgaatcctaaa-agaaaacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgt 16623151  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  16623150 ttacaatg--tttcccaacccaagaga 16623126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45357335 - 45357203
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| ||||||||| ||||| |||||| |||||||||||||||     
T  45357335 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagctttacacatgaacaaaccctagattctaccct 45357239  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  45357238 ttggtattttcccactctcacactatgaaccctaaa 45357203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 5147724 - 5147891
Alignment:
Q  2 gagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||| |||| ||||||||||||||||| |||  ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  5147724 gagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaa--aatagcttgcaagcttacacaagaacaaggcctaatttctacccat 5147821  T
Q  101 atgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaa 170  Q
     | ||| || |||| ||||||||||||||||||||||||||  ||| | ||||||| |  |||||||||||    
T  5147822 -tttgtgtcacccattctcacaatatgaaccctaaagagaaaacacaaaaggaagcttatgatccttccaa 5147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3777595 - 3777813
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | ||| ||||||||||||||||  |||  ||||||||||    
T  3777595 agagtagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaaacttacacaagaacaagatctaatttctacccat 3777692  T
Q  101 atgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
     | ||| || ||||||||||||||||||| ||| |||||||   || | |||||||  || |||| |||||| |  |||| | ||||||||||||||||     
T  3777693 -tttgtgtcacccactctcacaatatgaatcct-aagagaaaatacaaaaggaagctttttgatcattccaa-tggtgaaat-ctcactacccaaggtgt 3777788  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  3777789 ttacaatg--tttcccaacccaagaga 3777813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3814070 - 3814201
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||  ||  |||| ||||||| ||||||| |||||| ||||||| |||||||     
T  3814070 agagcagctctccaatccaatatg-tgaaagtgttacaaaaggttacaag--actctagctttcaagctttacacatgaacaaaccctaga-tctaccct 3814165  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  3814166 ttggtattttcccactctcacactatgaaccctaaa 3814201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 36315280 - 36315163
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||   |||| |  |||||||||||||| |||| ||||  ||||||||||    
T  36315280 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaat--tagcttagaagcttacacaagagcaagacctaatttctacccat 36315183  T
Q  101 atgtgtttccc-cactctca 119  Q
     |||||| ||| ||||||||    
T  36315182 ttgtgttacccacactctca 36315163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 36329489 - 36329372
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||   |||| |  |||||||||||||| |||| ||||  ||||||||||    
T  36329489 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaat--tagcttagaagcttacacaagagcaagacctaatttctacccat 36329392  T
Q  101 atgtgtttccc-cactctca 119  Q
     |||||| ||| ||||||||    
T  36329391 ttgtgttacccacactctca 36329372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 51520637 - 51520684
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520637 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 51520684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5732711 - 5732839
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| ||||||| ||||||| |||||| ||||||| |||||||     
T  5732711 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagctttcaagctttacacatgaacaaaccctaga-tctaccct 5732806  T
Q  100 tatgtgtttccccactctcacaatatgaaccct 132  Q
    |  || ||| |||||||||||| ||| ||||||    
T  5732807 ttggtattttcccactctcacactataaaccct 5732839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5143305 - 5143473
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||| ||| ||||||||||||||||| |||   |||||||||  |||||| | ||||| |||||||||||||| ||||  |||||| ||    
T  5143305 agagcagctctccaacccactatgatgaaagtgttacaaaaaatttacaagaa--aatagcttgcaagcatacacaagaacaagacctaatttctactca 5143402  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaa 170  Q
    | | ||| ||  ||||||||| ||||||||||||||||||||  ||| | ||||||| |  |||||||||||    
T  5143403 t-tttgtgtcagccactctcagaatatgaaccctaaagagaaaacacaaaaggaagcttatgatccttccaa 5143473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 56146750 - 56146664
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagcccta 88  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||  |||||||||||| ||||||| |||||| |||||    
T  56146750 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 18712671 - 18712624
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18712671 acccaaggtgataacaatgtttttcccaacccaagagacactctcaac 18712624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 225
Target Start/End: Complemental strand, 8689509 - 8689329
Alignment:
Q  38 aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaat-atgaaccctaaag 136  Q
    |||| |||||||||||  ||||| | |||||||||||||||||||| ||||  ||||||| || ||||||| ||||||||| |||| ||||||||| |||    
T  8689509 aaagtgttacaagaaa--atagcttgcaagcttacacaagaacaagacctaatttctaccaatttgtgttt-cccactctctcaatgatgaaccct-aag 8689414  T
Q  137 agaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    ||||| ||| | ||||| | || ||||||||||| |  |||| | ||||||| |||||||| ||| ||||  |||||||||||||||||    
T  8689413 agaagacacaaaaggaaacttttgatccttccaa-tggtgaaat-ctcactatccaaggtgtttaaaatg--tttcccaacccaagaga 8689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10047425 - 10047523
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  10047425 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 10047522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 45347721 - 45347677
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  45347721 cccaaggtgattacaatgtttttcccaacctaagagacactctca 45347677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 9224312 - 9224265
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  9224312 acccaaggtgattacaatgttttcccaaacccaagagacactctcaac 9224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 9229099 - 9229052
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  9229099 acccaaggtgattacaatgttttcccaaacccaagagacactctcaac 9229052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3796570 - 3796472
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||| ||||| |||||| ||||||||||||||||| |||| ||||||||||  | |||| | ||||||| |||||||||||| ||||  |||||||||    
T  3796570 agagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttgcacaagaacaagacctaatttctaccca 3796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 3814202 - 3814247
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||    
T  3814202 acccaaggtgattacaatgtttttcccaacctaagaaacactctca 3814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 5732844 - 5732888
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  5732844 cccaaggtgattacaatgtttttcccaacctaagaaacactctca 5732888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 16628815 - 16628705
Alignment:
Q  110 cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgattacaatgttt 209  Q
    ||||||||||||||||||| |||||| ||||  ||| | ||||||| || ||||||||||| |  |||| || ||||||||||||||| ||||||||  |    
T  16628815 cccactctcacaatatgaatcctaaa-agaaaacacaaaaggaagcttttgatccttccaa-tggtgaaatc-tcactacccaaggtgtttacaatg--t 16628721  T
Q  210 ttcccaacccaagaga 225  Q
    ||||||||||||||||    
T  16628720 ttcccaacccaagaga 16628705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 16630727 - 16630650
Alignment:
Q  5 cagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaag 83  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||   |||| |  |||||||||||||||||||    
T  16630727 cagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaag 16630650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38152490 - 38152395
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacc 97  Q
    ||||||||||||||||||| |||| ||||||||||||||| | |||| ||||||   |||| |  ||||||||||||||||||| ||||  |||||||    
T  38152490 agagcagctctccaatccactatggtgaaagtgttacaaaagagttataagaaat--tagcttataagcttacacaagaacaagacctaatttctacc 38152395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5112283 - 5112336
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 53  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||||||||||||    
T  5112283 agagcagctctccaatccactaatatgaaagtgttacaaatgggttacaagaaa 5112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39246040 - 39246093
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  39246040 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 39246093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18855906 - 18855950
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  18855906 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 18855950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 45357201 - 45357157
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  45357201 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 45357157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6743466 - 6743427
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa 40  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  6743466 agagcagccctccaatccactatgatgaaagtgttacaaa 6743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24333855 - 24333894
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa 40  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  24333855 agagcagctctccaatccactatgatgaacgtgttacaaa 24333894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5269242 - 5269204
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaa 39  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  5269242 agagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18855773 - 18855821
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  18855773 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 18855821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 5112460 - 5112501
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  5112460 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 5112501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 10047604 - 10047645
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  10047604 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 10047645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 2671637 - 2671405
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||    
T  2671637 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagattgcaagcttacacaagaccaagccctagattctacccat 2671538  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2671537 atgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 2671438  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||    
T  2671437 tacaatgtttttcccaacccaagagacactctc 2671405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 8739114 - 8738882
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8739114 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaatccctagattctacccat 8739015  T
Q  101 atgtgtttccccactctcacaatatgaacccta-aagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  8739014 atgtatttccccactctcacaatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgat 8738915  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||| ||||||    
T  8738914 tacaatgtttttcccaacccaagagatactctc 8738882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 9091352 - 9091120
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9091352 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaatccctagattctacccat 9091253  T
Q  101 atgtgtttccccactctcacaatatgaacccta-aagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  9091252 atgtatttccccactctcacaatatgaaccctagaagagaagacactagaggaagctttagatcctttcaactaatgaactcctcactacccaaggtgat 9091153  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||| ||||||    
T  9091152 tacaatgtttttcccaacccaagagatactctc 9091120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 40372846 - 40372615
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  40372846 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagccctagattctacccat 40372748  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40372747 atgtgtttccccactctcataatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 40372648  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||    
T  40372647 tacaatgtttttcccaacccaagagacactctc 40372615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7167290 - 7167526
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  7167290 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaaaccctagattctaccctt 7167389  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      || ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7167390 tggtatttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtgat 7167489  T
Q  200 tacaatg-tttttcccaacccaagagacactctcaac 235  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7167490 tacaatgttttttcccaacccaagagacactctcaac 7167526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 8477408 - 8477642
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaa-caagccctagattctaccca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || |||| ||||||||||||||     
T  8477408 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagcttacacaataaacaagacctagattctaccct 8477507  T
Q  100 tatgtgtttcccc-actctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    |  |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8477508 ttggtgtttcccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtg 8477607  T
Q  198 attacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||||    
T  8477608 attacaatgtttttcccaacccaagagacactctc 8477642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28501748 - 28501513
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||| ||||||||| || |||||||||||||||     
T  28501748 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccct 28501650  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28501649 ttggtgtttccccactctcacaatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 28501550  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  28501549 ttacaatgtttttcccaacccaagagacactctcaac 28501513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28503915 - 28503680
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||| ||||||||| || |||||||||||||||     
T  28503915 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccct 28503817  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28503816 ttggtgtttccccactctcacaatatgaaccctaaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 28503717  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28503716 ttacaatatttttcccaacccaagagacactctcaac 28503680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26928642 - 26928421
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  26928642 agagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaaaaatagcttgcaagcttacacaagaacaagacctagattctacccat 26928543  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| || ||||||||||| |  |||| | |||| ||||||||||| |    
T  26928542 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaa-tggtgaaat-ctcattacccaaggtgtt 26928445  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  26928444 tacaatg--tttcccaacccaagaga 26928421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32143367 - 32143587
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  32143367 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 32143465  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  32143466 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 32143563  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||  |||||||||||||    
T  32143564 tacaatgtttt--ccaacccaagaga 32143587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 1305996 - 1306216
Alignment:
Q  3 agcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatat 102  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||| | ||| |||||||||| |    
T  1305996 agcagctctccaatccactacgatgaaagtgttacaaagggttacaagaaa-aatagtttgcaagcttacacaagaacaagtcatagtttctacccattt 1306094  T
Q  103 gtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatta 201  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| | |||||||||||| |  |||| | |||||||||||||||| |||    
T  1306095 gtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagcttaagatccttccaa-tggtgaaat-ctcactacccaaggtgttta 1306192  T
Q  202 caatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||    
T  1306193 caatgtttttcccaacccaagaga 1306216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27453004 - 27453224
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||  ||||  ||||||||||    
T  27453004 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaattcctattttctacccat 27453102  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  27453103 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 27453200  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  ||| |||||||||||||    
T  27453201 tacaatg--tttgccaacccaagaga 27453224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 27974993 - 27974774
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  27974993 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa-aatagcttgcaagcttacacaagaacaagacctaatttctacccat 27974895  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| |||| |||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  27974894 ttgtgttt-cccattctctcaataatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 27974798  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||| ||||||||||    
T  27974797 tacaatg--tttcccgacccaagaga 27974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 16264396 - 16264613
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | ||||||| |||||||||||| ||||  |||||| |||    
T  16264396 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttccacaagaacaagacctaatttctacacat 16264493  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || ||||||||| |||| ||||||||| |||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  16264494 ttgtg-ttacccactctctcaatgatgaaccct-aagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 16264589  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  16264590 tacaatg--tttcccaacccaagaga 16264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 6794754 - 6794623
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||  ||||||||||    
T  6794754 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa-attagcttgcaagcttacacaagaacaagtcctaatttctacccat 6794656  T
Q  101 atgtgtttccccactctcacaatatgaaccctaa 134  Q
     |||| |  |||||||||||||||||||||||||    
T  6794655 ttgtg-tcacccactctcacaatatgaaccctaa 6794623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22173234 - 22173101
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  22173234 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 22173137  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  22173136 ttggtgtttccccactctcctaatatgaaccctaaa 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 8370527 - 8370311
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||   |||| |  ||||||||||||||||||| | ||  ||||||||||    
T  8370527 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaat--tagcttaaaagcttacacaagaacaagacataatttctacccat 8370430  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatt 200  Q
     |||| |  ||||||||||||||||||| ||| |||||||  ||| | ||||| | || ||||||||||| |  |||| | ||||||||||||| || ||    
T  8370429 ttgtg-tcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaaacttttgatccttccaa-tggtgaaat-ctcactacccaagatgttt 8370334  T
Q  201 acaatgtttttcccaacccaagaga 225  Q
    ||||||  |||||||||||||||||    
T  8370333 acaatg--tttcccaacccaagaga 8370311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 27986487 - 27986278
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| || ||| | |||||||||||||||||||| ||||  ||||||||||    
T  27986487 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaaaaa-agcttgcaagcttacacaagaacaagacctaatttctacccat 27986399  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||||| |||||| ||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  27986398 ttgtgttt-cccactctctcaatatcaaccctaaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 27986302  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  27986301 tacaatg--tttcccaacccaagaga 27986278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 36029141 - 36029357
Alignment:
Q  3 agcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccata 101  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||| | ||| |||||||||||||||| ||||  ||||||||||     
T  36029141 agcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaaacttacacaagaacaagacctaatttctacccat- 36029237  T
Q  102 tgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgatt 200  Q
    | ||| || | |||||||| |||||||| ||| |||||||  ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| ||    
T  36029238 tttgtgtcactcactctcaaaatatgaatcct-aagagaaaacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgttt 36029334  T
Q  201 acaatgtttttcccaacccaagaga 225  Q
    ||||||  |||||||||||||||||    
T  36029335 acaatg--tttcccaacccaagaga 36029357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 33386707 - 33386497
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||  | |||||||||||||||||||| ||||  ||||||||||    
T  33386707 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagtttgcaagcttacacaagaacaagtcctaatttctacccat 33386619  T
Q  101 atgtgtttccccactctcacaat-atgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
     ||||||| ||||||||| |||| ||||||||| ||||||||| ||| | ||||||| || ||||||||||| |  |||| | ||||||||||||||||     
T  33386618 ttgtgttt-cccactctctcaataatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgt 33386522  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||| ||||||||||||    
T  33386521 ttacaatg--tttctcaacccaagaga 33386497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21711269 - 21711486
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||||||||   |||| |  |||||||||||||| |||| ||||  ||||||||||    
T  21711269 agagcagctctcaaatccactatgatgaaagtgttacaaagagttacaagaaat--tagcttaaaagcttacacaagagcaagacctaatttctacccat 21711366  T
Q  101 atgtgtttccc-cactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||||| ||| |||||||| |  ||||| ||| |||||||  ||| | ||||||| || ||||||||||| |  |||| | |||||||| ||||||| |    
T  21711367 ttgtgttacccacactctca-ataatgaatcct-aagagaaaacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactactcaaggtgtt 21711462  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  21711463 tacaatg--tttcccaacccaagaga 21711486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 35925529 - 35925738
Alignment:
Q  4 gcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccatatg 103  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||  | |||  |  |||||||||| |||||||  ||||  |||||||||| ||    
T  35925529 gcagttctccaatccactatgatgaaagtgttacaaagagttacaagaa--attagtttataagcttacactagaacaaaacctaatttctacccatttg 35925626  T
Q  104 tgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgattaca 203  Q
    || |  ||||||||||||||||||| ||| |||||||  ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |||||    
T  35925627 tg-tcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtttaca 35925722  T
Q  204 atgtttttcccaacccaa 221  Q
    |||  |||||||||||||    
T  35925723 atg--tttcccaacccaa 35925738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40592823 - 40592604
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||| |||||||||||| | ||||||||||||||||| |||| ||||||||||  | |||| | |||||||||||||||||||   |||  |||||||||    
T  40592823 agagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttacacaagaacaaaatctaatttctaccca 40592726  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagc-cttagatccttccaactaatgaactcctcactacccaaggtg 197  Q
    | | ||| || ||||||||||||||||||| ||| |||||||  ||| | |||||||  || ||||||||||| |  |||| | ||||||||||||||||    
T  40592725 t-tttgtgtcacccactctcacaatatgaatcct-aagagaaaacacaaaaggaagctttttgatccttccaa-tggtgaaat-ctcactacccaaggtg 40592630  T
Q  198 attacaatgtttttcccaacccaagaga 225  Q
     ||||||||  |||||||||||||||||    
T  40592629 tttacaatg--tttcccaacccaagaga 40592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 22173100 - 22173053
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173100 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 22173053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18656481 - 18656609
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| ||||||| ||||||| |||||| ||||||| |||||||     
T  18656481 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagcattcaagctttacacatgaacaaaccctaga-tctaccct 18656576  T
Q  100 tatgtgtttccccactctcacaatatgaaccct 132  Q
    |  || ||| |||||||||||| ||| ||||||    
T  18656577 ttggtattttcccactctcacactataaaccct 18656609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18552924 - 18552826
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  18552924 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 18552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48438260 - 48438358
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  48438260 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcatataagcttacacaagaacaagacctaatttctaccca 48438357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3716043 - 3715911
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||| | ||||||||||||||||| |||| ||||||||||  | |||| | ||| |||||||||||||||| | ||  |||||||||    
T  3716043 agagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaaacttacacaagaacaagacttaatttctaccca 3715946  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaa 134  Q
    | | ||| || |||||| |||||||||||| |||||    
T  3715945 t-tttgtgtcacccactttcacaatatgaatcctaa 3715911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1736346 - 1736248
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||||||||| |||| ||||||||||  | || | |  ||||||||||||||||||| ||||  |||||||||    
T  1736346 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attaacttataagcttacacaagaacaagacctaatttctaccca 1736249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40844697 - 40844795
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| ||| |||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||||    
T  40844697 agagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctaccca 40844794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 18656614 - 18656658
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  18656614 cccaaggtgattacaatgtttttcccaacctaagaaacactctca 18656658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4386968 - 4386915
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 53  Q
    |||||||||||||||||||||| ||| |||||| |||||| |||||||||||||    
T  4386968 agagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaa 4386915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25795827 - 25795925
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||| | || |||||||||||||| |||| ||||||||||  | |||| |  ||||||||| ||||||||| ||||  |||||||||    
T  25795827 agagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaa--attagcttataagcttacaaaagaacaagacctaatttctaccca 25795924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 30709831 - 30709733
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||| ||||||||| | |||||||||||   |||| |  |||||||||||||| |||| ||||  |||||||||    
T  30709831 agagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaaat--tagcttataagcttacacaagagcaagacctaatttctaccca 30709734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3328397 - 3328300
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||| || ||||||| || |||||||||||||||| | ||||||||||  | |||| |  ||||||||| ||||||||| ||||  ||||||||||    
T  3328397 agagcagcccttcaatccactaagatgaaagtgttacaatgagttacaagaa--attagcttataagcttacaaaagaacaagtcctaatttctacccat 3328300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 10274605 - 10274646
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaaga 223  Q
    ||||||||||||||||| || ||||| |||||||||||||||    
T  10274605 ctcactacccaaggtgaatataatgtgtttcccaacccaaga 10274646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26299034 - 26299087
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||| |||||||| | ||||||||||||||||| |||| |||||||||||    
T  26299034 agagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaaa 26299087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2672970 - 2672919
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  2672970 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 2672919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2677126 - 2677075
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  2677126 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 2677075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 3323554 - 3323513
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  3323554 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 3323513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 3323727 - 3323679
Alignment:
Q  5 cagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaa 53  Q
    |||| |||||||||| || |||||||||||||||| | |||||||||||    
T  3323727 cagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 3323679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 3328220 - 3328179
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||||||  |||||||||||||    
T  3328220 ctcactacccaaggtgtttacaatgtttt--ccaacccaagaga 3328179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 4386840 - 4386799
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||| ||||||||||||||||  |||||||||||||||||    
T  4386840 ctcactactcaaggtgattacaatg--tttcccaacccaagaga 4386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8512263 - 8512314
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  8512263 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 8512314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8517143 - 8517194
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  8517143 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 8517194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 26299211 - 26299252
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  26299211 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 26299252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37466337 - 37466389
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaa 53  Q
    |||| ||| |||||||||| || |||||||||||||||| | |||||||||||    
T  37466337 agagtagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 37466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 47923767 - 47923726
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  47923767 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 47923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 30631452 - 30631687
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||| || ||||||||||||     
T  30631452 agagcagctctccaatccaatatga-gaaagtgttacaaagggttacaagaaactctagccttcaagctttacacatgaacaaaccatagattctaccct 30631550  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcct-cactacccaaggtga 198  Q
    |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  30631551 ttggtgtttccccactctcacaatatgaaccctaaagagaagtcactagaggaagctttagatccttccaactaatgaactcctccactacccaaggtga 30631650  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  30631651 ttacaatgtttttcccaacccaagagacactctcaac 30631687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 31180260 - 31180494
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||| |||||||||||||||     
T  31180260 agagcagctctccaatccaatatga-gaaagtgttacaaagggttacaagaaactctagccttcaagctttacacaaga-caaaccctagattctaccct 31180357  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  |||||||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31180358 ttggtgtttccccactctcacaatatgaaccataaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactacccaaggtga 31180457  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  31180458 ttacaatgtttttcccaacccaagagacactctcaac 31180494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24135894 - 24136121
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||| |||||| || || |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||||| |    
T  24135894 agagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagattctaccctt 24135992  T
Q  101 atgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
      ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||    
T  24135993 tggtgtttccccactctcacaatgtgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaactcctcactacccaaggtgat 24136091  T
Q  200 tacaatgtttttcccaacccaagagacact 229  Q
    ||||||||||||||||||||||||||||||    
T  24136092 tacaatgtttttcccaacccaagagacact 24136121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 38219444 - 38219666
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  38219444 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 38219542  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  38219543 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 38219640  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  38219641 tacaatgtttttcccaacccaagaga 38219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35387708 - 35387937
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||| ||||| ||||||||||    
T  35387708 agagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaataagtcctagtttctacccat 35387806  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| |  |||| | ||||||||||||||||||    
T  35387807 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagttttagatccttccaa-tggtgaaat-ctcactacccaaggtgat 35387904  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||| |||||||||||||| |||||    
T  35387905 tacaatgttttttccaacccaagagaccctctc 35387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38192219 - 38192369
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  38192219 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 38192317  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagagg 151  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  38192318 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagagg 38192369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 15464578 - 15464798
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  15464578 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa-aatagcttgcaagcttacacaagaacaagacctaatttctacccat 15464676  T
Q  101 atgtgtttccccactctcacaat-atgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
     ||||||| |||||||||||||| ||||||||| ||||||||| ||| | ||||||| || ||||||||||| |  |||| | ||||||||||||||||     
T  15464677 ttgtgttt-cccactctcacaataatgaaccctaaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgt 15464773  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    |||| |||  |||||||||||||||||    
T  15464774 ttacgatg--tttcccaacccaagaga 15464798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9353383 - 9353165
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  || ||| | ||||||||||||||||||||  |||  ||||||||||    
T  9353383 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aaaagcttgcaagcttacacaagaacaagatctaatttctacccat 9353286  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| ||||||| |||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  9353285 ttgtgttt-cccactctctcaataatgaaccttaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 9353189  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  9353188 tacaatg--tttcccaacccaagaga 9353165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 14520276 - 14520494
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  14520276 agagcagctcttcaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacctaatttctacccat 14520373  T
Q  101 atgtgtttccccactctcacaa-tatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || ||||||||| ||| ||||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | ||||||| |||||||| |    
T  14520374 ttgtg-ttacccactctctcaattatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactatccaaggtgtt 14520470  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  14520471 tacaatg--tttcccaacccaagaga 14520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36932401 - 36932181
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| | |||| ||||| ||||||||| | ||  ||||||||||    
T  36932401 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa-aatagcttgcaagtttacataagaacaagacttaatttctacccat 36932303  T
Q  101 atgtgtttccccactctcacaat-atgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
     ||||||| ||||||||| |||| ||||||||| ||| ||||| ||| ||||||||| || ||||||||||| |  |||| | ||||||||||||||||     
T  36932302 ttgtgttt-cccactctctcaataatgaaccctaaaacagaagacacaagaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgt 36932206  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  36932205 ttacaatg--tttcccaacccaagaga 36932181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1457201 - 1457068
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  1457201 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 1457104  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  |||||||||||||||||||||||||||||||||    
T  1457103 ttggtgtttccccactctcacaatatgaaccctaaa 1457068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27445016 - 27445149
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  27445016 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 27445113  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  27445114 ttggtgtttccccactctcttaatatgaaccctaaa 27445149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27449860 - 27449993
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  27449860 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 27449957  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  27449958 ttggtgtttccccactctcttaatatgaaccctaaa 27449993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43592325 - 43592458
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  43592325 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 43592422  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  43592423 ttggtgtttccccactctcttaatatgaaccctaaa 43592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43598770 - 43598903
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  43598770 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 43598867  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  43598868 ttggtgtttccccactctcttaatatgaaccctaaa 43598903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43604262 - 43604395
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  43604262 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 43604359  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  43604360 ttggtgtttccccactctcttaatatgaaccctaaa 43604395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43609754 - 43609887
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  43609754 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 43609851  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||  |||||||||||||||    
T  43609852 ttggtgtttccccactctcttaatatgaaccctaaa 43609887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15044732 - 15044864
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||| ||||||||| ||||| |||||| |||||||||||||||     
T  15044732 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagctttcaagctttacacatgaacaaaccctagattctaccct 15044828  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  15044829 ttggtattttcccactctcacactatgaaccctaaa 15044864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12084226 - 12084096
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  | || | |  ||||||||||||||||||| ||||  ||||||||||    
T  12084226 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--attaacttaaaagcttacacaagaacaagacctaatttctacccat 12084129  T
Q  101 atgtgtttccccactctcacaatatgaaccctaa 134  Q
     |||| |  ||||||||||||||||||| |||||    
T  12084128 ttgtg-tcacccactctcacaatatgaatcctaa 12084096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 11917023 - 11916805
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||  |||||  | |||||||||||||||||||| ||||  |||||||||    
T  11917023 agagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa--aatagtttgcaagcttacacaagaacaagacctaatttctaccca 11916926  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    | | ||| || |||||||||| |  ||||||||| |||||||  ||| | ||||||  || ||||||||||| |  |||| | ||||||||||||||||     
T  11916925 t-tttgtgtcacccactctcaaacgatgaaccct-aagagaaaacacaaaaggaagtttttgatccttccaa-tggtgaaat-ctcactacccaaggtgt 11916830  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  11916829 ttacaatg--tttcccaacccaagaga 11916805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 10281797 - 10281929
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||| | |||||||||||||||||||| ||||  |||||||||    
T  10281797 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttacaagcttacacaagaacaagacctaatttctaccca 10281894  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaa 134  Q
    | | ||| || ||||| ||||||||||||| |||||    
T  10281895 t-tttgtgtcacccacactcacaatatgaatcctaa 10281929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 3880345 - 3880476
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  | |||  | |||||||||||||||||||| ||||  |||||||||    
T  3880345 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagtttacaagcttacacaagaacaagacctaatttctaccca 3880442  T
Q  100 tatgtgtttc-cccactctcacaatatgaacccta 133  Q
    | | ||| || ||||||||||||||||||| ||||    
T  3880443 t-tttgtgtcacccactctcacaatatgaatccta 3880476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 1457067 - 1457020
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457067 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 1457020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 27445150 - 27445197
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445150 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 27445197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 27449994 - 27450041
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449994 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 27450041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 43592459 - 43592506
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592459 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 43592506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 43598904 - 43598951
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598904 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 43598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 43604396 - 43604443
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604396 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 43604443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 43609888 - 43609935
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609888 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 43609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28807611 - 28807485
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||| |  |||| ||||||| ||||||| |||||| ||||||| |||||||     
T  28807611 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaagaatc--tagctttcaagctttacacatgaacaaaccctaga-tctaccct 28807517  T
Q  100 tatgtgtttccccactctcacaatatgaaccc 131  Q
    |  || ||| |||||||||||| |||||||||    
T  28807516 ttggtattttcccactctcacactatgaaccc 28807485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 15044865 - 15044913
Alignment:
Q  188 acccaaggtgattacaatgtttttccc-aacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15044865 acccaaggtgattacaatgtttttcccaaacccaagagacactctcaac 15044913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37556661 - 37556613
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaag 50  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  37556661 agagcagctctccaatccaatatg-tgaaagtgttacaaaaggttacaag 37556613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37561483 - 37561435
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaag 50  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  37561483 agagcagctctccaatccaatatg-tgaaagtgttacaaaaggttacaag 37561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 28807479 - 28807435
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  28807479 cccaaggtgattacaatgtttttcccaacctaagaaacactctca 28807435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31300640 - 31300549
Alignment:
Q  8 ctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||| || ||||||||||||| || | ||| ||||||| |||||  | |||||||||||||||||||| ||||  ||||||||||    
T  31300640 ctctccaatccactaagatgaaagtgttataatgagttgcaagaaa-aatagtttgcaagcttacacaagaacaagtcctaatttctacccat 31300549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19588792 - 19588888
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccc 98  Q
    |||||||| |||||||||| ||||||||||||||||| |||| ||||||||||  | || | |  ||||||||||||||||||| ||||  ||||||||    
T  19588792 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attaccttataagcttacacaagaacaagacctaatttctaccc 19588888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28832305 - 28832357
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaa 53  Q
    |||||||| |||||||||| || |||||||||||||||| | |||||||||||    
T  28832305 agagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 28832357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 42127461 - 42127364
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||| | |||||||| || |||||||||||||||| | ||||||||||  | |||| |  ||||||||| ||||||||| ||||  ||||||||||    
T  42127461 agagcagccccccaatccactaagatgaaagtgttacaatgagttacaagaa--attagcttataagcttacaaaagaacaagtcctactttctacccat 42127364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2785421 - 2785472
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  2785421 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 2785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 24553401 - 24553360
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  24553401 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 24553360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 28832480 - 28832521
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  28832480 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 28832521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31397032 - 31396981
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  31397032 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 31396981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31401889 - 31401838
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  31401889 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 31401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33768225 - 33768276
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  33768225 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 33768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33791362 - 33791413
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  33791362 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 33791413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24787415 - 24787180
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||     
T  24787415 agagcagctctccaatccaatatga-gaaagtgttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatcctagattctaccct 24787317  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa-gagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  24787316 ttggtgtttcccaactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaactaatgaactcctcactgcccaaggtga 24787217  T
Q  199 ttacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||| |||||||||||||||||||||||||||||||||    
T  24787216 ttataatgtttttcccaacccaagagacactctcaac 24787180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 24202820 - 24202591
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  24202820 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 24202722  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  |||  | ||||||||||||||||||    
T  24202721 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgagat-ctcactacccaaggtgat 24202624  T
Q  200 tacaatgtttttcccaacccaagagacactctc 232  Q
    |||||||||||||||||||||||||||||||||    
T  24202623 tacaatgtttttcccaacccaagagacactctc 24202591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19358894 - 19358677
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  19358894 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagacctagattctacccat 19358796  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  19358795 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 19358698  T
Q  200 tacaatgtttttcccaacccaa 221  Q
    ||||||| ||||||||||||||    
T  19358697 tacaatg-ttttcccaacccaa 19358677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 19361483 - 19361262
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||| ||||||||||||||||    
T  19361483 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagtttgcaagcttacacaagaacaagacctagattctacccat 19361385  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  19361384 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 19361287  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||| ||||||||||||||||||    
T  19361286 tacaatg-ttttcccaacccaagaga 19361262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 19380123 - 19379916
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||| ||||||||||||||||    
T  19380123 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagtttgcaagcttacacaagaacaagacctagattctacccat 19380025  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | |||||||||||||||| |    
T  19380024 ttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgtt 19379927  T
Q  200 tacaatgtttt 210  Q
    |||||||||||    
T  19379926 tacaatgtttt 19379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 13604674 - 13604455
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||| | ||| |||||||||||||||| ||||  ||||||||||    
T  13604674 agagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaa-aatagcttgcaaacttacacaagaacaagacctaatttctacccat 13604576  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  13604575 ttgtgttt-cccactctctcaataatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 13604479  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  13604478 tacaatg--tttcccaacccaagaga 13604455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 19366297 - 19366137
Alignment:
Q  64 caagcttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagat 162  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  19366297 caagcttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaagagaagacacaagaggaagctttagat 19366198  T
Q  163 ccttccaactaatgaactcctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||| |  |||| | |||||||||||||||| ||||||| |||||||||||||||||||    
T  19366197 ccttccaa-tggtgaaat-ctcactacccaaggtgtttacaatatttttcccaacccaagaga 19366137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3281754 - 3281971
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  3281754 agagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacctaatttctacccat 3281851  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| ||||||||| |||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  3281852 ttgtgttt-cccactctctcaatgatgaaccct-aagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 3281947  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  3281948 tacaatg--tttcccaacccaagaga 3281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 26644948 - 26644735
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  26644948 agagcagctctccaatccattatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacctaatttctacccat 26644851  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| | ||||||| |||| ||||||||| |||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||| ||||||| |    
T  26644850 ttgtgttt-ctcactctctcaatgatgaaccct-aagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactactcaaggtgtt 26644755  T
Q  200 tacaatgtttttcccaacccaa 221  Q
    |||||||  |||||||||||||    
T  26644754 tacaatg--tttcccaacccaa 26644735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41390627 - 41390759
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  41390627 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 41390723  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  41390724 ttggtattttcccactctcacactatgaaccctaaa 41390759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41398282 - 41398414
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  41398282 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 41398378  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  41398379 ttggtattttcccactctcacactatgaaccctaaa 41398414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 21536620 - 21536416
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||  | ||  |||||||| |    
T  21536620 agagcagctctccaatccactataatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaatacttaatttctacccgt 21536523  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || ||||||||| |||| ||||||||| |||||||| ||| | ||||||| || ||||||||||| |  |||| | || ||||||||||||| |    
T  21536522 ttgtg-ttacccactctctcaatgatgaaccct-aagagaagacacaaaaggaagctttcgatccttccaa-tggtgaaat-cttactacccaaggtgtt 21536427  T
Q  200 tacaatgtttt 210  Q
    |||||||||||    
T  21536426 tacaatgtttt 21536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37069816 - 37070031
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||||||     |||||  | |||||||||||||||||||| ||||  ||||||||||    
T  37069816 agagcatctctccgatccactatgatgaaagtgttacaaagagttacaa-----aatagtttgcaagcttacacaagaacaagacctaatttctacccat 37069910  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| || ||||||| | |||| ||||||| |||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||| || |||||||| |    
T  37069911 ttgtg-ttacccactcactcaataatgaaccataaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcattatccaaggtgtt 37070007  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  37070008 tacaatg--tttcccaacccaagaga 37070031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 32889485 - 32889583
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| || |||||||||||||||| | ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||||||    
T  32889485 agagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa-aatagcttgcaagcttacacaagaacaagtcctaatttctacccat 32889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 47703987 - 47703855
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||| ||||  |||||||||  | |||| | |||||||||||||||||||| ||||  |||||||||    
T  47703987 agagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaa--attagcttacaagcttacacaagaacaagacctaatttctaccca 47703890  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaa 134  Q
    | | ||| || ||||||||||||||||||| |||||    
T  47703889 t-tttgtgtcacccactctcacaatatgaatcctaa 47703855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 41390760 - 41390807
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390760 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 41390807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 41398415 - 41398462
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398415 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 41398462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25445128 - 25444996
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcct-tcaagc-ttacacaagaacaagccctagattctaccc 98  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||| | |||||| ||||||| |||||| |||||||  ||||||    
T  25445128 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagcttatcaagctttacacatgaacaaaccctaga-gctaccc 25445033  T
Q  99 atatgtgtttccccactctcacaatatgaaccctaaa 135  Q
     |  || ||| |||||||||||| |||||||||||||    
T  25445032 tttggtattttcccactctcacactatgaaccctaaa 25444996  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9476307 - 9476393
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagcccta 88  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |||| |||||  | |||| | |||||||||||||||||||| ||||    
T  9476307 agagcagctctccaatccactatgatgaaagtattacaaaagagttataagaa--attagcttacaagcttacacaagaacaagaccta 9476393  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16124567 - 16124469
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||||||||| |||| ||||||||||  | |||| |  ||||||||| ||||||||| ||||  |||||||||    
T  16124567 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa--attagcttataagcttacataagaacaagacctaatttctaccca 16124470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27104423 - 27104370
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  27104423 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 27104370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 47098875 - 47098778
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||| |||||||||| || |||||||||||||||| | ||||||||||  | |||| |  ||||||||| ||||||||| ||||  ||||||||||    
T  47098875 agagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaa--attagcttataagcttacaaaagaacaagtcctaatttctacccat 47098778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19072974 - 19073027
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    ||||||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  19072974 agagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaa 19073027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19120864 - 19120917
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    ||||||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  19120864 agagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaa 19120917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29651857 - 29651955
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||||||||| ||||  |||||||||  | || | |  ||||||||||||||||||| ||||  |||||||||    
T  29651857 agagcagcactccaatccactatgatgaaagtgttacaaaagaattacaagaa--attaacttataagcttacacaagaacaagacctaatttctaccca 29651954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 1054917 - 1054873
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  1054917 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 1054873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25439801 - 25439757
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  25439801 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 25439757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 25444994 - 25444950
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  25444994 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 25444950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 39445679 - 39445723
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  39445679 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 39445723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 44023779 - 44023735
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  44023779 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 44023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39445546 - 39445594
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  39445546 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 39445594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44023912 - 44023864
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  44023912 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 44023864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 48382524 - 48382479
Alignment:
Q  9 tctccaatccaatatgatgaaagtgttacaaa-gggttacaagaaa 53  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||    
T  48382524 tctccaatccaatatgatgaaagtgatacaaataggttacaagaaa 48382479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13598444 - 13598525
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaag 83  Q
    |||||||| || ||||||| |||||||||||||||||||| | | |||||||||   |||| |  |||||||||||||||||||    
T  13598444 agagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaat--tagcttataagcttacacaagaacaag 13598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43988503 - 43988452
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  43988503 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 43988452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 47098699 - 47098658
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  47098699 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 47098658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 47102713 - 47102672
Alignment:
Q  182 ctcactacccaaggtgattacaatgtttttcccaacccaagaga 225  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  47102713 ctcactacccaaggtgtttacaatg--tttcccaacccaagaga 47102672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 5674821 - 5674589
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaag-aacaagccctagattctaccca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||||     
T  5674821 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagcttgcaagcttacacaagaaacaagacctagattctaccct 5674722  T
Q  100 tatgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    |  |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||    
T  5674721 ttggtgtttccccactctcacaatatgaaccctaaaagagaagacactagaggaagctttagatccttccaa-tggtgaactcctcactacccaaggtga 5674623  T
Q  199 ttacaatgtttttcccaacccaagagacactctc 232  Q
    ||||||||||||||||||||||||||||||||||    
T  5674622 ttacaatgtttttcccaacccaagagacactctc 5674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5757529 - 5757311
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | |||||||| ||||||||||| ||||  ||||||||||    
T  5757529 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttatacaagaacaagacctaatttctacccat 5757432  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| |||| | ||||| |||| |||||||||||||||||| |||   ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  5757431 ttgtg-ttccactctctctcaataatgaaccctaaagagaagacacggaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 5757335  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  5757334 tacaatg--tttcccaacccaagaga 5757311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 22709064 - 22709274
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||||||||||||          |||| |||||| | |||||||||||||||||||| ||||| ||||||||||    
T  22709064 agagcagctctccaatccactatgatgaaagtgttacaa----------gaaa-aatagcttgcaagcttacacaagaacaagtcctagtttctacccat 22709152  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||  || ||||||||||| |  |||| | ||||||| |||||||| |    
T  22709153 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagtttttgatccttccaa-tggtgaaat-ctcactatccaaggtgtt 22709250  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  22709251 tacaatg--tttcccaacccaagaga 22709274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21356082 - 21356301
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||| | | |||||||||||||||||||| ||||  ||||||||||    
T  21356082 agagcagctctccaatccactatgatgaaagtgttactaagagttacaagaaa-aataacttgcaagcttacacaagaacaagacctaatttctacccat 21356180  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| | ||||||| |||| |||||||||||||| ||| ||| | ||||||| || ||| ||||||| | ||||| | |||||||||||||||| |    
T  21356181 ttgtgttt-ctcactctctcaataatgaaccctaaagaaaagacacaaaaggaagcttttgattcttccaa-tgatgaaat-ctcactacccaaggtgtt 21356277  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  ||||| |||||||||||    
T  21356278 tacaatg--tttcctaacccaagaga 21356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11857020 - 11857153
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  11857020 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 11857117  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  |||||||||||||||||||||||||||||||||    
T  11857118 ttggtgtttccccactctcacaatatgaaccctaaa 11857153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22010736 - 22010603
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  22010736 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa-ctctagccttcaagctttacacatgaacaaaccctagattctaccct 22010639  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |   | ||||||||||||||||||||||||||||||    
T  22010638 ttgatatttccccactctcacaatatgaaccctaaa 22010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14737615 - 14737483
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||| | |||||| |||||||||||||||     
T  14737615 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacatatgaacaaaccctagattctaccct 14737519  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  14737518 ttggtattttcccactctcacactatgaaccctaaa 14737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14742475 - 14742343
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |  |||||||||||||| ||| | |||||| |||||||||||||||     
T  14742475 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc--tagccttcaagctttacatatgaacaaaccctagattctaccct 14742379  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  14742378 ttggtattttcccactctcacactatgaaccctaaa 14742343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28184551 - 28184683
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||| |  |  |||||||||||||| ||||| |||||| |||||||||||||||     
T  28184551 agagcagctctccaatctaatatga-gaaagtgttacaaaaggttacaacactc--tagccttcaagctttacacatgaacaaaccctagattctaccct 28184647  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  28184648 ttggtattttcccactctcacactatgaaccctaaa 28184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 28155608 - 28155477
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||    |||| ||||||| ||||||| |||||| ||||||| |||||||     
T  28155608 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa--tttagctttcaagctttacacatgaacaaaccctaga-tctaccct 28155513  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  28155512 ttggtattttcccactctcacactatgaaccctaaa 28155477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 11857154 - 11857201
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857154 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 11857201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 14737482 - 14737435
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737482 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 14737435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 22010602 - 22010555
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010602 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 22010555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 14742342 - 14742295
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  14742342 acccaaagtgattacaatgtttttcccaacccaagagacactctcaac 14742295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5572292 - 5572076
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||| ||    
T  5572292 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctacgca 5572195  T
Q  100 tatgtgtttc-cccactctcacaatatgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
    | | ||| || ||||| ||| ||  ||||| ||| |||||||  ||| | ||||||| || |||| |||||| || |||| | ||||||||||||||||     
T  5572194 t-tttgtgtcacccacactctca--atgaatcct-aagagaaaacacaaaaggaagcttttgatcattccaa-tagtgaaat-ctcactacccaaggtgt 5572101  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  5572100 ttacaatg--tttcccaacccaagaga 5572076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31086524 - 31086426
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||| |||||||||||| |||||||||||||||||||||| |||||||||||   |||| |  |||||||||||||| |||| ||||  |||||||||    
T  31086524 agagcaactctccaatccactatgatgaaagtgttacaaaggagttacaagaaat--tagcttataagcttacacaagagcaagacctaatttctaccca 31086427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 28155475 - 28155431
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  28155475 cccaaggtgattacaatgtttttcccaacctaagaaacactctca 28155431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10077216 - 10077118
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca 99  Q
    |||||||| |||||||||| ||||||||||||||||| |||  ||||||||||  | |||| |  ||||||||| ||||||||| ||||  |||||||||    
T  10077216 agagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaa--attagcttataagcttacaaaagaacaagacctaatttctaccca 10077119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22963745 - 22963798
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  22963745 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 22963798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23824648 - 23824595
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  23824648 agagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 23824595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 6438680 - 6438724
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  6438680 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 6438724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4630000 - 4630039
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaa 40  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  4630000 agagcagctctccaatccactaagatgaaagtgttacaaa 4630039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6438547 - 6438595
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  6438547 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 6438595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16838790 - 16838923
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagc-cttcaagc-ttacacaagaacaagccctagattctacc 97  Q
    |||||||||||||||||||||||| |||| ||||||| |||| |||||||||| |  ||||  ||||||| ||||||| |||||| ||||||| ||||||    
T  16838790 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaatc--tagctattcaagctttacacatgaacaaaccctaga-tctacc 16838885  T
Q  98 catatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    | |  || ||| ||||  |||||| |||||||||||||    
T  16838886 ctttggtattttcccatcctcacactatgaaccctaaa 16838923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6005463 - 6005514
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  6005463 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 6005514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 21801394 - 21801342
Alignment:
Q  2 gagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaa 53  Q
    |||||||||||||||||| || ||| |||||||||| |||| |||||||||||    
T  21801394 gagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaa 21801342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 28184684 - 28184734
Alignment:
Q  188 acccaaggtgattacaatgttttt---cccaacccaagagacactctcaac 235  Q
    ||||||||||||||| ||||||||   || |||||||||||||||||||||    
T  28184684 acccaaggtgattactatgtttttttcccaaacccaagagacactctcaac 28184734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33330484 - 33330433
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  33330484 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 33330433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33335981 - 33335930
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  33335981 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 33335930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 18003 - 17781
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| | ||| ||||||||||    
T  18003 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcatagtttctacccat 17905  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | ||||||||||||||||||    
T  17904 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgat 17807  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  17806 tacaatgtttttcccaacccaagaga 17781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 24096 - 23874
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| | ||| ||||||||||    
T  24096 agagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa-aatagcttgcaagcttacacaagaacaagtcatagtttctacccat 23998  T
Q  101 atgtgtttccccactctcacaatatgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||| |  |||| | ||||||||||||||||||    
T  23997 ttgtgtttccccactctcacaatatgaaccctaaaagagaagacacaagaggaagctttagatccttccaa-tggtgaaat-ctcactacccaaggtgat 23900  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    ||||||||||||||||||||||||||    
T  23899 tacaatgtttttcccaacccaagaga 23874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 133331 - 133112
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||| | ||| |||||||||||||||| ||||  ||||||||||    
T  133331 agagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaa-aatagcttgcaaacttacacaagaacaagacctaatttctacccat 133233  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  133232 ttgtgttt-cccactctctcaataatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 133136  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||  |||||||||||||||||    
T  133135 tacaatg--tttcccaacccaagaga 133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 2540 - 2577
Alignment:
Q  3 agcagctctccaatccaatatgatgaaagtgttacaaa 40  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  2540 agcagccctccaatccactatgatgaaagtgttacaaa 2577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5729 - 5810
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaag 83  Q
    |||||||| || ||||||| |||||||||||||||||||| | | |||||||||   |||| |  |||||||||||||||||||    
T  5729 agagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaat--tagcttataagcttacacaagaacaag 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 8470 - 8250
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||| ||||  ||||||  ||    
T  8470 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa-aatagcttgcaagcttacacaagaacaagacctaatttctacgtat 8372  T
Q  101 atgtgtttccccactctcacaat-atgaaccct-aaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtga 198  Q
     ||||||| ||||||||| |||| ||||||||| ||||||||| ||| | ||||||| ||  |||||||||| |  |||| | ||||||||||||||||     
T  8371 ttgtgttt-cccactctctcaataatgaaccctaaaagagaagacacaaaaggaagcttttaatccttccaa-tggtgaaat-ctcactacccaaggtgt 8275  T
Q  199 ttacaatgtttttcccaacccaagaga 225  Q
    ||||||||  |||||||||||||||||    
T  8274 ttacaatg--tttcccaacccaagaga 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36883 - 36665
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    |||||||||| |||| ||| ||||||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| | |   ||||||||||    
T  36883 agagcagctcgccaacccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttacacaagaacaagacatgatttctacccat 36786  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     ||||||| ||||||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  36785 ttgtgttt-cccactctctcaataatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 36689  T
Q  200 tacaatgtttttcccaacccaagaga 225  Q
    |||||||||||  |||||||||||||    
T  36688 tacaatgtttt--ccaacccaagaga 36665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44012 - 43798
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacccat 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| | |||||||| ||||||||||| ||||  ||||||||||    
T  44012 agagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa--aatagcttgcaagcttatacaagaacaagacctaatttctacccat 43915  T
Q  101 atgtgtttccccactctcacaat-atgaaccctaaagagaaggcactagaggaagccttagatccttccaactaatgaactcctcactacccaaggtgat 199  Q
     |||| |||| | ||||| |||| |||||||||||||||||| ||| | ||||||| || ||||||||||| |  |||| | |||||||||||||||| |    
T  43914 ttgtg-ttccactctctctcaataatgaaccctaaagagaagacacaaaaggaagcttttgatccttccaa-tggtgaaat-ctcactacccaaggtgtt 43818  T
Q  200 tacaatgtttttcccaacccaa 221  Q
    |||||||  |||||||||||||    
T  43817 tacaatg--tttcccaacccaa 43798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35101 - 34968
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagctt-acacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |  |||||||||||||| ||||| |||||| ||||||| |||||||     
T  35101 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttagaagaa-ctctagccttcaagctttacacatgaacaaaccctagactctaccct 35004  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  ||||||||||||||||||| |||||||||||||    
T  35003 ttggtgtttccccactctcacactatgaaccctaaa 34968  T

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Target: scaffold0135; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 34967 - 34920
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  34967 acccaaggtgattacaatgttttcccaaacccaagagacactctcaac 34920  T

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Target: scaffold0355 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9681 - 9550
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||  ||  |||||||||||| ||||||| |||||| ||||||| |||||||     
T  9681 agagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaaccctaga-tctaccct 9586  T
Q  100 tatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |  || ||| |||||||||||| |||||||||||||    
T  9585 ttggtattttcccactctcacactatgaaccctaaa 9550  T

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Target: scaffold0355; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 3754 - 3707
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaagagacactctcaac 235  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  3754 acccaaggtgattacaatgtttttcctaacctaagagacactctcaac 3707  T

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Target: scaffold0355; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 3833 - 3755
Alignment:
Q  57 tagccttcaagctt-acacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaa 135  Q
    |||||||||||||| ||||| |||||| |||||||| |||||| |  || ||| |||||||||||| |||||||||||||    
T  3833 tagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaa 3755  T

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Target: scaffold0355; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 9549 - 9514
Alignment:
Q  188 acccaaggtgattacaatgtttttcccaacccaaga 223  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9549 acccaaggtgattacaatgtttttcccaacctaaga 9514  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 85729 - 85854
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctaccca- 99  Q
    ||||| |||||||||||||  |||||||||||||||||||| |||||||||||   |||| |  |||||||||||||| |||| ||||  |||||||||     
T  85729 agagcggctctccaatccaccatgatgaaagtgttacaaagagttacaagaaat--tagcttaaaagcttacacaagagcaagacctaatttctacccat 85826  T
Q  100 tatgtgtttccccactctcacaatatgaa 128  Q
    | ||||| | ||||||| |||||||||||    
T  85827 tttgtgtct-cccactcccacaatatgaa 85854  T

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Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10775 - 10861
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaaacaatagccttcaagcttacacaagaacaagcccta 88  Q
    ||||||||||||||||||| || |||||||||||||| |||| ||||||||||  | |||  | |||||||||||||||||||| ||||    
T  10775 agagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa--attagtttacaagcttacacaagaacaagaccta 10861  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17309 - 17404
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagg-gttacaagaaacaatagccttcaagcttacacaagaacaagccctagattctacc 97  Q
    |||||| | |||||||||| |||||||||||||||||||| | |||||||||||   |||| |  ||||||||||||||||||| ||||  |||||||    
T  17309 agagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaat--tagcttataagcttacacaagaacaagacctaatttctacc 17404  T

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Target: scaffold0464 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 542 - 586
Alignment:
Q  189 cccaaggtgattacaatgtttttcccaacccaagagacactctca 233  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  542 cccaaggtgattacaatgtttttcccaacctaagaaactctctca 586  T

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Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 409 - 457
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaaagggttacaaga 51  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  409 agagcagctctccaatccaatatg-tg-aagtgttacaaaaggttacaaga 457  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45299 - 45337
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttacaa 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  45299 agagcagctctccaatccactatgatgaaagcgttacaa 45337  T

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Target: scaffold0197 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14348 - 14297
Alignment:
Q  1 agagcagctctccaatccaatatgatgaaagtgttac-aaagggttacaagaa 52  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  14348 agagcagctctccaatccaatatg-tgaatgtgttacaaaagagttacaagaa 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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