View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18634_high_11 (Length: 256)
Name: NF18634_high_11
Description: NF18634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18634_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 7685030 - 7685242
Alignment:
| Q |
1 |
ataaccaaagttctataccaccaatttgagcatatatctgggcgtgaagtttggtttttgaaacccatttaaatgacttcgaggggctcttctccatttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7685030 |
ataaccaaagttctataccaccaatttgagcatatatctgggcgtgaagtttggtttttgaaacccatttaaatgacttcgaggggctcttctccatttt |
7685129 |
T |
|
| Q |
101 |
cattcttgcagcttcactgagttttgcaacatatctttgattaggtctaattaagagccttgtacattcacttggaatacaatcaatataaaaaactcta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7685130 |
cattcttgcagcttcactgagttttgcaacatatctttgattaggtctaattaagagccttgtacattcacttggaatacaatcaatataaaaaactcta |
7685229 |
T |
|
| Q |
201 |
gaatttcaccgcc |
213 |
Q |
| |
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||||||||||||| |
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|
| T |
7685230 |
gaatttcaccgcc |
7685242 |
T |
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