View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18634_low_11 (Length: 291)
Name: NF18634_low_11
Description: NF18634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18634_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 37835019 - 37835283
Alignment:
| Q |
18 |
ctataaacattacaatgagtcaca-tgttaaaatagatacacagaaaaagtgaacgaagaataaaagcataaaaaggttattcaaaatgttctcttagcg |
116 |
Q |
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| T |
37835019 |
ctataaacattacaatgagtgacaatgttaaaatagatacacagaaaaagtgaacgaagaataaaagcataaaaaggttattcaaaatgttctcttagcg |
37835118 |
T |
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| Q |
117 |
caaaagtaaaacatttcaaatctttaaatagaatgagggaagcccaagaaaaatatacctaattcagcttcttcacattctgatgcttgagcaccgttag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37835119 |
caaaagtaaaacatttcaaatctttaaatagaatgagggaagcccaagaaaaatatacctaattcagcttcttcacattctgatgcttgagcaccgttag |
37835218 |
T |
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| Q |
217 |
tttgcaaatgaatatggtaactatgtggatgaagattagacgattgggaagtttccatttctgtg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
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| T |
37835219 |
tttgcaaatgaatatggtaactatgtggatgaagattagacgatcgagaagtttccatttctgtg |
37835283 |
T |
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