View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18635_low_9 (Length: 335)
Name: NF18635_low_9
Description: NF18635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18635_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 27 - 321
Target Start/End: Original strand, 7410614 - 7410908
Alignment:
| Q |
27 |
accatcatatcaagccctagtttctctgagttctcttgtagaaattaagaatctggaaactttttaactattcaagtcaagtgaattactcaaactacgt |
126 |
Q |
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| T |
7410614 |
accatcatatcaagccctagtttctctgagttctcttgtagaaattaagaatctggaaactttttaactattcaagtcaagtgaattactcaaactacgt |
7410713 |
T |
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| Q |
127 |
ttctttttgttaagtgaatagttaaaatttagaaaacaaaattgaagtgaatagtgagtaaatcatgttggnnnnnnnacagctcatgttgatttgaaac |
226 |
Q |
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| T |
7410714 |
ttctttttgttaagtgaatagttaaaatttagaaaacaaaattgaagtgaatagtgagtaaatcatgttggtttttttacagctcatgttgatttgaaac |
7410813 |
T |
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| Q |
227 |
ttgcgcaatcttaggacctagtgaataataacatttcctgtcattgccgcataattaactgtccgatataaatatttgccagtacatttattttg |
321 |
Q |
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| T |
7410814 |
ttgcgcaatcttaggacctagtgaataataacatttcctgtcattgccgcataattaactgtccgatataaatatttgccagtacatttattttg |
7410908 |
T |
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