View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18636_high_22 (Length: 326)
Name: NF18636_high_22
Description: NF18636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18636_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 35835629 - 35835930
Alignment:
| Q |
19 |
gaaggcagtggtcgctttggtagaggcgcagatttgtatctctctttataagctagaagctatatgatatgtcaaatcattgtacaaaatttggcaaggt |
118 |
Q |
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| T |
35835629 |
gaaggcagtggtcgctttggtagaggcgcagatttgtatctctctttataagctagaagctatatgatatgtcaaatcattgtacaaaatttggcaaggt |
35835728 |
T |
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| Q |
119 |
ttaactgtaaatagaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgttacaaaggaaagcaaaaataaatgcagca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35835729 |
ttaactgtaaatagaaacccttaagccttttgagatgaaggtaactaatcaactaagcaaaacttgtatgttacaaaggaaagcaaaaataaatgcagca |
35835828 |
T |
|
| Q |
219 |
gttggtacaaagataacatcagggtctctcat-tttctatgaatccttccttacaacccttccctcaacaaatacataaccaagctcagtatcttcatct |
317 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35835829 |
gttggtacaaagataacatcagggtctctcatccttctatgaatccttccttacaacccttccctcaacaaatacataaccaagctcagtatcttcttct |
35835928 |
T |
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| Q |
318 |
ca |
319 |
Q |
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|| |
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| T |
35835929 |
ca |
35835930 |
T |
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