View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18636_low_3 (Length: 548)

Name: NF18636_low_3
Description: NF18636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18636_low_3
NF18636_low_3
[»] chr7 (19 HSPs)
chr7 (6-520)||(27281495-27282009)
chr7 (6-520)||(27295976-27296477)
chr7 (6-497)||(27271397-27271898)
chr7 (236-437)||(27248956-27249159)
chr7 (236-349)||(27304366-27304479)
chr7 (147-349)||(27220204-27220406)
chr7 (236-325)||(27243101-27243190)
chr7 (237-349)||(27301506-27301621)
chr7 (231-349)||(27165514-27165632)
chr7 (236-349)||(27157974-27158087)
chr7 (238-349)||(27147110-27147221)
chr7 (236-315)||(27312620-27312699)
chr7 (236-349)||(27134062-27134174)
chr7 (253-341)||(27246109-27246201)
chr7 (253-341)||(27227832-27227924)
chr7 (236-318)||(27322896-27322978)
chr7 (253-318)||(27235953-27236018)
chr7 (390-437)||(27243003-27243050)
chr7 (11-106)||(27249295-27249390)
[»] chr1 (3 HSPs)
chr1 (240-325)||(14889929-14890014)
chr1 (240-318)||(14884278-14884356)
chr1 (401-442)||(14890072-14890113)


Alignment Details
Target: chr7 (Bit Score: 471; Significance: 0; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 6 - 520
Target Start/End: Complemental strand, 27282009 - 27281495
Alignment:
Q  6 agcagcacagactttagggagggcagccaaggcggtaagatcgagtccaggtatgccgatcataaggcctttgaggcaactgcaaacagcttgacgatct 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27282009 agcaccacagactttagggagggcagccaaggcggtaagatcgagtccaggtatgccgatcataaggcctttgaggcaactgcaaacagcttgacgatct 27281910  T
Q  106 tcgcgagttctggcttgggcagttacatcgagaactgcatcgcaacatggttgagggggaggtggatttgggtatgctacgtacgaaaggcatgccgtta 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27281909 tcgcgagttctggcttgggcagttacatcgagaactgcatcgcaacatggttgagggggaggtggatttgggtatgctacgtacgaaaggcatgccgtta 27281810  T
Q  206 aagttatatccgtatcaggacatctaatgacagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattga 305  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27281809 aagttatatccgtatcaggacatgtaatgacagcattggctagtggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaagcattga 27281710  T
Q  306 actagccatgatttggaaattttggaagaggaaatgcaattcaactattttggaagaggcgaatggttgtattatggtgcccatctaattaatggctatt 405  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  27281709 actagccatgatttggaaattttggaagaggaaatgtaattcaactattttggaagaggcgaatgaatgtgttatggtgcccatctaattaatggctatt 27281610  T
Q  406 tatagagaatagatgacaactcagcttccaatatttaatatttactgtgaaaggagtgttttacttacaatcaatatctcaagagtaaacaaacaatcat 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27281609 tatagagaatagatgacaactcagcttccaatatttaatatttactgtgcaaggagtgttttacctactatcaatatctcaagagtaaacaaacaatcat 27281510  T
Q  506 ttgtattttattaaa 520  Q
    |||||||||||||||    
T  27281509 ttgtattttattaaa 27281495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 6 - 520
Target Start/End: Complemental strand, 27296477 - 27295976
Alignment:
Q  6 agcagcacagactttagggagggcagccaaggcggtaagatcgagtccaggtatgccgatcataaggcctttgaggcaactgcaaacagcttgacgatct 105  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27296477 agcaccacagactttagggagggaagccaaggcggtaagatcgagtccaggtatgccgttcataaggcctttgaggcaactgcaaacagcttgacgatct 27296378  T
Q  106 tcgcgagttctggcttgggcagttacatcgagaactgcatcgcaacatggttgagggggaggtggatttgggtatgctacgtacgaaaggcatgccgtta 205  Q
    ||||||||| |||||||| |||||||||| ||||||||| |||||||   ||||||||||| |||| |||||| ||||||||||| ||||||| || |||    
T  27296377 tcgcgagttatggcttggccagttacatcaagaactgcagcgcaacaattttgagggggagatggagttgggtgtgctacgtacggaaggcatcccatta 27296278  T
Q  206 aagttatatccgtatcaggacatctaatgacagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattga 305  Q
    |||||||  ||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27296277 aagttatggccgcatcacgacatgtaatgacagcattggctagtggaatgcccaaaaccaagcatatcgtagccaaacaagtaaccttgacaagcattga 27296178  T
Q  306 actagccatgatttggaaattttggaagaggaaatgcaattcaactattttggaagaggcgaatggttgtattatggtgcccatctaattaatggctatt 405  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||         | ||    |||||||||||    
T  27296177 actagccatgatttggaaatttttgaagaggaaatgcaattcaactactttggaagaggtgaatggttgtat--------acttc----taatggctatt 27296090  T
Q  406 tatagagaatagatgacaactcagcttccaatatttaatatttactgtgaaaggagtgttttacttacaatcaatatctcaagagtaaacaaacaatcat 505  Q
    |||||||||||||   ||||| |||||||||||||||| ||||||||||  | |||||||||||  || |||||||||||||||||||||||||||||||    
T  27296089 tatagagaatagactgcaact-agcttccaatatttaacatttactgtgccatgagtgttttacccacgatcaatatctcaagagtaaacaaacaatcat 27295991  T
Q  506 ttgtattttattaaa 520  Q
    ||||||||| |||||    
T  27295990 ttgtattttcttaaa 27295976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 6 - 497
Target Start/End: Complemental strand, 27271898 - 27271397
Alignment:
Q  6 agcagcacagactttagggagggcagccaaggcggtaagatcgagtccaggtatgccgatcataaggcctttgaggcaactgcaaacagcttgacgatct 105  Q
    |||||||||||   |||||| |||||| ||||||||||||||||| |||||||||||  |||||||||||   |||||  ||||||| ||||||||||||    
T  27271898 agcagcacagagaatagggacggcagcaaaggcggtaagatcgagcccaggtatgccattcataaggcctaaaaggcatttgcaaaccgcttgacgatct 27271799  T
Q  106 tcgcgagttctggcttgggcagttacatcgagaactgcatcgcaacatggttgagggggaggtggatttgggtatgctacgtacgaaaggcatgccgtta 205  Q
    |||||||||   ||| |||||||||   ||||||| |||  |||||||  | |||||||   | || |||||| ||||||||||| |||||||| | |||    
T  27271798 tcgcgagttacagctcgggcagttaggccgagaaccgcagtgcaacattctagagggggccattgagttgggtgtgctacgtacggaaggcatgacttta 27271699  T
Q  206 aagttatatccgtatcaggacatctaatgacagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattga 305  Q
    ||||||| |||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||    
T  27271698 aagttatgtccgcatcaggacatgtaatgacagcattggctagtggaatgctcaaaaccaagcatatcatagccaaacaagtaaccttgacaaggattga 27271599  T
Q  306 actagccatgatttggaaattttggaagaggaaatgcaattcaactattttggaagaggcgaatggttgtatta---tggtgcccatctaattaatggct 402  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||   ||||||| |||||||||||||||    
T  27271598 actagccatgatttggaaattttggaagaggaaatgtaattcaactattttggaagaggtgaatggttgtgttatggtggtgcctatctaattaatggct 27271499  T
Q  403 attta-------tagagaatagatgacaactcagcttccaatatttaatatttactgtgaaaggagtgttttacttacaatcaatatctcaagagtaaac 495  Q
    |||||       ||||||||||| | ||||| ||||| |||||||||| ||||||| || |||| |||||||||  |  |||||||||||||||||||||    
T  27271498 atttatagagattagagaatagacggcaacttagctttcaatatttaacatttactttgcaaggtgtgttttacccaagatcaatatctcaagagtaaac 27271399  T
Q  496 aa 497  Q
    ||    
T  27271398 aa 27271397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 236 - 437
Target Start/End: Complemental strand, 27249159 - 27248956
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagag 335  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27249159 cagcattagctagtggaatgcccaaaactaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttcgaagag 27249060  T
Q  336 gaaatgcaattcaactattttggaagaggcgaatggttgtattatggtgcccatctaatt--aatggctatttatagagaatagatgacaactcagcttc 433  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||||||  ||||||||||||||| |||||| || ||||||| ||||    
T  27249059 gaaatgtaattcaactattttggaagaggtgaatggttgtgttatggtgcctatctaattaaaatggctatttatagggaataggtggcaactcaacttc 27248960  T
Q  434 caat 437  Q
    ||||    
T  27248959 caat 27248956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 27304479 - 27304366
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagag 335  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  27304479 cagcactggctagtggaatgcccaaaaccaagcatatcatagccaagcaagtaactttgacaagcattgaactagccatgatttggaaattttggaagag 27304380  T
Q  336 gaaatgcaattcaa 349  Q
    ||||||||||||||    
T  27304379 gaaatgcaattcaa 27304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 147 - 349
Target Start/End: Complemental strand, 27220406 - 27220204
Alignment:
Q  147 gcaacatggttgagggggaggtggatttgggtatgctacgtacgaaaggcatgccgttaaagttatatccgtatcaggacatctaatgacagcattggct 246  Q
    |||||||||||||||||||| ||||  ||||| || ||||| || ||||||||  |||||||||    ||    ||||||||  |  | |||||||||||    
T  27220406 gcaacatggttgagggggagatggacctgggtttgatacgtgcggaaggcatggtgttaaagtttgtgccactgcaggacatgaaggggcagcattggct 27220307  T
Q  247 aatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagaggaaatgcaatt 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||  ||||||||||| |||    
T  27220306 aatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttcaaaagcattgaactagccatgatttggaaattttgatagaggaaatgctatt 27220207  T
Q  347 caa 349  Q
    |||    
T  27220206 caa 27220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 27243190 - 27243101
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaat 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27243190 cagcattggctagtggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaagcattgaactagccatgatttggaaat 27243101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 27301621 - 27301506
Alignment:
Q  237 agcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttga---caaacattgaactagccatgatttggaaattttggaag 333  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||   ||| ||||||||||||||||||||||||||||||||||    
T  27301621 agcattggctaatggaatgcacaaaaccaagcatatcatagccaagcaagtaactttgatcacaagcattgaactagccatgatttggaaattttggaag 27301522  T
Q  334 aggaaatgcaattcaa 349  Q
    ||||||||| ||||||    
T  27301521 aggaaatgctattcaa 27301506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 231 - 349
Target Start/End: Complemental strand, 27165632 - 27165514
Alignment:
Q  231 aatgacagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttgg 330  Q
    |||| |||||||||||||||||||| |||||||||||||||||| || ||||||||| | ||| |||| ||||||  ||||||||||||||||||||||     
T  27165632 aatggcagcattggctaatggaatggccaaaaccaagcatatcacagacaaacaagtgatcttaacaagcattgaggtagccatgatttggaaattttga 27165533  T
Q  331 aagaggaaatgcaattcaa 349  Q
     ||||||||||||||||||    
T  27165532 tagaggaaatgcaattcaa 27165514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 27158087 - 27157974
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagag 335  Q
    ||||||| |||||||||||| ||||||||||||| |||| || ||||||||||||||| | || |||||| |||||||||||||||||||||||  ||||    
T  27158087 cagcatttgctaatggaatggccaaaaccaagcacatcacagacaaacaagtaaccttaataagcattgagctagccatgatttggaaattttgatagag 27157988  T
Q  336 gaaatgcaattcaa 349  Q
    ||||||||||||||    
T  27157987 gaaatgcaattcaa 27157974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 27147221 - 27147110
Alignment:
Q  238 gcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagagga 337  Q
    ||||| |||||||||||| |||||| |||||| |||| || ||||||||||||||| | || |||||| |||||||||||||||||||||||  ||||||    
T  27147221 gcatttgctaatggaatggccaaaagcaagcacatcacagacaaacaagtaaccttaataagcattgagctagccatgatttggaaattttgatagagga 27147122  T
Q  338 aatgcaattcaa 349  Q
    ||||||||||||    
T  27147121 aatgcaattcaa 27147110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 27312699 - 27312620
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatg 315  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  27312699 cagcattggctaagggagtgcccaaaaccaagcatatcatagccaagaaagtaatcttgacaaacattgagctagccatg 27312620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 27134174 - 27134062
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaattttggaagag 335  Q
    ||||||| | |||||||||| ||||||||||||||| ||||| || |||||||| ||| |||| |||||| ||||||||| |||||| | ||||  ||||    
T  27134174 cagcatttgataatggaatgaccaaaaccaagcatagcatagacatacaagtaatcttaacaagcattgagctagccatggtttggaga-tttgatagag 27134076  T
Q  336 gaaatgcaattcaa 349  Q
    ||||||| ||||||    
T  27134075 gaaatgctattcaa 27134062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 27246201 - 27246109
Alignment:
Q  253 atgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatga----tttggaaattttggaagaggaaatg 341  Q
    ||||||| |||||||||||||| || ||| |||||||||||||||||||||||  |||||||||    |||||||||||| ||||||| ||||    
T  27246201 atgcccagaaccaagcatatcacagtcaagcaagtaaccttgacaaacattgaggtagccatgattgttttggaaatttttgaagagggaatg 27246109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 27227924 - 27227832
Alignment:
Q  253 atgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatga----tttggaaattttggaagaggaaatg 341  Q
    ||||||| |||||||||||||| || ||| || ||||||||||||||||||||  |||||||||    |||||||||||| ||||||| ||||    
T  27227924 atgcccagaaccaagcatatcacagtcaagcatgtaaccttgacaaacattgaggtagccatgattgttttggaaatttttgaagagggaatg 27227832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 27322978 - 27322896
Alignment:
Q  236 cagcattggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatt 318  Q
    ||||||||||||| |||||||| ||||||||||||||||  || || |||||||||||||  | |||||| || |||||||||    
T  27322978 cagcattggctaagggaatgccaaaaaccaagcatatcactgctaagcaagtaaccttgaagagcattgagctggccatgatt 27322896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 27236018 - 27235953
Alignment:
Q  253 atgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatt 318  Q
    ||||||| |||||||||||||| |  |||  ||||||||||||||||||||||  |||||||||||    
T  27236018 atgcccagaaccaagcatatcacaatcaagaaagtaaccttgacaaacattgaggtagccatgatt 27235953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 27243050 - 27243003
Alignment:
Q  390 ctaattaatggctatttatagagaatagatgacaactcagcttccaat 437  Q
    ||||||||| | ||||||||||||||||| ||||||||| ||||||||    
T  27243050 ctaattaattgttatttatagagaatagacgacaactcaacttccaat 27243003  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 27249390 - 27249295
Alignment:
Q  11 cacagactttagggagggcagccaaggcggtaagatcgagtccaggtatgccgatcataaggcctttgaggcaactgcaaacagcttgacgatctt 106  Q
    ||||| |||||||||||| ||| | ||| | ||||| ||||||||||||||||  ||| | |  ||||||||||| ||||||| || |||||||||    
T  27249390 cacagtctttagggagggaagcaatggcaggaagattgagtccaggtatgccgcccatcatggatttgaggcaaccgcaaacatctcgacgatctt 27249295  T

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Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 14889929 - 14890014
Alignment:
Q  240 attggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatttggaaat 325  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  14889929 attggccagtggaatgctcaaaaccaagcatatcatagccaaacaagtaaccttggtaagcattgaactagccatgatttggaaat 14890014  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 14884278 - 14884356
Alignment:
Q  240 attggctaatggaatgcccaaaaccaagcatatcatagccaaacaagtaaccttgacaaacattgaactagccatgatt 318  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  || |||||||||||||||||||    
T  14884278 attggctattggaatgcccaaaaccaagcataacatagccaaacaagtaaccttggtaagcattgaactagccatgatt 14884356  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 14890072 - 14890113
Alignment:
Q  401 ctatttatagagaatagatgacaactcagcttccaatattta 442  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14890072 ctatttatagagaatagatgacaactcaacttccaatattta 14890113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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