View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18636_low_8 (Length: 475)

Name: NF18636_low_8
Description: NF18636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18636_low_8
NF18636_low_8
[»] chr3 (26 HSPs)
chr3 (251-458)||(383742-383948)
chr3 (14-92)||(383664-383742)
chr3 (14-89)||(44647834-44647909)
chr3 (18-89)||(50363089-50363160)
chr3 (18-91)||(54425927-54426000)
chr3 (14-90)||(51263140-51263216)
chr3 (18-89)||(35055848-35055919)
chr3 (27-89)||(20945273-20945335)
chr3 (18-91)||(22659642-22659715)
chr3 (18-87)||(28243821-28243890)
chr3 (17-82)||(39931942-39932007)
chr3 (14-91)||(48901488-48901565)
chr3 (14-91)||(48903054-48903131)
chr3 (17-89)||(31474485-31474557)
chr3 (18-89)||(831333-831404)
chr3 (18-85)||(2421146-2421213)
chr3 (18-89)||(12077716-12077787)
chr3 (18-89)||(13084331-13084402)
chr3 (18-89)||(26517188-26517259)
chr3 (18-89)||(54555897-54555968)
chr3 (27-89)||(41308749-41308811)
chr3 (14-86)||(38668499-38668572)
chr3 (17-57)||(8818132-8818172)
chr3 (18-86)||(14645865-14645933)
chr3 (41-89)||(31531101-31531149)
chr3 (17-89)||(33287927-33287999)
[»] chr4 (24 HSPs)
chr4 (14-91)||(5168038-5168115)
chr4 (18-89)||(16070494-16070565)
chr4 (14-93)||(37625092-37625171)
chr4 (18-89)||(52226082-52226153)
chr4 (18-90)||(29584957-29585029)
chr4 (14-89)||(20291399-20291474)
chr4 (18-89)||(22750813-22750884)
chr4 (18-89)||(25477288-25477359)
chr4 (18-89)||(39197005-39197076)
chr4 (14-89)||(41459646-41459721)
chr4 (18-89)||(43509144-43509215)
chr4 (18-89)||(43800871-43800942)
chr4 (18-91)||(13096511-13096584)
chr4 (18-91)||(20262363-20262436)
chr4 (14-91)||(20293806-20293883)
chr4 (22-89)||(21121034-21121101)
chr4 (18-89)||(38136418-38136489)
chr4 (18-89)||(40411314-40411385)
chr4 (17-91)||(52676082-52676157)
chr4 (18-83)||(14602632-14602697)
chr4 (18-91)||(20185625-20185698)
chr4 (18-91)||(20540034-20540106)
chr4 (20-89)||(56217024-56217093)
chr4 (17-88)||(3684159-3684231)
[»] chr5 (21 HSPs)
chr5 (14-89)||(4857464-4857539)
chr5 (18-89)||(5845239-5845310)
chr5 (14-86)||(16088-16160)
chr5 (18-89)||(25017644-25017715)
chr5 (18-89)||(600828-600899)
chr5 (18-89)||(8717929-8718000)
chr5 (18-89)||(20946150-20946221)
chr5 (14-93)||(27587897-27587976)
chr5 (27-92)||(10934078-10934143)
chr5 (29-89)||(11980790-11980850)
chr5 (21-89)||(29866255-29866323)
chr5 (14-85)||(4738689-4738760)
chr5 (18-89)||(40979182-40979253)
chr5 (14-72)||(19089008-19089066)
chr5 (17-59)||(41521250-41521292)
chr5 (18-91)||(3558995-3559068)
chr5 (18-91)||(36177355-36177428)
chr5 (22-91)||(36750744-36750813)
chr5 (18-91)||(38972095-38972168)
chr5 (18-91)||(42644446-42644519)
chr5 (33-89)||(1558084-1558140)
[»] chr2 (20 HSPs)
chr2 (14-93)||(11459212-11459291)
chr2 (17-89)||(2917072-2917144)
chr2 (14-89)||(2654360-2654435)
chr2 (18-90)||(17250931-17251003)
chr2 (18-89)||(23464746-23464817)
chr2 (18-89)||(41665773-41665844)
chr2 (18-87)||(34330065-34330134)
chr2 (17-89)||(42250850-42250922)
chr2 (18-89)||(375316-375387)
chr2 (14-89)||(16808794-16808869)
chr2 (14-89)||(16848075-16848150)
chr2 (18-89)||(28190661-28190732)
chr2 (18-89)||(44424658-44424729)
chr2 (18-89)||(45214788-45214859)
chr2 (24-90)||(40533128-40533194)
chr2 (18-87)||(24774928-24774997)
chr2 (18-91)||(37355099-37355172)
chr2 (17-89)||(3326786-3326858)
chr2 (37-89)||(13534487-13534539)
chr2 (14-82)||(44421508-44421576)
[»] chr1 (21 HSPs)
chr1 (14-89)||(291605-291680)
chr1 (18-93)||(4817872-4817947)
chr1 (18-93)||(4829672-4829747)
chr1 (14-91)||(47643598-47643675)
chr1 (18-91)||(51390505-51390578)
chr1 (27-91)||(34012558-34012622)
chr1 (14-89)||(8984631-8984706)
chr1 (18-89)||(23982562-23982633)
chr1 (18-89)||(32152220-32152291)
chr1 (41-90)||(1596220-1596269)
chr1 (18-90)||(35365953-35366025)
chr1 (18-93)||(51997017-51997093)
chr1 (18-89)||(3143465-3143536)
chr1 (18-89)||(20564837-20564908)
chr1 (18-89)||(32144373-32144444)
chr1 (14-89)||(40612929-40613004)
chr1 (18-89)||(47070931-47071002)
chr1 (18-89)||(48721838-48721909)
chr1 (39-89)||(34028471-34028521)
chr1 (27-89)||(44652831-44652893)
chr1 (18-86)||(5321996-5322064)
[»] scaffold0116 (1 HSPs)
scaffold0116 (14-87)||(5866-5939)
[»] chr6 (13 HSPs)
chr6 (14-91)||(1763872-1763949)
chr6 (17-89)||(197423-197495)
chr6 (17-89)||(3729484-3729556)
chr6 (14-89)||(31152960-31153035)
chr6 (18-89)||(31945884-31945955)
chr6 (18-89)||(16327186-16327258)
chr6 (18-89)||(16350584-16350656)
chr6 (18-89)||(15981857-15981928)
chr6 (18-89)||(31536075-31536146)
chr6 (14-91)||(29643979-29644055)
chr6 (18-91)||(30465938-30466011)
chr6 (24-89)||(31039215-31039280)
chr6 (37-89)||(30248944-30248996)
[»] chr7 (19 HSPs)
chr7 (14-90)||(21388301-21388377)
chr7 (18-89)||(1324771-1324842)
chr7 (14-89)||(21809618-21809693)
chr7 (18-89)||(33181358-33181429)
chr7 (18-89)||(37048098-37048169)
chr7 (27-89)||(26200939-26201001)
chr7 (14-75)||(6376118-6376179)
chr7 (17-90)||(42983584-42983657)
chr7 (18-89)||(27162874-27162946)
chr7 (18-86)||(43601139-43601207)
chr7 (18-89)||(4089471-4089542)
chr7 (14-89)||(10408539-10408614)
chr7 (18-89)||(13907714-13907785)
chr7 (18-89)||(40263774-40263845)
chr7 (27-89)||(28038859-28038921)
chr7 (18-91)||(2276546-2276619)
chr7 (14-58)||(23876096-23876140)
chr7 (14-50)||(26830132-26830168)
chr7 (41-89)||(39102750-39102798)
[»] chr8 (23 HSPs)
chr8 (18-89)||(36309568-36309639)
chr8 (14-89)||(12762901-12762976)
chr8 (14-89)||(23399749-23399824)
chr8 (18-89)||(30262510-30262581)
chr8 (18-89)||(38761330-38761401)
chr8 (14-89)||(43191449-43191524)
chr8 (32-89)||(7727321-7727378)
chr8 (18-91)||(45185237-45185310)
chr8 (18-89)||(2562701-2562773)
chr8 (14-89)||(27624-27699)
chr8 (18-89)||(24276529-24276600)
chr8 (18-89)||(31746377-31746448)
chr8 (18-85)||(36437564-36437631)
chr8 (18-89)||(40517803-40517874)
chr8 (18-80)||(45183842-45183904)
chr8 (18-91)||(885524-885597)
chr8 (20-89)||(25888660-25888729)
chr8 (26-91)||(33385317-33385382)
chr8 (18-91)||(40337161-40337234)
chr8 (18-91)||(41087037-41087110)
chr8 (18-90)||(3113504-3113576)
chr8 (18-86)||(40790851-40790919)
chr8 (21-89)||(45203824-45203892)
[»] scaffold0699 (1 HSPs)
scaffold0699 (18-86)||(7640-7708)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-89)||(99788-99859)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-83)||(214681-214746)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-89)||(61253-61325)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 5e-88; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 383742 - 383948
Alignment:
Q  251 aatgtacaaaattcaaaagaatattttta-tttttaagttattaacatatgtctttaaaacacaagttagttagcatgacctatttaataattaataaac 349  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  383742 aatgtacaaaatttaaaagaatatttttactttttaagttattaagatatgtttttaaaacacaagttagttagcatgacctatttaataatcaataaac 383841  T
Q  350 aaagaaactggcttttcaaaagcagaaaagggtcatacactatttttgtttgtttttgaggtaaggtacatacttattgctggctaaatttgggggacca 449  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  383842 aaagaaactggcttttcaaaagc-taaaagggtcatacactatttttgtttgtttttgaggtaaggtacatacttattgctggctaaa-ttgggggacca 383939  T
Q  450 agcaataag 458  Q
    |||||||||    
T  383940 agcaataag 383948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 383664 - 383742
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaaga 92  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  383664 tactaaattatcatttgtttatatgtgtatttaatttaacttttcacattctaatacaagttagtagtattaattaaga 383742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 44647834 - 44647909
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||| |||||||||||  ||||||||||||    
T  44647834 tactaaattgtcatttgtttatatgtgtatttaatttgacttttcatattgtaatacaagttgatagtattaatta 44647909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 50363089 - 50363160
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  50363089 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 50363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 54426000 - 54425927
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||||||| |||||| ||||||| |||||| ||| |||  |  |||||||||||||||||||    
T  54426000 aaattgtcatttgtttatatgtgtattaaatttaatttttcatattttaagtctggttagtagtattaattaag 54425927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 51263140 - 51263216
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| |||  || | ||||||||||||||||||||    
T  51263140 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttaaagataagttagtagtattaattaa 51263216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 35055848 - 35055919
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||||| || ||| |||||| ||||| |||||| | |||  ||||||||||||||||||||||||    
T  35055848 aaattgtcatttgcttgtatgtgtattaaatttgactttttatatttcaatacaagttagtagtattaatta 35055919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 20945335 - 20945273
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||| ||| |||||| ||||| |||||||| ||| ||| |||||||||||||||||||||    
T  20945335 tttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagtagtattaatta 20945273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22659642 - 22659715
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||| || ||||||| ||| |||||| |||||||||||||| |||  || |||| ||||||||||||||||||    
T  22659642 aaattatcttttgtttgtatgtgtattaaatttaacttttcatatttcaaaacaaattagtagtattaattaag 22659715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28243821 - 28243890
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaat 87  Q
    |||||||| ||||||||| | |||||| |||||||||||| | |||  |||| |||||||||||||||||    
T  28243821 aaattgtcctttgtttatgtgtgtattaaatttaactttttatatttcaatataagttagtagtattaat 28243890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 39931942 - 39932007
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagta 82  Q
    ||||||||||||||||| ||| |||||| ||||| | |||||| ||| ||| ||||||||||||||    
T  39931942 taaattgtcatttgtttgtatgtgtattaaattttagttttcatattttaagacaagttagtagta 39932007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 48901565 - 48901488
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||| | ||| ||| | || ||| ||||||||||||||    
T  48901565 tactaaattgtcatttgtttgtatatatattaaatttgacttttaatattttaagaaaaattaatagtattaattaag 48901488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 48903131 - 48903054
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||| | |||  || | || ||||||||||||||||||    
T  48903131 tactaaattgtcatttgtttgtatatatattaaatttgacttttaatatttcaagaaaaattagtagtattaattaag 48903054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 31474485 - 31474557
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| |||||||||| ||| |||||| ||||||  |||||| ||| ||| |||| ||||||||||||||||    
T  31474485 taaattatcatttgtttgtatgtgtattaaatttagtttttcaaattttaagacaaattagtagtattaatta 31474557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 831404 - 831333
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||||||| |||||| ||||| | |||||| |||  |||| |||||| ||||||||||||    
T  831404 aaattgtcctttgtttatatgtgtattaaatttgatttttcatatttcaatataagttattagtattaatta 831333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 2421146 - 2421213
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtatta 85  Q
    |||||||||||||||| ||| | |||| ||||| |||||| | |||| || |||||||||||||||||    
T  2421146 aaattgtcatttgtttgtatgtatattaaatttgactttttatattcaaagacaagttagtagtatta 2421213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 12077787 - 12077716
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||| ||| |||||||||||    
T  12077787 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagatagaagtattaatta 12077716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 13084402 - 13084331
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| || ||||||| ||| |||||| ||||| |||||||| ||| ||| |||||||||||| ||||||||    
T  13084402 aaattatcttttgtttgtatgtgtattaaatttgacttttcaaattttaacacaagttagtagcattaatta 13084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 26517259 - 26517188
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||| ||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  26517259 aaattgtcctttatttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 26517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 54555968 - 54555897
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| |||||||||||||| | |||| | |||||||||||| | | ||| |||| ||||||||||||||||    
T  54555968 aaattatcatttgtttatatgtatattaattttaacttttcatactttaagacaaattagtagtattaatta 54555897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 41308811 - 41308749
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||| |||||| |||||  ||||||| |||  || |||||||||||||||||||||    
T  41308811 tttgtttatatgtgtattaaatttggcttttcatatttcaagacaagttagtagtattaatta 41308749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 38668572 - 38668499
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatac-aagttagtagtattaa 86  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||  |||| || || || |||||||||||||    
T  38668572 tactaaattgtcatttatttatatgtgtatttaatttgtcttttcgtattccaaaacaaaattagtagtattaa 38668499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 8818172 - 8818132
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaactttt 57  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  8818172 taaattgtcatttgtttatatatatattaaatttgactttt 8818132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 14645933 - 14645865
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    ||||||| |||||||| ||| |||||| ||||| | |||||| |||  || ||||||||||||||||||    
T  14645933 aaattgttatttgtttgtatgtgtattaaatttgatttttcaaatttcaagacaagttagtagtattaa 14645865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 31531149 - 31531101
Alignment:
Q  41 tatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||| |||||||||||||| |||  || |||||||||||||||||||||    
T  31531149 tattaaatttaacttttcaaatttcaagacaagttagtagtattaatta 31531101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 33287927 - 33287999
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| ||||||| | | |||||| ||||| |||||| | |||  || |||||||||||||||||||||    
T  33287927 taaattgtcctttgtttgtttgtgtattaaatttgactttttatatttcaagacaagttagtagtattaatta 33287999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 5168038 - 5168115
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||| |||  |||||||| |||||||||||||||||    
T  5168038 tactaaattgtcatttgtttgtatgtgtattaaatttaatttttcatatttcaatacaagctagtagtattaattaag 5168115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 16070494 - 16070565
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| || |||||||||||||||||| ||||| |||||||| |||  ||||||||||||||||||||||||    
T  16070494 aaattatcttttgtttatatatgtattaaatttgacttttcatatttcaatacaagttagtagtattaatta 16070565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 37625171 - 37625092
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaagag 93  Q
    ||||||||| |||||||||||||| |||||| ||||| |||||||| |||  || |  ||||||||||||||||||||||    
T  37625171 tactaaattatcatttgtttatatgtgtattaaatttgacttttcatatttcaagattagttagtagtattaattaagag 37625092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 52226082 - 52226153
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||||||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  52226082 aaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 52226153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 29584957 - 29585029
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||||||||||| ||| |||||| ||||| |||||| | ||| ||| |||||||| |||||||||||||    
T  29584957 aaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaagacaagttaatagtattaattaa 29585029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 20291399 - 20291474
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| |||||||||| ||| |||||| ||||| |||||||| |||  || | |||||||||||||||||||    
T  20291399 tactaaattatcatttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagtattaatta 20291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22750884 - 22750813
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || |||| ||||||||||||||||    
T  22750884 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaacttagtagtattaatta 22750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 25477288 - 25477359
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  25477288 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 25477359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 39197076 - 39197005
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| ||| ||| ||||||||||| |||||||||    
T  39197076 aaattgtcttttgtttgtatgtgtattaaatttgacttttcaaattttaaaacaagttagtattattaatta 39197005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 41459646 - 41459721
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| ||| ||||||| |||||| ||||| |||||||| |||  |  |||||||||||||||||||||    
T  41459646 tactaaattgtcttttatttatatgtgtattaaatttgacttttcatatttcatgacaagttagtagtattaatta 41459721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 43509144 - 43509215
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| |||||||||||||| |||  || |||| ||||||||||||||||    
T  43509144 aaattgtcttttgtttgtatgtgtattaaatttaacttttcaaatttcaagacaaattagtagtattaatta 43509215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 43800871 - 43800942
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||||||||| |||||||| |||  || ||||||| |||||||||||||    
T  43800871 aaattgtcctttgtttgtatgtgtatttaatttgacttttcatatttcaagacaagttggtagtattaatta 43800942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13096584 - 13096511
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||| ||| || ||  || ||||||||||| ||| ||| |||||||| ||||||||||||||    
T  13096584 aaattgtcatttgtttctatgtgcataaaaattaacttttcatattttaagacaagttactagtattaattaag 13096511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20262436 - 20262363
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||||| |||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||||    
T  20262436 aaattgttatttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagatagtagtattaattaag 20262363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 20293806 - 20293883
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||| ||||||| ||||||| ||| |||||| ||||| ||| |||| |||  ||||||||||||||||||||| ||||    
T  20293806 tactgaattgtcttttgtttgtatttgtattaaatttgactattcatatttcaatacaagttagtagtattaagtaag 20293883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 21121034 - 21121101
Alignment:
Q  22 tgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||| ||||||| |||  ||||| |||||||||||| | ||| ||| |||||||||||||||||||||    
T  21121034 tgtcttttgtttgtatgcgtattaaatttaactttttatattttaagacaagttagtagtattaatta 21121101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 38136418 - 38136489
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||| ||||||| | |||||| |||  ||  ||||||||||||||||||||    
T  38136418 aaattgtcatttgtttgtatgtgtaattaatttgatttttcatatttcaaggcaagttagtagtattaatta 38136489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40411385 - 40411314
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| |||||||||||||| |||  || ||||| || || |||||||||    
T  40411385 aaattgtcatttgtttgtatgtgtattaaatttaacttttcatatttcaagacaagataataatattaatta 40411314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 52676082 - 52676157
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacatt-ctaatacaagttagtagtattaattaag 91  Q
    ||||||||| ||| ||||||| |||||| ||||| |||||||| ||| | || |||||||| ||||||||||||||    
T  52676082 taaattgtcctttatttatatgtgtattaaatttgacttttcaaatttcaaagacaagttaatagtattaattaag 52676157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 14602697 - 14602632
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtat 83  Q
    |||||||||||||||| ||| |||||| ||||| |||||| | ||| ||| | |||||||||||||    
T  14602697 aaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaagataagttagtagtat 14602632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20185698 - 20185625
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||| | ||||||| ||| |||||| ||||| |||||||| |||  || |||| ||||||||||||||||||    
T  20185698 aaattgccttttgtttgtatttgtattaaatttgacttttcatatttcaagacaaattagtagtattaattaag 20185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20540034 - 20540106
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||  ||||||| ||| |||||| ||||| ||||| || ||| |||||||||||| ||||||||||||||    
T  20540034 aaattgttctttgtttgtatgtgtattaaatttgacttt-catattttaatacaagttactagtattaattaag 20540106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 56217093 - 56217024
Alignment:
Q  20 attgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| ||||||| ||| |||||| |||||||||||||| |||  || | ||| |||||||||||||||    
T  56217093 attgtcctttgtttgtatttgtattaaatttaacttttcatatttcaagataagatagtagtattaatta 56217024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3684231 - 3684159
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaac-ttttcacattctaatacaagttagtagtattaatt 88  Q
    |||||| |||||||||||||| | |||| |||||||| |||||| |||  || | ||||||||||||||||||    
T  3684231 taaattatcatttgtttatatgtatattaaatttaacgttttcatatttcaagataagttagtagtattaatt 3684159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 4857539 - 4857464
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||| ||| ||| | |||||||||||||||||||    
T  4857539 tactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaagataagttagtagtattaatta 4857464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 5845239 - 5845310
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  ||||||||||||||||||||||||    
T  5845239 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaatacaagttagtagtattaatta 5845310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 16160 - 16088
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    |||||||||||| ||||||| ||| |||||| ||||| ||||||||||||  || ||||||||||||||||||    
T  16160 tactaaattgtcctttgtttgtatttgtattaaatttgacttttcacatttcaagacaagttagtagtattaa 16088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 25017715 - 25017644
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| ||| ||| |||||||| ||||||||||||    
T  25017715 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttaatagtattaatta 25017644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 600828 - 600899
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| |||||||||| ||||| | |||| | ||| ||| ||||||||||| |||||||||    
T  600828 aaattgtcatttgtttgtatatgtattaaatttgattttttatattttaagacaagttagtaatattaatta 600899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 8718000 - 8717929
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| |||||||||| ||||| |||||||| |||  || ||||||| ||| |||||||||    
T  8718000 aaattgtcatttgtttgtatatgtattaaatttgacttttcatatttcaagacaagttcgtattattaatta 8717929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 20946150 - 20946221
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||| ||||||    
T  20946150 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagtactaatta 20946221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 27587897 - 27587976
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaagag 93  Q
    |||||||||||| ||||| | ||| |||||| ||||| | |||||| |||  |||||||||||||||||||| |||||||    
T  27587897 tactaaattgtcctttgtatgtatgtgtattaaatttgatttttcaaatttcaatacaagttagtagtattatttaagag 27587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 10934078 - 10934143
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaaga 92  Q
    ||||||| ||| |||||| ||||| |||||||| |||  |||||||||||||| ||||||||||||    
T  10934078 tttgtttgtatgtgtattaaatttgacttttcatatttcaatacaagttagtaatattaattaaga 10934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 11980790 - 11980850
Alignment:
Q  29 tgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| |||||| ||||| |||||||| ||| ||| ||| |||||||||||||||||    
T  11980790 tgtttatatgtgtattaaatttgacttttcatattttaagacatgttagtagtattaatta 11980850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 29866255 - 29866323
Alignment:
Q  21 ttgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  29866255 ttgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 29866323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 4738689 - 4738760
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtatta 85  Q
    |||||||||| | ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||    
T  4738689 tactaaattgacctttgtttttatgtgtattaaatttgacttttcatatttcaagacaagttagtagtatta 4738760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40979253 - 40979182
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  40979253 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttaaagacaagatagtagtattaatta 40979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 19089066 - 19089008
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaa 72  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||| ||| ||| ||||    
T  19089066 tactaaattgtcatttgtttgtatttgtattaaatttgacttttcatattttaaaacaa 19089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 41521250 - 41521292
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttca 59  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||    
T  41521250 taaattgtcatttgtttatatgtgtattaaatttgacttttca 41521292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3559068 - 3558995
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || | |||||||||||||| ||||||    
T  3559068 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagtatttattaag 3558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36177355 - 36177428
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||   ||||||||||||||||    
T  36177355 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaaaaaagtagtattaattaag 36177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 36750813 - 36750744
Alignment:
Q  22 tgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||| ||||||||||| |||||| ||||| |||||| | |||  || ||||||||| |||||||||||||    
T  36750813 tgtcctttgtttatatgtgtattaaatttgactttttatatttcaaaacaagttagcagtattaattaag 36750744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38972168 - 38972095
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| |||||| ||||| |||||| | |||  || | |||||||||||||||||||||    
T  38972168 aaattgtcctttgtttgtatgtgtattaaatttgactttttatatttcaagataagttagtagtattaattaag 38972095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 42644519 - 42644446
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||| ||| | |||| |||||  ||||||| |||  || |||||||||| ||||||||||||    
T  42644519 aaattgtcatttgtttgtatgtatattaaatttgtcttttcatatttcaagacaagttagttgtattaattaag 42644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 1558084 - 1558140
Alignment:
Q  33 tatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| |||||||||||||| ||| ||| | |||||| || |||||||||    
T  1558084 tatatatgtattaaatttaacttttcatattttaaaataagttaataatattaatta 1558140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 11459212 - 11459291
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaagag 93  Q
    |||||||||||| ||||||| |||||||||| ||||| | |||||| |||  || |||||||||||||||||||||||||    
T  11459212 tactaaattgtcctttgtttgtatatgtattaaatttgatttttcaaatttcaagacaagttagtagtattaattaagag 11459291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 2917144 - 2917072
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| ||||||| ||| |||||| |||||||||||| | ||| ||| |||||||||||||||||||||    
T  2917144 taaattgtcttttgtttgtatgtgtattaaatttaactttttatattttaagacaagttagtagtattaatta 2917072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 2654360 - 2654435
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| ||||||||||| |||||||||||| | |||||| ||| ||| | |||||| ||||||||||||    
T  2654360 tactaaattgtcttttgtttatatgtgtatttaatttgatttttcatattttaagataagttaatagtattaatta 2654435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 17251003 - 17250931
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||||||||||| ||| ||||||||| || |||||||| |||  || ||||| ||||||||||||||||    
T  17251003 aaattgtcatttgtttgtatgtgtatttaaattgacttttcatatttcaagacaagatagtagtattaattaa 17250931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23464746 - 23464817
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||| ||| |||||||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  23464746 aaattgtcctttatttgtatatgtattaaatttgacttttcatatttcaaaacaagttagtagtattaatta 23464817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 41665773 - 41665844
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| |||||||||||||| |||  || |||||||| ||||||||||||    
T  41665773 aaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaagacaagttaatagtattaatta 41665844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 34330065 - 34330134
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaat 87  Q
    |||||||| ||||||| ||| |||||| |||||||||||||| |||  || ||||| |||||||||||||    
T  34330065 aaattgtcctttgtttgtatgtgtattaaatttaacttttcatatttcaagacaagatagtagtattaat 34330134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 42250922 - 42250850
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||||| ||||||| |||||| ||||| |||||| | |||  || |||||||| ||||||||||||    
T  42250922 taaattgtcatttatttatatgtgtattaaatttgactttttatatttcaagacaagttaatagtattaatta 42250850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 375387 - 375316
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| | |||||| |||  || |||||||||||||||| ||||    
T  375387 aaattgtcatttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagtattgatta 375316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 16808869 - 16808794
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| | |||| || |||| |||||| |||  || ||||||||||||||| |||||    
T  16808869 tactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaagacaagttagtagtataaatta 16808794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 16848150 - 16848075
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| | |||| || |||| |||||| |||  || ||||||||||||||| |||||    
T  16848150 tactaaattgtcatttgtttgtatgtatattaaaattaatttttcatatttcaagacaagttagtagtataaatta 16848075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 28190661 - 28190732
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| |||||||||| | ||||| |||||| |||  || |||| ||||||||| ||||||    
T  28190661 aaattgtcatttgtttgtatatgtattaagtttaatttttcatatttcaagacaatttagtagtaataatta 28190732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 44424658 - 44424729
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  44424658 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 44424729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 45214788 - 45214859
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| | ||||||| ||| |||||| |||||||||||||| ||| ||| | || ||||||||||||||||    
T  45214788 aaattgccctttgtttgtatgtgtattaaatttaacttttcatattttaagataaattagtagtattaatta 45214859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 40533128 - 40533194
Alignment:
Q  24 tcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||| ||||||| |||||||||||| |||||| | ||| ||| |  |||||||||||||||||||    
T  40533128 tcatttatttatatttgtatttaatttgactttttatattttaagaagagttagtagtattaattaa 40533194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 24774928 - 24774997
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaat 87  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||| ||||    
T  24774928 aaattgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtactaat 24774997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 37355099 - 37355172
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||| ||  |||||||||||||    
T  37355099 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagataaaagtattaattaag 37355172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3326786 - 3326858
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| ||||||||||| |||||  |||||||||||||| |||  || | ||  |||||||||||||||    
T  3326786 taaattgtcctttgtttatatgtgtataaaatttaacttttcatatttcaagataacgtagtagtattaatta 3326858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 13534487 - 13534539
Alignment:
Q  37 tatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  13534487 tatgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 13534539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44421508 - 44421576
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagta 82  Q
    |||||||||||||||||||| ||| |||||| |||||   |||| | ||| ||| ||||||||||||||    
T  44421508 tactaaattgtcatttgtttgtatgtgtattaaatttgtttttttaaattttaagacaagttagtagta 44421576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 291680 - 291605
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| |||||| |||||||||||| | ||| ||| | |||||||||||||||||||    
T  291680 tactaaattgtcatttgtttgtatttgtattaaatttaactttttatattttaagataagttagtagtattaatta 291605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 4817947 - 4817872
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaagag 93  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||||||    
T  4817947 aaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagtattaattaagag 4817872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 4829747 - 4829672
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaagag 93  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||||||    
T  4829747 aaattgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagtattaattaagag 4829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 47643598 - 47643675
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||| |||||||  || |||||| ||||| |||||||| |||  || |||||||||||||||||||||||    
T  47643598 tactaaattgtcctttgtttgcatgtgtattaaatttgacttttcaaatttcaagacaagttagtagtattaattaag 47643675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 51390578 - 51390505
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||||||||||| |||||||||    
T  51390578 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagttttaattaag 51390505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 34012558 - 34012622
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||||||||| |||||| |||||||||||||| |||  || ||||| |||||||||||||||||    
T  34012558 tttgtttatatgtgtattaaatttaacttttcatatttcaagacaagatagtagtattaattaag 34012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 8984706 - 8984631
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||| |||  || | || ||||||||||||||||    
T  8984706 tactaaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagataaattagtagtattaatta 8984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23982633 - 23982562
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| ||||||||| |||||||||| ||||| |||||||| |||  || | |||||||||||||||||||    
T  23982633 aaattgacatttgtttgtatatgtattaaatttgacttttcatatttcaagataagttagtagtattaatta 23982562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 32152220 - 32152291
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||| |||||||| ||| |||||| ||||| |||||||| ||| ||| | |||||||||||||||||||    
T  32152220 aaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaagataagttagtagtattaatta 32152291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 1596269 - 1596220
Alignment:
Q  41 tatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||| ||||||||||||||||||| || ||||||| ||||||||||||||    
T  1596269 tattgaatttaacttttcacattccaaaacaagttggtagtattaattaa 1596220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 35366025 - 35365953
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| ||| ||| ||||||||  ||||||||||||    
T  35366025 aaattgtcttttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttaacagtattaattaa 35365953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 51997017 - 51997093
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacatt-ctaatacaagttagtagtattaattaagag 93  Q
    |||| ||| ||||||| ||| |||||| ||||| |||||||| ||| | || |||||||||||||||||||||||||    
T  51997017 aaatcgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaaagacaagttagtagtattaattaagag 51997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 3143465 - 3143536
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  3143465 aaattgtcttttgtttttatgtgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 3143536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 20564837 - 20564908
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| |||||||  || |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  20564837 aaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 20564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 32144373 - 32144444
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||  ||||| |||||||| ||| ||| |||||||| || |||||||||    
T  32144373 aaattgtcatttgtttgtatgtgtataaaatttgacttttcatattttaagacaagttaataatattaatta 32144444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 40613004 - 40612929
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| |  |||||||| || |||||||||||| |||||||| |||  | || |||||||||||||||||||    
T  40613004 tactaaattattctttgtttaaatgtgtatttaatttgacttttcatatttcattataagttagtagtattaatta 40612929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 47071002 - 47070931
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| |||  ||||| ||||| | |||||| |||  || |||||||||||||||||||||    
T  47071002 aaattgtcatttgtttgtatgcgtattaaatttgatttttcatatttcaagacaagttagtagtattaatta 47070931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 48721909 - 48721838
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  48721909 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 48721838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 34028521 - 34028471
Alignment:
Q  39 tgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| |||||||| |||| ||  ||||||||||||||||||||    
T  34028521 tgtatttaatttgacttttcatattccaaggcaagttagtagtattaatta 34028471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 44652893 - 44652831
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  44652893 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagtattaatta 44652831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 5322064 - 5321996
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    ||||||| |||||||| |||||||||| || || |||||||| |||  || ||||| ||||||||||||    
T  5322064 aaattgttatttgtttgtatatgtattaaaattgacttttcatatttcaagacaagatagtagtattaa 5321996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 5939 - 5866
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaat 87  Q
    |||||||||||  |||||| |||| |||||||||||| |||||||| | | |||||||||||||||||||||||    
T  5939 tactaaattgttctttgttcatatgtgtatttaatttgacttttcataatttaatacaagttagtagtattaat 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 1763872 - 1763949
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||||    
T  1763872 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagtattaattaag 1763949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 197495 - 197423
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||||||||| ||| |||||| ||||||| ||||   ||| ||| |||||||||||||||||||||    
T  197495 taaattgtcatttgtttgtatgtgtattaaatttaattttttcaattttaagacaagttagtagtattaatta 197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3729484 - 3729556
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||||||||| ||| |||||| ||||||||||| || |||  || ||||||||||| |||||||||    
T  3729484 taaattgtcatttgtttgtatgtgtattaaatttaactttacatatttcaagacaagttagtaatattaatta 3729556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 31153035 - 31152960
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||| |||||||| ||| |||||| ||||| |||||||| ||| ||| |||||||| || |||||||||    
T  31153035 tactaaattgttatttgtttgtatgtgtattaaatttgacttttcatattttaaaacaagttaataatattaatta 31152960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 31945955 - 31945884
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||||||| |||||| ||||| ||||| || |||  || |||||||||||||||||||||    
T  31945955 aaattgtcgtttgtttatatgtgtattaaatttgactttacatatttcaagacaagttagtagtattaatta 31945884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 16327186 - 16327258
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagtta-gtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| |||||||||||||| |||  || ||||||||  ||||||||||||    
T  16327186 aaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaagacaagttatttagtattaatta 16327258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 16350584 - 16350656
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagtta-gtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| |||||||||||||| |||  || ||||||||  ||||||||||||    
T  16350584 aaattgtcatttgtttgtatttgtattaaatttaacttttcatatttcaagacaagttatttagtattaatta 16350656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 15981857 - 15981928
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||||| |||| ||| ||| || |||||||||||||| |||  || |||||||| ||||||||||||    
T  15981857 aaattgtcattagtttgtatgtgtcttaaatttaacttttcatatttcaagacaagttaatagtattaatta 15981928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 31536075 - 31536146
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| || ||||||||||| |||||| ||||| |||||||| |||  || | |||||||||||||||||||    
T  31536075 aaattatcttttgtttatatgtgtattaaatttgacttttcatatttcaagataagttagtagtattaatta 31536146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 29643979 - 29644055
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||| |||||| ||||||| ||| |||||||||||| | |||||| |||| ||| ||| ||| ||||||||||||||    
T  29643979 tactatattgtcttttgtttgtat-tgtatttaatttgatttttcatattccaatgcaaattattagtattaattaag 29644055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30466011 - 30465938
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||| || ||||||| ||| |||||| ||||| |||||||| |||  || | |||||||||||||||||||||    
T  30466011 aaattatcttttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagtattaattaag 30465938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 31039215 - 31039280
Alignment:
Q  24 tcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||| ||| || ||||||||| |||||||| |||  || |||||||||||||||| ||||    
T  31039215 tcatttgtttgtatgtgcatttaatttgacttttcatatttcaagacaagttagtagtattgatta 31039280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 30248944 - 30248996
Alignment:
Q  37 tatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  30248944 tatgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 30248996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21388301 - 21388377
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| ||| ||| | ||||||||||||||||||||    
T  21388301 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcaaattttaagataagttagtagtattaattaa 21388377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 1324771 - 1324842
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  1324771 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 1324842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 21809693 - 21809618
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  21809693 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagtattaatta 21809618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 33181358 - 33181429
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| |||||||||||||| | | ||| ||||||||||| |||||||||    
T  33181358 aaattgtcatttgtttgtatgtgtattaaatttaacttttcatactttaagacaagttagtaatattaatta 33181429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 37048098 - 37048169
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||||||| |||| |||  ||||||||||||||||||||||||    
T  37048098 aaattgtcctttgtttgtatgtgtattaaatttaactattcatatttcaatacaagttagtagtattaatta 37048169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 26201001 - 26200939
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||| ||| |||||| |||||||||||||| ||| ||| |||||||||||||||||||||    
T  26201001 tttgtttgtatgtgtattaaatttaacttttcatattttaaaacaagttagtagtattaatta 26200939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 6376179 - 6376118
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagtt 75  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||| ||| ||| |||||||    
T  6376179 tactaaattgtcatttgtttgtatgtgtattaaatttaacttttcaaattttaagacaagtt 6376118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 42983657 - 42983584
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    ||||||||| | ||||| ||| |||||| ||||| |||||||| |||  || ||||||||||||||||||||||    
T  42983657 taaattgtcttatgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaattaa 42983584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 27162946 - 27162874
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaac-ttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| |||||||| |||||| |||  || |||||||| ||||||||||||    
T  27162946 aaattgtcatttgtttgtatgtgtattaaatttaactttttcatatttcaagacaagttaatagtattaatta 27162874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 43601207 - 43601139
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    |||||||| ||||||||||| |||||| ||||| |||||||| |||  || ||||||||||| ||||||    
T  43601207 aaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagtaatattaa 43601139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 4089542 - 4089471
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| || ||||||| |||||||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  4089542 aaattatcttttgtttgtatatgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 4089471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 10408614 - 10408539
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| ||||| ||||||| ||| |||||| ||||| | |||||| |||  ||| ||||||||||||||||||||    
T  10408614 tactaatttgtcctttgtttgtatgtgtattaaatttgatttttcatatttcaatgcaagttagtagtattaatta 10408539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 13907785 - 13907714
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| | || | ||||| |||||||| |||  || |||||||||||||||||||||    
T  13907785 aaattgtcatttgtttgtatgtttaataaatttgacttttcatatttaaagacaagttagtagtattaatta 13907714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 40263774 - 40263845
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || | ||| |||||||||||||||    
T  40263774 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagataagatagtagtattaatta 40263845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 28038921 - 28038859
Alignment:
Q  27 tttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||| ||| |||||| |||||||||||||| |||  || ||||||||| |||||||||||    
T  28038921 tttgtttgtatttgtattaaatttaacttttcatatttcaagacaagttagcagtattaatta 28038859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 2276619 - 2276546
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || | |||||| ||||||||||||||    
T  2276619 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaagataagttactagtattaattaag 2276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 23876096 - 23876140
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttc 58  Q
    |||||||||||| ||||||| ||| |||||| |||||||||||||    
T  23876096 tactaaattgtcttttgtttgtatgtgtattaaatttaacttttc 23876140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 26830168 - 26830132
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaattt 50  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  26830168 tactaaattatcatttgtttatatgtgtatttaattt 26830132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 39102798 - 39102750
Alignment:
Q  41 tatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||| |||||| | |||| || |||||||||||||||||||||    
T  39102798 tatttaatttgactttttatattccaagacaagttagtagtattaatta 39102750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 36309639 - 36309568
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| ||| ||| ||||||||||| |||||||||    
T  36309639 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagtattattaatta 36309568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 12762901 - 12762976
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| |||  || ||||||||||| |||||||||    
T  12762901 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtaatattaatta 12762976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 23399824 - 23399749
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||| ||||||| ||| |||||| ||||| |||||||| |||  ||  ||||||||||||||||||||    
T  23399824 tactaaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaaaccaagttagtagtattaatta 23399749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 30262581 - 30262510
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| ||| || ||| |||||||||| |||  || |||||||||||||||||||||    
T  30262581 aaattgtcatttgtttgtatgtgtcttaaatctaacttttcaaatttcaagacaagttagtagtattaatta 30262510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 38761401 - 38761330
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  || ||||| |||||||||||||||    
T  38761401 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtattaatta 38761330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 43191524 - 43191449
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||| |||  || | |||||||||| ||||||||    
T  43191524 tactaaattgtcatttgtttgtatgtgtattaaatttaaattttcatatttcaagataagttagtaggattaatta 43191449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 7727378 - 7727321
Alignment:
Q  32 ttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||| ||||||| |||| |||||||| |||| || |||||||||||||||||||||    
T  7727378 ttatatgtgtatttcatttgacttttcatattccaagacaagttagtagtattaatta 7727321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 45185310 - 45185237
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| |||||| | ||| |||||||| ||| ||| |||||||||||||||| ||||||    
T  45185310 aaattgtcctttgtttgtatgtgtattcattttgacttttcaaattttaagacaagttagtagtattgattaag 45185237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 2562773 - 2562701
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacatt-ctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| ||| |||| ||||| |||||||||||||||    
T  2562773 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatattactaagacaagatagtagtattaatta 2562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 27624 - 27699
Alignment:
Q  14 tactaaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||||||||| |||||||| ||||| | |||| | |||  || |||| ||||||| ||||||||    
T  27624 tactaaattgtcatttgtttatgtatgtattaaatttgattttttatattacaaaacaaattagtagaattaatta 27699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24276600 - 24276529
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| ||||| || |||  || ||||||||||| |||||||||    
T  24276600 aaattgtcatttgtttgtatgtgtattaaattttactttacatatttcaaaacaagttagtaatattaatta 24276529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 31746448 - 31746377
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| |||  ||  |||||||||| |||||||||    
T  31746448 aaattgtcatttgtttgtatgtgtattaaatttgacttttcatatttcaaagcaagttagtattattaatta 31746377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 36437564 - 36437631
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtatta 85  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||||||||||||||||    
T  36437564 aaattgtcctttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagtatta 36437631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 40517803 - 40517874
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| ||||||| ||| |||||| ||||| |||||| | |||  || |||||||||||||||||||||    
T  40517803 aaattgtcctttgtttgtatgtgtattaaatttgactttttaaatttcaagacaagttagtagtattaatta 40517874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 45183904 - 45183842
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtag 80  Q
    |||||||| ||||||||||| |||||| ||||| |||||||| |||  || ||||||||||||    
T  45183904 aaattgtcctttgtttatatgtgtattaaatttgacttttcaaatttgaagacaagttagtag 45183842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 885524 - 885597
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| |||||| ||||| |||||||| |||  || |||| ||||| ||||||||||||    
T  885524 aaattgtcctttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaaattagtggtattaattaag 885597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 25888660 - 25888729
Alignment:
Q  20 attgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||||||||| ||| |||||| ||||| | |||||| ||| ||| |||| |||||| |||||||||    
T  25888660 attgtcatttgtttgtatgtgtattaaatttgatttttcatattttaagacaaattagtactattaatta 25888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 33385317 - 33385382
Alignment:
Q  26 atttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||||||| | |||| ||||| |||||||  |||  || |||||||||||||||||||||||    
T  33385317 atttgtttatatgtatattaaatttgacttttcgtatttcaagacaagttagtagtattaattaag 33385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 40337234 - 40337161
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    |||||||| ||||||| ||| ||||||||| || |||||||| |||  || ||||| || ||||||||||||||    
T  40337234 aaattgtcctttgtttgtatgtgtatttaaattgacttttcatatttcaagacaagataatagtattaattaag 40337161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 41087037 - 41087110
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaag 91  Q
    ||||| || ||||||| ||| |||||| ||||| | |||||| |||  || |||||||||||||||||||||||    
T  41087037 aaattttcctttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagtattaattaag 41087110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 3113576 - 3113504
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaattaa 90  Q
    |||||||| ||||||||||| |||||| ||||||| |||||| |||  || | |||||  |||||||||||||    
T  3113576 aaattgtcttttgtttatatgtgtattaaatttaatttttcatatttcaagataagtttatagtattaattaa 3113504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 40790851 - 40790919
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    |||||||||||||||| |||||||| | ||||| ||| |||| |||  || |||| |||||||||||||    
T  40790851 aaattgtcatttgtttgtatatgtaataaatttgactattcatatttcaagacaacttagtagtattaa 40790919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 45203824 - 45203892
Alignment:
Q  21 ttgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||| ||||||| |||  ||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  45203824 ttgtcctttgtttgtatgcgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 45203892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 7640 - 7708
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaa 86  Q
    |||||||| ||||||||||| |||||| ||||| |||||||| |||  || ||||||||||| ||||||    
T  7640 aaattgtcctttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagtaatattaa 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 99859 - 99788
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    |||||||| |||||||  || |||||| ||||| |||||||| |||  || |||||||||||||||||||||    
T  99859 aaattgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaagacaagttagtagtattaatta 99788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 214681 - 214746
Alignment:
Q  18 aaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtat 83  Q
    |||||||||||||||| ||| |||||| ||||| |||||| | ||| ||| | |||||||||||||    
T  214681 aaattgtcatttgtttgtatgtgtattaaatttgactttttatattttaagataagttagtagtat 214746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 61325 - 61253
Alignment:
Q  17 taaattgtcatttgtttatatatgtatttaatttaacttttcacattctaatacaagttagtagtattaatta 89  Q
    ||||||||| ||| ||||||| |||||| |||||||||||||| | | ||| | || |||||| |||||||||    
T  61325 taaattgtcctttatttatatgtgtattaaatttaacttttcataatttaaaataaattagtaatattaatta 61253  T

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