View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18637_high_25 (Length: 210)
Name: NF18637_high_25
Description: NF18637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18637_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 36610038 - 36609858
Alignment:
| Q |
18 |
ccttcctcaccggtaataaaatataacttggttgacagttattgtttaacgaagaaagtggtggaggaaatgtgttattactatttacacctccctccac |
117 |
Q |
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| T |
36610038 |
ccttcctcaccggtaataaaatataacttggttgacagttattgtctaacgaagaaagtggtggaggaaatgtgttattactatttacacctccctccac |
36609939 |
T |
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| Q |
118 |
cgccctcatattcctcaaacaatattcatccccttgatactcattaatgttctctgtgcaagtcatcaattgtttcatctc |
198 |
Q |
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| T |
36609938 |
cgccctcgtattcctcaaacaatattcatccccttgatactcattaatgctctctgtgcaagtcatcaattgtttcatctc |
36609858 |
T |
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