View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18637_low_22 (Length: 219)
Name: NF18637_low_22
Description: NF18637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18637_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 31796690 - 31796889
Alignment:
| Q |
1 |
aattttttgtaataaaccattttcaatttccaaaaccgaatagtaaagaacatagaagaatggttttnnnnnnnngagaacatagaagaagatgacgaag |
100 |
Q |
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| T |
31796690 |
aattttttgtaataaaccattttcaatgtccaaaaccgaatagtaaagaacatagaagaatggttttaaaaaagagagaacatagaagaagatgacgaag |
31796789 |
T |
|
| Q |
101 |
gaagacgaatcaacgattcatatggagtggttattcaacaacgctctcacactcactcagagcttcatgcagattctctctcctctttggaactaacctc |
200 |
Q |
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|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
31796790 |
gaagacgaatcaacaatccatatggagtggttattcaacaacgctctcacactcactcagagcttcatgcagattctctgtcctctttggaactaacctc |
31796889 |
T |
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