View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18638_high_14 (Length: 304)

Name: NF18638_high_14
Description: NF18638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18638_high_14
NF18638_high_14
[»] chr8 (10 HSPs)
chr8 (1-304)||(36049307-36049611)
chr8 (234-304)||(35764724-35764794)
chr8 (228-304)||(28947310-28947386)
chr8 (238-304)||(2111014-2111080)
chr8 (239-300)||(43408677-43408738)
chr8 (251-304)||(8407586-8407639)
chr8 (263-304)||(14896453-14896494)
chr8 (222-267)||(29861519-29861564)
chr8 (240-304)||(4781258-4781322)
chr8 (227-295)||(37740756-37740824)
[»] chr3 (11 HSPs)
chr3 (228-304)||(9198039-9198115)
chr3 (228-304)||(33282303-33282379)
chr3 (228-297)||(11042063-11042131)
chr3 (228-304)||(20873056-20873132)
chr3 (228-304)||(37083990-37084065)
chr3 (228-304)||(32326001-32326081)
chr3 (238-304)||(32109891-32109957)
chr3 (240-302)||(54481491-54481553)
chr3 (243-304)||(38147962-38148023)
chr3 (228-296)||(22827816-22827884)
chr3 (272-304)||(28956246-28956278)
[»] scaffold0010 (1 HSPs)
scaffold0010 (218-302)||(166740-166824)
[»] chr5 (4 HSPs)
chr5 (228-304)||(2942068-2942144)
chr5 (238-304)||(28363539-28363605)
chr5 (227-301)||(31677296-31677370)
chr5 (234-304)||(43315538-43315608)
[»] chr1 (12 HSPs)
chr1 (238-304)||(3949639-3949705)
chr1 (228-302)||(32348407-32348481)
chr1 (238-304)||(35058684-35058750)
chr1 (227-294)||(32602949-32603016)
chr1 (238-304)||(1714040-1714106)
chr1 (226-304)||(3160988-3161066)
chr1 (234-300)||(15601976-15602041)
chr1 (228-302)||(21516500-21516574)
chr1 (234-279)||(4373251-4373296)
chr1 (263-304)||(23908849-23908890)
chr1 (228-292)||(5923865-5923929)
chr1 (240-304)||(40856611-40856675)
[»] scaffold0027 (1 HSPs)
scaffold0027 (228-304)||(8076-8151)
[»] chr4 (19 HSPs)
chr4 (228-304)||(34812666-34812742)
chr4 (234-304)||(6323848-6323918)
chr4 (218-304)||(34440080-34440166)
chr4 (238-304)||(39276512-39276578)
chr4 (240-302)||(53431404-53431466)
chr4 (240-304)||(2103201-2103265)
chr4 (240-304)||(24418112-24418175)
chr4 (228-300)||(28856418-28856490)
chr4 (227-303)||(41173915-41173991)
chr4 (250-301)||(17425591-17425642)
chr4 (239-304)||(4149052-4149117)
chr4 (251-304)||(22431463-22431516)
chr4 (240-301)||(42617745-42617805)
chr4 (227-300)||(46881008-46881081)
chr4 (229-285)||(27611812-27611868)
chr4 (240-304)||(37713452-37713516)
chr4 (228-304)||(39033635-39033711)
chr4 (228-304)||(47138991-47139066)
chr4 (227-298)||(50570216-50570285)
[»] chr2 (11 HSPs)
chr2 (228-304)||(13463523-13463599)
chr2 (218-304)||(12238211-12238297)
chr2 (234-304)||(18491966-18492036)
chr2 (240-301)||(30804380-30804441)
chr2 (245-304)||(27679230-27679289)
chr2 (237-304)||(28249822-28249889)
chr2 (234-303)||(1660221-1660290)
chr2 (227-304)||(21938038-21938115)
chr2 (239-303)||(31063099-31063163)
chr2 (224-280)||(36514643-36514699)
chr2 (244-304)||(42139524-42139584)
[»] chr6 (2 HSPs)
chr6 (241-304)||(34544423-34544486)
chr6 (239-300)||(8014427-8014488)
[»] chr7 (6 HSPs)
chr7 (238-304)||(15050967-15051033)
chr7 (263-304)||(36112689-36112730)
chr7 (221-304)||(19087405-19087488)
chr7 (250-304)||(87164-87218)
chr7 (238-304)||(43911104-43911170)
chr7 (227-300)||(19683439-19683512)


Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 36049307 - 36049611
Alignment:
Q  1 ttttaaaaattaaatcttaaatatcatattagttgtttcaaaacaatagttttgatagttatgtgcggagaacattttagtttatccnnnnnnnnnnnnn 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  36049307 ttttaaaaattaaatcttaaatatcatattagttgtttcaaaacaatagttttgatagttatgtgcggagaacattttagtttatccaaaaataaaaaga 36049406  T
Q  101 nnngcttttatgttcctaattttaagatatcaaaatattttgatagtgttctattactctggttggtaaataatagcaaatatctggtaaactagctt-a 199  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |    
T  36049407 aaagcttttatgttcctaattttaagatatcaaaatattttgatagtgttctattactctgtttgctaaataatagcaaatatctggtaaactagcttta 36049506  T
Q  200 tacgaatgagtttactaccttataactaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgac 299  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  36049507 tacgaatgagtttactaccttatagctaataagttagttgattgaatttatagtgttttgtaaaattagttgtttaactaaattataaatatgaaatgac 36049606  T
Q  300 ataaa 304  Q
    |||||    
T  36049607 ataaa 36049611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 35764794 - 35764724
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||||||  ||||||| ||| ||||||  |||||||||  |||||||||||||||||||||||    
T  35764794 tagttgattgaatttgcagtgtttggtaaaattagcggttgaactagtttataaatatgaaatgacataaa 35764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 28947310 - 28947386
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| ||| |||||||||||  ||||||| ||| |||| || |||||||||  |||||||||||||||||||||||    
T  28947310 ataagctagctgattgaatttgcagtgtttagtaaaatttgtggttgaactagcttataaatatgaaatgacataaa 28947386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 2111080 - 2111014
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||  ||||||| ||| ||||||  |||||||||  |||||||||||||||||||||||    
T  2111080 tgattgaatttgcagtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacataaa 2111014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 43408738 - 43408677
Alignment:
Q  239 gattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    |||||||||| |||||||| ||| |||||||  ||||||||  |||||||||||||||||||    
T  43408738 gattgaatttgtagtgtttggtaaaattagtaattgaactagcttataaatatgaaatgaca 43408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 8407639 - 8407586
Alignment:
Q  251 agtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||| ||| ||||||  |||||||||  |||||||||||||||||||||||    
T  8407639 agtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacataaa 8407586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 14896494 - 14896453
Alignment:
Q  263 aattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  14896494 aattagttgttgaactagcttataaatatgaaatcacataaa 14896453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 29861564 - 29861519
Alignment:
Q  222 taactaataagttagttgattgaatttatagtgttttgtagaatta 267  Q
    ||||||||||| ||||||||||||||| |||||||| ||| |||||    
T  29861564 taactaataagctagttgattgaatttgtagtgtttggtaaaatta 29861519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 4781322 - 4781258
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| | || ||| ||| ||||||| |||||||||   ||||||||||||||||||||||    
T  4781322 attgaattttttgtatttagtaaaattagtggttgaactatcatataaatatgaaatgacataaa 4781258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 37740824 - 37740756
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaa 295  Q
    |||||| ||| ||||||||||| ||||||||  || |||||| ||||||||||  || |||||||||||    
T  37740824 aataagctagctgattgaatttgtagtgtttgatacaattagctgttgaactagcttttaaatatgaaa 37740756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 9198039 - 9198115
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||||||||  || ||||||||||||||||||||    
T  9198039 ataagttagttgattgaatctgtagtgtttggtaaaattagttgttgaactagtttgtaaatatgaaatgacataaa 9198115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 33282303 - 33282379
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||||||||||||||||   ||| ||| |||||| ||||||| ||| ||| |||||||||||||||||||    
T  33282303 ataagttagttgattgaatttatatgatttggtaaaattagctgttgaattaagttacaaatatgaaatgacataaa 33282379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 11042131 - 11042063
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatg 297  Q
    |||||||| |||||||||||| | |||||| ||| ||||||| |||||||||| ||||||||||||||||    
T  11042131 ataagttaattgattgaatttgt-gtgtttggtaaaattagtggttgaactaacttataaatatgaaatg 11042063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 20873056 - 20873132
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| | ||||||||| |||||||| ||| ||| ||  |||||| ||| ||||| |||||||||||||||||    
T  20873056 ataagttagcttattgaatttttagtgtttggtaaaatcagcggttgaagtaacttatacatatgaaatgacataaa 20873132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 37084065 - 37083990
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| ||| ||||||||||| ||||||||  ||| |||||| |||||||||  |||||| ||||||||||||||||    
T  37084065 ataagctagatgattgaattt-tagtgtttgatagcattagtggttgaactagtttataagtatgaaatgacataaa 37083990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 32326001 - 32326081
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaacta----aattataaatatgaaatgacataaa 304  Q
    ||||| |||||||| |||||| |||||||| ||| ||||||| |||||||||    | |||||| ||||||||||||||||    
T  32326001 ataagctagttgatggaatttgtagtgtttggtaaaattagtagttgaactagcttatttataattatgaaatgacataaa 32326081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 32109957 - 32109891
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||| ||||||||| ||| ||||||| | | |||||  ||||| |||||||||||||||||    
T  32109957 tgattgaattcatagtgtttggtaaaattagtggcttaactagcttatatatatgaaatgacataaa 32109891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 54481491 - 54481553
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacata 302  Q
    ||||||||||||||||||  || |||||  |||||| |||| ||||||||||||||| |||||    
T  54481491 attgaatttatagtgtttgataaaattatctgttgagctaacttataaatatgaaataacata 54481553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 38148023 - 38147962
Alignment:
Q  243 gaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||| |||| ||| ||| ||||||   ||||||||||||||||||||||||||| |||||    
T  38148023 gaatttgtagtatttagtaaaattagcgattgaactaaattataaatatgaaatgatataaa 38147962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 22827884 - 22827816
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaat 296  Q
    ||||||||| || |||||||| |||| || | || ||||||  |||||||||| |||||||||||||||    
T  22827884 ataagttagctggttgaatttgtagtcttgtataaaattagcggttgaactaacttataaatatgaaat 22827816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 28956278 - 28956246
Alignment:
Q  272 ttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| |||||||||||||||||||||||    
T  28956278 ttgaactaatttataaatatgaaatgacataaa 28956246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 166824 - 166740
Alignment:
Q  218 cttataactaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacata 302  Q
    |||||| | |||||| ||| ||||||||||| |||||||| ||| ||||||  |||||||||  |||||||||||||||||||||    
T  166824 cttatagcaaataagctagctgattgaatttgtagtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacata 166740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 2942144 - 2942068
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| |||||| |||||||| ||| |||| ||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  2942144 ataagctagttggttgaatttgtagggtttggtaaaattagtggttgaactaacttataaatataaaatgacataaa 2942068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 28363605 - 28363539
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| |||||||| |||  ||||| ||||||||||  |||||| ||||||||||||||||    
T  28363605 tgattgaatttgtagtgtttggtaatattagctgttgaactagtttataagtatgaaatgacataaa 28363539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 31677370 - 31677296
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacat 301  Q
    |||||| ||| |||||||||||| ||||||| ||| || |||  |||||||||  ||| ||||||||||||||||    
T  31677370 aataagctagctgattgaatttacagtgtttggtaaaactagcggttgaactagcttacaaatatgaaatgacat 31677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 43315538 - 43315608
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||||||| |||||||    | ||||||| |||||||||  |||||||||||||||| ||||||    
T  43315538 tagttgattgaatttgtagtgttgatcaaaattagtggttgaactagcttataaatatgaaatgtcataaa 43315608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 3949639 - 3949705
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| |||||||| ||| ||||||   ||||||||| |||||||||||||||||||||||    
T  3949639 tgattgaatttgtagtgtttggtaaaattagcgtttgaactaatttataaatatgaaatgacataaa 3949705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 32348481 - 32348407
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacata 302  Q
    ||||| ||||||||||||||| |||||||| ||| ||||||  ||||| |||  |||||||| ||||||||||||    
T  32348481 ataagctagttgattgaatttgtagtgtttggtaaaattagcggttgagctagcttataaatttgaaatgacata 32348407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 35058750 - 35058684
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| ||||| |||||||| ||| ||||||  |||||||||  |||||||||||||||||||||||    
T  35058750 tgattaaatttgtagtgtttggtaaaattagcggttgaactaccttataaatatgaaatgacataaa 35058684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 32603016 - 32602949
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaa 294  Q
    ||||| |||| ||||||||||| |||||||| ||| ||||||| |||||| ||  |||||||||||||    
T  32603016 aataaattagctgattgaatttgtagtgtttagtaaaattagtggttgaagtagcttataaatatgaa 32602949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 1714040 - 1714106
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| |||||||| ||| |||||   |||||| ||  |||||||||||||||||||||||    
T  1714040 tgattgaatttgtagtgtttggtaaaattaaccgttgaagtagtttataaatatgaaatgacataaa 1714106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 3161066 - 3160988
Alignment:
Q  226 taataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||| ||| ||||||||||| |||||||| ||| |||||    ||||||||   ||||||||||||||||||||||    
T  3161066 taataagctagctgattgaatttgtagtgtttggtaaaattaacgtttgaactagcatataaatatgaaatgacataaa 3160988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 15601976 - 15602041
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    ||||||||||||||||||| ||||  || ||||||| |||||||||  |||| ||||||||||||||    
T  15601976 tagttgattgaatttatagcgtttattaaaattagtggttgaactagtttat-aatatgaaatgaca 15602041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 21516500 - 21516574
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacata 302  Q
    ||||| ||| ||||||||||| | |||||| ||| ||||||| |||||| ||  || ||||||||||||||||||    
T  21516500 ataagctagctgattgaatttgttgtgtttggtaaaattagtggttgaaatagcttttaaatatgaaatgacata 21516574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 4373296 - 4373251
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaacta 279  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||    
T  4373296 tagttggttgaatttatagtgttcggtaaaattagttgttgaacta 4373251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 23908849 - 23908890
Alignment:
Q  263 aattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||| |||||||||  |||||||||||||||||||||||    
T  23908849 aattagtggttgaactagcttataaatatgaaatgacataaa 23908890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 5923929 - 5923865
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatg 292  Q
    ||||| ||| ||||||||||| |||||||| ||| ||||| | |||||||||  |||||||||||    
T  5923929 ataagctagctgattgaatttttagtgtttggtaaaattaatggttgaactagcttataaatatg 5923865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 40856611 - 40856675
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||  |||||  || ||||||  |||||||||| ||||||||||||||||| |||||    
T  40856611 attgaatttatgatgtttgataaaattagcggttgaactaacttataaatatgaaatgatataaa 40856675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 8151 - 8076
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||| |||||||||||| ||||||||  || |||||||||||| ||||  ||| |||||||||||||||||||    
T  8151 ataagttaattgattgaatttgtagtgtttgataaaattagttgttgcactacctta-aaatatgaaatgacataaa 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 34812666 - 34812742
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| ||| |||||||||||  ||||||| ||| |||| || |||||||||  |||||||||||||||||||||||    
T  34812666 ataagctagctgattgaatttgcagtgtttagtaaaatttgtggttgaactagcttataaatatgaaatgacataaa 34812742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 6323848 - 6323918
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||||||  |||||||||||| ||||||| | ||||||   | |||||||||||||||||||||    
T  6323848 tagttgattgaattcgtagtgttttgtaaaattagtggctgaacttgctgataaatatgaaatgacataaa 6323918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 34440166 - 34440080
Alignment:
Q  218 cttataactaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| | ||||||| ||||| || ||| ||||||| ||| |||||||| || || ||| | |||||||||||||||||||||    
T  34440166 cttataactgaaaagttagctgattaaaattaaagtgtttggtaaaattagttttttaagtaattaataaatatgaaatgacataaa 34440080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 39276578 - 39276512
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| |||||||| ||| ||||||| |||||||||  |||||||| | ||||||||||||    
T  39276578 tgattgaatttgtagtgtttggtaaaattagtggttgaactagcttataaatcttaaatgacataaa 39276512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 53431404 - 53431466
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacata 302  Q
    |||||||||  | ||||| ||| ||||||| |||||||||| |||||||||||||||||||||    
T  53431404 attgaatttgcaatgtttcgtaaaattagtcgttgaactaatttataaatatgaaatgacata 53431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 2103201 - 2103265
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| |||||||| ||| ||||| | ||||||| || |||||||||| ||||||||||||    
T  2103201 attgaatttgtagtgtttggtaaaattaatggttgaacaaacttataaatataaaatgacataaa 2103265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 24418112 - 24418175
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| |||||||| ||| ||||||||||| || ||  |||||||||||||||||||||||    
T  24418112 attgaatttgtagtgtttggta-aattagttgttcaagtagcttataaatatgaaatgacataaa 24418175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 28856490 - 28856418
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    ||||| |||||||||||||||  |||||||   |||||||||||| ||||||  ||||||||||| |||||||    
T  28856490 ataagatagttgattgaatttgcagtgtttaacagaattagttgtggaactagcttataaatatgtaatgaca 28856418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 41173991 - 41173915
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataa 303  Q
    |||||||||||||||||||||| || ||||| ||| |||||    ||||||||  || |||||||||||||||||||    
T  41173991 aataagttagttgattgaatttgtattgtttggtaaaattatcgattgaactagcttgtaaatatgaaatgacataa 41173915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 17425591 - 17425642
Alignment:
Q  250 tagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacat 301  Q
    |||||||| ||| ||||||| |||||| ||| ||||||||||||||||||||    
T  17425591 tagtgtttggtaaaattagtggttgaagtaacttataaatatgaaatgacat 17425642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 4149117 - 4149052
Alignment:
Q  239 gattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||  ||||||| ||| ||||| | ||||| |||| |||||||||||| ||||||||||    
T  4149117 gattgaatttgcagtgtttggtaaaattactggttgagctaatttataaatatgagatgacataaa 4149052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 22431516 - 22431463
Alignment:
Q  251 agtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||| ||| ||||||| ||| |||||| |||||||||| ||||||||||||    
T  22431516 agtgtttggtaaaattagtggttcaactaacttataaatataaaatgacataaa 22431463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 42617805 - 42617745
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacat 301  Q
    ||||||||| |||||||| ||| |||||   |||||||||| ||||||||||||||||||||    
T  42617805 attgaatttgtagtgtttagta-aattaacggttgaactaatttataaatatgaaatgacat 42617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 46881081 - 46881008
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    |||||| ||||||||| ||||||||||||||  || |||||   | |||||||| |||||||||| ||||||||    
T  46881081 aataagctagttgattaaatttatagtgtttaataaaattaacggctgaactaacttataaatataaaatgaca 46881008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 27611812 - 27611868
Alignment:
Q  229 taagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattat 285  Q
    |||| ||||||||||||||| |||||||| ||| ||||||  |||||||||| ||||    
T  27611812 taagctagttgattgaatttgtagtgtttggtaaaattagcagttgaactaacttat 27611868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 37713516 - 37713452
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| || ||||  ||| |||||||||  ||||||  |||||||||||||||||||||||    
T  37713516 attgaatttgtaatgttgggtaaaattagttgcggaactagcttataaatatgaaatgacataaa 37713452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 39033711 - 39033635
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||| |||| ||||||||||| ||||||||  || |||||   ||| |||||| ||| |||||||||||||||||||    
T  39033711 ataaattagctgattgaatttgtagtgtttgataaaattatcggttaaactaacttaaaaatatgaaatgacataaa 39033635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 47138991 - 47139066
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||| ||||||||||||||  ||||||| || |||||||||||||||||   || ||||||| |||| |||||||    
T  47138991 ataagtcagttgattgaatttgaagtgtttggt-gaattagttgttgaactggtttttaaatataaaataacataaa 47139066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 50570216 - 50570285
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatga 298  Q
    ||||| || |||||| ||||||||||||||| ||| |||| |  |||||| ||| |||||||||||||||||    
T  50570216 aataaatttgttgatcgaatttatagtgtttggtaaaattcg--gttgaattaatttataaatatgaaatga 50570285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 13463599 - 13463523
Alignment:
Q  228 ataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| |||||||||||||||||| | ||| ||| ||||| | |||| |||| ||||||||||||||||| ||||||    
T  13463599 ataagctagttgattgaatttatattatttagtaaaattaatagttggactatattataaatatgaaatggcataaa 13463523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 12238211 - 12238297
Alignment:
Q  218 cttataactaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||  ||||| || |||||||||||| |||||||||||| ||||||  ||| || ||| ||||| ||||||||| |||||||    
T  12238211 cttataacagataagctaattgattgaatttgtagtgttttgtaaaattagcagttaaattaacttatatatatgaaataacataaa 12238297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 18492036 - 18491966
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||| |||||||| |||||  || ||||||  |||||||||| |||| ||||||||||||||||||    
T  18492036 tagttgattaaatttataatgtttgataaaattagcagttgaactaacttattaatatgaaatgacataaa 18491966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 30804380 - 30804441
Alignment:
Q  240 attgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacat 301  Q
    ||||||||| |||||||| ||| ||||||  ||||||||| ||||||| |||||||||||||    
T  30804380 attgaatttgtagtgtttcgtaaaattagcggttgaactagattataagtatgaaatgacat 30804441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 27679289 - 27679230
Alignment:
Q  245 atttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| | ||| ||||||  |||||||||  |||||||||||||||||||||||    
T  27679289 atttatagtgtctggtaaaattagcggttgaactagcttataaatatgaaatgacataaa 27679230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 28249822 - 28249889
Alignment:
Q  237 ttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||| ||||| |||||| | ||| ||||| | ||||| |||| |||||||||||||||||||||||    
T  28249822 ttgattaaatttgtagtgtgtagtaaaattaatggttgatctaacttataaatatgaaatgacataaa 28249889  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 1660221 - 1660290
Alignment:
Q  234 tagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataa 303  Q
    ||||||||||||||| |||||||| || ||||||   ||||||||   ||||||||||||||| ||||||    
T  1660221 tagttgattgaatttgtagtgtttggtggaattaagggttgaacttgtttataaatatgaaataacataa 1660290  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 21938115 - 21938038
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| ||||||||||||||||  ||||||| ||| |||||   |||||| ||  |||||||||| ||||||||||||    
T  21938115 aataaattagttgattgaatttgcagtgtttagtaaaattaacggttgaaatatcttataaatataaaatgacataaa 21938038  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 31063163 - 31063099
Alignment:
Q  239 gattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataa 303  Q
    |||||||||| ||||||||  ||  |||||  |||||| ||| ||||||||||||||||||||||    
T  31063163 gattgaatttgtagtgtttgataagattagcggttgaagtaatttataaatatgaaatgacataa 31063099  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 36514699 - 36514643
Alignment:
Q  224 actaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaa 280  Q
    ||||||||| ||||||||||||||| ||||||||  || ||||| | ||||||||||    
T  36514699 actaataagatagttgattgaatttgtagtgtttcataaaattaatggttgaactaa 36514643  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 42139584 - 42139524
Alignment:
Q  244 aatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| |||||||| ||| ||||||  |||||||||  ||||||||||||||||| |||||    
T  42139584 aatttgtagtgtttggtaaaattagcagttgaactagcttataaatatgaaatgatataaa 42139524  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 34544486 - 34544423
Alignment:
Q  241 ttgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||| ||||||||  || ||||||| |||||||||  |||||||||||||||||||||||    
T  34544486 ttgaatttgtagtgtttgatacaattagtggttgaactagcttataaatatgaaatgacataaa 34544423  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 8014427 - 8014488
Alignment:
Q  239 gattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    ||||||||||||||||||| ||| ||||||  || ||||||  ||||||| |||||||||||    
T  8014427 gattgaatttatagtgtttggtaaaattagcagtcgaactagcttataaacatgaaatgaca 8014488  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 15051033 - 15050967
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||  |||| | ||||||||||||||||    
T  15051033 tgattgaatttagagtgtttggtaaaattagtggttgaactagcttatgagtatgaaatgacataaa 15050967  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 36112689 - 36112730
Alignment:
Q  263 aattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  36112689 aattagttgttgaactagcttataaatatgaaatgacataaa 36112730  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 19087488 - 19087405
Alignment:
Q  221 ataactaataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||| |||||||||  |||||||||||||||| |||  || |||||   |||||| ||| ||| |||||||||||||||||||    
T  19087488 ataacgaataagttaaatgattgaatttatagtatttgataaaattaacggttgaattaatttaaaaatatgaaatgacataaa 19087405  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 87164 - 87218
Alignment:
Q  250 tagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    |||||||||||| ||||||  |||||| || ||| ||||||||||||||||||||    
T  87164 tagtgttttgtaaaattagcggttgaattagattgtaaatatgaaatgacataaa 87218  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 43911104 - 43911170
Alignment:
Q  238 tgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgacataaa 304  Q
    ||||||||||| |||| ||| ||| ||| ||| |||||||||| ||||||| ||||||||| |||||    
T  43911104 tgattgaatttgtagtatttggtaaaatcagtggttgaactaacttataaacatgaaatgatataaa 43911170  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 19683439 - 19683512
Alignment:
Q  227 aataagttagttgattgaatttatagtgttttgtagaattagttgttgaactaaattataaatatgaaatgaca 300  Q
    ||||||||| |||||||||||| ||||||||  || || |||  |||||| ||| | |||||||||||||||||    
T  19683439 aataagttaattgattgaatttgtagtgtttgataaaaatagcggttgaagtaactaataaatatgaaatgaca 19683512  T

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