View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18638_low_15 (Length: 351)

Name: NF18638_low_15
Description: NF18638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18638_low_15
NF18638_low_15
[»] chr8 (38 HSPs)
chr8 (1-86)||(9122512-9122597)
chr8 (152-232)||(9122362-9122444)
chr8 (225-335)||(43851663-43851772)
chr8 (227-335)||(5554869-5554977)
chr8 (227-335)||(7689793-7689901)
chr8 (227-335)||(10108370-10108478)
chr8 (227-335)||(10171413-10171521)
chr8 (227-335)||(30789777-30789885)
chr8 (217-335)||(5555139-5555257)
chr8 (227-335)||(10108640-10108748)
chr8 (226-335)||(14820294-14820402)
chr8 (227-335)||(14820564-14820672)
chr8 (9-74)||(16947388-16947453)
chr8 (5-74)||(18340428-18340497)
chr8 (227-335)||(21147936-21148045)
chr8 (5-82)||(3608470-3608547)
chr8 (226-274)||(18044158-18044206)
chr8 (235-335)||(42112993-42113092)
chr8 (238-335)||(30789519-30789615)
chr8 (227-335)||(42606023-42606131)
chr8 (227-266)||(7689524-7689563)
chr8 (226-335)||(2583319-2583428)
chr8 (227-335)||(26136685-26136793)
chr8 (227-335)||(17622890-17622995)
chr8 (227-283)||(21148258-21148314)
chr8 (227-283)||(43481637-43481693)
chr8 (227-274)||(35367410-35367457)
chr8 (293-335)||(2583590-2583632)
chr8 (217-269)||(1950029-1950081)
chr8 (225-260)||(14767849-14767884)
chr8 (227-274)||(20877076-20877123)
chr8 (296-335)||(26136955-26136994)
chr8 (227-266)||(26137023-26137062)
chr8 (227-266)||(42113320-42113359)
chr8 (231-274)||(42605759-42605802)
chr8 (293-335)||(14767573-14767615)
chr8 (230-267)||(17623224-17623261)
chr8 (227-267)||(2583659-2583699)
[»] chr7 (42 HSPs)
chr7 (227-335)||(28218433-28218541)
chr7 (222-335)||(41600228-41600341)
chr7 (227-335)||(12006810-12006918)
chr7 (227-335)||(28218178-28218287)
chr7 (227-335)||(12006541-12006648)
chr7 (227-335)||(10409644-10409751)
chr7 (227-335)||(23704662-23704769)
chr7 (226-335)||(20419535-20419644)
chr7 (227-335)||(48672549-48672657)
chr7 (227-335)||(23704931-23705038)
chr7 (221-335)||(38879717-38879832)
chr7 (227-335)||(23383770-23383878)
chr7 (227-336)||(25772364-25772472)
chr7 (226-274)||(24195203-24195251)
chr7 (226-335)||(20419806-20419916)
chr7 (226-335)||(16995199-16995307)
chr7 (218-335)||(25772601-25772717)
chr7 (231-335)||(1250476-1250580)
chr7 (227-335)||(20458961-20459068)
chr7 (227-335)||(20963764-20963871)
chr7 (225-274)||(38880052-38880101)
chr7 (222-334)||(23383494-23383607)
chr7 (226-335)||(41599957-41600066)
chr7 (227-335)||(20458692-20458799)
chr7 (227-283)||(48672277-48672333)
chr7 (228-283)||(7658287-7658342)
chr7 (227-266)||(33162875-33162914)
chr7 (13-76)||(43392990-43393053)
chr7 (229-332)||(48648502-48648603)
chr7 (225-283)||(6465853-6465911)
chr7 (293-335)||(20963561-20963603)
chr7 (228-335)||(44816832-44816943)
chr7 (228-274)||(48648263-48648309)
chr7 (294-335)||(38879994-38880035)
chr7 (230-266)||(7657972-7658008)
chr7 (227-279)||(31852156-31852208)
chr7 (13-76)||(7415018-7415081)
chr7 (232-283)||(23258246-23258297)
chr7 (228-274)||(31851242-31851288)
chr7 (294-335)||(1250273-1250314)
chr7 (298-335)||(7658239-7658276)
chr7 (227-267)||(20963494-20963534)
[»] chr4 (57 HSPs)
chr4 (217-335)||(9396689-9396807)
chr4 (227-335)||(46046694-46046801)
chr4 (229-335)||(9618982-9619088)
chr4 (226-335)||(9516880-9516989)
chr4 (5-82)||(153309-153386)
chr4 (227-335)||(9396969-9397076)
chr4 (221-335)||(9619249-9619363)
chr4 (225-335)||(26252507-26252617)
chr4 (228-335)||(35376164-35376270)
chr4 (230-335)||(38574238-38574343)
chr4 (5-82)||(468656-468733)
chr4 (224-335)||(3018008-3018120)
chr4 (227-335)||(31090331-31090439)
chr4 (228-335)||(9516611-9516718)
chr4 (227-283)||(31218303-31218359)
chr4 (228-335)||(34063983-34064090)
chr4 (227-335)||(38573969-38574076)
chr4 (227-283)||(46046430-46046486)
chr4 (227-274)||(3273621-3273668)
chr4 (230-335)||(7819018-7819122)
chr4 (227-335)||(13132211-13132317)
chr4 (232-335)||(37012712-37012815)
chr4 (226-335)||(31090059-31090169)
chr4 (227-274)||(41946965-41947012)
chr4 (227-274)||(48259823-48259870)
chr4 (227-278)||(50462723-50462774)
chr4 (226-335)||(31083367-31083476)
chr4 (227-335)||(31943950-31944058)
chr4 (229-335)||(48260021-48260126)
chr4 (232-274)||(48580197-48580239)
chr4 (226-335)||(3273890-3273997)
chr4 (227-335)||(12904747-12904854)
chr4 (226-335)||(15640715-15640823)
chr4 (227-268)||(18667627-18667668)
chr4 (6-82)||(21241456-21241535)
chr4 (227-335)||(37012977-37013084)
chr4 (226-266)||(41947193-41947233)
chr4 (228-274)||(15641047-15641093)
chr4 (227-335)||(20069570-20069676)
chr4 (227-335)||(31082185-31082292)
chr4 (230-335)||(35376398-35376502)
chr4 (46-86)||(10122262-10122302)
chr4 (227-283)||(31944272-31944328)
chr4 (227-275)||(46935169-46935217)
chr4 (295-334)||(12520707-12520746)
chr4 (296-335)||(26252337-26252376)
chr4 (227-266)||(36887680-36887719)
chr4 (232-266)||(4356219-4356253)
chr4 (293-335)||(15640985-15641027)
chr4 (293-335)||(34064252-34064294)
chr4 (8-73)||(16702806-16702871)
chr4 (5-74)||(42098394-42098463)
chr4 (219-264)||(48579858-48579903)
chr4 (227-283)||(3018332-3018388)
chr4 (227-279)||(7819346-7819398)
chr4 (10-74)||(11870895-11870958)
chr4 (230-266)||(13131943-13131979)
[»] chr5 (35 HSPs)
chr5 (226-335)||(23979171-23979280)
chr5 (223-335)||(31799636-31799748)
chr5 (232-335)||(7125923-7126025)
chr5 (226-335)||(18336726-18336834)
chr5 (227-335)||(17762552-17762660)
chr5 (227-335)||(14143902-14144009)
chr5 (228-335)||(41001623-41001729)
chr5 (218-335)||(14411688-14411805)
chr5 (227-335)||(7126187-7126295)
chr5 (227-335)||(14144171-14144279)
chr5 (227-335)||(24837169-24837277)
chr5 (227-335)||(24837439-24837547)
chr5 (6-82)||(18600309-18600385)
chr5 (226-335)||(18336466-18336576)
chr5 (227-335)||(24650969-24651077)
chr5 (227-335)||(17762283-17762390)
chr5 (227-335)||(24074303-24074411)
chr5 (227-335)||(29445076-29445183)
chr5 (231-335)||(31799910-31800013)
chr5 (5-82)||(32274374-32274451)
chr5 (227-335)||(6817123-6817230)
chr5 (224-335)||(29444803-29444914)
chr5 (228-283)||(993751-993806)
chr5 (226-335)||(994016-994124)
chr5 (227-335)||(4918989-4919098)
chr5 (228-274)||(4919320-4919366)
chr5 (12-82)||(23154744-23154814)
chr5 (229-266)||(24650704-24650741)
chr5 (227-335)||(27158991-27159098)
chr5 (232-335)||(27159227-27159327)
chr5 (227-335)||(30512288-30512395)
chr5 (227-335)||(30552628-30552735)
chr5 (295-335)||(32233967-32234007)
chr5 (227-278)||(41425779-41425830)
chr5 (294-335)||(6817391-6817432)
[»] chr3 (55 HSPs)
chr3 (227-335)||(9266975-9267083)
chr3 (227-335)||(14171856-14171964)
chr3 (227-335)||(16721991-16722099)
chr3 (227-335)||(33372674-33372782)
chr3 (227-335)||(45969915-45970023)
chr3 (227-334)||(14262307-14262414)
chr3 (227-335)||(49986527-49986636)
chr3 (227-335)||(16722261-16722369)
chr3 (227-335)||(35995678-35995786)
chr3 (220-335)||(14162141-14162255)
chr3 (217-335)||(43572379-43572497)
chr3 (226-327)||(19720332-19720433)
chr3 (227-335)||(14262036-14262144)
chr3 (227-335)||(19113035-19113143)
chr3 (227-335)||(20853966-20854073)
chr3 (227-335)||(33372406-33372514)
chr3 (224-335)||(5800602-5800713)
chr3 (227-283)||(9267296-9267352)
chr3 (227-335)||(14171587-14171694)
chr3 (227-283)||(35995997-35996053)
chr3 (226-335)||(5800875-5800983)
chr3 (222-335)||(11003727-11003840)
chr3 (227-335)||(19112764-19112873)
chr3 (227-335)||(20853695-20853804)
chr3 (227-335)||(45970185-45970294)
chr3 (223-268)||(14161867-14161912)
chr3 (217-266)||(21632891-21632940)
chr3 (227-335)||(21633166-21633274)
chr3 (227-268)||(30500377-30500418)
chr3 (226-334)||(45003495-45003603)
chr3 (227-283)||(27946187-27946243)
chr3 (10-76)||(55071319-55071384)
chr3 (227-335)||(30500043-30500149)
chr3 (294-335)||(38283820-38283861)
chr3 (227-283)||(3424774-3424830)
chr3 (218-266)||(17465706-17465754)
chr3 (228-335)||(52552958-52553065)
chr3 (232-283)||(27946114-27946165)
chr3 (227-266)||(49986867-49986906)
chr3 (232-335)||(52552695-52552800)
chr3 (223-335)||(4204705-4204816)
chr3 (230-274)||(17649340-17649384)
chr3 (239-334)||(36990931-36991025)
chr3 (239-334)||(37016371-37016465)
chr3 (227-335)||(45003766-45003873)
chr3 (227-274)||(3425979-3426026)
chr3 (225-260)||(15328461-15328496)
chr3 (227-274)||(17465367-17465414)
chr3 (295-334)||(35740883-35740922)
chr3 (232-278)||(1067719-1067765)
chr3 (293-335)||(15328730-15328772)
chr3 (230-335)||(38283553-38283658)
chr3 (227-268)||(35741921-35741962)
chr3 (294-335)||(43572661-43572702)
chr3 (226-274)||(35740816-35740864)
[»] chr2 (44 HSPs)
chr2 (227-335)||(17850856-17850964)
chr2 (226-335)||(17850586-17850694)
chr2 (226-335)||(15106337-15106444)
chr2 (226-335)||(23806222-23806331)
chr2 (226-335)||(23854687-23854796)
chr2 (238-335)||(26135828-26135925)
chr2 (227-335)||(17463361-17463469)
chr2 (227-335)||(15106067-15106175)
chr2 (227-335)||(19251471-19251578)
chr2 (226-274)||(23855025-23855073)
chr2 (227-333)||(23046707-23046813)
chr2 (228-274)||(26560886-26560932)
chr2 (227-335)||(26236127-26236235)
chr2 (227-335)||(26236365-26236472)
chr2 (6-82)||(15731625-15731700)
chr2 (227-283)||(22263515-22263571)
chr2 (227-335)||(26560556-26560662)
chr2 (226-333)||(44098894-44099001)
chr2 (217-335)||(20499015-20499133)
chr2 (13-79)||(26294597-26294664)
chr2 (226-335)||(30390458-30390567)
chr2 (230-283)||(13254758-13254811)
chr2 (226-283)||(42670716-42670773)
chr2 (227-283)||(19251791-19251847)
chr2 (227-275)||(23047912-23047960)
chr2 (226-335)||(42670989-42671098)
chr2 (227-335)||(13254497-13254605)
chr2 (226-283)||(17463091-17463148)
chr2 (223-335)||(30958680-30958791)
chr2 (227-283)||(20498747-20498803)
chr2 (226-266)||(26136156-26136196)
chr2 (226-266)||(34548573-34548613)
chr2 (227-274)||(12419053-12419100)
chr2 (227-274)||(12431113-12431160)
chr2 (295-334)||(21482151-21482190)
chr2 (227-274)||(30960002-30960049)
chr2 (293-335)||(22263257-22263299)
chr2 (297-335)||(23806022-23806060)
chr2 (13-74)||(26178765-26178824)
chr2 (217-267)||(33290385-33290435)
chr2 (24-74)||(34546684-34546734)
chr2 (226-268)||(39878410-39878451)
chr2 (294-335)||(23854936-23854977)
chr2 (227-335)||(39878103-39878210)
[»] chr1 (39 HSPs)
chr1 (226-335)||(39826316-39826425)
chr1 (227-335)||(39826050-39826158)
chr1 (227-335)||(18462286-18462393)
chr1 (227-335)||(24467629-24467736)
chr1 (218-335)||(17606578-17606693)
chr1 (227-335)||(30299232-30299339)
chr1 (227-335)||(39711342-39711450)
chr1 (226-335)||(30299501-30299610)
chr1 (226-335)||(34749375-34749484)
chr1 (227-335)||(4906962-4907070)
chr1 (227-335)||(4907232-4907340)
chr1 (230-283)||(17606307-17606360)
chr1 (227-335)||(33628690-33628798)
chr1 (227-335)||(52058278-52058386)
chr1 (224-335)||(52058008-52058119)
chr1 (227-334)||(29696565-29696671)
chr1 (226-335)||(39970915-39971025)
chr1 (226-335)||(8292803-8292912)
chr1 (227-335)||(33628960-33629068)
chr1 (226-335)||(24467897-24468003)
chr1 (227-278)||(27039638-27039689)
chr1 (219-335)||(8293077-8293194)
chr1 (225-283)||(18342339-18342397)
chr1 (221-335)||(34749132-34749245)
chr1 (231-335)||(18462554-18462658)
chr1 (227-335)||(29696828-29696935)
chr1 (226-335)||(39711073-39711180)
chr1 (227-283)||(20995698-20995754)
chr1 (229-335)||(43539349-43539455)
chr1 (227-335)||(48072231-48072339)
chr1 (226-266)||(13230071-13230111)
chr1 (222-266)||(20996006-20996050)
chr1 (227-283)||(43400753-43400809)
chr1 (227-266)||(39970645-39970684)
chr1 (227-274)||(43539678-43539725)
chr1 (232-274)||(42510346-42510388)
chr1 (227-327)||(26271163-26271263)
chr1 (227-283)||(17500769-17500825)
chr1 (294-334)||(42510081-42510121)
[»] scaffold0117 (1 HSPs)
scaffold0117 (232-335)||(12252-12355)
[»] chr6 (20 HSPs)
chr6 (225-335)||(9481180-9481290)
chr6 (225-335)||(26385276-26385386)
chr6 (227-335)||(32017774-32017881)
chr6 (230-335)||(26385544-26385649)
chr6 (232-335)||(9154884-9154988)
chr6 (227-335)||(24732208-24732315)
chr6 (227-335)||(18500315-18500422)
chr6 (227-283)||(24731935-24731991)
chr6 (11-82)||(33630705-33630776)
chr6 (228-335)||(19284130-19284237)
chr6 (227-266)||(18500668-18500707)
chr6 (227-274)||(30617967-30618014)
chr6 (294-334)||(30618232-30618272)
chr6 (227-274)||(2299644-2299691)
chr6 (231-274)||(10321737-10321780)
chr6 (223-274)||(33714479-33714530)
chr6 (293-335)||(9481452-9481494)
chr6 (293-335)||(33637625-33637667)
chr6 (297-334)||(2299580-2299617)
chr6 (230-266)||(30458903-30458939)
[»] scaffold0361 (2 HSPs)
scaffold0361 (217-335)||(4552-4671)
scaffold0361 (227-335)||(4833-4940)
[»] scaffold0449 (2 HSPs)
scaffold0449 (227-335)||(7469-7578)
scaffold0449 (228-333)||(7227-7332)
[»] scaffold0185 (1 HSPs)
scaffold0185 (227-331)||(3869-3973)
[»] scaffold0141 (2 HSPs)
scaffold0141 (227-335)||(8592-8700)
scaffold0141 (227-266)||(8325-8364)
[»] scaffold0809 (2 HSPs)
scaffold0809 (227-335)||(1411-1518)
scaffold0809 (227-274)||(1737-1784)
[»] scaffold0352 (2 HSPs)
scaffold0352 (227-283)||(6001-6057)
scaffold0352 (227-268)||(4667-4708)
[»] scaffold0477 (2 HSPs)
scaffold0477 (216-335)||(5018-5135)
scaffold0477 (227-266)||(4880-4919)
[»] scaffold0176 (1 HSPs)
scaffold0176 (227-283)||(15950-16006)
[»] scaffold0157 (1 HSPs)
scaffold0157 (295-334)||(171-210)
[»] scaffold0881 (1 HSPs)
scaffold0881 (293-335)||(286-328)
[»] scaffold0586 (1 HSPs)
scaffold0586 (225-275)||(5864-5914)


Alignment Details
Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9122597 - 9122512
Alignment:
Q  1 ttatctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtcatatc 86  Q
    ||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9122597 ttatctagtcacaaatccagataaaaaatatatgaacacacatatataaatggagagaattaaaagaaaaataatttaatcatatc 9122512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 9122444 - 9122362
Alignment:
Q  152 ttgtatttgtgaccaacttaaactttctctacaaacagatagataaacacattatttggaga--cacataaaattatgggtaa 232  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||    
T  9122444 ttgtgtttgtgaccaacttaaactttctctacaaagagatagataaacacattatttggagacacacataaaattatgagtaa 9122362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 43851663 - 43851772
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||    
T  43851663 atgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaacaaaagatttagattttgtccctgtaatttcagattc 43851761  T
Q  325 ttccacttttg 335  Q
    |||||||||||    
T  43851762 ttccacttttg 43851772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 5554869 - 5554977
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||| |||||||||||||||||||| | ||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  5554969 ccacttttg 5554977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 7689901 - 7689793
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  |||         |||||| ||||||||||| |||||| ||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  7689801 ccacttttg 7689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 10108370 - 10108478
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  10108470 ccacttttg 10108478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 10171521 - 10171413
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||          ||||||||||||||||| |||||||||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  10171421 tcacttttg 10171413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 30789885 - 30789777
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  30789785 ccacttttg 30789777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 5555257 - 5555139
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataatt 316  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||    
T  5555257 ataaaattaagggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatt 5555158  T
Q  317 ttagattcttccacttttg 335  Q
    | | |||||||||||||||    
T  5555157 tcatattcttccacttttg 5555139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 10108748 - 10108640
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||||||||||||||||||||||||||||| ||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  10108648 ccacttttg 10108640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 14820294 - 14820402
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||         |||||||||||||||||| |||||| | |||||    
T  14820294 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 14820392  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  14820393 tccacttttg 14820402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 14820672 - 14820564
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14820572 ccacttttg 14820564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 16947453 - 16947388
Alignment:
Q  9 tcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  16947453 tcacaaccccaaataaaaaatatttggacacacatacataaatggagagaattaaaagaaagataa 16947388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 18340428 - 18340497
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    ||||||||||||| |||| |||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  18340428 ctagtcacaaacctaaattaaaaatatttgaacacacatacataaatggagagaattaaaagaaaaataa 18340497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 21147936 - 21148045
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||| ||| ||||          |||||||||||||||||| |||||| |||||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  21148036 tccacttttg 21148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 3608470 - 3608547
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    |||| |||||||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||||| |||||||    
T  3608470 ctagacacaaacccagataaaaaatatttggacacacatacataaaatgagataattaaaagaaaaataaattagtca 3608547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 18044206 - 18044158
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18044206 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 18044158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 42112993 - 42113092
Alignment:
Q  235 acctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccactttt 334  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||         |||||||||| ||||||| |||||| |||||||| |||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattatgtccctgtaatttaagattctttcactttt 42113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 30789519 - 30789615
Alignment:
Q  238 tcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||         ||||||||||||||| || |||||| |||||| ||||||||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttg 30789615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 42606131 - 42606023
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| ||||||| ||||||||||||||||||||||| | |||| |||| |||         |||||||||||||||||  |||||| | ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattctt 42606032  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  42606031 ccacttttg 42606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 7689524 - 7689563
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatt 7689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 2583319 - 2583428
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||| ||   |||         |||||||||||||||||| ||||||  ||||||    
T  2583319 tgggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattct 2583418  T
Q  326 tccacttttg 335  Q
    || |||||||    
T  2583419 tctacttttg 2583428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 26136685 - 26136793
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| ||||||||||||||| |||||||||||||||||||||  |||| ||| ||||          ||||||||||||||| | |||||| ||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattctt 26136784  T
Q  327 ccacttttg 335  Q
    ||| |||||    
T  26136785 ccaattttg 26136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 17622890 - 17622995
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| ||||||||||||||||| |  |||| ||| ||||         ||||||||||||||  || |||||||||||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt--aaaaaaagatttagattttgt-tctgtaattttagattctt 17622986  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  17622987 ccacttttg 17622995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 21148314 - 21148258
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||| ||| ||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgt 21148258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 43481693 - 43481637
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgt 43481637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 35367410 - 35367457
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaattccggtttt 35367457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 2583632 - 2583590
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  2583632 gatttaaattttgtccctataatttcagattcttccacttttg 2583590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 1950081 - 1950029
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccg 269  Q
    ||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||    
T  1950081 ataaaataatgggttaatgcctcttttggtccctgtaatatgagcgaattccg 1950029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 14767884 - 14767849
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattag 260  Q
    |||||||||||||||||||||| |||||||||||||    
T  14767884 atgggtaaatacctcttttcgttcctgtaatattag 14767849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 20877123 - 20877076
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||||||||||| ||||||||||||| ||||||||||| ||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggtttt 20877076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 26136994 - 26136955
Alignment:
Q  296 ttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttg 26136955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 26137062 - 26137023
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatt 26137023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 42113359 - 42113320
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatt 42113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 42605759 - 42605802
Alignment:
Q  231 aaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgatttt 42605802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 14767573 - 14767615
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||||| |||||| ||||| |||||||||||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttg 14767615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 17623261 - 17623224
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattc 267  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattc 17623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 2583699 - 2583659
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattc 267  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  2583699 gggtaaatatctcttttcgtcctcgtaatattagcgaattc 2583659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 28218541 - 28218433
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  28218441 ccacttttg 28218433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 41600341 - 41600228
Alignment:
Q  222 attatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttaga 321  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| |||    
T  41600341 attaagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcaga 41600242  T
Q  322 ttcttccacttttg 335  Q
    ||||||||||||||    
T  41600241 ttcttccacttttg 41600228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 12006918 - 12006810
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  12006818 ccacttttg 12006810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 28218178 - 28218287
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||          |||||||||||||||||| |||||| |||||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  28218278 tccacttttg 28218287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 12006541 - 12006648
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||          | ||||||||||||||| |||||| ||||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa-aattagattttgtccctgtaatttcagattctt 12006639  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  12006640 ccacttttg 12006648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 10409751 - 10409644
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||         ||||||||||||||| || |||||||||||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattctt 10409653  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  10409652 ccacttttg 10409644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 23704662 - 23704769
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||         |||||| ||||||||||| |||||| ||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgt-aaaaaaaagatttacattttgtccctgtaatttcagattctt 23704760  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  23704761 ccacttttg 23704769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 20419535 - 20419644
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | |||||    
T  20419535 tgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 20419634  T
Q  326 tccacttttg 335  Q
    |||| |||||    
T  20419635 tccatttttg 20419644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 48672657 - 48672549
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||| ||| ||||         |||||||||||| ||||| |||||| ||||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  48672557 ccacttttg 48672549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 23705038 - 23704931
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 23704940  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  23704939 ccacttttg 23704931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 38879717 - 38879832
Alignment:
Q  221 aattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataatttta 319  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||          |||||||||||||||||| |||||| |    
T  38879717 aattttgggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttca 38879816  T
Q  320 gattcttccacttttg 335  Q
     |||||||||||||||    
T  38879817 tattcttccacttttg 38879832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 23383878 - 23383770
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||          |||||||||||||||||| |||||| | ||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  327 ccacttttg 335  Q
    |||| ||||    
T  23383778 ccacctttg 23383770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 25772364 - 25772472
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||         |||||||||||||||| | |||||| | ||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgt-aaaaaaaagatttagattttgtccttgtaatttcatattctt 25772462  T
Q  327 ccacttttgt 336  Q
    ||||||||||    
T  25772463 ccacttttgt 25772472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 24195251 - 24195203
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24195251 tgggtaaatacctcttttcgtccctgtaatattagcgaattctgatttt 24195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 20419916 - 20419806
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| |||| ||| ||||          |||||||||||||||||| |||||| ||||||    
T  20419916 tgggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 20419817  T
Q  325 ttccacttttg 335  Q
    ||| |||||||    
T  20419816 ttctacttttg 20419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 16995199 - 16995307
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||| ||  ||||          ||||||||||||||||| |||||| |||||||    
T  16995199 tgggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattct 16995297  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  16995298 tccacttttg 16995307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 25772717 - 25772601
Alignment:
Q  218 taaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattt 317  Q
    |||||||| ||||||||| |||||||||||||| ||||||||| |||||||  |||| ||| ||||         |||||||||||||||||| ||||||    
T  25772717 taaaatta-gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattt 25772619  T
Q  318 tagattcttccacttttg 335  Q
     ||||||||| |||||||    
T  25772618 cagattcttctacttttg 25772601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 1250580 - 1250476
Alignment:
Q  231 aaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccac 330  Q
    ||||| |||||||||||| |||||||||||||||||||  |||| ||| ||||         |||||||||||||||||| |||||| | ||||||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  331 ttttg 335  Q
    |||||    
T  1250480 ttttg 1250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 20459068 - 20458961
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| ||  ||||         ||||||||||||||| || |||||| ||||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccg-gtttagtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  20458969 ccacttttg 20458961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 20963871 - 20963764
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||          |||||||||| |||||| |||||| ||||||||    
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattctt 20963773  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  20963772 tcacttttg 20963764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 38880101 - 38880052
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38880101 atgggtaaatacctcttttcgtccctgtaatattagcaaattccggtttt 38880052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 334
Target Start/End: Original strand, 23383494 - 23383607
Alignment:
Q  222 attatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttag 320  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||| |||| ||| || |          ||||||||||||||||||||||||| |     
T  23383494 attatgggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcat 23383593  T
Q  321 attcttccactttt 334  Q
    ||||||||| ||||    
T  23383594 attcttccattttt 23383607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 41599957 - 41600066
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||| |||  | |          ||||||||||||||||| |||||| |||||||    
T  41599957 tgggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattct 41600056  T
Q  326 tccacttttg 335  Q
    ||||| ||||    
T  41600057 tccacatttg 41600066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 20458692 - 20458799
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||| | |||||||||||||||||||| ||||||||| |||| ||| ||||          |||||||||||||| || |||||| ||||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattctt 20458790  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  20458791 ccacttttg 20458799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 48672277 - 48672333
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||| ||| ||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgt 48672333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 7658342 - 7658287
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||||||||||||||| |||||| || |||| ||| ||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 33162914 - 33162875
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatt 33162875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 43393053 - 43392990
Alignment:
Q  13 aaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatt 76  Q
    ||||||||||||||||||| ||| |||||||| | ||||| |||||||||||| ||||| ||||    
T  43393053 aaacccaaataaaaaatatttgggcacacatacacaaatgaagagaattaaaaaaaaaaaaatt 43392990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 332
Target Start/End: Complemental strand, 48648603 - 48648502
Alignment:
Q  229 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcc 328  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||| ||| || |         |||||||||||||||  | |||||||||||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctat--aaaaaaagatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  329 actt 332  Q
    ||||    
T  48648505 actt 48648502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 6465853 - 6465911
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||| || ||||||||| |||||||||||||||||||| |||| ||| ||||    
T  6465853 atgggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgt 6465911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 20963561 - 20963603
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  20963561 gatttagatttagtccctgtaattttagattcttccacttttg 20963603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 44816832 - 44816943
Alignment:
Q  228 ggtaaatacctcttttc--gtccctgtaatattagcgaattccgattttggtcactgt--nnnnnnnnngatttagattttgtccctataattttagatt 323  Q
    |||||||||||||||||  |||||||||||||||||||||| || |||| ||| ||||           ||||| |||||||||||| |||||| |||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  324 cttccacttttg 335  Q
    ||||||||||||    
T  44816932 cttccacttttg 44816943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 48648263 - 48648309
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||    
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgatttt 48648309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 38880035 - 38879994
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  38880035 atttagattttgtccctgtaatttcagattcttccacttttg 38879994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 7657972 - 7658008
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatt 7658008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 31852208 - 31852156
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtca 279  Q
    |||| |||||||||||||||||||||||||||| |||||| || |||| ||||    
T  31852208 gggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtca 31852156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 7415081 - 7415018
Alignment:
Q  13 aaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatt 76  Q
    ||||| ||||||| ||||| ||| |||||||  |||||||||||||||||||| ||||| ||||    
T  7415081 aaaccgaaataaataatatttgggcacacattcataaatggagagaattaaaaaaaaaaaaatt 7415018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 23258297 - 23258246
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||||| ||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 31851242 - 31851288
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||||||| | ||||||||| ||||| |||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgatttt 31851288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 1250273 - 1250314
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||| ||||||||| | ||||||||||||||||||||||||    
T  1250273 atttaaattttgtccttttaattttagattcttccacttttg 1250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 7658276 - 7658239
Alignment:
Q  298 agattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttg 7658239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 20963494 - 20963534
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattc 267  Q
    ||||||||| || ||||||||||||||||||||| ||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattc 20963534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 9396689 - 9396807
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataatt 316  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||         ||||||||||||||||||||||||    
T  9396689 ataaaataatggataaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatt 9396788  T
Q  317 ttagattcttccacttttg 335  Q
    | | ||| |||||||||||    
T  9396789 tcaaatttttccacttttg 9396807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 46046801 - 46046694
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  46046702 ccacttttg 46046694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 9618982 - 9619088
Alignment:
Q  229 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcc 328  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  329 acttttg 335  Q
    |||||||    
T  9619082 acttttg 9619088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 9516989 - 9516880
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| |||||||    
T  9516989 tgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 9516890  T
Q  326 tccacttttg 335  Q
    || |||||||    
T  9516889 tctacttttg 9516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 153386 - 153309
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    |||||||||| ||||||| |||||||| ||| |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  153386 ctagtcacaaccccaaatcaaaaatatttgggcacacatagataaatggatagaattaaaagaaaaataaattagtca 153309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 9397076 - 9396969
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattctt 9396978  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  9396977 ccacttttg 9396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 9619363 - 9619249
Alignment:
Q  221 aattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttag 320  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||| ||||         |||||||||||||||| | |||||| |     
T  9619363 aattaagggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcat 9619264  T
Q  321 attcttccacttttg 335  Q
    |||||||||||||||    
T  9619263 attcttccacttttg 9619249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 335
Target Start/End: Complemental strand, 26252617 - 26252507
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||| ||  ||||         |||||||||||||||||| |||||| | ||||    
T  26252617 atgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 26252518  T
Q  325 ttccacttttg 335  Q
    |||||||||||    
T  26252517 ttccacttttg 26252507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 35376164 - 35376270
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||| ||| ||||         ||||||||||||||| || ||||||||||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T
Q  328 cacttttg 335  Q
    ||||||||    
T  35376263 cacttttg 35376270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 38574343 - 38574238
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcca 329  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| ||| ||||         |||||||||||||||||| |||||| | |||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  330 cttttg 335  Q
    ||||||    
T  38574243 cttttg 38574238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 468733 - 468656
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    |||||||||| ||||||| |||||||| ||| || ||||| |||||| |||||||||||||||||||||| |||||||    
T  468733 ctagtcacaatcccaaatcaaaaatatttgggcatacatacataaatagagagaattaaaagaaaaataaattagtca 468656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 3018008 - 3018120
Alignment:
Q  224 tatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagat 322  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| | ||          |||||||||||||||||| |||||| | ||    
T  3018008 tatggataaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatat 3018107  T
Q  323 tcttccacttttg 335  Q
    |||||||||||||    
T  3018108 tcttccacttttg 3018120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 31090439 - 31090331
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||          | ||||||||||||||| |||||| ||||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T
Q  327 ccacttttg 335  Q
    | |||||||    
T  31090339 ctacttttg 31090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 9516611 - 9516718
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |||  |||         |||||||||||||||| | |||||| | |||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  328 cacttttg 335  Q
    ||||||||    
T  9516711 cacttttg 9516718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 31218359 - 31218303
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 34063983 - 34064090
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    |||||||||||||||||||||||||||||||| |||||||   |||| ||| ||||         ||||||||||||||| || |||||| |||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  328 cacttttg 335  Q
    ||||||||    
T  34064083 cacttttg 34064090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 38573969 - 38574076
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||  || ||||         |||||||||||||||||| |||||| | ||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 38574067  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  38574068 ccacttttg 38574076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 46046430 - 46046486
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  46046430 gggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgt 46046486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 3273621 - 3273668
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgatttt 3273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 7819018 - 7819122
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcca 329  Q
    |||||||||||||||| || | |||||||||||||||||| |||| |||| |||         |||||||||||||||||| |||||| |||||||||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  330 cttttg 335  Q
    ||||||    
T  7819117 cttttg 7819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 13132317 - 13132211
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||         |||||||||| ||||||| |||||| | ||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtc-ctgt-aaaaaaaagatttagattctgtccctgtaatttcatattctt 13132220  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  13132219 ccacttttg 13132211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 37012712 - 37012815
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccact 331  Q
    ||||||||||||||||| ||||||||||||||||||  ||||  |||  |||         |||||||||||||||||| |||||| |||||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  332 tttg 335  Q
    ||||    
T  37012812 tttg 37012815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 31090059 - 31090169
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    ||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||| ||||          |||||||||||||||||| |||||| | ||||    
T  31090059 tgggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 31090158  T
Q  325 ttccacttttg 335  Q
    |||||||||||    
T  31090159 ttccacttttg 31090169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 41946965 - 41947012
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattccggtttt 41947012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 48259823 - 48259870
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 48259870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 50462774 - 50462723
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtc 278  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattccaattttggtc 50462723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 31083476 - 31083367
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||  | ||||||||||||||||||| ||||||||||| |||||||  | ||          ||||||||||||||||||| |||| |||||||    
T  31083476 tgggtaaatgtcccttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattct 31083377  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  31083376 tccacttttg 31083367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 31943950 - 31944058
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||  ||||          |||||||||||||||||| |||||| | |||||    
T  31943950 gggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattct 31944048  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  31944049 tccacttttg 31944058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 48260126 - 48260021
Alignment:
Q  229 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcc 328  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||  || ||||         |||||||||||||||||| |||||| | ||||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgt-aaaaaaaagatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  329 acttttg 335  Q
    |||||||    
T  48260027 acttttg 48260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 48580239 - 48580197
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggtttt 48580197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 3273997 - 3273890
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||| ||| || |         |||||||||||| ||||| |||||| |||||||    
T  3273997 tgggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctat-aaaaaaaagatttagattttatccctgtaatttcagattct 3273900  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  3273899 tccacttttg 3273890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 12904747 - 12904854
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||||| |||||||||||||||  | |||| ||| ||||          ||||||||||||||| |||||||| ||||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattctt 12904845  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  12904846 ccacttttg 12904854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 15640715 - 15640823
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||| ||  ||||         |||||||||||||||||| |||||| | |||||    
T  15640715 tgggttaacacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 15640813  T
Q  326 tccacttttg 335  Q
    | ||||||||    
T  15640814 ttcacttttg 15640823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 18667668 - 18667627
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattcc 18667627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 21241535 - 21241456
Alignment:
Q  6 tagtcacaaacccaaataaaaaatatctggacacacatatataa---atggagagaattaaaagaaaaataatttagtca 82  Q
    |||||||||||| |||| |||||||| | |||||| ||||||||   || |||||||||||||||||||||| |||||||    
T  21241535 tagtcacaaacctaaatcaaaaatatttagacacatatatataataaatagagagaattaaaagaaaaataaattagtca 21241456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 37013084 - 37012977
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||| ||||||||||||||||||||||||||| | |||| ||| ||||          | ||||||||||||||| |||||| | ||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaa-aattagattttgtccctgtaatttcatattctt 37012986  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  37012985 ccacttttg 37012977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 41947233 - 41947193
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  41947233 tgggtaaatatctcttttcgtccctgtaatattagcgaatt 41947193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 15641093 - 15641047
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggtttt 15641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 20069676 - 20069570
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| | ||||||||||||||||||| ||||||||||  |||||||| ||||           |||||||| ||||||||| |||| ||||||||    
T  20069676 gggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgtaaaaaaaag--tttagattatgtccctatcatttgagattctt 20069579  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  20069578 ccacttttg 20069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 31082185 - 31082292
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||| |||||||||||| |||||| ||||||||||   ||||||| ||||         | |||||||| ||||||||| |||| ||||||||    
T  31082185 gggtaaataccccttttcgtccctataatatgagcgaattccaggtttggtccctgtaaaaaaaaag-tttagattctgtccctatcatttgagattctt 31082283  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  31082284 ccacttttg 31082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 35376502 - 35376398
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcca 329  Q
    |||||| ||||||||||||||||||||||||| ||||||  |||| ||| ||||         |||||| ||||||||||| |||||| ||| |||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgt-aaaaaaaagatttaaattttgtccctgtaatttcagaatcttcca 35376404  T
Q  330 cttttg 335  Q
    ||||||    
T  35376403 cttttg 35376398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 10122302 - 10122262
Alignment:
Q  46 ataaatggagagaattaaaagaaaaataatttagtcatatc 86  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  10122302 ataaatggagagaaataaaagaaaaataaattagtcatatc 10122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 31944328 - 31944272
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||| ||||||||||| ||||||||||||||||| || |||| ||| ||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgt 31944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 46935217 - 46935169
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttg 275  Q
    |||| |||||||||||| |||||| ||||||||||||||| ||||||||    
T  46935217 gggttaatacctcttttggtccctataatattagcgaatttcgattttg 46935169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 12520707 - 12520746
Alignment:
Q  295 tttagattttgtccctataattttagattcttccactttt 334  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  12520707 tttagattttgtccctataatttcagattcctccactttt 12520746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 26252337 - 26252376
Alignment:
Q  296 ttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttg 26252376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 36887680 - 36887719
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaatt 36887719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 4356253 - 4356219
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||| |||||||||||||||||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatt 4356219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 15641027 - 15640985
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||| ||||||| |||||| |||||||||||||||||    
T  15641027 gatttagattatgtccctgtaatttcagattcttccacttttg 15640985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 34064294 - 34064252
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||| || |||||| |||||||||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttg 34064252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 16702806 - 16702871
Alignment:
Q  8 gtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaata 73  Q
    |||||| | |||||| |||||||| |||| | ||||| |||||| ||||||||||||| |||||||    
T  16702806 gtcacatatccaaatcaaaaatatttggagatacatacataaatagagagaattaaaaaaaaaata 16702871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42098394 - 42098463
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    |||||||||||  ||||| |||| ||| || |||| |||| ||||||| ||| |||||||||||||||||    
T  42098394 ctagtcacaaattcaaatcaaaagtatttgaacacgcatacataaatgcagataattaaaagaaaaataa 42098463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 48579858 - 48579903
Alignment:
Q  219 aaaattatgggtaaatacctcttttcgtccctgtaatattagcgaa 264  Q
    ||||||| || | |||||||||||||||||||||||||||| ||||    
T  48579858 aaaattaaggattaatacctcttttcgtccctgtaatattaacgaa 48579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 3018388 - 3018332
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||| |||| ||||||||||||||||||||||| |||||| || |||| ||| ||||    
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgt 3018332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 7819398 - 7819346
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtca 279  Q
    ||||||||| || |||||||||| |||||||||||||||| || |||| ||||    
T  7819398 gggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtca 7819346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 11870895 - 11870958
Alignment:
Q  10 cacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    |||||| ||||||||||||||| |  ||||||||| |||||| || | |||||||||||||||||    
T  11870895 cacaaatccaaataaaaaatatttaaacacacatacataaat-gaaaaaattaaaagaaaaataa 11870958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 13131943 - 13131979
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatt 13131979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 23979280 - 23979171
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | |||||    
T  23979280 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 23979181  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  23979180 tccacttttg 23979171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 31799636 - 31799748
Alignment:
Q  223 ttatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagat 322  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||  ||| ||||         |||||||||||||||||| |||||| ||||    
T  31799636 ttatgggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagat 31799735  T
Q  323 tcttccacttttg 335  Q
    |||||||||||||    
T  31799736 tcttccacttttg 31799748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 7125923 - 7126025
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccact 331  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||         ||||||||||||||||||||||||| |||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtccctataatttcagattcttccact 7126021  T
Q  332 tttg 335  Q
    ||||    
T  7126022 tttg 7126025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 18336834 - 18336726
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| |||||||    
T  18336834 tgggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336736  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  18336735 tccacttttg 18336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 17762660 - 17762552
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| ||| ||||         ||||||||||||||||| ||||||| ||||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattctt 17762561  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  17762560 ccacttttg 17762552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 14143902 - 14144009
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 14144000  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14144001 ccacttttg 14144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 41001729 - 41001623
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| |||  |||         ||||||||||||||||||||||||| |||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaa-gatttagattttgtccctataatttcagattcttc 41001631  T
Q  328 cacttttg 335  Q
    ||||||||    
T  41001630 cacttttg 41001623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 335
Target Start/End: Original strand, 14411688 - 14411805
Alignment:
Q  218 taaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattt 317  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||| ||||||||  | ||||||    
T  14411688 taaaatttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaattt 14411787  T
Q  318 tagattcttccacttttg 335  Q
     |||||||||||||||||    
T  14411788 cagattcttccacttttg 14411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 7126295 - 7126187
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| |||  |||         |||||||||||||||||| |||||| | ||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  7126195 ccacttttg 7126187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 14144279 - 14144171
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 14144180  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14144179 ccacttttg 14144171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 24837169 - 24837277
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||         |||||||||||||||| | |||||| | ||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  24837269 ccacttttg 24837277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 24837547 - 24837439
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  327 ccacttttg 335  Q
    | |||||||    
T  24837447 ctacttttg 24837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 18600309 - 18600385
Alignment:
Q  6 tagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    ||||||||||||||||| |||||||| |||  ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  18600309 tagtcacaaacccaaatcaaaaatatttgggtacacatacataaatggagagaattaaaagaaaactaaattagtca 18600385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 18336466 - 18336576
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||          |||||||||||||||||| |||||| ||||||    
T  18336466 tgggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 18336565  T
Q  325 ttccacttttg 335  Q
    |||| ||||||    
T  18336566 ttccgcttttg 18336576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 24651077 - 24650969
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||  |||          || |||||||| ||||| |||||||||||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattctt 24650978  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  24650977 ccacttttg 24650969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 17762283 - 17762390
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||         |||||| ||||||| ||| |||||| ||||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttatattttgttcctgtaatttcagattctt 17762381  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  17762382 ccacttttg 17762390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 24074303 - 24074411
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||| ||| ||||          |||||||||||||| || |||||| | ||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  24074403 ccacttttg 24074411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 29445183 - 29445076
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||| ||||||||||||||||||||||||||||||||  |||| ||| ||||         |||||||||||||||| | |||||| ||||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtc-ctgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 29445085  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  29445084 ccacttttg 29445076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 31800013 - 31799910
Alignment:
Q  231 aaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccac 330  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||| ||||         |||||||||||||||| | |||||| |||||||||| |    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtc-ctgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctc 31799915  T
Q  331 ttttg 335  Q
    |||||    
T  31799914 ttttg 31799910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32274451 - 32274374
Alignment:
Q  5 ctagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    |||||||||| | ||||| |||||||| |||||||||||| |||||| || |||||||| |||||||||| |||||||    
T  32274451 ctagtcacaatcgcaaatcaaaaatatttggacacacatacataaattgaaagaattaagagaaaaataaattagtca 32274374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 6817123 - 6817230
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||         |||||||||| ||||| | |||||| ||||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt-aaaaaaaagatttagattatgtccatgtaatttcagattctt 6817221  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  6817222 ccacttttg 6817230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 29444803 - 29444914
Alignment:
Q  224 tatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagatt 323  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||| |||||| ||| ||||         |||||||||| ||||| | |||||| | |||    
T  29444803 tatggggaaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatatt 29444902  T
Q  324 cttccacttttg 335  Q
    |||| |||||||    
T  29444903 cttctacttttg 29444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 993751 - 993806
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgt 993806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 994124 - 994016
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||| |||| ||||| |||||| ||||||||| || |||| ||| ||||         |||||||||||||||||| |||||  |||||||    
T  994124 tgggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattct 994026  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  994025 tccacttttg 994016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 4918989 - 4919098
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||| || |||||||||||||||||| || |||| ||  ||||          |||||||||||||||||| |||||| | |||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  4919089 tccacttttg 4919098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 4919366 - 4919320
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggtttt 4919320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 23154814 - 23154744
Alignment:
Q  12 caaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    ||||| ||||| ||| |||| || ||| ||||| ||||||||||||||||||||||||| ||| |||||||    
T  23154814 caaactcaaatcaaacatatttgaacatacatagataaatggagagaattaaaagaaaagtaaattagtca 23154744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 24650704 - 24650741
Alignment:
Q  229 gtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatt 24650741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 27158991 - 27159098
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| ||||||||||||||||| ||||||||||||||||| |  |||| ||| | ||         |||||| ||||||||||| |||||| ||||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagt-taaaaaaagatttaaattttgtccctgtaatttcagattctt 27159089  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  27159090 ccacttttg 27159098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 27159327 - 27159227
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccact 331  Q
    ||||||||||||||||| ||||||||||||||||| || |||| |||  |||          ||||||||||||||||| |||||||| ||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  332 tttg 335  Q
    ||||    
T  27159230 tttg 27159227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 30512288 - 30512395
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||||||||||||||| |||||  | |||| ||| ||||         ||||||||||| |||||| |||||| ||||| ||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagattttt 30512386  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  30512387 ccacttttg 30512395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 30552628 - 30552735
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||||||||||||||| |||||  | |||| ||| ||||         ||||||||||| |||||| |||||| ||||| ||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagattttt 30552726  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  30552727 ccacttttg 30552735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 32233967 - 32234007
Alignment:
Q  295 tttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttg 32234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 41425830 - 41425779
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtc 278  Q
    |||| |||||||||||| ||||||| ||||| ||||||||| ||||||||||    
T  41425830 gggttaatacctcttttggtccctgcaatatcagcgaattctgattttggtc 41425779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 6817432 - 6817391
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttg 6817391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 9266975 - 9267083
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  9267075 ccacttttg 9267083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 14171964 - 14171856
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| ||||||  |||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14171864 ccacttttg 14171856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 16721991 - 16722099
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||          ||||||||||||||| | |||||| ||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  16722091 ccacttttg 16722099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 33372782 - 33372674
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||  ||||         |||||||||||||||||| |||||| ||||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  33372682 ccacttttg 33372674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 45969915 - 45970023
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  45970015 tcacttttg 45970023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 14262414 - 14262307
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||| ||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgtt 14262315  T
Q  327 ccactttt 334  Q
    ||||||||    
T  14262314 ccactttt 14262307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 49986527 - 49986636
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||          |||||||||||||||||| |||||| |||||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  326 tccacttttg 335  Q
    || |||||||    
T  49986627 tctacttttg 49986636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 16722369 - 16722261
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||| |  |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  16722269 ccacttttg 16722261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 35995678 - 35995786
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||           |||||||||||||||| |||||| ||||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  35995778 ccacttttg 35995786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 14162255 - 14162141
Alignment:
Q  220 aaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataatttta 319  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||| | |||||| |    
T  14162255 aaattttgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaagagatttagattttgtccttgtaatttca 14162157  T
Q  320 gattcttccacttttg 335  Q
    ||||||||||||||||    
T  14162156 gattcttccacttttg 14162141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 43572379 - 43572497
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataatt 316  Q
    ||||||||  |||||||||| ||||||||| ||||||||||||||||||| || |||| ||| ||||          ||||||||||||||||| |||||    
T  43572379 ataaaatttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatt 43572478  T
Q  317 ttagattcttccacttttg 335  Q
    | |||||||||||||||||    
T  43572479 tcagattcttccacttttg 43572497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 226 - 327
Target Start/End: Original strand, 19720332 - 19720433
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | |||||    
T  19720332 tgggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 19720431  T
Q  326 tc 327  Q
    ||    
T  19720432 tc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 14262036 - 14262144
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||| ||||||||||||||||||||||||||||||||| |||| |||  |||          ||||||||||||||||| |||||| ||||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14262136 ccacttttg 14262144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 19113143 - 19113035
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||| ||| ||||         |||||||||||| ||||| |||||| ||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  327 ccacttttg 335  Q
    | |||||||    
T  19113043 ctacttttg 19113035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 20854073 - 20853966
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  20854073 gggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtc-ctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20853975  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  20853974 ccacttttg 20853966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 33372406 - 33372514
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||| ||  ||||         |||||||||||||||||| |||||| ||||| ||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattatt 33372505  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  33372506 ccacttttg 33372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 5800602 - 5800713
Alignment:
Q  224 tatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagatt 323  Q
    |||||||||||||||||||||||||||||||||||| |||||| || |||| ||| ||||         |||||||||| ||||||| |||||| | |||    
T  5800602 tatgggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatt 5800701  T
Q  324 cttccacttttg 335  Q
    |||||| |||||    
T  5800702 cttccatttttg 5800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 9267352 - 9267296
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 9267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 14171587 - 14171694
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  |  ||||         |||||||||||||||||| |||||| | ||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgt-aaaaaaaagatttagattttgtccctgtaatttcaaattctt 14171685  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  14171686 ccacttttg 14171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 35996053 - 35995997
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgt 35995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 5800983 - 5800875
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||| ||| ||||         |||||||||||||||| | |||||| | |||||    
T  5800983 tgggttaatacctcttttcgtccctgtaatattagcgaattccg-gtttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 5800885  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  5800884 tccacttttg 5800875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 11003727 - 11003840
Alignment:
Q  222 attatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttaga 321  Q
    |||| ||||||||||||||||| |||| |||||||||| ||||||||| |||| ||| ||||         || ||||||||||||| | |||||| |||    
T  11003727 attaagggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcaga 11003826  T
Q  322 ttcttccacttttg 335  Q
    ||||||||||||||    
T  11003827 ttcttccacttttg 11003840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 19112764 - 19112873
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| ||| ||||          ||||||||||||||||||  ||||| | |||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  19112864 tccacttttg 19112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 20853695 - 20853804
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||   | ||||          ||||||||||||||||||||||||| | |||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattct 20853794  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  20853795 tccacttttg 20853804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 45970294 - 45970185
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||| ||| ||||          |||||| ||||||||||| |||||| |||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattct 45970195  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  45970194 tccacttttg 45970185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 14161867 - 14161912
Alignment:
Q  223 ttatgggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  14161867 ttatgggtaaatatctcttttcgtccctgtaatattagcgaattcc 14161912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 21632891 - 21632940
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21632891 ataaaataaagggtaaatacctcttttcgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 21633274 - 21633166
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||| || |||||||||||||||||||||||| |  |||| ||| || |         |||||||||||||||||| |||||| ||||||||    
T  21633274 gggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 21633175  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  21633174 ccacttttg 21633166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 30500418 - 30500377
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 30500377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 334
Target Start/End: Original strand, 45003495 - 45003603
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||| |||  ||| || |         |||||||||||||||||| |||||| |||||||    
T  45003495 tgggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattct 45003594  T
Q  326 tccactttt 334  Q
    |||||||||    
T  45003595 tccactttt 45003603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 27946243 - 27946187
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 55071319 - 55071384
Alignment:
Q  10 cacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatt 76  Q
    |||||||||||||||||||||| ||| |||||| | |||||||||||||||||||| ||||| ||||    
T  55071319 cacaaacccaaataaaaaatatttgggcacaca-acataaatggagagaattaaaaaaaaaaaaatt 55071384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 30500043 - 30500149
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| ||||||||||||| ||||||||||||||||||||| || |||| ||| ||||          ||||||||||||||||| |||||| | ||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattctt 30500140  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  30500141 ccacttttg 30500149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 38283861 - 38283820
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttg 38283820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 3424774 - 3424830
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||| |||||||||||| ||||||||||||||||||| ||||| |||||||| ||||    
T  3424774 gggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 17465754 - 17465706
Alignment:
Q  218 taaaattatgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||    
T  17465754 taaaatcaagggtaaatacctcttttcgtccttgtaatattagcgaatt 17465706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 52553065 - 52552958
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    ||||||||| ||||||||||| ||||||||||||||||||   |||| ||| ||||         ||||||||||||||| || |||||| | |||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  328 cacttttg 335  Q
    ||||||||    
T  52552965 cacttttg 52552958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||| ||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 49986906 - 49986867
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatt 49986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 52552695 - 52552800
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnn--gatttagattttgtccctataattttagattcttcca 329  Q
    |||| |||||||||||||| |||||||||| |||| ||||||| ||| ||||           |||||||||||||||||| |||||| |||||||||||    
T  52552695 aatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaatttcagattcttcca 52552794  T
Q  330 cttttg 335  Q
    ||||||    
T  52552795 cttttg 52552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 4204705 - 4204816
Alignment:
Q  223 ttatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagat 322  Q
    ||||||||||| |||||||||||||||||||||||||  ||||| |  |||| ||  ||||         |||||||||| ||||||| |||||| ||||    
T  4204705 ttatgggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaa-gatttagattatgtccctgtaatttcagat 4204803  T
Q  323 tcttccacttttg 335  Q
    |||||||||||||    
T  4204804 tcttccacttttg 4204816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 17649384 - 17649340
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||| |||||||||| |||||||||||| ||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggtttt 17649340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 36991025 - 36990931
Alignment:
Q  239 cttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccactttt 334  Q
    ||||| |||||||||||||||||||||| || |||| ||| ||||         | |||||||| ||||||| |||||||||||||||||||||||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccactttt 36990931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 37016465 - 37016371
Alignment:
Q  239 cttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccactttt 334  Q
    ||||| |||||||||||||||||||||| || |||| ||| ||||         | |||||||| ||||||| |||||||||||||||||||||||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccactttt 37016371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 45003873 - 45003766
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||  || |||||||||||||||||||||||||| || |||| ||  ||||         ||||||||||| ||||||||||||| | ||||||    
T  45003873 gggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaa-gatttagatttagtccctataatttcatattctt 45003775  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  45003774 ccacttttg 45003766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 3426026 - 3425979
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggtttt 3425979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 15328461 - 15328496
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattag 260  Q
    |||||||||||||||||||||| |||||||||||||    
T  15328461 atgggtaaatacctcttttcgttcctgtaatattag 15328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 17465367 - 17465414
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||||    
T  17465367 gggtaaatacctctttttgtccttttaatattagcgaattctgatttt 17465414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 35740883 - 35740922
Alignment:
Q  295 tttagattttgtccctataattttagattcttccactttt 334  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  35740883 tttagattttgtccctgtaattttaaattcttccactttt 35740922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 1067719 - 1067765
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtc 278  Q
    |||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  1067719 aatacctcttttggtccttgtaatatcagcgaattctgattttggtc 1067765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 15328772 - 15328730
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||||| |||||| ||||| |||||||||||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttg 15328730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 335
Target Start/End: Original strand, 38283553 - 38283658
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcca 329  Q
    |||||| |||||||| |||||||||||||| ||||||||| |||| |||  |||          ||||||||||||| |||||||||| | ||| |||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  330 cttttg 335  Q
    ||||||    
T  38283653 cttttg 38283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 35741962 - 35741921
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    |||| |||||| ||||| ||||||||||||||||||||||||    
T  35741962 gggttaataccacttttggtccctgtaatattagcgaattcc 35741921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 43572702 - 43572661
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||| ||||||| |||||| |||||||||||||||||    
T  43572702 atttagattctgtccctgtaatttcagattcttccacttttg 43572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 35740816 - 35740864
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||| ||||    
T  35740816 tgggttaatactacttttggtccctgtaatattagcgaattccggtttt 35740864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 17850964 - 17850856
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| ||||||||         | |||||||||||||||| |||||| ||||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  17850864 ccacttttg 17850856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 17850586 - 17850694
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |         ||||||||||||||| || |||||| |||||||    
T  17850586 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctat-aaaaaaaagatttagattttgtctctgtaatttaagattct 17850684  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  17850685 tccacttttg 17850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 15106444 - 15106337
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||          ||||||||||||||||| |||||| |||||||    
T  15106444 tgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattct 15106347  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  15106346 tccacttttg 15106337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 23806331 - 23806222
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| | |||||    
T  23806331 tgggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23806232  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  23806231 tccacttttg 23806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 23854687 - 23854796
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| | |||||    
T  23854687 tgggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23854786  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  23854787 tccacttttg 23854796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 26135828 - 26135925
Alignment:
Q  238 tcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||         |||||||||||||||||| |||||| ||||||||| |||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttg 26135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 17463469 - 17463361
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||  | ||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  17463369 ccacttttg 17463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 15106067 - 15106175
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||  || ||||         |||||||||||||||||| |||||||||||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  15106167 ccacttttg 15106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 19251471 - 19251578
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 19251569  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  19251570 ccacttttg 19251578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 23855073 - 23855025
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23855073 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 333
Target Start/End: Original strand, 23046707 - 23046813
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| |||||||| ||||||||||| |||||||| || |          ||||||||| ||||||| |||||| ||||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattctt 23046806  T
Q  327 ccacttt 333  Q
    |||||||    
T  23046807 ccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 26560932 - 26560886
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgatttt 26560886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 26236127 - 26236235
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| |||||||||||| |||||||||||||||||| | |||| ||| ||||         |||||| ||||||||||| |||||| ||||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  26236227 tcacttttg 26236235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 26236472 - 26236365
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| ||| ||           |||||||||||||||||| |||||| ||||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc-cttggaaaaaaaagatttagattttgtccctgtaatttcagattctt 26236374  T
Q  327 ccacttttg 335  Q
    ||| |||||    
T  26236373 ccatttttg 26236365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 15731700 - 15731625
Alignment:
Q  6 tagtcacaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    |||| |||||||||||| |||||||| | |||||||||| |||||| || ||||||||||||||||||| |||||||    
T  15731700 tagttacaaacccaaatcaaaaatattttgacacacatacataaat-gaaagaattaaaagaaaaataaattagtca 15731625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 22263571 - 22263515
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgt 22263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 26560556 - 26560662
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||| ||||||||||||||||||||||| |||||| ||||||| ||| ||||         ||||||||||| |||||| |||||| ||||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgt--aaaaaaagatttagatttagtccctgtaatttcagattctt 26560653  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  26560654 ccacttttg 26560662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 44099001 - 44098894
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | |||||||  ||||          ||||||||| ||||||| |||||| |||||||    
T  44099001 tgggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattct 44098902  T
Q  326 tccacttt 333  Q
    ||||||||    
T  44098901 tccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 20499133 - 20499015
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataatt 316  Q
    ||||||||  |||||||||||| ||||| || ||| ||||||| | ||||||| |||| ||||||||         |||||||||||||||||| |||||    
T  20499133 ataaaatttagggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatt 20499034  T
Q  317 ttagattcttccacttttg 335  Q
    | |||||||| ||||||||    
T  20499033 tcagattctttcacttttg 20499015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 26294597 - 26294664
Alignment:
Q  13 aaacccaaataaaaaa-tatctggacacacatatataaatggagagaattaaaagaaaaataatttag 79  Q
    |||||||||||||||| ||| |||||||||||| |||||  |||||||||||||||||||||| ||||    
T  26294597 aaacccaaataaaaaaatatttggacacacatacataaaatgagagaattaaaagaaaaataaattag 26294664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 30390458 - 30390567
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||  || ||||          | ||||||||||||||| |||||| | |||||    
T  30390458 tggggaaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattct 30390557  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  30390558 tccacttttg 30390567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 42670716 - 42670773
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||| ||| ||||    
T  42670716 tgggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 19251847 - 19251791
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 19251791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 23047960 - 23047912
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttg 275  Q
    |||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaattccggttttg 23047912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 42671098 - 42670989
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||| ||||||||| |||||||||||| |  |||| ||| ||||         |||||||||| ||||||| |||||| | ||| |    
T  42671098 tgggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatttt 42670999  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  42670998 tccacttttg 42670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 13254497 - 13254605
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||| ||| |||||||||||||||||||  | ||||  || ||||         |||||||||||||||| | |||||| ||||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  13254597 tcacttttg 13254605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 17463091 - 17463148
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| |||| ||| ||||    
T  17463091 tgggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgt 17463148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 30958680 - 30958791
Alignment:
Q  223 ttatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagat 322  Q
    |||||||| |||||| ||||| |||||||||||||||||||||| || |||| ||| ||||         | |||||||||  ||||||| |||| ||||    
T  30958680 ttatgggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagatttcatccctatcatttgagat 30958778  T
Q  323 tcttccacttttg 335  Q
    |||||||||||||    
T  30958779 tcttccacttttg 30958791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 20498747 - 20498803
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||||||  ||||||||||||||||| || |||| ||| ||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgt 20498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 26136196 - 26136156
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  26136196 tgggtaaatacctcttttcgtccttgtaatattaacgaatt 26136156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 34548573 - 34548613
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  34548573 tgggtaaatacttcttttcgtccctgtaatattagtgaatt 34548613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 12419100 - 12419053
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| ||||    
T  12419100 gggttaataccacttttggtccctgtaatattagcgaattccggtttt 12419053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 12431160 - 12431113
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| ||||    
T  12431160 gggttaataccacttttggtccctgtaatattagcgaattccggtttt 12431113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 21482190 - 21482151
Alignment:
Q  295 tttagattttgtccctataattttagattcttccactttt 334  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  21482190 tttagattttgtccctgtcattttagattcttccactttt 21482151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 30960049 - 30960002
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| ||||    
T  30960049 gggttaataccacttttggtccctgtaatattagcgaattccggtttt 30960002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 22263257 - 22263299
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  22263257 gatttagattttgtccctgtaatttcatattcttccacttttg 22263299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 23806022 - 23806060
Alignment:
Q  297 tagattttgtccctataattttagattcttccacttttg 335  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttg 23806060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 26178824 - 26178765
Alignment:
Q  13 aaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    ||||||||||||||||||| ||  |  ||||| |||||| ||||||||||||||||||||||    
T  26178824 aaacccaaataaaaaatatttg--cggacatacataaatcgagagaattaaaagaaaaataa 26178765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 33290435 - 33290385
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattc 267  Q
    ||||| ||| |||| |||||| ||||| |||||||||||||||||||||||    
T  33290435 ataaatttaagggttaataccgcttttggtccctgtaatattagcgaattc 33290385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 34546734 - 34546684
Alignment:
Q  24 aaaaatatctggacacacatatataaatggagagaattaaaagaaaaataa 74  Q
    |||||||| |||||||| | | |||||||||||||||| ||||||||||||    
T  34546734 aaaaatatttggacacataaacataaatggagagaattgaaagaaaaataa 34546684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 39878451 - 39878410
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  39878451 tgggtaaatacctctttttgtcc-tgtaatattagcgaattcc 39878410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 23854977 - 23854936
Alignment:
Q  294 atttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttg 23854936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 39878103 - 39878210
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||| |||| |||| |||||||||||||||||||| |||| ||| ||||          ||||||||| |||  || |||||| ||||||||    
T  39878103 gggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattctt 39878201  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  39878202 ccacttttg 39878210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 39826425 - 39826316
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| |||||||    
T  39826425 tgggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 39826326  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  39826325 tccacttttg 39826316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 39826050 - 39826158
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  39826150 ccacttttg 39826158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 18462286 - 18462393
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattctt 18462384  T
Q  327 ccacttttg 335  Q
    ||| |||||    
T  18462385 ccatttttg 18462393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 24467629 - 24467736
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattctt 24467727  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  24467728 ccacttttg 24467736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 17606693 - 17606578
Alignment:
Q  218 taaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattt 317  Q
    |||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||| | ||||||    
T  17606693 taaatttaagggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--aaaaaaagatttagattttgtccttgtaattt 17606596  T
Q  318 tagattcttccacttttg 335  Q
     |||||||||||||||||    
T  17606595 cagattcttccacttttg 17606578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 30299232 - 30299339
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtc-ctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 30299330  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  30299331 ccacttttg 30299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 39711450 - 39711342
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| ||| ||||         |||||||||||||||||  |||||| | ||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  39711350 ccacttttg 39711342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 30299610 - 30299501
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||| |||||||| ||||||||||||| |||| || |||| ||  ||||         |||||||||||||||||| ||||||||||||||    
T  30299610 tgggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattct 30299511  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  30299510 tccacttttg 30299501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 34749484 - 34749375
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| |||  |||         |||||||||||| ||||| |||||| |||||||    
T  34749484 tgggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattct 34749385  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  34749384 tccacttttg 34749375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 4906962 - 4907070
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||| ||||||   |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  4907062 ccacttttg 4907070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 4907340 - 4907232
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| || ||||| |||||||||||||||||||||||  |||| ||| ||||         |||||||||||||||||| |||||| ||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  4907240 ccacttttg 4907232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 17606307 - 17606360
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 17606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 33628690 - 33628798
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| ||| | ||         |||||||||||||||||  |||||| ||||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctt 33628789  T
Q  327 ccacttttg 335  Q
     ||||||||    
T  33628790 tcacttttg 33628798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 52058386 - 52058278
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||| ||  ||||         |||||||||| ||||||| |||||| ||||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  52058286 ccacttttg 52058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 52058008 - 52058119
Alignment:
Q  224 tatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagatt 323  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||  ||||         |||||||| | ||||||| |||||| |||||    
T  52058008 tatgggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagatt 52058107  T
Q  324 cttccacttttg 335  Q
    ||||||||||||    
T  52058108 cttccacttttg 52058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 334
Target Start/End: Original strand, 29696565 - 29696671
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||  |||||| | ||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt-aaaaaaaagatttagattttgtccccgtaatttcatattctt 29696663  T
Q  327 ccactttt 334  Q
    ||||||||    
T  29696664 ccactttt 29696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 39971025 - 39970915
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnn-gatttagattttgtccctataattttagattc 324  Q
    ||||||||||||||||||||||| |||||||||| |||||| || |||| ||| ||||          |||||||||||||||||| ||||||||||| |    
T  39971025 tgggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcc 39970926  T
Q  325 ttccacttttg 335  Q
    |||||||||||    
T  39970925 ttccacttttg 39970915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 8292803 - 8292912
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||| |||| ||| ||||         ||||||||||||||||||  ||||| | |||||    
T  8292803 tgggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattct 8292902  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  8292903 tccacttttg 8292912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 33629068 - 33628960
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||| ||| ||||          | || |||||||||||| |||||| ||||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  33628968 ccacttttg 33628960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 24468003 - 24467897
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||||||||||   | ||||||||||| |||||||| |||| ||| ||||         |||||||||||||||||| |||||| |||||||    
T  24468003 tgggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 24467907  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  24467906 tccacttttg 24467897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 27039638 - 27039689
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtc 278  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtc 27039689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 8293194 - 8293077
Alignment:
Q  219 aaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattt 317  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||   |||| ||| ||||          |||||||||||||||||| ||||||    
T  8293194 aaaattaagggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattt 8293095  T
Q  318 tagattcttccacttttg 335  Q
     | |||||||||||||||    
T  8293094 catattcttccacttttg 8293077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 18342397 - 18342339
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||| ||||||||||||||||||||||||||| || |||| ||| ||||    
T  18342397 atgggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 34749132 - 34749245
Alignment:
Q  221 aattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttag 320  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||| |||||| ||| || |         |||||||||||||||||  |||||| |     
T  34749132 aattaagggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctat-aaaaaaaagatttagattttgtccccgtaatttcat 34749230  T
Q  321 attcttccacttttg 335  Q
    |||||||||||||||    
T  34749231 attcttccacttttg 34749245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 18462658 - 18462554
Alignment:
Q  231 aaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccac 330  Q
    |||||||||||||| |||||||||||||||| ||||||| |||| ||   |||         |||||||||||||||||  |||||| ||||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  331 ttttg 335  Q
    |||||    
T  18462558 ttttg 18462554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 29696935 - 29696828
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||   |||||||||||||||||||| |||| ||||||||          | ||||||||||||| | |||||| ||||||||    
T  29696935 gggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaa-aattagattttgtccatgtaatttcagattctt 29696837  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  29696836 ccacttttg 29696828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 39711073 - 39711180
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||         |||||||||||||||| | |||||| | |||||    
T  39711073 tgggtaaatacctcttttcgt-cttgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccttgtaatttcatattct 39711170  T
Q  326 tccacttttg 335  Q
    ||||||||||    
T  39711171 tccacttttg 39711180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 20995698 - 20995754
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||| ||| ||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 43539349 - 43539455
Alignment:
Q  229 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcc 328  Q
    ||||||| |||||||| ||| ||||| |||||| |||||||||||| |||  |||         |||||||||||||||||| |||||||| ||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  329 acttttg 335  Q
    |||||||    
T  43539449 acttttg 43539455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 48072339 - 48072231
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||  ||||||||||| |||||||| |||| |||  |||          ||||||||| ||||||| |||||| | ||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattctt 48072240  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  48072239 ccacttttg 48072231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 13230111 - 13230071
Alignment:
Q  226 tgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  13230111 tgggtaaatacctcttttcgtctctgaaatattagcgaatt 13230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 20996050 - 20996006
Alignment:
Q  222 attatgggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||    
T  20996050 attaagggttaatacctctttttgtccctgtaatattagcgaatt 20996006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 43400753 - 43400809
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||| |||||||||||||||| || |||||| ||||||||||| |||||||| ||||    
T  43400753 gggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 39970645 - 39970684
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatt 39970684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 43539725 - 43539678
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||| |||| ||||||||||||||||||||||||| ||||||| ||||    
T  43539725 gggttaatagctcttttcgtccctgtaatattagcaaattccggtttt 43539678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 42510388 - 42510346
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggtttt 42510346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 26271263 - 26271163
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||| |||||||||||| ||||| |||||||||||||| | || |||||||| ||||          ||||||||| ||||||||| |||| ||||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgtaaaaaaaaacatttagattctgtccctatcatttgagattctt 26271164  T
Q  327 c 327  Q
    |    
T  26271163 c 26271163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 17500769 - 17500825
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    |||| ||||||  |||| ||||||||||||||||||||||||| |||| ||| ||||    
T  17500769 gggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 42510081 - 42510121
Alignment:
Q  294 atttagattttgtccctataattttagattcttccactttt 334  Q
    ||||||||||||||||| |||||| | ||||||||||||||    
T  42510081 atttagattttgtccctgtaatttcatattcttccactttt 42510121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 12355 - 12252
Alignment:
Q  232 aatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccact 331  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| || |         |||||||||||||||||| |||||| |||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  332 tttg 335  Q
    ||||    
T  12255 tttg 12252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 9481180 - 9481290
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||| ||||||| |||||| | ||||    
T  9481180 atgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattc 9481279  T
Q  325 ttccacttttg 335  Q
    ||||| |||||    
T  9481280 ttccaattttg 9481290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 26385276 - 26385386
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattc 324  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||| |||  |||         |||||||||||||||||| |||||||| ||||    
T  26385276 atgggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattc 26385375  T
Q  325 ttccacttttg 335  Q
    |||||||||||    
T  26385376 ttccacttttg 26385386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 32017881 - 32017774
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 32017783  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  32017782 ccacttttg 32017774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 26385649 - 26385544
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttcca 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||         ||||||||| |||| |||  ||||| | |||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  330 cttttg 335  Q
    ||||||    
T  26385549 cttttg 26385544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 9154884 - 9154988
Alignment:
Q  232 aatacctcttttcgtccctgtaata-ttagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttccac 330  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||         |||||||||||||||||| |||||| |||||||||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  331 ttttg 335  Q
    |||||    
T  9154984 ttttg 9154988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 24732315 - 24732208
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||         |||||||||||||||| | |||||| | ||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattcc-aatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  24732216 ccacttttg 24732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 18500315 - 18500422
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||| | ||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgt-aagaaaaagatttagattttgtccctgtaatttcatattctt 18500413  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  18500414 ccacttttg 18500422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 24731935 - 24731991
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 33630705 - 33630776
Alignment:
Q  11 acaaacccaaataaaaaatatctggacacacatatataaatggagagaattaaaagaaaaataatttagtca 82  Q
    ||||||| |||||||||||||  ||  ||||||| ||||||||||||||||||||||||||||| |||||||    
T  33630705 acaaacctaaataaaaaatattaggctacacatacataaatggagagaattaaaagaaaaataaattagtca 33630776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 19284130 - 19284237
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    ||||||||||||||||||| | |||||||||||||||||||  |||| |||   ||         |||||||||||||||||| |||||| |||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  328 cacttttg 335  Q
    ||||||||    
T  19284230 cacttttg 19284237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 18500707 - 18500668
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatt 18500668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 30617967 - 30618014
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattctgatttt 30618014  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 30618272 - 30618232
Alignment:
Q  294 atttagattttgtccctataattttagattcttccactttt 334  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttt 30618232  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 2299691 - 2299644
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattccggtttt 2299644  T

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Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 10321737 - 10321780
Alignment:
Q  231 aaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggtttt 10321780  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 33714479 - 33714530
Alignment:
Q  223 ttatgggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||| ||||    
T  33714479 ttatggctaaataaatcttttcgtccctgtaatattagcgaattccggtttt 33714530  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 9481494 - 9481452
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||||| | |||||| |||||||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttg 9481452  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 33637625 - 33637667
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||||| | | ||||||||||||||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttg 33637667  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 2299617 - 2299580
Alignment:
Q  297 tagattttgtccctataattttagattcttccactttt 334  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttt 2299580  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 30458903 - 30458939
Alignment:
Q  230 taaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatt 30458939  T

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Target: scaffold0361 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 4552 - 4671
Alignment:
Q  217 ataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataat 315  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||          |||||| ||||||||||| ||||    
T  4552 ataaaatcaagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaat 4651  T
Q  316 tttagattcttccacttttg 335  Q
    || ||||||||| |||||||    
T  4652 ttgagattcttctacttttg 4671  T

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Target: scaffold0361; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 4940 - 4833
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||  || ||||         |||||||||||||||| | |||||| | ||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgt-aaaaataagatttagattttgtccttgtaatttcatattctt 4842  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  4841 ccacttttg 4833  T

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Target: scaffold0449 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 7578 - 7469
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt-nnnnnnnnngatttagattttgtccctataattttagattct 325  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||          |||||||||||||||||| |||||| |||||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  326 tccacttttg 335  Q
    || |||||||    
T  7478 tctacttttg 7469  T

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Target: scaffold0449; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 7227 - 7332
Alignment:
Q  228 ggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattcttc 327  Q
    ||||||||||||||||||||| |||||||||||||||||| | | || ||  ||||         |||||||||||||||||| |||||| | |||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  328 cacttt 333  Q
    ||||||    
T  7327 cacttt 7332  T

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Target: scaffold0185 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 331
Target Start/End: Original strand, 3869 - 3973
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||         |||||||||| ||||||| |||||| | ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T
Q  327 ccact 331  Q
    |||||    
T  3969 ccact 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 8700 - 8592
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||  ||||| || |||| ||||||||||||||||| |||| ||| || |         |||||||||||||||||| |||||||||||||||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  8600 ccacttttg 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 8325 - 8364
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatt 8364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 1411 - 1518
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataattttagattctt 326  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||||||| ||| ||||         |||||||||| ||||||| |||||| ||||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgt-aaaaaaaagatttagattatgtccctgtaatttcagattctt 1509  T
Q  327 ccacttttg 335  Q
    |||||||||    
T  1510 ccacttttg 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 1784 - 1737
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgatttt 274  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggtttt 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 6057 - 6001
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 4667 - 4708
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattcc 268  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattcc 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 5135 - 5018
Alignment:
Q  216 cataaaattatgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgtnnnnnnnnngatttagattttgtccctataat 315  Q
    |||||||| | ||||||||||| |||||||||| |||||||||||||||||||| |||| ||| ||            |||||||||| |||||| ||||    
T  5135 cataaaataaagggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtc-ctagtaaaaaaaatatttagatttagtccctgtaat 5038  T
Q  316 tttagattcttccacttttg 335  Q
    ||||||||||||||||||||    
T  5037 tttagattcttccacttttg 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 4880 - 4919
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaatt 266  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  4880 gggtaaatacctctttttgttcctgtaatattagcgaatt 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 16006 - 15950
Alignment:
Q  227 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttggtcactgt 283  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||| ||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgt 15950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 210 - 171
Alignment:
Q  295 tttagattttgtccctataattttagattcttccactttt 334  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  210 tttagattttgtccctataatttcagattcctccactttt 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 286 - 328
Alignment:
Q  293 gatttagattttgtccctataattttagattcttccacttttg 335  Q
    |||||||||||| |||| ||||||| |||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttg 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 5914 - 5864
Alignment:
Q  225 atgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttg 275  Q
    |||||| |||||||||||| |||| |||||||||||||||||  |||||||    
T  5914 atgggttaatacctcttttggtccatgtaatattagcgaattttgattttg 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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