View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18638_low_3 (Length: 680)
Name: NF18638_low_3
Description: NF18638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18638_low_3 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
| [»] scaffold0958 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 593; Significance: 0; HSPs: 51)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 593; E-Value: 0
Query Start/End: Original strand, 1 - 633
Target Start/End: Original strand, 6555381 - 6556013
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555381 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
6555480 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagttcaatggcggacgag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555481 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagttcaatggcggacgag |
6555580 |
T |
|
| Q |
201 |
aagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttcc |
300 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555581 |
aagaaatggctgaaagtaacctgttggttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttcc |
6555680 |
T |
|
| Q |
301 |
aaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttct |
400 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555681 |
aaattggctaaggggttgtcatttacccaacttagtatctcttgaacttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttct |
6555780 |
T |
|
| Q |
401 |
ctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaat |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555781 |
ctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatggcaataattcaacaattgttccattcaagtcccttgaat |
6555880 |
T |
|
| Q |
501 |
atttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555881 |
atttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag |
6555980 |
T |
|
| Q |
601 |
caccttacctcaacatcttccttctttacaaaa |
633 |
Q |
| |
|
|| |||||||||||||| ||||||||||| |
|
|
| T |
6555981 |
agtattgcctcaacatcttccatctttacaaaa |
6556013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 1 - 665
Target Start/End: Original strand, 6521075 - 6521733
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521075 |
gctaagtaatcttcagaccctgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
6521174 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagttcaatggcggacgag |
200 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
6521175 |
catattaaagggttgggtaatgttagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatacagagttcaatggcggaagag |
6521274 |
T |
|
| Q |
201 |
aagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttcc |
300 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| || || |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
6521275 |
aagaaatggctgaaagcaacctgttagtcttggaggctatacaatcaaatagcaacttgaagaagctcaacatcacacgctacaaaggtagtagatttcc |
6521374 |
T |
|
| Q |
301 |
aaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttct |
400 |
Q |
| |
|
|||||||| | | | |||||||||||||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521375 |
aaattggc---gtgattgtcatttacccaacttagtatctcttcaactgaaggattgtag---atgttcctgtttgccaacacttggacaactcccttct |
6521468 |
T |
|
| Q |
401 |
ctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaat |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6521469 |
ctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttcaat |
6521568 |
T |
|
| Q |
501 |
atttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag |
600 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6521569 |
atttgagatttcaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatataaaaaattgtcctaaattgaaaag |
6521668 |
T |
|
| Q |
601 |
caccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
|||| | |||||||| ||| ||||||||||||||||||| || |||| |||||| |||||||||| |
|
|
| T |
6521669 |
caccctgcctcaacacctttcttctttacaaaaattgaagatcagtgattgcaacgagttggagg |
6521733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 1 - 637
Target Start/End: Original strand, 6527815 - 6528451
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6527815 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
6527914 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagttcaatggcggacgag |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
6527915 |
catattaaaggcttgggtaatgtcagtgatactgcagatgctgccccattaaatttgaaagatatagaagaattgcatactgagttcaatggcggaagag |
6528014 |
T |
|
| Q |
201 |
aagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttcc |
300 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6528015 |
aagaaatggctgaaagcaacctgttagtcttggaggctatacaaccaaatagcaacttgaagaagctcaacatcacacactacaaaggtagtagatttcc |
6528114 |
T |
|
| Q |
301 |
aaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttct |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || | || |||||| ||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
6528115 |
aaattggctaaggggtagtcatttacccaacttagtatctcttcaactgaatggttgtgggttatgttcctgtttgccaccccttggacaactcccttct |
6528214 |
T |
|
| Q |
401 |
ctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaat |
500 |
Q |
| |
|
|| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6528215 |
cttaagaaactttccgtttatgattgtgaaggaataaagatcattgatgaagatttttatgacaataattcaacaattgttccattcaagtcccttcaat |
6528314 |
T |
|
| Q |
501 |
atttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag |
600 |
Q |
| |
|
|| || ||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
6528315 |
tttcgatatttgagaatatggtgaactgggagaaatggatatgtctaaggtttcctttgcttaaagagctttctataagaaattgtcctaaattgaaaag |
6528414 |
T |
|
| Q |
601 |
caccttacctcaacatcttccttctttacaaaaattg |
637 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
6528415 |
caccttgcctcaacagcttccttctttacaaaaattg |
6528451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 1 - 665
Target Start/End: Complemental strand, 6735055 - 6734385
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6735055 |
gctaaacaatcttcaaagcctatcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccagcttcatggaacaatt |
6734956 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattacatactgagttcaatg |
191 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
6734955 |
catattaaagggctgggtaatgtcagtgatcctgcagatgctgccacatcaaatttgaaagataagaagtatttagaagaattacaaatggagttcaatg |
6734856 |
T |
|
| Q |
192 |
gcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtag |
291 |
Q |
| |
|
||||| |||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6734855 |
gcggaagagaagaaatggatgaaagaagtgtgttagtcttggaggctctaaaaccaaatagcaacttgaagaagctcaacatcacacactacaaaggtag |
6734756 |
T |
|
| Q |
292 |
tagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaa |
391 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
6734755 |
tagatttccaaattggctaaggggtagtcatttacgcaacttagtatctcttgaactgaatggttgtag---atgttcctgtttgccaatacttggacaa |
6734659 |
T |
|
| Q |
392 |
ctcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagt |
491 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6734658 |
ctcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatggcaataattcaacaattgttccattcaagt |
6734559 |
T |
|
| Q |
492 |
cccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaa |
591 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| |
|
|
| T |
6734558 |
cccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctttgcttatagagctttctataacaaattgtcctaa |
6734459 |
T |
|
| Q |
592 |
attgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6734458 |
actgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
6734385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 480 - 665
Target Start/End: Original strand, 6781093 - 6781278
Alignment:
| Q |
480 |
ttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatataga |
579 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |
|
|
| T |
6781093 |
ttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctttgcttatagagctttctataac |
6781192 |
T |
|
| Q |
580 |
aaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6781193 |
aaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
6781278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 637
Target Start/End: Complemental strand, 8453755 - 8453095
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||||||||||| || |||| ||||||||| ||||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
8453755 |
gctaaacaatcttcaaagcttgtcatattttattgtggaagagcagaatgtatctgatcttaaagagttggcaaaactaaaccatcttcatggagcaatt |
8453656 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattacatactgagttcaatg |
191 |
Q |
| |
|
||||| |||||||||||||||| || ||| ||||||| |||| || ||||||||||||||| ||||||||||||||| |||| ||| |
|
|
| T |
8453655 |
gatattgaagggttgggtaatgttagcgatcttgcagattctgctactgtaaatttgaaagatacgaaatatttagaagaattacatatgaagtttgatg |
8453556 |
T |
|
| Q |
192 |
gcggacgagaaga------------aatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacaca |
279 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||| ||| ||||||||||| |||||||||| |||||||||| ||| | ||| || | |
|
|
| T |
8453555 |
gcggaagagaagaaatggatgagtcaatggctgaaagcaatgtgtcagtcttggaggctctccaaccaaatagaaacttgaagaggcttaccatctcaaa |
8453456 |
T |
|
| Q |
280 |
ctacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaattta-agggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||| ||||||||| ||||||||||||||| ||| || || |||| |||||||| | ||||| |
|
|
| T |
8453455 |
atacaaaggtaatagctttccaaattggataaggggttatcatttaccaaacttagtatctctt-aatctacagttttgtggattatgttctttgttgcc |
8453357 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
478 |
Q |
| |
|
| ||||||| |||||| | |||||||| ||||| |||| |||||||| |||||||||||||| | |||||| ||||| | || || ||||| || | |
|
|
| T |
8453356 |
accacttgggacactcccctttctcaagatgctttctatttcagactgtgatggaataaagatcataggtgaagagttttacgacagtagttcaataaat |
8453257 |
T |
|
| Q |
479 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttata |
575 |
Q |
| |
|
|| | |||| ||| |||||| ||||| ||||||| | ||| ||| |||||||||||| | || || | |||||||| |||||||||||||||||| |
|
|
| T |
8453256 |
gtgctgttcaggtctcttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttata |
8453157 |
T |
|
| Q |
576 |
tagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattg |
637 |
Q |
| |
|
|| | | ||||| |||||||||| || | |||||||| ||||||||||||||||||||| |
|
|
| T |
8453156 |
taagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttctttacaaaaattg |
8453095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 233 - 666
Target Start/End: Complemental strand, 6946138 - 6945699
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
332 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||| ||| ||| ||||||| || ||||| ||||||||||||||||| ||| ||||||| | |||| |
|
|
| T |
6946138 |
gaggctcttcaaccaaagagcaacttgaagaagctcaccatcacatactacaatggcagtagctttccaaattggctaagtggttttcatttatcaaact |
6946039 |
T |
|
| Q |
333 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
432 |
Q |
| |
|
||||||||||| || | |||| ||| |||||||| ||| |||| ||||| || |||| ||||||||| | |||| |||| ||||| | || |
|
|
| T |
6946038 |
tagtatctcttaaactgaaggactgtgtactatgttcccatttaccaatgcttgggcagttcccctctctcaaggagatttctatttcaaactgtaacgg |
6945939 |
T |
|
| Q |
433 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggag |
532 |
Q |
| |
|
|||||||||||| | ||||| ||||| ||||| | |||||| |||||| |||| |||||||||| ||||| ||| ||| |||||||||| |||||| |
|
|
| T |
6945938 |
aataaagatcatcggcgaagagttttacaacaatagtacaacaaatgttccgttcaggtcccttgaagttttgaaattggagcatatggtcaattgggag |
6945839 |
T |
|
| Q |
533 |
gaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcacct---tacctcaacatcttccttctt |
626 |
Q |
| |
|
|||||| | || || |||||||||| |||||||||||||| |||| ||||||||| ||||||||||| ||| | |||||||| |||||||||| |
|
|
| T |
6945838 |
gaatggttttgtcctgaaaggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctt |
6945739 |
T |
|
| Q |
627 |
tacaaaaattgaatattagtggttgcaaagagttggaggt |
666 |
Q |
| |
|
||||||||||| | || ||| ||| ||| |||||||||| |
|
|
| T |
6945738 |
tacaaaaattgcaactttgtgtttgtaaacagttggaggt |
6945699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 233 - 636
Target Start/End: Complemental strand, 8470427 - 8470021
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
332 |
Q |
| |
|
|||||||| ||||||||| ||||||||| | ||| |||| |||| |||||||||| || |||||||| ||| |||||||| |||||||||| |||| |
|
|
| T |
8470427 |
gaggctcttcaaccaaataacaacttgaataggctttacatctcacaatacaaaggtaaaagctttccaaagtggataaggggttgtcatttaccaaact |
8470328 |
T |
|
| Q |
333 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
432 |
Q |
| |
|
||||||||||| |||| || | ||| | |||| | ||||||| |||||||||| ||||| | ||||||| | ||| | || | ||||||| | || |
|
|
| T |
8470327 |
tagtatctcttaaattacagagctgtggatcatgtctccatttgccaccacttggacagctcccgtgtctcaaggagcttgctatctgtgactgtcatgg |
8470228 |
T |
|
| Q |
433 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggag |
532 |
Q |
| |
|
||||||||| |||| |||||| ||| ||||||| |||||||||| |||||| ||| |||||||||| ||||| ||||| | | ||| || |||||| |
|
|
| T |
8470227 |
aataaagataattggtgaagagtttcatggcaacaattcaacaaatgttccgttcttgtcccttgaagttttgaaatttgtgaagatgaacagttgggag |
8470128 |
T |
|
| Q |
533 |
gaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttac |
629 |
Q |
| |
|
|||||| | || || | |||||||| ||||||||||||||| |||| ||| ||||| |||||| |||| | || |||||||| ||||||||||||| |
|
|
| T |
8470127 |
gaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttctttac |
8470028 |
T |
|
| Q |
630 |
aaaaatt |
636 |
Q |
| |
|
||||||| |
|
|
| T |
8470027 |
aaaaatt |
8470021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 6840067 - 6840177
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
332 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| ||||||||||| | |||||||| |||||| |
|
|
| T |
6840067 |
gaggctcttcaaccaaatagcaacttggagaagctcaacataaaacactacaaaggtaatagctttccaagttggctaagggcttgtcatttatccaact |
6840166 |
T |
|
| Q |
333 |
tagtatctctt |
343 |
Q |
| |
|
||||||||||| |
|
|
| T |
6840167 |
tagtatctctt |
6840177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 6946390 - 6946248
Alignment:
| Q |
2 |
ctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaattc |
101 |
Q |
| |
|
||||| ||||||||| |||| | |||||||||||||||| || ||||| |||||||| || || |||| ||||| ||||||||||||||||||||| |
|
|
| T |
6946390 |
ctaaacaatcttcaggccttaccttattttattgtggaagagcagaatgagtctgatcttaaggagttggggaaactaaaccatcttcatggaacaattg |
6946291 |
T |
|
| Q |
102 |
atattaaagggttgggtaatgtcagtgatactgcagatgctgc |
144 |
Q |
| |
|
|||||||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
6946290 |
atattaaagggttgggtaatgtgattgatcctgcagatgctgc |
6946248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 637
Target Start/End: Original strand, 6481145 - 6481555
Alignment:
| Q |
230 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
329 |
Q |
| |
|
||||||||||| |||||||||| | ||| |||| ||| | ||| |||| || | ||||| |||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
6481145 |
ttggaggctcttcaaccaaatagaagcttaaagaggcttagcatctcacaatatagaggtaatagatttccaaattggataaggggttgtcatttaccca |
6481244 |
T |
|
| Q |
330 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
429 |
Q |
| |
|
|||||||||||||| || | ||| |||||||| ||||||| ||||||| |||||||| ||||||| | | ||||| |||| ||||| | |
|
|
| T |
6481245 |
acttagtatctcttcaaatgcgtcactgtggattatgttctcatttgccaccacttgggcaactcccctctctcagggagctttctatttcaaactgtaa |
6481344 |
T |
|
| Q |
430 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
529 |
Q |
| |
|
| ||||||||||||| | |||||| || ||||| |||||||||| ||||| | |||||| ||| |||||| |||| |||| || |||| || | | |
|
|
| T |
6481345 |
aagaataaagatcatcggtgaagagttatatggaaataattcaaaaattgatgcattcaggtctcttgaagttttggaatttcagcggatggaaaatttg |
6481444 |
T |
|
| Q |
530 |
gaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctt |
626 |
Q |
| |
|
||||||||| |||| || | |||||| ||||||||||||| |||| || ||||||| ||||||||||| || | |||||||| |||||||||| |
|
|
| T |
6481445 |
gaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttccttctt |
6481544 |
T |
|
| Q |
627 |
tacaaaaattg |
637 |
Q |
| |
|
|||| |||||| |
|
|
| T |
6481545 |
tacagaaattg |
6481555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 230 - 665
Target Start/End: Original strand, 6729885 - 6730323
Alignment:
| Q |
230 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
329 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| || | || ||| |||||||||| ||| |||||||||||||| |||||| |||||||||||| |
|
|
| T |
6729885 |
ttggaggctctacaaccaaatagaaacttgaagtgacttacaatctcacgatacaaaggtaatagctttccaaattggctgaggggttgtcatttaccca |
6729984 |
T |
|
| Q |
330 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
429 |
Q |
| |
|
||||||||||||||||| | | | ||| | | |||||| ||||| ||||||| || ||||| | ||| || | || |||| || ||| | |
|
|
| T |
6729985 |
acttagtatctcttgaactgcggagctgtgaaatttgttccctgttgccgccacttgggcagctcccatttcttaaagagctccgtatttcagattgtaa |
6730084 |
T |
|
| Q |
430 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
529 |
Q |
| |
|
| |||||||||||| | |||| || ||||| |||||||||| |||||||||||||| ||| |||||| |||| ||||||| | ||| || ||| |
|
|
| T |
6730085 |
tgtaataaagatcatcggcaaagagttctatggaaataattcaataattgttccattcaggtctcttgaagtattgaaatttgagcaattggagaattgg |
6730184 |
T |
|
| Q |
530 |
gaggaatggatatgtgt--aag-gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctt |
626 |
Q |
| |
|
||||||||| ||| | | ||| ||||||||| |||||||||||| | ||| ||||||||| ||| ||||||| || | |||||||| |||||||||| |
|
|
| T |
6730185 |
gaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctt |
6730284 |
T |
|
| Q |
627 |
tacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
|| |||||||||| ||| | |||||||||||||||||| |
|
|
| T |
6730285 |
tagaaaaattgaagattgtttgttgcaaagagttggagg |
6730323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 362 - 637
Target Start/End: Original strand, 6795906 - 6796184
Alignment:
| Q |
362 |
ttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccattt-atgactgtgaaggaataaagatcattgatgaagatttttat |
460 |
Q |
| |
|
||||||||| ||||||| |||| || || ||||| ||||||||| | |||||||||| | || ||||| ||||||| |||||||| |||||| ||||| |
|
|
| T |
6795906 |
ttatgttccgatttgccagcactagggcagctcccctctctcaaggacctttccatttcaaga-tgtgacggaataatgatcattggtgaagaattttac |
6796004 |
T |
|
| Q |
461 |
ggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctc |
557 |
Q |
| |
|
||||| |||||||| |||| | |||| ||||||||| ||||| ||||||||| |||| ||| |||||||||||| | || || | |||||||| |
|
|
| T |
6796005 |
aacaatagttcaacaaatgtttcgttcaggtcccttgaggttttgaaatttgaggagatggacaattgggaggaatggttttgtcttgaagggtttcctt |
6796104 |
T |
|
| Q |
558 |
tgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattg |
637 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||||||||| | |||||| | ||||||||||||||||||||| |
|
|
| T |
6796105 |
tgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttctttacaaaaattg |
6796184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 665
Target Start/End: Original strand, 6450008 - 6450395
Alignment:
| Q |
281 |
tacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaa |
380 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| | | | ||| | | |||||| ||||| |
|
|
| T |
6450008 |
tacaaaggtaatagctttccaaattggctgaggggttgtcatttacccaacttagtatctcttgaactgcggagctgtgaaatttgttccctgttgccgc |
6450107 |
T |
|
| Q |
381 |
cacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgt |
480 |
Q |
| |
|
||||||| || ||||| | ||| || | || |||| || ||| | |||||||||||||| | |||| || ||||| |||||||||| |||||| |
|
|
| T |
6450108 |
cacttgggcagctcccatttcttaaagagctccgtatttcagattgtaatggaataaagatcatcggcaaagagttctatggaaataattcaataattgt |
6450207 |
T |
|
| Q |
481 |
tccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgt--aag-gtttcctctgcttaaagagctttatata |
577 |
Q |
| |
|
|||||||| || |||||| |||| ||||||| | ||| || |||||||||||| ||| | | ||| ||||||||| |||||||||||| | ||| |
|
|
| T |
6450208 |
tccattcagatctcttgaagtattgaaatttgagcagttggagaattgggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaata |
6450307 |
T |
|
| Q |
578 |
gaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
||||||||| ||| ||||||| || | |||||||| |||||||||||| |||||||||| ||| | ||||||| |||||||||| |
|
|
| T |
6450308 |
agaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgttgcaatgagttggagg |
6450395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 8570114 - 8570227
Alignment:
| Q |
230 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
329 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| ||||| ||| ||| ||||||| || ||||| |||||||||||| ||| |||| || |||||||| |
|
|
| T |
8570114 |
ttggatgctcttcaaccaaatagcaacttgaagaggctcaccatcacatactacaatggcagtagctttccaaattggttaatgggttttcttttaccca |
8570213 |
T |
|
| Q |
330 |
acttagtatctctt |
343 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8570214 |
acttagtatctctt |
8570227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 321 - 665
Target Start/End: Original strand, 6592600 - 6592947
Alignment:
| Q |
321 |
atttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccattta |
420 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||| ||||| || |||| |||||| ||||||| || |||| ||||||||||| |||||| ||| |
|
|
| T |
6592600 |
atttacccaagttagtatcccttgaattgttgggatgtaaattccattccgaattgccaccacttgggcagttcccctctctcaagaagctttccttttc |
6592699 |
T |
|
| Q |
421 |
tgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatg |
520 |
Q |
| |
|
| |||||| |||||| ||||||||| | ||| ||||| ||| |||||||| ||| ||||||||| | | ||||||| ||| |||||||| | ||| |
|
|
| T |
6592700 |
aggctgtgatggaatagagatcattggtacagaattttacggctataattcatcaaatgttccatttagattccttgaaacattgcgatttgagaacatg |
6592799 |
T |
|
| Q |
521 |
gtcaactgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatc |
617 |
Q |
| |
|
| ||| |||||||| ||||| | ||||||||| | ||||| ||||||||| |||| || ||||||| || |||||||| || | |||||||| | |
|
|
| T |
6592800 |
tctgaatggaaggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacacc |
6592899 |
T |
|
| Q |
618 |
ttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
|||||||||| ||||||||| | |||| || |||| |||||||||||| |
|
|
| T |
6592900 |
ttccttctttgcaaaaattggagattactgattgccaagagttggagg |
6592947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 233 - 499
Target Start/End: Complemental strand, 7586738 - 7586472
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
332 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||| | ||| ||||||||||||||| ||| ||| |||||||| | |||||| || |||||||||||| |
|
|
| T |
7586738 |
gaggctcttcaaccaaatagcagcttgaagaggcttatcatctcacactacaaaggtaataggtttgcaaattggatgaggggttgtgatttacccaact |
7586639 |
T |
|
| Q |
333 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
432 |
Q |
| |
|
|||| || || | | || ||| ||||||||| |||||| |||||||||||||||||| |||||| | |||| |||| | |||||| |
|
|
| T |
7586638 |
tagtttcaattagactaaatctctgtgctttatgttccgagttgccaccacttggacaactcccttgtctcaaagagatttcaatttcaggctgtgataa |
7586539 |
T |
|
| Q |
433 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaa |
499 |
Q |
| |
|
||||| |||||| | |||| ||||||||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
7586538 |
aataaggatcatagggaaagaattttatggcaataattccacaaatgttccattcagatcccttgaa |
7586472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 499
Target Start/End: Original strand, 13271758 - 13271978
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | |||| ||||||| ||||||||||||||||| ||| ||||| | |||||| ||||| |
|
|
| T |
13271758 |
actacagaggtagtagctttccaaattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaactctgttcccagttgcc |
13271857 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
478 |
Q |
| |
|
| ||||||| || | ||||||||| |||| |||||||||| || |||| | |||||| ||||||||| | ||| |||| ||| ||||| || ||| | |
|
|
| T |
13271858 |
accacttgggcagttgccttctctcgagaagctttccatttctggctgtcatggaatagagatcattggttcagagttttgcggctataatccatcaaat |
13271957 |
T |
|
| Q |
479 |
gttccattcaagtcccttgaa |
499 |
Q |
| |
|
|||||||| | ||||||||| |
|
|
| T |
13271958 |
gttccatttagatcccttgaa |
13271978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 662
Target Start/End: Complemental strand, 6915885 - 6915539
Alignment:
| Q |
319 |
tcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatt |
418 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||| ||||| | ||||| ||||| ||||||| || |||| ||||||||||| |||| ||| |
|
|
| T |
6915885 |
tcatttaccaaatttagtatctcttgaattgttgggatgtaaactccgttcccagttgccgccacttgggcagttcccctctctcaagaagctttttatt |
6915786 |
T |
|
| Q |
419 |
tatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggata |
518 |
Q |
| |
|
| | |||||| |||||| | ||||||| | ||| || |||||| | |||||| ||| |||| |||| || ||||||||| |||| |||||||| | | |
|
|
| T |
6915785 |
tcaggctgtgatggaatagaaatcattggtacagagttctatggctacaattcatcaaatgtttcatttaaatcccttgaaactttgcgatttgagcaca |
6915686 |
T |
|
| Q |
519 |
tggtcaactgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaaca |
615 |
Q |
| |
|
|| | | ||| |||||||| ||||| | || |||||| | ||||| ||||||||| |||| || ||||||| || |||||||| || | |||||||| |
|
|
| T |
6915685 |
tgtccgaatggaaggaatggttatgtcttgaatgtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaaca |
6915586 |
T |
|
| Q |
616 |
tcttccttctttacaaaaattgaatattagtggttgcaaagagttgg |
662 |
Q |
| |
|
||||||||||| ||||||||| | |||| || |||| ||||||||| |
|
|
| T |
6915585 |
ccttccttctttgcaaaaattggagattattgattgccaagagttgg |
6915539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 422 - 636
Target Start/End: Complemental strand, 8588490 - 8588273
Alignment:
| Q |
422 |
gactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatgg |
521 |
Q |
| |
|
|||||| ||| |||||||||||||| || || ||||| || ||||| ||||||||||||||||||| ||| |||||| |||| |||| | |||| |
|
|
| T |
8588490 |
gactgtaaagaaataaagatcattggtgccgacttttacggaaataactcaacaattgttccattcaggtctcttgaagttttggaatttaaacggatgg |
8588391 |
T |
|
| Q |
522 |
tcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatct |
618 |
Q |
| |
|
||| ||||||||||||||||| | | |||||||| |||||||| |||| | |||| | |||||| |||||||||| | || |||||||| || |
|
|
| T |
8588390 |
acaattgggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacacct |
8588291 |
T |
|
| Q |
619 |
tccttctttacaaaaatt |
636 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8588290 |
tccttctttacaaaaatt |
8588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 665
Target Start/End: Complemental strand, 6258026 - 6257637
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | | || |||| || ||||||||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
6258026 |
actacagaggtagtagctttccaaattggcttggggatcttaatctaccaaatttagtatctcttgaattagtgggatgtaaacattgttcccagttgcc |
6257927 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
478 |
Q |
| |
|
| ||||||| | |||||||||||||||| |||||||||| | |||| | |||||||||||||||| | ||| |||| ||| |||||||| ||| | |
|
|
| T |
6257926 |
accacttgggaagttcccttctctcaagaagctttccatttcaggctgtcatggaataaagatcattggttcagagttttgcggctataattcatcaaat |
6257827 |
T |
|
| Q |
479 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg--tgtaaggttt-cctctgcttaaagagctttata |
575 |
Q |
| |
|
||| |||| | ||||||||| |||| | ||||| ||||| | ||| |||||||| |||| | ||||||| ||||||||| ||||||||| | |
|
|
| T |
6257826 |
gttgcatttagatcccttgaaactttgcgggttgagtatatgtctgaatggaaggaatggttatgccttgaaggtttccctctgcttcaagagctttgtc |
6257727 |
T |
|
| Q |
576 |
tagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
|| || | ||||| || |||||||| || | ||||| |||||||||| ||| ||||| ||| | |||| || |||| |||||||||||| |
|
|
| T |
6257726 |
taaaacaatgtcccaagttgaaaagtgccctgcctcatcatcttccttgtttgcaaaagttggagattattgattgcgaagagttggagg |
6257637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 665
Target Start/End: Complemental strand, 5297237 - 5297180
Alignment:
| Q |
608 |
cctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
5297237 |
cctcaacatcttccttctttgcaaaaattgaagattagtgattgccaagagttggagg |
5297180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 6486191 - 6486270
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaag |
312 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||| | | ||||||| ||||||||| |
|
|
| T |
6486191 |
gaggctcttcaatcaaatagcaacttgaagaagctcaacatcaaacgctacaaaggtaatcgttttccaagttggctaag |
6486270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 661
Target Start/End: Complemental strand, 6898912 - 6898527
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| ||| | |||||||||||| ||||||||||| ||||| ||| ||||| | ||||| ||||| |
|
|
| T |
6898912 |
actacagaggcagtagatttccaaattggcttggggttcatcatttacccaatttagtatctctagaattgttgggatgtaaacttcgttcccagttgcc |
6898813 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
478 |
Q |
| |
|
||||||| || | || ||||||||||| |||||||||| | |||||| |||||| | ||||||| | ||| ||| |||| | |||||| ||| | |
|
|
| T |
6898812 |
cccacttgggcagttaccctctctcaagaagctttccatttcaggctgtgatggaatagatatcattggtacagagatttgtggctacaattcatcaaat |
6898713 |
T |
|
| Q |
479 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttata |
575 |
Q |
| |
|
| |||||| | ||||||||| |||| |||||||| | ||| | ||| |||||||| |||| || | | |||| | ||||| ||||||||| || |
|
|
| T |
6898712 |
gatccatttagatcccttgaaactttgcgatttgagcacatgtctgaatggaaggaatggttatgtcttgaatgttttcatttgcttcaagagctttgta |
6898613 |
T |
|
| Q |
576 |
tagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttg |
661 |
Q |
| |
|
| || ||||||| || |||||||| || | |||||||| ||||||||||| ||||| ||||| |||| || |||| |||||||| |
|
|
| T |
6898612 |
tcaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaagttgaaaattattgattgccaagagttg |
6898527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 6932419 - 6932336
Alignment:
| Q |
233 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggt |
316 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||| | | ||||||| |||||||| |||| |
|
|
| T |
6932419 |
gaggctcttcaatcaaatagcaacttgaagaagctcaacatcaaacgctacaaaggtaatcgttttccaagttggctaaagggt |
6932336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 279 - 417
Target Start/End: Complemental strand, 6236549 - 6236411
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||| ||| | |||| ||||||| ||||||||||||||||| ||| ||||| | |||||| ||||| |
|
|
| T |
6236549 |
actacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgcc |
6236450 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccat |
417 |
Q |
| |
|
| ||||||| || |||||||||||||||| |||||||| |
|
|
| T |
6236449 |
accacttgggcagttcccttctctcaagaagctttccat |
6236411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 446
Target Start/End: Complemental strand, 6141159 - 6140943
Alignment:
| Q |
230 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
329 |
Q |
| |
|
||||||||||| |||||||||| ||| | | || ||||| ||| | |||||| ||||||||| ||||| |||||||| ||| | |||| |||||| |
|
|
| T |
6141159 |
ttggaggctcttcaaccaaatagaaacctcatgaggctcaccatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctaccca |
6141060 |
T |
|
| Q |
330 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
429 |
Q |
| |
|
| ||||||||||||||||| ||| |||| |||||| |||||| ||||||| || |||||||||||||||| |||||||||| | |||| | |
|
|
| T |
6141059 |
atttagtatctcttgaattgttgggatgtacacactgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatttcaggctgtca |
6140960 |
T |
|
| Q |
430 |
aggaataaagatcattg |
446 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
6140959 |
tggaatagagatcattg |
6140943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 646
Target Start/End: Original strand, 6522968 - 6523064
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagt |
646 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
6522968 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagt |
6523064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 8588778 - 8588694
Alignment:
| Q |
80 |
aaccatcttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata |
164 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||| ||||||||||| | |||| |||||||||||| ||| ||||||||||||| |
|
|
| T |
8588778 |
aaccatcttcatgggaaaattcatataaaaggtttgggtaatgtaattgatcctgcagatgctgtgacagccaatttgaaagata |
8588694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 513
Target Start/End: Original strand, 6486290 - 6486441
Alignment:
| Q |
362 |
ttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatg |
461 |
Q |
| |
|
|||||||| |||||||| |||| | ||||| || |||||| |||||||| ||| ||||| ||| | |||||||||||| |||||| ||||| | |
|
|
| T |
6486290 |
ttatgttctcgtttgccacgactttggcaactgccctctctctagaaacttcatgtttgtgactctgatgaaataaagatcatcagtgaagaattttacg |
6486389 |
T |
|
| Q |
462 |
gcaataattcaacaattgttccattcaagtcccttgaatatttgagatttga |
513 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||||||| ||||| |||||| |
|
|
| T |
6486390 |
acaataattcaacaatttttccatttaggtcccttgaagttttgatatttga |
6486441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 512
Target Start/End: Original strand, 6850598 - 6850717
Alignment:
| Q |
393 |
tcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtc |
492 |
Q |
| |
|
|||| ||||||||||| |||||||||| | |||||| |||||| ||||||||| | ||| ||||| ||| | |||||| ||| ||||||||| || || |
|
|
| T |
6850598 |
tcccctctctcaagaatctttccatttcaggctgtgatggaatagagatcattggtccagagttttacggctacaattcatcaaatgttccatttaaatc |
6850697 |
T |
|
| Q |
493 |
ccttgaatatttgagatttg |
512 |
Q |
| |
|
||||||| |||| |||||| |
|
|
| T |
6850698 |
ccttgaaactttgcgatttg |
6850717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 279 - 661
Target Start/End: Complemental strand, 7748826 - 7748441
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
378 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||| | | | |||||||||||| ||||| |||||||||| ||| ||||| | |||||| || || |
|
|
| T |
7748826 |
actacagaggcagtagctttccaaattggcttggcgattatcatttacccaatttagttactcttgaattgttgggatgtaaactttgttcccagttacc |
7748727 |
T |
|
| Q |
379 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
478 |
Q |
| |
|
| ||||||| || ||| ||||||||||| |||||||||| | ||| || |||||| |||| |||| || ||| ||| |||| |||||||| ||| | |
|
|
| T |
7748726 |
atcacttgggcagttccactctctcaagaagctttccatttcaggctgcgatggaatagagattattggtgcagagatttgtggctataattcatcaaat |
7748627 |
T |
|
| Q |
479 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtca-actgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttat |
574 |
Q |
| |
|
||| |||| | || |||||| |||| |||||||| | ||| ||| | ||| |||||||| ||||| | || |||||| | ||||| |||||||| | |
|
|
| T |
7748626 |
gtttcatttagatctcttgaaactttgcgatttgagcacatg-tcagaatggaaggaatggttatgtcttgaatgtttccctttgcttcgagagctttgt |
7748528 |
T |
|
| Q |
575 |
atagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttg |
661 |
Q |
| |
|
||| || ||||||| || |||||||| || | |||||||| ||||||||||| ||||||||| | |||| || |||| |||||||| |
|
|
| T |
7748527 |
ataaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagattattgattgccaagagttg |
7748441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 596
Target Start/End: Original strand, 4390321 - 4390442
Alignment:
| Q |
478 |
tgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgt--aaggttt-cctctgcttaaagagctttat |
574 |
Q |
| |
|
||||||||||| || ||||||| |||| |||||||||| ||| ||| ||| |||||||| ||||||| ||||||| ||| ||||||||||||||| | |
|
|
| T |
4390321 |
tgttccattcaggttccttgaaattttgcgatttgaggacatgtccaattggaaggaatggttatgtgttgaaggtttccctttgcttaaagagctttct |
4390420 |
T |
|
| Q |
575 |
atagaaaattgtcctaaattga |
596 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
4390421 |
atacgtaattgtccaaaattga |
4390442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 6480920 - 6480994
Alignment:
| Q |
26 |
tattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||| ||||||||| | |||| ||||||||||||||| |||| |||||| |||||||||||||||| |||| |
|
|
| T |
6480920 |
tattttgttgtggaagagaaaaatggatctgatctcaaagagttggaaaaactaaaccatcttcatggaaaaatt |
6480994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 665
Target Start/End: Original strand, 6840653 - 6840769
Alignment:
| Q |
552 |
ttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcacctt---acctcaacatcttccttctttacaaaaattgaatattagtgg |
648 |
Q |
| |
|
||||| ||||||||||| ||| |||| |||||| || ||||| ||||| |||| ||||||||| |||||||||||||||||| |||| ||| ||| |
|
|
| T |
6840653 |
ttcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactgaagatttgtga |
6840752 |
T |
|
| Q |
649 |
ttgcaaagagttggagg |
665 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
6840753 |
ttgcaacaagttggagg |
6840769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 6167715 - 6167646
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatt |
348 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | |||| ||||||| ||||||||||||||||| |
|
|
| T |
6167715 |
actacagaggtagtagctttccaaattggcttggggatcatcatctacccaatttagtatctcttgaatt |
6167646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 7586419 - 7586338
Alignment:
| Q |
549 |
ggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttaca |
630 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||| ||||| || |||||||| | | |||||||| |||||||||||||| |
|
|
| T |
7586419 |
ggtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttaca |
7586338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6521888 - 6521972
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6521888 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6521972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6522293 - 6522377
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6522293 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6522377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6522563 - 6522647
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6522563 |
gtttcctttgcttaaagagatttctataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6522647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6522833 - 6522917
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6522833 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6522917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 599
Target Start/End: Original strand, 6840217 - 6840427
Alignment:
| Q |
392 |
ctcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagt |
491 |
Q |
| |
|
||||| ||||||| || ||||| ||| ||||||||| | |||||||||||| ||| |||| ||||| | ||| |||| |||||||||||||| | || |
|
|
| T |
6840217 |
ctcccctctctcagaaagctttctgtttgtgactgtgatgaaataaagatcatcgatcaagagttttacgacaacgattcgacaattgttccatttaggt |
6840316 |
T |
|
| Q |
492 |
cccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcc |
588 |
Q |
| |
|
| |||||| ||||| ||||||| | ||| ||| |||||| ||||| | || || | |||||||| |||||||| || ||| |||| ||| ||||| |
|
|
| T |
6840317 |
cgcttgaagttttgaaatttgagaagatgaacaattgggagaaatggttttgtcttgaagggtttcctttgcttaaaaagatttctataagaaaatgtcc |
6840416 |
T |
|
| Q |
589 |
taaattgaaaa |
599 |
Q |
| |
|
|||||||||| |
|
|
| T |
6840417 |
caaattgaaaa |
6840427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6841059 - 6841143
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6841059 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6841143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 665
Target Start/End: Original strand, 6723323 - 6723673
Alignment:
| Q |
318 |
gtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccat |
417 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||| ||||| || |||||| || ||| ||||||| || |||| | |||| |||| |||||||| |
|
|
| T |
6723323 |
gtcatttacccaatttagtatctcttgaattgttgggatgtaaattctgttcccagttaccaccacttgggcagttcccctttctcgagaagctttccat |
6723422 |
T |
|
| Q |
418 |
ttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggat |
517 |
Q |
| |
|
|| | |||||| |||||| ||| ||||| ||| |||| ||| ||||| | ||| ||||||||| | ||||||| | |||| |||||||| | |
|
|
| T |
6723423 |
ttcaggctgtgatggaatagagaccattggaacagagttttgcggctataatgcttcaagtgttccatttagatcccttgtaactttgcgatttgagcaa |
6723522 |
T |
|
| Q |
518 |
atggtcaactgggaggaatggatatgtgt--aaggttt-cctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaac |
614 |
Q |
| |
|
||| | ||| |||||||| ||||| | ||||||| ||| |||| ||||||||| |||| || ||||||| || |||||||| || | ||||||| |
|
|
| T |
6723523 |
atgtctgaatggaaggaatggttatgtcttgaaggtttccctttgctacaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaac |
6723622 |
T |
|
| Q |
615 |
atcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
| |||||||| || ||||||||| | |||| || |||| ||||| |||||| |
|
|
| T |
6723623 |
accttccttcattgcaaaaattggagattattgattgccaagagctggagg |
6723673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 633
Target Start/End: Original strand, 6840924 - 6841007
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaa |
633 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| ||||||||||||||||| |
|
|
| T |
6840924 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
6841007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 665
Target Start/End: Complemental strand, 6236265 - 6236160
Alignment:
| Q |
560 |
cttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagt |
659 |
Q |
| |
|
||||||||||||| |||| || ||||||| || |||||||| | | |||||| | ||||||| ||| ||||||||| | |||| || |||| |||||| |
|
|
| T |
6236265 |
cttaaagagctttgtataaaacattgtcccaagttgaaaagtgacctgcctcaataccttccttgtttgcaaaaattggagattattgattgccaagagt |
6236166 |
T |
|
| Q |
660 |
tggagg |
665 |
Q |
| |
|
|||||| |
|
|
| T |
6236165 |
tggagg |
6236160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6522023 - 6522107
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | | |||||| |||||||||||||||||| |
|
|
| T |
6522023 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaa |
6522107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6528499 - 6528583
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| |||| || |||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6528499 |
gtttcctttgcttaaagagatttctataacaagttgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6528583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6556065 - 6556149
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| ||| ||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |
|
|
| T |
6556065 |
gtttcctttgcttaaagagtttttaataagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttctttacaaaaa |
6556149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 6840516 - 6840600
Alignment:
| Q |
550 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaa |
634 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||| ||||||||||| | | || ||||| |||||||||||||||||| |
|
|
| T |
6840516 |
gtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgccacaacaccttccttctttacaaaaa |
6840600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 450 - 665
Target Start/End: Original strand, 8570334 - 8570552
Alignment:
| Q |
450 |
aagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgt--- |
546 |
Q |
| |
|
|||| ||||| ||||||| |||||||||| |||| |||| |||||||||| |||| ||||| ||| ||| |||||||||||| | ||| | |
|
|
| T |
8570334 |
aagagttttacggcaatagttcaacaattattccgttcaggtcccttgaagttttggaatttgcatggatgaacaattgggaggaatggttttgtattga |
8570433 |
T |
|
| Q |
547 |
aaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagt |
646 |
Q |
| |
|
| |||||||| |||||||| |||||| |||| | |||||| | ||||||||| || | |||| ||| |||||||||||||||||| || | || ||| |
|
|
| T |
8570434 |
agggtttcctttgcttaaaaagctttctataagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagt |
8570533 |
T |
|
| Q |
647 |
ggttgcaaagagttggagg |
665 |
Q |
| |
|
| |||||| ||||||||| |
|
|
| T |
8570534 |
gattgcaagaagttggagg |
8570552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 506; Significance: 0; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 1 - 665
Target Start/End: Original strand, 8420 - 9093
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8420 |
gctaaataatcttcagaccatgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
8519 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattacatactgagttcaatg |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| || | |||||||||| |
|
|
| T |
8520 |
catattaaagggttgggtaatgtcagtgatcctgcagatgctgccacatcaaatttgaaagataagaagtatttagaagaatttcaaatggagttcaatg |
8619 |
T |
|
| Q |
192 |
gcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtag |
291 |
Q |
| |
|
||||| |||||||||||| |||||| | ||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
8620 |
gcggaagagaagaaatggatgaaagaagtgtgttagtcttggaggctttacaaccaaatagcaacttgaagaagctcaacatcacatgctacaaaggtag |
8719 |
T |
|
| Q |
292 |
tagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaa |
391 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
8720 |
tagctttccaaattggctaaggggtagtcatttaccgaacttagtatctcttcaactgaagggttgtgggttatgttcctgtttgccagcacttggacaa |
8819 |
T |
|
| Q |
392 |
ctcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagt |
491 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8820 |
ctcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagaattttatggcaataattcaacaattgttccattcaagt |
8919 |
T |
|
| Q |
492 |
cccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaa |
591 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8920 |
cccttgaatatttgagatttgtggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaa |
9019 |
T |
|
| Q |
592 |
attgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
665 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
9020 |
attgaaaagcaccctgcctcaacatcttccttctttacaaaaattgattatttatggttgcaaagagttggagg |
9093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2623685 - 2623847
Alignment:
| Q |
1 |
gctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatggaacaatt |
100 |
Q |
| |
|
|||||| |||||||| | | ||| ||||||||||| ||||| ||||||| ||||||||| ||||| |||||||||| |||||| |||||||||||||| |
|
|
| T |
2623685 |
gctaaacaatcttcaaagcatgttatattttattggggaagagcataatggatctgatcttaaagagttggcaaaacaaaaccat-ttcatggaacaatt |
2623783 |
T |
|
| Q |
101 |
catattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata |
164 |
Q |
| |
|
|||||| |||| |||| ||||||||| ||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
2623784 |
catattgaaggcttggataatgtcagcgatcttgcagatgctgctacagtaaatttgaaagata |
2623847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 230 - 654
Target Start/End: Complemental strand, 1043 - 613
Alignment:
| Q |
230 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
329 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||| ||||| ||| | |||||| || || | |||||||||||| ||| ||| |||||||||||| |
|
|
| T |
1043 |
ttggatgctcttcaaccaaataacaacttgaagaggctcactattgaaggctacaatggcagcaactttccaaattggataacaggttgtcatttaccca |
944 |
T |
|
| Q |
330 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
429 |
Q |
| |
|
|||||||||||||| || | | ||| ||||||||| ||| ||| ||||||| || || |||||||||||||| ||||| |||| | ||||| |
|
|
| T |
943 |
acttagtatctcttcaactgttaagctgtggattatgttcccattttccaccacttgggcagcttccttctctcaagaatctttctatttcatattgtga |
844 |
T |
|
| Q |
430 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
529 |
Q |
| |
|
|||||||||||||||| |||||| || |||||| |||| ||| |||||| ||| |||||||||| ||||| ||||||| | || ||| ||| |
|
|
| T |
843 |
tggaataaagatcattggtgaagagattcatggcagcaatttaacgcatgttccgttcttgtcccttgaagttttgaaatttgagaagttgaacaattgg |
744 |
T |
|
| Q |
530 |
gaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag---caccttacctcaacatcttcctt |
623 |
Q |
| |
|
||||||||| | || || | |||||||| |||||||||||||| |||| ||| ||||| ||||| |||| ||| | |||||||| ||||||| |
|
|
| T |
743 |
gaggaatggttgtgtcctgaagggtttcctttgcttaaagagcttactataagaaagtgtcccaaattagaaagggccactctgcctcaacaccttcctt |
644 |
T |
|
| Q |
624 |
ctttacaaaaattgaatattagtggttgcaa |
654 |
Q |
| |
|
|||||||||| ||||||||| || |||||| |
|
|
| T |
643 |
ttttacaaaaactgaatattactgattgcaa |
613 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 6574499 - 6574598
Alignment:
| Q |
244 |
accaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctctt |
343 |
Q |
| |
|
||||||||||||| | ||| ||||| ||| | | ||||||| || || || |||||||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
6574499 |
accaaatagcaacctacagaggctcaccatcaaatactacaatggcagcagctttccaaattggctaaggtgttctcatttacctaacttagtatctctt |
6574598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0958 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 645
Target Start/End: Original strand, 1274 - 1370
Alignment:
| Q |
549 |
ggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattag |
645 |
Q |
| |
|
|||||||| |||||||| | |||| |||| | |||||| | ||||||||| || |||||| ||| |||||||||||||||| |||| ||||||| |
|
|
| T |
1274 |
ggtttcctttgcttaaaaatctttctataagatattgtcgcatattgaaaagggccctacctcgacaccttccttctttacaaatattggatattag |
1370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 35141574 - 35141634
Alignment:
| Q |
279 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatc |
339 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | |||||||||||| |||||||| |
|
|
| T |
35141574 |
actacagaggtagtagctttccaaattggcttggggatcatcatttacccaatttagtatc |
35141634 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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