View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18638_low_5 (Length: 605)

Name: NF18638_low_5
Description: NF18638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18638_low_5
NF18638_low_5
[»] chr7 (15 HSPs)
chr7 (13-299)||(1827541-1827827)
chr7 (296-588)||(1828755-1829047)
chr7 (172-347)||(1811181-1811356)
chr7 (505-584)||(1841700-1841778)
chr7 (23-90)||(43358743-43358810)
chr7 (532-584)||(1821906-1821958)
chr7 (50-90)||(19062831-19062871)
chr7 (23-82)||(47437811-47437870)
chr7 (538-584)||(1866081-1866127)
chr7 (23-64)||(22711464-22711505)
chr7 (23-112)||(32676373-32676462)
chr7 (287-347)||(1850682-1850742)
chr7 (421-465)||(12391355-12391399)
chr7 (533-569)||(17982602-17982638)
chr7 (17-65)||(29286213-29286261)
[»] chr4 (8 HSPs)
chr4 (23-156)||(4505730-4505861)
chr4 (31-92)||(10214341-10214402)
chr4 (31-124)||(47044854-47044947)
chr4 (23-114)||(55109843-55109934)
chr4 (23-65)||(48458452-48458494)
chr4 (31-116)||(6484696-6484781)
chr4 (26-63)||(44342355-44342392)
chr4 (23-91)||(28477066-28477134)
[»] chr8 (4 HSPs)
chr8 (23-112)||(11420428-11420517)
chr8 (23-132)||(34151064-34151173)
chr8 (23-88)||(3501400-3501465)
chr8 (33-78)||(3541186-3541231)
[»] chr1 (8 HSPs)
chr1 (25-124)||(45064058-45064156)
chr1 (44-95)||(10428072-10428123)
chr1 (31-114)||(42734776-42734859)
chr1 (23-116)||(31239030-31239123)
chr1 (47-105)||(8723304-8723362)
chr1 (31-156)||(6732212-6732337)
chr1 (23-91)||(10427477-10427544)
chr1 (23-71)||(36564079-36564127)
[»] chr5 (9 HSPs)
chr5 (31-90)||(18282283-18282342)
chr5 (13-91)||(40483057-40483135)
chr5 (23-84)||(14001129-14001190)
chr5 (25-153)||(34303519-34303645)
chr5 (75-132)||(40693396-40693453)
chr5 (23-91)||(23085349-23085417)
chr5 (23-91)||(29686233-29686301)
chr5 (23-111)||(37516567-37516653)
chr5 (33-115)||(3945192-3945274)
[»] chr3 (9 HSPs)
chr3 (26-156)||(47410517-47410645)
chr3 (26-84)||(26410397-26410455)
chr3 (363-418)||(11174679-11174735)
chr3 (23-153)||(36643594-36643722)
chr3 (23-90)||(50585733-50585800)
chr3 (23-73)||(39199173-39199223)
chr3 (23-81)||(47410918-47410976)
chr3 (23-84)||(2594478-2594539)
chr3 (101-156)||(14352153-14352206)
[»] chr2 (7 HSPs)
chr2 (31-125)||(7301553-7301647)
chr2 (23-84)||(35468724-35468785)
chr2 (23-85)||(741328-741391)
chr2 (26-84)||(8904967-8905025)
chr2 (23-84)||(11694222-11694283)
chr2 (23-64)||(28416973-28417014)
chr2 (23-91)||(744915-744983)
[»] chr6 (3 HSPs)
chr6 (23-116)||(28176661-28176756)
chr6 (23-95)||(32279623-32279695)
chr6 (31-92)||(17294011-17294072)
[»] scaffold0047 (1 HSPs)
scaffold0047 (23-84)||(65522-65583)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 13 - 299
Target Start/End: Original strand, 1827541 - 1827827
Alignment:
Q  13 aatataacgaataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1827541 aatataacgaataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaa 1827640  T
Q  113 gtcaatcaaaaacaatgtatcttctctttatatatagtatagatgaagtgatcaaatcatattctatttgttgcatgcgtaaggaataattaatgtacta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  1827641 gtcaatcaaaaacaatgtatcttctctttatatatagtatagatgaagtgatcaaatcatattctatttgttgcatgtgtaaggaataattaatatacta 1827740  T
Q  213 aaacttaacaattcttttatttcaactttagctatgttgaatctgtgatgttttcaatatactataccaatttgaaaaaagagttag 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1827741 aaacttaacaattcttttatttcaactttagctatgttgaatctgtgatgttttcaatatactataccaatttgaaaaaagagttag 1827827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 296 - 588
Target Start/End: Original strand, 1828755 - 1829047
Alignment:
Q  296 ttagataaaaactaatcttcaacttaactattgaagtgattcttttaggtggnnnnnnngtttaaatcaaaaaggagagcagcaaagaactgctacctca 395  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||    
T  1828755 ttagataaaaactaatcttcaacttaactattaaagtgattcttttaggtggtttttttgtttaaaccaaaaaggagagcagcaaagaactgctacctca 1828854  T
Q  396 aaagcttagatacatggagaaggggtgataccgtcaaatttacgagataaaaataccctataaataaaacaannnnnnncttatttcattttcatcatag 495  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  1828855 aaagcttagatacatggagaaggggtgatactgtcaaatttacgagataaaaataccctataaataaaacaatttttttcttatttcattttcatcatag 1828954  T
Q  496 agtgcataatcataacttcgaggtccattaaatttgaaaaagaaatacaattatttggtgcatgcacaaaaacttaatggcagctcctctaat 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1828955 agtgcataatcataacttcgaggtccattaaatttgaaaaagaaatacaattatttggtgcatgcacaaaaacttaatggcagctcctctaat 1829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 347
Target Start/End: Original strand, 1811181 - 1811356
Alignment:
Q  172 tattctatttgttgcatgcgtaaggaataattaatgtactaaaactt-aacaattcttttatttcaactttagctatgttgaatctgtgatgttttcaat 270  Q
    |||| |||||||||||||| |||||| ||| | ||  || |||| || || ||||  ||||||||||||||| | ||||||||| | |||||||||||||    
T  1811181 tattatatttgttgcatgcttaaggattaaatcatacacgaaaagttgaaaaattagtttatttcaactttaacgatgttgaatttatgatgttttcaat 1811280  T
Q  271 atactataccaatttgaaaaaagagttagataaaaactaatcttcaacttaactattgaagtgattcttttaggtgg 347  Q
    ||||||||||| |||| ||||||||| ||||||||| |||| |||||||||||| || || ||||||||||||||||    
T  1811281 atactataccagtttg-aaaaagagtaagataaaaattaattttcaacttaactgttaaaatgattcttttaggtgg 1811356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 505 - 584
Target Start/End: Complemental strand, 1841778 - 1841700
Alignment:
Q  505 tcataacttcgaggtccattaaatttgaaaaagaaatacaattatttggtgcatgcacaaaaacttaatggcagctcctc 584  Q
    |||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||| || ||||||    
T  1841778 tcataacttcaaggtccatgaaatttgaaaaacaa-tacaattatttggtgcatgcacaaaaactaaatgacaactcctc 1841700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 43358810 - 43358743
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaa 90  Q
    ||||||| ||||||||| || || ||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  43358810 ataatataaattcttatctttttaaattacaccaacaaaataacatttttatagtcaaatttatttaa 43358743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 1821958 - 1821906
Alignment:
Q  532 aaaaagaaatacaattatttggtgcatgcacaaaaacttaatggcagctcctc 584  Q
    ||||| ||||||||||||||| |||||||||||||||||| || || ||||||    
T  1821958 aaaaataaatacaattatttgttgcatgcacaaaaacttattgacaactcctc 1821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 19062871 - 19062831
Alignment:
Q  50 gacaccaacaaaataaaattcttaaagtcaaatttatttaa 90  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  19062871 gacaccaacaaaataacattcttatagtcaaatttatttaa 19062831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 47437811 - 47437870
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaat 82  Q
    ||||||| ||||||||| || || ||| ||||||||||||| ||||||||| ||||||||    
T  47437811 ataatataaattcttatcttttttaataacaccaacaaaatcaaattcttatagtcaaat 47437870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 1866081 - 1866127
Alignment:
Q  538 aaatacaattatttggtgcatgcacaaaaacttaatggcagctcctc 584  Q
    ||||||||||||| |||||||||||||||||  |||| |||||||||    
T  1866081 aaatacaattattcggtgcatgcacaaaaaccaaatgacagctcctc 1866127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 22711505 - 22711464
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaata 64  Q
    ||||||| ||||| |||||| |||||||||||||||||||||    
T  22711505 ataatataaattcatatttttttgaatgacaccaacaaaata 22711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 32676462 - 32676373
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaa 112  Q
    ||||||| ||||  |||||| || ||||||| ||| || |||| ||||||| || ||| ||||||||| |||| ||| ||||||||||||    
T  32676462 ataatataaatttatatttttttaaatgacatcaataatataacattcttagagacaactttatttaatgatataattgaaagtgaaaaa 32676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 1850682 - 1850742
Alignment:
Q  287 aaaaaagagttagataaaaactaatcttcaacttaactattgaagtgattcttttaggtgg 347  Q
    |||||||||| ||||||||| |||| || |||||||||||| |||| ||||| || |||||    
T  1850682 aaaaaagagtaagataaaaattaatttttaacttaactattaaagttattctcttgggtgg 1850742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 12391355 - 12391399
Alignment:
Q  421 tgataccgtcaaatttacgagataaaaataccctataaataaaac 465  Q
    ||||||| ||||||||||||||||| || || |||||||||||||    
T  12391355 tgataccttcaaatttacgagataagaagacactataaataaaac 12391399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 569
Target Start/End: Original strand, 17982602 - 17982638
Alignment:
Q  533 aaaagaaatacaattatttggtgcatgcacaaaaact 569  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  17982602 aaaaaaaatacaattatttgatgcatgcacaaaaact 17982638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 29286261 - 29286213
Alignment:
Q  17 taacgaataatattaattcttattttcttgaatgacaccaacaaaataa 65  Q
    |||| |||||||| ||||||||| || |||||| |||||||||||||||    
T  29286261 taacaaataatataaattcttatctttttgaatcacaccaacaaaataa 29286213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 4505861 - 4505730
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaa 122  Q
    ||||||| ||||||||| || |||||||||||||||||||||  ||| ||| |||||||| | ||||||| || ||  | || |||||||||||  | ||    
T  4505861 ataatataaattcttatctttttgaatgacaccaacaaaataggattattatagtcaaatatgtttaagggtataactggaaatgaaaaagtcagcctaa 4505762  T
Q  123 aacaatgtatcttctctttatatatagtatagat 156  Q
    ||| |||||  |||||||||||||||||||||||    
T  4505761 aaccatgta--ttctctttatatatagtatagat 4505730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 10214341 - 10214402
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaagg 92  Q
    ||||||||| |  |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10214341 aattcttatatatttgaatgacaccaacaaaataacattcttatagtcaaatttatttaagg 10214402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 47044854 - 47044947
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaa 124  Q
    ||||||||| || || ||| |||||| |||||||| ||||||| | |||||||| || |||| || ||| |||||||||||||||| |||||||    
T  47044854 aattcttatctttttcaataacaccagcaaaataacattcttataatcaaatttgttcaagggtataattgaaagtgaaaaagtcattcaaaaa 47044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 55109934 - 55109843
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagt 114  Q
    ||||||| |||||||||| | || | | ||||||||||||||| ||||||| | |||||||||||||||  || |||  |||||||||||||    
T  55109934 ataatataaattcttattatttttagtaacaccaacaaaataacattcttataatcaaatttatttaagagtataattaaaagtgaaaaagt 55109843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 48458494 - 48458452
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataa 65  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||    
T  48458494 ataatataaattcttatttttttgaacgacaccaacaaaataa 48458452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 6484781 - 6484696
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtca 116  Q
    ||||||||| || |||||||||||||| || ||| |||| ||| |  ||||||| ||||||| || ||| | ||||||||||||||    
T  6484781 aattcttatatttttgaatgacaccaataatatataattattatatgcaaatttgtttaagggtataattggaagtgaaaaagtca 6484696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 44342355 - 44342392
Alignment:
Q  26 atattaattcttattttcttgaatgacaccaacaaaat 63  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  44342355 atataaattcttatttttttgaatgacaccaacaaaat 44342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 28477066 - 28477134
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    ||||||| |||||||||| | ||||| ||||||||||||||   | ||| |||||||||||| ||||||    
T  28477066 ataatataaattcttattattttgaaagacaccaacaaaatggcaatctaaaagtcaaatttgtttaag 28477134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 11420428 - 11420517
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaa 112  Q
    ||||||| ||||||||| || |||||  ||||||||||||||| ||||||| ||||||||||||||||   || ||| ||||||||||||    
T  11420428 ataatataaattcttatctttttgaacaacaccaacaaaataatattcttatagtcaaatttatttaaatgtataattgaaagtgaaaaa 11420517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 34151173 - 34151064
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaa 122  Q
    ||||||| ||||||||| || || ||||||||||||||||||  ||| ||| |||||||| ||||||||| || ||  |||| |||||||| ||| | ||    
T  34151173 ataatataaattcttatctttttaaatgacaccaacaaaataggattattatagtcaaatctatttaagggtataactgaaaatgaaaaagccaacctaa 34151074  T
Q  123 aacaatgtat 132  Q
    ||| ||||||    
T  34151073 aaccatgtat 34151064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 3501400 - 3501465
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttattt 88  Q
    ||||||| | |||||||  | |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  3501400 ataatataagttcttatcattttgaatgacaccaacaaaataacatttttatagtcaaatttattt 3501465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 3541231 - 3541186
Alignment:
Q  33 ttcttattttcttgaatgacaccaacaaaataaaattcttaaagtc 78  Q
    ||||||| || |||||||||||||||||||||| ||||||| ||||    
T  3541231 ttcttatctttttgaatgacaccaacaaaataatattcttatagtc 3541186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 45064058 - 45064156
Alignment:
Q  25 aatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaa 124  Q
    ||||| |||||| ||||| |||||||||||||| ||||||| ||||||| ||| |||||| ||||| |||| ||| || ||||||||||| | |||||||    
T  45064058 aatataaattctgatttt-ttgaatgacaccaataaaataatattcttatagttaaatttgtttaaagatataattgatagtgaaaaagttagtcaaaaa 45064156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 10428072 - 10428123
Alignment:
Q  44 ttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggata 95  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  10428072 ttgaatgacaccaacaaaataatattcttatagtcaaatttgtttaacgata 10428123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 42734859 - 42734776
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagt 114  Q
    ||||||||| ||| | ||| ||||||||||||||| ||| ||| ||| |||||||||||| |||| |||  |||||||||||||    
T  42734859 aattcttatcttcgtcaataacaccaacaaaataatatttttacagttaaatttatttaatgatataattaaaagtgaaaaagt 42734776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 31239123 - 31239030
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtca 116  Q
    ||||||| ||||||||| || || ||||| ||||| ||||||  |||||||  || |||||| ||||||| || ||| ||||||||||||||||    
T  31239123 ataatataaattcttatctttttaaatgataccaataaaatagcattcttactgtgaaatttgtttaagggtataattgaaagtgaaaaagtca 31239030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 8723304 - 8723362
Alignment:
Q  47 aatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaag 105  Q
    ||||||||||| || |||| ||||||| |||||||||||||||||| || ||| |||||    
T  8723304 aatgacaccaaaaagataacattcttatagtcaaatttatttaagggtataattgaaag 8723362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 6732212 - 6732337
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaacaatgt 130  Q
    ||||||||| || || |||||| |||| ||||||  ||||||| | |||||||| |||| ||||| ||| | ||||||||||  |||  |||||| ||||    
T  6732212 aattcttatcttgttaaatgaccccaataaaatagtattcttataatcaaatttgtttagggatataattggaagtgaaaaaagcaacaaaaaactatgt 6732311  T
Q  131 atcttctctttatatatagtatagat 156  Q
    || |  | ||||||||||||| ||||    
T  6732312 atttcttttttatatatagtacagat 6732337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 10427544 - 10427477
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    ||||||| |||||||||||| || ||||||| ||||||||||  |||||| | |||||||||| |||||    
T  10427544 ataatataaattcttattttttttaatgacatcaacaaaatagcattctt-atgtcaaatttacttaag 10427477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 36564127 - 36564079
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattct 71  Q
    ||||||| |||||||||||| || ||||||| ||||||||||| |||||    
T  36564127 ataatataaattcttattttttttaatgacatcaacaaaataacattct 36564079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 18282283 - 18282342
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaa 90  Q
    |||| |||| || |||||||||||||||||||||| ||||||| |||||||||| |||||    
T  18282283 aatttttatctttttgaatgacaccaacaaaataatattcttatagtcaaatttgtttaa 18282342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 40483135 - 40483057
Alignment:
Q  13 aatataacgaataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    |||||||| |||||||| ||||||||| || ||||||||||||| ||| |||  ||||||| || ||||||| ||||||    
T  40483135 aatataacaaataatataaattcttatattgttgaatgacaccatcaatatagtattcttataggcaaatttgtttaag 40483057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 14001129 - 14001190
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    ||||||| ||||||||| || |||||||||| ||||||||||| |||||||  |||||||||    
T  14001129 ataatataaattcttatctttttgaatgacatcaacaaaataacattcttattgtcaaattt 14001190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 34303645 - 34303519
Alignment:
Q  25 aatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaa 124  Q
    ||||| ||| ||||| || |||||||| ||||| ||  || |||||||  ||  |||||||||||||| || ||| |||||||||||||||| ||||| |    
T  34303645 aatataaatccttatctttttgaatgataccaataatgtagaattcttgtagaaaaatttatttaagggtataattgaaagtgaaaaagtcactcaaata 34303546  T
Q  125 caatgtatcttctctttatatatagtata 153  Q
    | |||||  |||  |||||||||||||||    
T  34303545 ctatgta--ttcaatttatatatagtata 34303519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 40693396 - 40693453
Alignment:
Q  75 agtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaacaatgtat 132  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| || ||||| ||||||    
T  40693396 agtcaaatttatttaaggatataattgaaagtaaaaaagtcagtctaaaaccatgtat 40693453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 23085349 - 23085417
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    ||||||| |||||||||||| || | ||||||||||||||||| ||||||  | ||||||||| |||||    
T  23085349 ataatataaattcttatttttttaactgacaccaacaaaataacattcttttaatcaaatttacttaag 23085417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 29686233 - 29686301
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    ||||||| ||||||||| || |||||||||||||| ||| ||| ||||||| ||| |||||| ||||||    
T  29686233 ataatataaattcttatctttttgaatgacaccaataaattaacattcttatagtaaaatttgtttaag 29686301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 37516567 - 37516653
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaa 111  Q
    ||||||| |||||||||||| |||||||||||||||||||||| |||  || ||||||| || | |||||||  ||| |||||||||||    
T  37516567 ataatataaattcttatttt-ttgaatgacaccaacaaaataacatt-atatagtcaaaattgtctaaggatgtaattgaaagtgaaaa 37516653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 3945192 - 3945274
Alignment:
Q  33 ttcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtc 115  Q
    ||||||| || || ||||||||| ||||||||| ||| ||| |||||||||| ||||||  || | | |||||||||||||||    
T  3945192 ttcttatattttttaatgacacctacaaaataacattgttatagtcaaatttgtttaagagtatagttgaaagtgaaaaagtc 3945274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 47410517 - 47410645
Alignment:
Q  26 atattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaac 125  Q
    |||| ||||||||| || |||||||||||||| ||||||  ||| ||| |||||||||| |||||   || ||| ||||||||||| | || || ||| |    
T  47410517 atataaattcttatctttttgaatgacaccaataaaatatcatttttatagtcaaatttgtttaattgtataattgaaagtgaaaatgacactccaaacc 47410616  T
Q  126 aatgtatcttctctttatatatagtatagat 156  Q
     |||||  || ||||||||||||||||||||    
T  47410617 tatgta--ttttctttatatatagtatagat 47410645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 26410455 - 26410397
Alignment:
Q  26 atattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    |||| ||||||||| || || |||||||||||||||||| ||||||||| |||||||||    
T  26410455 atataaattcttatcttttttaatgacaccaacaaaatacaattcttaatgtcaaattt 26410397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 11174679 - 11174735
Alignment:
Q  363 caaaaaggag-agcagcaaagaactgctacctcaaaagcttagatacatggagaagg 418  Q
    |||||||||| |||||||||||||||| |||||||||| ||| ||| ||||||||||    
T  11174679 caaaaaggaggagcagcaaagaactgccacctcaaaagtttatatatatggagaagg 11174735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 36643594 - 36643722
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaa 122  Q
    ||||||| |||||||||  | |||||||| ||||||||||||| ||||||| ||| | || | ||||||| || ||  |||||| |||||||||    ||    
T  36643594 ataatataaattcttatcgttttgaatgataccaacaaaataacattcttatagttagatctgtttaagggtataactgaaagttaaaaagtcagctcaa 36643693  T
Q  123 aacaatgtatcttctctttatatatagtata 153  Q
    || ||  ||| ||||||||||||||||||||    
T  36643694 aataa--tatgttctctttatatatagtata 36643722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 50585800 - 50585733
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaa 90  Q
    ||||||| |||| |||| || |||||| ||||||||||||||| |||||||  |||||||||| ||||    
T  50585800 ataatataaatttttatctttttgaataacaccaacaaaataatattcttattgtcaaatttagttaa 50585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 39199173 - 39199223
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattctta 73  Q
    ||||||| |||||||||||| |||||||||| ||||||||||  |||||||    
T  39199173 ataatataaattcttatttttttgaatgacaacaacaaaatatcattctta 39199223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 47410976 - 47410918
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaa 81  Q
    ||||||| ||||||||| || || ||| |||||||||||||| |||||||| |||||||    
T  47410976 ataatataaattcttatcttttttaataacaccaacaaaatataattcttatagtcaaa 47410918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 2594539 - 2594478
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    ||||||| ||||||||| || ||||||||||||| |||||||| ||| |||  |||||||||    
T  2594539 ataatataaattcttatctttttgaatgacaccagcaaaataacattgttatggtcaaattt 2594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 14352153 - 14352206
Alignment:
Q  101 gaaagtgaaaaagtcaatcaaaaacaatgtatcttctctttatatatagtatagat 156  Q
    ||||||||||||| ||||| ||||| | ||||  ||||||||||||||||||||||    
T  14352153 gaaagtgaaaaagccaatctaaaactaagtat--tctctttatatatagtatagat 14352206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 7301647 - 7301553
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggataaaatcgaaagtgaaaaagtcaatcaaaaac 125  Q
    |||||| || || |||||| |||||||||| |||| ||| ||| || ||||||| ||||| |||| ||| ||||| ||||||||||||| |||||    
T  7301647 aattctaatctttttgaataacaccaacaatataatatttttatagacaaatttgtttaatgatataattgaaagggaaaaagtcaatccaaaac 7301553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 35468785 - 35468724
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    ||||||| ||||||||| || || | ||||||||||||||||| ||||||| ||||||||||    
T  35468785 ataatataaattcttatattttttattgacaccaacaaaataacattcttatagtcaaattt 35468724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 741328 - 741391
Alignment:
Q  23 ataatattaattcttattttcttgaa-tgacaccaacaaaataaaattcttaaagtcaaattta 85  Q
    ||||||| |||||||||||| || || ||||||||||||||||  |||||| ||||||||||||    
T  741328 ataatataaattcttattttttttaaatgacaccaacaaaatagcattcttgaagtcaaattta 741391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 8904967 - 8905025
Alignment:
Q  26 atattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    |||| ||||||||| || ||||||||||||| |||||||  ||||||| ||||||||||    
T  8904967 atataaattcttatcttgttgaatgacaccagcaaaatagcattcttatagtcaaattt 8905025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 11694222 - 11694283
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    ||||||| |||| |||| || |||||||||||||||||||||  |||||||  |||||||||    
T  11694222 ataatataaatttttatatttttgaatgacaccaacaaaatagcattcttatggtcaaattt 11694283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 28417014 - 28416973
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaata 64  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  28417014 ataatataaattcttatctttttgaatgacaccaacaaaata 28416973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 744915 - 744983
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaag 91  Q
    ||||||| |||| |||| || || ||| |||||||||| |||| ||||||| || ||||||||||||||    
T  744915 ataatataaatttttatctttttaaataacaccaacaatataacattcttatagacaaatttatttaag 744983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28176756 - 28176661
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaagg--ataaaatcgaaagtgaaaaagtca 116  Q
    ||||||| |||||||||||| |  | ||||| |||| |||||| ||||||| ||||||||||||||| ||  ||| ||| ||||| ||||||||||    
T  28176756 ataatataaattcttattttttgcagtgacatcaactaaataacattcttatagtcaaatttatttacgggtatataattgaaagcgaaaaagtca 28176661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 32279623 - 32279695
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaaggata 95  Q
    ||||||| ||||||||| || || ||||||||||||||||||| ||| |||  |||||||||  |||||||||    
T  32279623 ataatataaattcttatcttttttaatgacaccaacaaaataacatttttatggtcaaatttgcttaaggata 32279695  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 17294011 - 17294072
Alignment:
Q  31 aattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaatttatttaagg 92  Q
    ||||||||| || | |||||| ||||||||||||  ||||||| |||| |||||||||||||    
T  17294011 aattcttatcttttcgaatgataccaacaaaatagcattcttatagtctaatttatttaagg 17294072  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 65583 - 65522
Alignment:
Q  23 ataatattaattcttattttcttgaatgacaccaacaaaataaaattcttaaagtcaaattt 84  Q
    ||||||| ||||||||| || |||||||| ||||||||||||| ||| ||| ||||| ||||    
T  65583 ataatataaattcttatctttttgaatgataccaacaaaataatatttttatagtcagattt 65522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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