View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1863_high_11 (Length: 510)

Name: NF1863_high_11
Description: NF1863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1863_high_11
NF1863_high_11
[»] chr3 (11 HSPs)
chr3 (13-248)||(48402435-48402671)
chr3 (382-497)||(48402276-48402391)
chr3 (163-247)||(48394383-48394467)
chr3 (174-247)||(39623993-39624066)
chr3 (174-247)||(39918624-39918697)
chr3 (174-247)||(41665431-41665504)
chr3 (183-247)||(52044108-52044172)
chr3 (174-241)||(31604695-31604762)
chr3 (183-241)||(27481714-27481772)
chr3 (174-247)||(47667108-47667181)
chr3 (191-235)||(48413996-48414040)
[»] chr1 (9 HSPs)
chr1 (168-248)||(5757791-5757871)
chr1 (168-248)||(6073241-6073321)
chr1 (183-247)||(3820306-3820370)
chr1 (174-241)||(5031736-5031803)
chr1 (174-241)||(17983258-17983325)
chr1 (174-241)||(20607548-20607615)
chr1 (174-241)||(20610819-20610886)
chr1 (183-229)||(41985258-41985304)
chr1 (183-241)||(41987975-41988033)
[»] chr7 (7 HSPs)
chr7 (174-241)||(31516559-31516626)
chr7 (174-247)||(23260674-23260747)
chr7 (183-248)||(38538917-38538982)
chr7 (183-247)||(39796752-39796816)
chr7 (174-241)||(28040460-28040527)
chr7 (174-241)||(33171122-33171189)
chr7 (174-241)||(44206096-44206163)
[»] chr8 (6 HSPs)
chr8 (174-247)||(9944023-9944096)
chr8 (183-247)||(18364540-18364604)
chr8 (183-247)||(27547181-27547245)
chr8 (183-247)||(35929253-35929317)
chr8 (174-241)||(43731590-43731657)
chr8 (174-241)||(43748336-43748403)
[»] chr5 (4 HSPs)
chr5 (174-235)||(20200386-20200447)
chr5 (183-247)||(8880751-8880815)
chr5 (183-241)||(32684991-32685049)
chr5 (174-241)||(20190352-20190419)
[»] chr4 (1 HSPs)
chr4 (169-248)||(24267486-24267565)
[»] chr2 (4 HSPs)
chr2 (174-241)||(27282669-27282736)
chr2 (183-241)||(36047056-36047114)
chr2 (183-241)||(36048287-36048345)
chr2 (183-241)||(44206827-44206885)
[»] scaffold0012 (1 HSPs)
scaffold0012 (174-229)||(184931-184986)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 13 - 248
Target Start/End: Complemental strand, 48402671 - 48402435
Alignment:
Q  13 atctgcgtctgtagttgctgcatttatt-tatttatttttggttnnnnnnngaggccttgtagttgctgcattttaaactatatcttcatcaatctaatg 111  Q
    |||||||||||||||||||||||||||| | ||| ||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48402671 atctgcgtctgtagttgctgcatttattatttttttttttggtacaaaagagaggccttgtagttgctgcattctaaactatatcttcatcaatctaatg 48402572  T
Q  112 caattgttttatagaaagatttacatgttatttagtaaacttcagaggggtaattagcaaataagttgttctagtatagtggtaagtatttccgcctgtc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  48402571 caattgttttatagaaagatttacatgttatttagtaaacttcagaggggtaatcagcaaataagttgttgtagtatagtggtaagtattcccgtctgtc 48402472  T
Q  212 atgcgggtgacccgggtttgatcctcggcaatggcga 248  Q
    | |||||||||| | |||||||||  ||||| |||||    
T  48402471 acgcgggtgacctgagtttgatccctggcaacggcga 48402435  T

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Target: chr3; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 382 - 497
Target Start/End: Complemental strand, 48402391 - 48402276
Alignment:
Q  382 caaatcaaccttatgccttcagccttctgcatatcactcttgatatcaaatagaaagataaaattgcaaccaacaatgaattaggccactaaatgccttg 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48402391 caaatcaaccttatgccttcagccttctgcatatcactcttgatatcaaatagaaagataaaattgcaaccaacaatgaattaggccactaaatgccttg 48402292  T
Q  482 agctccttaaagatat 497  Q
    ||||||||||||||||    
T  48402291 agctccttaaagatat 48402276  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 48394467 - 48394383
Alignment:
Q  163 aattagcaaataagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||| ||||| ||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  48394467 aattatcaaatgagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 48394383  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 39624066 - 39623993
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  39624066 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 39623993  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 39918697 - 39918624
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| ||||| |||||| ||||    
T  39918697 aagttgttgtagtatagtggtaagtattcccgcctgtcacacgggtgacccgggttcgatccccggcaacggcg 39918624  T

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Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 41665504 - 41665431
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  41665504 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 41665431  T

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Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 52044108 - 52044172
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  52044108 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 52044172  T

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Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 31604695 - 31604762
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  31604695 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 31604762  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 27481772 - 27481714
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||| ||||| |||||    
T  27481772 tagtatagtggtaagtattcccgcctgtcacgcgggtgatccgggttcgatccccggca 27481714  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 47667181 - 47667108
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||| ||| ||||||||||||||||||| |||||||||| ||  |||||||||||| ||||| |||||| ||||    
T  47667181 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcaagtgacccgggttcgatccccggcaacggcg 47667108  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 48414040 - 48413996
Alignment:
Q  191 tggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcc 235  Q
    ||||||||||| |||| ||||| ||||||||| ||||||||||||    
T  48414040 tggtaagtattcccgcttgtcacgcgggtgactcgggtttgatcc 48413996  T

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Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 5757791 - 5757871
Alignment:
Q  168 gcaaataagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcga 248  Q
    |||||| ||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| |||||    
T  5757791 gcaaatcagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcga 5757871  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 6073321 - 6073241
Alignment:
Q  168 gcaaataagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcga 248  Q
    |||||| ||||||| ||||||||||||||||||| || ||||||| |||||||||||||||| ||||| |||||| |||||    
T  6073321 gcaaattagttgttgtagtatagtggtaagtattcccacctgtcacgcgggtgacccgggttcgatccccggcaacggcga 6073241  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 3820370 - 3820306
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  3820370 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 3820306  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 5031736 - 5031803
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  5031736 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 5031803  T

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Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 17983258 - 17983325
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  17983258 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 17983325  T

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Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 20607548 - 20607615
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  20607548 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 20607615  T

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Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 20610819 - 20610886
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||||||| ||||||||||||||||||| |||| |||||  ||||||||||||||| ||||| |||||    
T  20610819 aagttgttgtagtatagtggtaagtattcccgcttgtcacccgggtgacccgggttcgatccccggca 20610886  T

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Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 41985258 - 41985304
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtt 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  41985258 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggtt 41985304  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 41987975 - 41988033
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| ||||||||||  |||||||||| |||||||||| |||||    
T  41987975 tagtatagtggtaagtattcccgcctgtcacccgggtgacccaggtttgatccccggca 41988033  T

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Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 31516559 - 31516626
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  31516559 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatcctcggca 31516626  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 23260674 - 23260747
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  23260674 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 23260747  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 38538917 - 38538982
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcga 248  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| |||||    
T  38538917 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcga 38538982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 39796816 - 39796752
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  39796816 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 39796752  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 28040527 - 28040460
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  28040527 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 28040460  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 33171122 - 33171189
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  33171122 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 33171189  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 44206096 - 44206163
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  44206096 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 44206163  T

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Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 9944096 - 9944023
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  9944096 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 9944023  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18364540 - 18364604
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  18364540 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 18364604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 27547181 - 27547245
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  27547181 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 27547245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 35929253 - 35929317
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  35929253 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 35929317  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 43731657 - 43731590
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  43731657 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 43731590  T

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Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 43748403 - 43748336
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  43748403 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 43748336  T

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Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 20200447 - 20200386
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcc 235  Q
    |||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  20200447 aagtcgttgtagtatagtggtaagtattcctgcctgtcatgcgggtgacccgggtttgatcc 20200386  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 8880751 - 8880815
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcg 247  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  8880751 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg 8880815  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 32684991 - 32685049
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  32684991 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 32685049  T

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Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 20190419 - 20190352
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| | |||||||||||||| ||||| |||||    
T  20190419 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgtgggtgacccgggttcgatccccggca 20190352  T

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Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 24267565 - 24267486
Alignment:
Q  169 caaataagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggcaatggcga 248  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||| ||||  |||||||||| ||||| |||||| |||||    
T  24267565 caaatgagtcgttgtagtatagtggtaagtatttccgcctgtcacgcggacgacccgggttcgatccccggcaacggcga 24267486  T

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Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 27282736 - 27282669
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    |||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  27282736 aagtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 27282669  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 36047056 - 36047114
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  36047056 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 36047114  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 36048287 - 36048345
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  36048287 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggca 36048345  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 44206827 - 44206885
Alignment:
Q  183 tagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtttgatcctcggca 241  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| || ||||| |||||    
T  44206827 tagtatagtggtaagtattcccgcctgtcacgcgggtgacccggattcgatccccggca 44206885  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 184931 - 184986
Alignment:
Q  174 aagttgttctagtatagtggtaagtatttccgcctgtcatgcgggtgacccgggtt 229  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||    
T  184931 aagttgttgtagtatagtggtaagtatttccatctgtcatgcgggtgatccgggtt 184986  T

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