View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1863_high_117 (Length: 202)
Name: NF1863_high_117
Description: NF1863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1863_high_117 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 44576602 - 44576789
Alignment:
| Q |
1 |
aaataaagagttagatataaaataatttcttaaattaccagaagtgatgcaatacaaccatataggagggtccggaacctgccaagataagtatcagaaa |
100 |
Q |
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| T |
44576602 |
aaataaagagttagatataaaataatttcttaaattaccagaagtgatgcaatacaaccatataggagggtccggaacctcccaagataagtatcagaaa |
44576701 |
T |
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| Q |
101 |
tgaaagcaccaaataatgatgcaatgtttgacgatccattccaaatttgcaccacattaaccacaaatatcccactcatgttgtaatt |
188 |
Q |
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| T |
44576702 |
tgaaagcaccaactaatgatgcaatgtttgacgatccattccaaatttgcaccacattaaccacaaatatcccactcatgttgtaatt |
44576789 |
T |
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