View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1863_high_75 (Length: 267)
Name: NF1863_high_75
Description: NF1863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1863_high_75 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 45015997 - 45015737
Alignment:
| Q |
1 |
tatttaaaaatgaagaattatttatccacccacaacaaattgataaaggttgtataaaccatgttcctggaaagtgattaggaactaatccaaaatgttt |
100 |
Q |
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| T |
45015997 |
tatttaaaaatgaagaattatttatccacccacaacaaattgataaaggttgtataaaccatgttcctggaaagtgattaggaactaatccaaaatgttt |
45015898 |
T |
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| Q |
101 |
ctttaaattatgtaatcatgtattggccacttagtagacttaaaaagtatctcatatcatatggtatattatctaatattaatttgttttattttaaatt |
200 |
Q |
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| T |
45015897 |
ctttaaattatgtaatcatgtattggccacttagtagacttaaaaagtatctcatatcatatggtatattatctaatattaatttgttttattttaaatt |
45015798 |
T |
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| Q |
201 |
gagaaagatgtaacagtccaacgtcgaatacataaaagtgtttaatgtggtattcatatca |
261 |
Q |
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||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||| |
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| T |
45015797 |
gagaaagatgtaacagtcccacatcgaatacataaaagtgtttactgtggtattcaaatca |
45015737 |
T |
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