View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1863_high_8 (Length: 561)
Name: NF1863_high_8
Description: NF1863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1863_high_8 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 448; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 31 - 551
Target Start/End: Original strand, 4124139 - 4124659
Alignment:
| Q |
31 |
tgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgac |
130 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124139 |
tgggatacctcagacagccttggacaatctttgagtaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgac |
4124238 |
T |
|
| Q |
131 |
taagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagcataaaaagataagtacaagcacgtacga |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4124239 |
taagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagcataaaaagagaagtacaagcacgtacga |
4124338 |
T |
|
| Q |
231 |
cgtgtcaccaaccttgagagtggtaataaaatatttgtgtgggtgcatagccannnnnnnaataccaacatacgttggtttagtattactttttgctcaa |
330 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4124339 |
cgtgtcgccaaccttgagagtggtaataaaatatttgtgtgagtgcatagccatttttttaataccaacatacgttagtttagtattactttttgctcaa |
4124438 |
T |
|
| Q |
331 |
aatattcgggtgccagcattctgctgtgaattttaaaattcagcataatagataggtttgaaattcctctggtttcttttatttactgtgttgatttatg |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4124439 |
aatattcgggtgccagcattctgctgtgaattttaaaattcagcataatagataggtttgaaattcctctggtttcttttatttactgtgttgatttatg |
4124538 |
T |
|
| Q |
431 |
gactgatgtgtgaattttgtttgtacttgtatacattgtaactaaattcatagttagggctatgatggatcttttgtattataatcgaactattcatagt |
530 |
Q |
| |
|
||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
4124539 |
gactgttatgtgaattttgtttgtacttatatacattgtaactaaattcatagttagggctatgatggatcttttgtattataatcaaattattcatagt |
4124638 |
T |
|
| Q |
531 |
tttcaactgttttgtcctttg |
551 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4124639 |
tttcaactgttttgtcctttg |
4124659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 4344538 - 4344377
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
4344538 |
gtccaatactttgggaaatctcagacagccttggacaatctttgagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagaca |
4344439 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
181 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
4344438 |
atgagaatgactgagattgagaattttcagctgatccatcctctgcaagaacggaaatatta |
4344377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 4320808 - 4320991
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
||||||| || |||||||||| ||||||||| || || |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
4320808 |
gtccaatgctatgggaaacctgagacagccttgggcaatcttcgagcactagcttttcaagattaggcaagtatgaaaagtcaggggtctgtgtcaaatg |
4320907 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaacttgcggataaagca |
203 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| |||||||| || | ||||||||||||||| || ||||||||||| |
|
|
| T |
4320908 |
atgagaatgactaagatttagaatcttcagctgctccatcctctgcaaaaataaaaatattatagagaagttacggataaagca |
4320991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 4335226 - 4335071
Alignment:
| Q |
31 |
tgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgac |
130 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| || || |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
4335226 |
tgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgac |
4335127 |
T |
|
| Q |
131 |
taagattgagaattttcagctgctccattctctgcaag-aacagaaatattataga |
185 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
4335126 |
taagattgagaattttcaactgctccatcctctgcaagaaacagaaatattataga |
4335071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 4360969 - 4360808
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||| ||||| || || ||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4360969 |
gtccaatactttgggaaatctcagacagccttggacaatctttaagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagata |
4360870 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
181 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||| || |||| |||||||| |
|
|
| T |
4360869 |
ttgagaatgactaagattgagaattttcagctgctccatcccctgaaataacataaatatta |
4360808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 4133623 - 4133774
Alignment:
| Q |
31 |
tgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgac |
130 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| | || ||||| || ||||||| || |||||| || ||||||||| ||| |||||||||||| |
|
|
| T |
4133623 |
tgggaaacctcagacagccttggacaatctttgagtattagtttttctagattaggcatgtgtgaaaaatctggggtctgtactagacaatgagaatgac |
4133722 |
T |
|
| Q |
131 |
taagattgagaattttcagctgctccattctctgcaagaacagaaatattat |
182 |
Q |
| |
|
|||||||||||| ||| || | ||||| ||||||||||||| |||| |||| |
|
|
| T |
4133723 |
taagattgagaaattttagattctccagcctctgcaagaacaaaaatgttat |
4133774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 6675563 - 6675469
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||| | | || || ||||||||||||||||| |||||||| |
|
|
| T |
6675563 |
ggacagtctttgagcaccagcttttcaatattgggcaagtatgaaaagtctggggtttcagccaaattttgagaatgactaagattaagaatttt |
6675469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 6728297 - 6728172
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||| |||||||| ||| ||||| || ||||||| ||||||||| ||||||||||| ||||| ||||| |||||||| ||||| | |||| || |
|
|
| T |
6728297 |
tccaatgctttgggagaccgtagacaaacttggacagtttttgagcacgagcttttcaagattaggtaagtaggaaaagtctggggtttcagtcaaatcc |
6728198 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
|||||||||||||||| |||||||| |
|
|
| T |
6728197 |
agagaatgactaagattaagaatttt |
6728172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 6758584 - 6758487
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcag |
149 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||| ||||| |||||||| ||| | | |||| || |||||||||||||||| ||||||||||| |
|
|
| T |
6758584 |
ggacagtttttgagcaccagcttttcaagattaggaaagtaggaaaagtctgggcttttagtcaaatccagagaatgactaagattaagaattttcag |
6758487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 521
Target Start/End: Complemental strand, 4360150 - 4360050
Alignment:
| Q |
421 |
ttgatttatggactgatgtgtgaattttgtttgtacttgtatacattgtaactaaattcatagttagggctatgatggatcttttgtattataatcgaac |
520 |
Q |
| |
|
|||||||||| ||| | |||| ||||||||| |||| |||||||||||| |||||||| ||||||| ||||||||||||| |||| ||||||| ||| |
|
|
| T |
4360150 |
ttgatttatgtactactatgtggattttgtttatactattatacattgtaaacaaattcattgttagggttatgatggatcttatgtaatataatcaaac |
4360051 |
T |
|
| Q |
521 |
t |
521 |
Q |
| |
|
| |
|
|
| T |
4360050 |
t |
4360050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 6752820 - 6752726
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| ||||||||||| || || | |||| || ||||||||||||||||| |||||||| |
|
|
| T |
6752820 |
ggacagtctttgagtacaagcttttcaagattaggcatatatgaaaagtctggagtttcggtcaaatcctgagaatgactaagattaagaatttt |
6752726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 6772955 - 6772870
Alignment:
| Q |
61 |
ttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
||||| || ||||||||||| || ||||||||||||||||| ||||| | |||| || ||| |||||||||||||| |||||||| |
|
|
| T |
6772955 |
ttgagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaatttt |
6772870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 6498747 - 6498841
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||||||||| | |||||| ||||| | ||| || ||||||||||||||||| |||||||| |
|
|
| T |
6498747 |
ggacagtctttgagtactagcttttcaatattaggcaagtacgtaaagtctggggtttcaatcaaattctgagaatgactaagattaagaatttt |
6498841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 6588417 - 6588511
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
||||||| ||| ||||| ||||||||||| ||||| ||||| |||||||| ||||| | |||| || |||||||||||||||| |||||||| |
|
|
| T |
6588417 |
ggacagttttttagcacaagcttttcaagattaggtaagtaggaaaagtctggggtttcagtcaaatctagagaatgactaagattaagaatttt |
6588511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 6621728 - 6621822
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
||||||||||||||||| |||||||| || ||||||| ||||||||| || ||||| | |||| || ||||||||||||||| |||||||| |
|
|
| T |
6621728 |
ggacagtctttgagcactagcttttcgagattaggcatgtatgaaaaatctggggtttcagtcaaatccaaagaatgactaagattaagaatttt |
6621822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 6837165 - 6837040
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||| || ||||| ||| |||||| || |||||||||||||| || ||||||||||| || |||| ||||| ||||| || || | |||| || |
|
|
| T |
6837165 |
tccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatatatgagaagtctggagtttcagtcaaatcc |
6837066 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
6837065 |
tgagaatgactaagattaagaatttt |
6837040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 6532422 - 6532545
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||| || ||||| ||| |||||| || |||||||||||||| || | ||||||||| ||||||| |||||||||| ||||| | |||| || |
|
|
| T |
6532422 |
tccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaagattaggcatatatgaaaagtttggggtttcagtcaaatgt |
6532521 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaatt |
144 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
6532522 |
agagaatgactaagattaagaatt |
6532545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 6650927 - 6650872
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
6650927 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6650872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 5e-42; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 5182117 - 5182284
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||| ||| |||| || | || ||||||||||||||||| ||||||||| || |||| || |||| || |
|
|
| T |
5182117 |
tccaatactttgggaaacttcagacaacttcggacaatctgtgagtactaactgttcaaggttaggcaagtttgaaaagtctggagtctttgacagaaaa |
5182216 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
5182217 |
tgagaatgactaagattgagaattttcagcttctccagcctctgcaagaacagaaatgttataaagaa |
5182284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 5284592 - 5284746
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||| || |||||||||||| | |||| |||||||| |||||||||| |
|
|
| T |
5284592 |
gaaacctcagatagccttggacaatctttgagcactagcttttcaagattaggcatgttcgaaaagtcagggcttcgtgtgagataatgggaatgactaa |
5284691 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
5284692 |
gattgagaattttcagcttctccatcctctgcaagaacataaatattattgagaa |
5284746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 5354835 - 5354971
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||| |||||||| || ||||||||||| ||||||| ||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| | |
|
|
| T |
5354835 |
ggacaatctttgagtacaagcttttcaagattaggcatgtaagaaaagtcaggggtatgtgtcagacaatgtgaatgactaagattgagaattttcagat |
5354934 |
T |
|
| Q |
152 |
gctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
5354935 |
gctccattctctgcaagaacatacatattaaagagaa |
5354971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 5102818 - 5102957
Alignment:
| Q |
35 |
aaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaag |
134 |
Q |
| |
|
|||||||||||| | | ||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || |||||| |||||||||||||||| |
|
|
| T |
5102818 |
aaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcaagtatgaaaagtcaggggtgtgcgtcagacaatgagaatgactaag |
5102917 |
T |
|
| Q |
135 |
attgagaattttcagctgctccattctctgcaagaacaga |
174 |
Q |
| |
|
||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
5102918 |
atttagaattttcagcttttccaacctctgcaagaacaga |
5102957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 5176631 - 5176470
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
||||||| || |||||||||||| || ||| || || ||| |||| | ||||||||||| ||||||| || ||||||||| ||||||| ||||||||| |
|
|
| T |
5176631 |
gtccaatgctatgggaaacctcacgcaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagata |
5176532 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
181 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
5176531 |
atgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatatta |
5176470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 5278457 - 5278297
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||| || || ||||||||| ||| ||| || || ||| |||| | ||||||||||| ||||||| || ||||||||| ||||||| |||||||||| |
|
|
| T |
5278457 |
tccaatgctatgagaaacctcacacaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagataa |
5278358 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatatta |
181 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
5278357 |
tgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatatta |
5278297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 5396787 - 5396674
Alignment:
| Q |
75 |
ttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacaga |
174 |
Q |
| |
|
|||||| ||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
5396787 |
ttcaagattaggcatgtttgaaaagtctggggtctgtgtcaaataatgagaatgactaagattgagaattttcagcttctccagcctctgcaagaacata |
5396688 |
T |
|
| Q |
175 |
aatattatagagaa |
188 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
5396687 |
aatattataaagaa |
5396674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 5096586 - 5096446
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||||| | | ||||| ||||| || |||||||| ||||| ||||||| |||||||||||| ||||| ||||||||| ||||||||||||||| |
|
|
| T |
5096586 |
gaaacctcagacaacattggacaatctttaagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgtgtcagacaatgagaatgactaa |
5096487 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacaga |
174 |
Q |
| |
|
|||| ||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
5096486 |
gatttagaattttcagtttttccatcctctgcaagaacaga |
5096446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 5690348 - 5690516
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
||||||| || |||||||||||| || ||| ||||| |||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
5690348 |
gtccaatgctatgggaaacctcacgcaaccttggacaatctttgagtattagcttttcaagattaggcatgattgaaaagtctggggtctgtgtcagata |
5690447 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
|||||| |||||||||||||||||||| |||| |||||| ||| |||||| | |||||||| |||||| |
|
|
| T |
5690448 |
atgagagtgactaagattgagaattttaagcttctccatcatctacaagaatataaatattaaagagaa |
5690516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 5128620 - 5128758
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||||| | | | ||| |||||||| || ||||||||||| ||||| || ||||||||||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
5128620 |
gaaacctcagacaacattgaacaatctttgagtactagcttttcaagattaggtaaatatgaaaagtctggggtgtgtgtcagacaatgagaatgactat |
5128719 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaaca |
172 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
5128720 |
gattgagaattttcagcttctccatcatctgcaagaaca |
5128758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 174
Target Start/End: Original strand, 5157831 - 5157971
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||||| | | ||||| |||||||| |||||||| ||||| ||||||| |||||||||||| ||||| || |||||| ||||||||||||||| |
|
|
| T |
5157831 |
gaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaa |
5157930 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacaga |
174 |
Q |
| |
|
|||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
5157931 |
gatttagaatttttagcttttccatcatctgcaagaacaga |
5157971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 5370449 - 5370311
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||||||| | | ||| |||||||| || | ||||||||| |||||||||||||||||||| ||||| || |||||| ||||||||||||||| |
|
|
| T |
5370449 |
gaaacctcagacagcattgaacaatctttgagtactaacttttcaagcttaggcaagtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaa |
5370350 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaaca |
172 |
Q |
| |
|
|||| |||||||| |||| ||||| |||||||||||| |
|
|
| T |
5370349 |
gatttagaatttttagcttttccatcatctgcaagaaca |
5370311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 5425788 - 5425649
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
|||| |||||||| | | ||||| ||||||||||||||||||||||| ||||||| | ||| |||||||||||| | |||||| ||||||||||||||| |
|
|
| T |
5425788 |
gaaatctcagacaacattggacaatctttgagcaccagcttttcaagattaggcatgaatgtaaagtcaggggtgcgcgtcagacaatgagaatgactaa |
5425689 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacag |
173 |
Q |
| |
|
|||| ||||||||||||| ||||| | |||||| ||||| |
|
|
| T |
5425688 |
gatttagaattttcagcttttccatccactgcaaaaacag |
5425649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 177
Target Start/End: Complemental strand, 5447465 - 5447322
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
||||||||||||| | | ||||| |||||||| || ||||||||||| ||||||||| |||||||||| ||| | | ||||||| |||||||||||||| |
|
|
| T |
5447465 |
gaaacctcagacaacattggacaatctttgagtactagcttttcaagattaggcaagcatgaaaagtccgggatgtttgtcagacgatgagaatgactaa |
5447366 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacagaaat |
177 |
Q |
| |
|
|||||||| ||||||| | ||||| ||||||||||||| |||| |
|
|
| T |
5447365 |
gattgagatttttcagattttccatcctctgcaagaacaaaaat |
5447322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 5066915 - 5067037
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||| |||||||| || ||||||||||| ||||||| ||||||||||||||||| || ||||| |||||||||| |||||||| ||||||||||||| |
|
|
| T |
5066915 |
ggacaatctttgagtactagcttttcaagattaggcatatatgaaaagtcaggggtgtgcatcagacaatgagaatggctaagatttagaattttcagct |
5067014 |
T |
|
| Q |
152 |
gctccattctctgcaagaacaga |
174 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
5067015 |
tttccatcctctgcaagaacaga |
5067037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 5433913 - 5433775
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
|||| |||||| || || ||||| ||| |||| || | ||||||||| |||||||| | ||||||||| || || ||||||||||||||| ||||||||| |
|
|
| T |
5433913 |
gaaatctcagaaagacttggacaatctgtgagtactaacttttcaagattaggcaaatttgaaaagtctggtgtttgtgtcagataatgacaatgactaa |
5433814 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaaca |
172 |
Q |
| |
|
| || ||||||||||||| |||||||||||||||||||| |
|
|
| T |
5433813 |
ggttaagaattttcagcttctccattctctgcaagaaca |
5433775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 5344701 - 5344585
Alignment:
| Q |
72 |
cttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaac |
171 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
5344701 |
cttttcaagattaggtaagtaagaaaagtccggggtttgtatcaggtaatgagaatgactaagattgagaattttcagcttctccatcatctgtaagaac |
5344602 |
T |
|
| Q |
172 |
agaaatattatagagaa |
188 |
Q |
| |
|
| |||| || ||||||| |
|
|
| T |
5344601 |
ataaatgttgtagagaa |
5344585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 5074100 - 5074234
Alignment:
| Q |
23 |
caatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatg |
122 |
Q |
| |
|
||||||| || |||||||| |||| ||| ||||| ||| |||| || || | |||||| |||||||||| |||||| || || || || ||||||||||| |
|
|
| T |
5074100 |
caatactatgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagattaggcaagtttgaaaaatctggagtttgcgtcagataatg |
5074199 |
T |
|
| Q |
123 |
agaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||| |
|
|
| T |
5074200 |
agaatgactaagattgagtattttcagcttctcca |
5074234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 5257555 - 5257685
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||| |||||||| || | ||||||||| ||||||| || |||||||||||| | ||| ||| || | |||||||||||||||||||||||||||| |
|
|
| T |
5257555 |
ggacaatctttgagtactaacttttcaagattaggcatgttggaaaagtcagggcttcttgtgagacaacgggaatgactaagattgagaattttcagct |
5257654 |
T |
|
| Q |
152 |
gctccattctctgcaagaacagaaatattat |
182 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |
|
|
| T |
5257655 |
tctccatcctctgcaagaacataaatattat |
5257685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 5147140 - 5147237
Alignment:
| Q |
75 |
ttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaaca |
172 |
Q |
| |
|
|||||| |||||||||| | |||||| ||||||||||||| ||||||||| |||||||| ||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
5147140 |
ttcaagattaggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaaca |
5147237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 34 - 183
Target Start/End: Complemental strand, 5383204 - 5383055
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
|||||||| |||| ||||||||| ||| ||| || ||||||||||| |||||||| | ||| ||||| |||||||| ||| |||||||||||||||| |
|
|
| T |
5383204 |
gaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattaggcaaatttgagaagtctggggtctgcaccaggtaatgagaatgactaa |
5383105 |
T |
|
| Q |
134 |
gattgagaattttcagctgctccattctctgcaagaacagaaatattata |
183 |
Q |
| |
|
| || || |||||||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
5383104 |
ggtttaggattttcagtatctccatcctctgcaagaacataaatattata |
5383055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 5350272 - 5350157
Alignment:
| Q |
34 |
gaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaa |
133 |
Q |
| |
|
|||||||| |||| | | ||||| |||||||| || ||||||||||| ||||||| |||||||||||| |||| ||||||||| || ||||||||||| |
|
|
| T |
5350272 |
gaaacctcggacaacattggacaatctttgagtactagcttttcaagattaggcatgtatgaaaagtc--gggtgtgtgtcagacaacaagaatgactaa |
5350175 |
T |
|
| Q |
134 |
gattgagaattttcagct |
151 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
5350174 |
gatttagaattttcagct |
5350157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 5447011 - 5446897
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||| || || |||| ||| |||||| || ||||||||||||| | ||||| ||||| || ||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
5447011 |
tctttgagtactagtttttgaagattaggcgtgtttgaaaagtcagggctttgtgtgagatagtgcgaatggctaagattgagaatttttagcttctcca |
5446912 |
T |
|
| Q |
158 |
ttctctgcaagaaca |
172 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
5446911 |
tcctctgcaagaaca |
5446897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 5244094 - 5244187
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
|||||||| || ||||||||||| || | || |||||||||||| ||||| || |||||| ||||||||||||||||||| |||||||| |||| |
|
|
| T |
5244094 |
tctttgagtactagcttttcaagatttgacatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttttagct |
5244187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 36214018 - 36214186
Alignment:
| Q |
20 |
gtccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagata |
119 |
Q |
| |
|
|||||||||| |||||||||||||||| || ||||| ||| |||| || || |||||||||||||||| || |||||| || || |||| ||||||||| |
|
|
| T |
36214018 |
gtccaatactgtgggaaacctcagacaatcttggacaatctgtgagtactagtttttcaaggttaggcatgtttgaaaaatctggagtctttgtcagata |
36214117 |
T |
|
| Q |
120 |
atgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||| |
|
|
| T |
36214118 |
atgagaatgactaagattgagaattttcagcttttccagcctctgcaagaacagaaatgttataaagaa |
36214186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 34724827 - 34724906
Alignment:
| Q |
72 |
cttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||||||| || ||||||||||||||||| || || ||| ||| | |||||||||||||||||| |||| |||||||| |
|
|
| T |
34724827 |
cttttcaagatttggcaagtatgaaaagtctggtgtttgtttcaagttatgagaatgactaagattaagaaatttcagct |
34724906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 18935226 - 18935147
Alignment:
| Q |
72 |
cttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||||||| || ||||||| |||||||| ||||| ||| |||| | |||||||||||||||||| |||| ||||||| |
|
|
| T |
18935226 |
cttttcaagattcggcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaaacttcagct |
18935147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 8877473 - 8877333
Alignment:
| Q |
48 |
cctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttc |
147 |
Q |
| |
|
||||||||| |||||||| || ||||||||||| |||||||||| | ||||||| || || |||||||||| |||||| || ||||||||||||||||| |
|
|
| T |
8877473 |
cctcggacaatctttgagtactagcttttcaagattaggcaagtttaaaaagtctggagtttgtgtcagatgatgagagtggctaagattgagaattttt |
8877374 |
T |
|
| Q |
148 |
agctgctccattctctgcaagaacagaaatattatagagaa |
188 |
Q |
| |
|
|||| |||||| ||||||||||||| |||| | |||||||| |
|
|
| T |
8877373 |
agcttctccatcctctgcaagaacataaatttgatagagaa |
8877333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 9121 - 9252
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagct |
151 |
Q |
| |
|
||||| |||||||| || ||||||||||| |||||||| ||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9121 |
ggacaatctttgagtactagcttttcaagattaggcaaatatgaaaagtctggggtatgcatcaaataatgagaatgactaagattgagaattttcagct |
9220 |
T |
|
| Q |
152 |
gctccattctctgcaagaacagaaatattata |
183 |
Q |
| |
|
| ||| |||||||||| || |||||||||| |
|
|
| T |
9221 |
tcgccagcctctgcaagaccataaatattata |
9252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 47987079 - 47987206
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||| || |||||||| || ||||||| || |||||||||| || | |||| |||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
47987079 |
tctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttcca |
47987178 |
T |
|
| Q |
158 |
ttctctgcaagaacagaaatattataga |
185 |
Q |
| |
|
| |||||||||||| ||| ||||||| |
|
|
| T |
47987179 |
tcttctgcaagaacatgaattttataga |
47987206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 47996366 - 47996493
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||| || |||||||| || ||||||| || |||||||||| || | |||| |||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
47996366 |
tctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttcca |
47996465 |
T |
|
| Q |
158 |
ttctctgcaagaacagaaatattataga |
185 |
Q |
| |
|
| |||||||||||| ||| ||||||| |
|
|
| T |
47996466 |
tcttctgcaagaacatgaattttataga |
47996493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 48005653 - 48005780
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||| || |||||||| || ||||||| || |||||||||| || | |||| |||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
48005653 |
tctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttcca |
48005752 |
T |
|
| Q |
158 |
ttctctgcaagaacagaaatattataga |
185 |
Q |
| |
|
| |||||||||||| ||| ||||||| |
|
|
| T |
48005753 |
tcttctgcaagaacatgaattttataga |
48005780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 48014938 - 48015065
Alignment:
| Q |
58 |
tctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctcca |
157 |
Q |
| |
|
|||||||| || |||||||| || ||||||| || |||||||||| || | |||| |||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
48014938 |
tctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttcca |
48015037 |
T |
|
| Q |
158 |
ttctctgcaagaacagaaatattataga |
185 |
Q |
| |
|
| |||||||||||| ||| ||||||| |
|
|
| T |
48015038 |
tcttctgcaagaacatgaattttataga |
48015065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 9581 - 9456
Alignment:
| Q |
21 |
tccaatactttgggaaacctcagacagcctcggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataa |
120 |
Q |
| |
|
|||||| || ||||| ||| |||||| || |||||||||||||| || ||||||||||| || |||| ||||| ||||| || || | |||| || |
|
|
| T |
9581 |
tccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatatatgagaagtctggagtttcagtcaaatcc |
9482 |
T |
|
| Q |
121 |
tgagaatgactaagattgagaatttt |
146 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
9481 |
tgagaatgactaagattaagaatttt |
9456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 5047 - 5102
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
5047 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
5102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 6519 - 6464
Alignment:
| Q |
52 |
ggacagtctttgagcaccagcttttcaaggttaggcaagtatgaaaagtcaggggt |
107 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||| | |||||||||| ||||| |
|
|
| T |
6519 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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