View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1863_low_60 (Length: 311)
Name: NF1863_low_60
Description: NF1863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1863_low_60 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 17 - 301
Target Start/End: Original strand, 708757 - 709041
Alignment:
| Q |
17 |
ttgtgctgttatttttggggtttggcattcctcgaccttcaataaccttctcaaaaccaggatatatgacagtattctcaaatgctaaattcattttttc |
116 |
Q |
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| T |
708757 |
ttgtgctgttatttttggggtttggcattccttgaccttcaataaccttctcaaaaccaggatatatgacagtattctcaaatgctaaattcattttttc |
708856 |
T |
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| Q |
117 |
acctcctaatagaggaattggcatggagcaccctgcaagtgcatctaatagaggaatcctaacacaaatttccaaatcatttccatttctgctaaacaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
708857 |
acctcctaatagaggaattggcatggagcaccctgcaagtgcatctaatagaggaatcctaacacaaatttccaaatcatttccatttctgctaaacaaa |
708956 |
T |
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| Q |
217 |
tggtgttccttttcatcaattaagaatactatatcagcagggaggtaaccaggtttctcatcacctactccctcaaatgtaatct |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
708957 |
tggtgttccttttcatcaattaagaatactatatcagcagggaggtaaccaggtttctcatcacctactccctcaaatgtaatct |
709041 |
T |
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